0.020227
0.006615
0.008827
0.000000
0.020979
0.005180
0.000000
0.000000
0.017040
0.00000
0.00000
0.00000
CIS PROLINE - PRO A 73
CIS PROLINE - PRO B 73
Kostrewa, D.
Winkler, F.K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
96.54
109.05
108.11
49.440
50.150
63.950
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
O
N
89
N
P
N
90
N
O
N
91
N
O
N
92
N
O
N
93
N
C
N
94
R
C
N
95
N
O
N
96
S
C
N
97
N
O
N
98
N
C
N
99
R
C
Y
100
N
N
Y
101
N
C
Y
102
N
N
Y
103
N
C
Y
104
N
C
N
105
N
N
Y
106
N
N
Y
107
N
C
Y
108
N
N
Y
109
N
C
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
O
N
125
N
P
N
126
N
O
N
127
N
O
N
128
N
O
N
129
N
C
N
130
R
C
N
131
N
O
N
132
S
C
N
133
N
O
N
134
N
C
N
135
R
C
N
136
N
N
N
137
N
C
N
138
N
O
N
139
N
N
N
140
N
C
N
141
N
N
N
142
N
C
N
143
N
C
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
P
N
160
N
O
N
161
N
O
N
162
N
O
N
163
N
C
N
164
R
C
N
165
N
O
N
166
S
C
N
167
N
O
N
168
N
C
N
169
R
C
Y
170
N
N
Y
171
N
C
Y
172
N
N
Y
173
N
C
N
174
N
C
N
175
N
O
N
176
N
N
N
177
N
C
N
178
N
N
N
179
N
N
Y
180
N
C
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
O
N
196
N
P
N
197
N
O
N
198
N
O
N
199
N
O
N
200
N
C
N
201
R
C
N
202
N
O
N
203
S
C
N
204
N
O
N
205
N
C
N
206
R
C
N
207
N
N
N
208
N
C
N
209
N
O
N
210
N
N
N
211
N
C
N
212
N
O
N
213
N
C
N
214
N
C
N
215
N
C
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
N
N
232
S
C
N
233
N
C
N
234
N
O
N
235
N
C
N
236
N
C
N
237
N
C
N
238
N
O
N
239
N
N
N
240
N
O
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
N
N
252
S
C
N
253
N
C
N
254
N
O
N
255
N
C
N
256
N
C
N
257
N
C
N
258
N
O
N
259
N
O
N
260
N
O
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
N
N
271
N
C
N
272
N
C
N
273
N
O
N
274
N
O
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
N
N
281
S
C
N
282
N
C
N
283
N
O
N
284
N
C
Y
285
N
C
Y
286
N
N
Y
287
N
C
Y
288
N
C
Y
289
N
N
N
290
N
O
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
O
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
S
C
N
309
N
C
N
310
N
C
N
311
N
C
N
312
N
O
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
N
N
327
S
C
N
328
N
C
N
329
N
O
N
330
N
C
N
331
N
C
N
332
N
C
N
333
N
C
N
334
N
O
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
N
353
N
C
N
354
N
C
N
355
N
C
N
356
N
N
N
357
N
O
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
N
N
374
S
C
N
375
N
C
N
376
N
O
N
377
N
C
Y
378
N
C
Y
379
N
C
Y
380
N
C
Y
381
N
C
Y
382
N
C
Y
383
N
C
N
384
N
O
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
N
N
397
S
C
N
398
N
C
N
399
N
O
N
400
N
C
N
401
N
C
N
402
N
C
N
403
N
O
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
N
N
414
S
C
N
415
N
C
N
416
N
O
N
417
N
C
N
418
N
O
N
419
N
O
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
N
N
428
S
C
N
429
N
C
N
430
N
O
N
431
R
C
N
432
N
O
N
433
N
C
N
434
N
O
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
N
N
445
S
C
N
446
N
C
N
447
N
O
N
448
N
C
Y
449
N
C
Y
450
N
C
Y
451
N
C
Y
452
N
N
Y
453
N
C
Y
454
N
C
Y
455
N
C
Y
456
N
C
Y
457
N
C
N
458
N
O
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
H
N
471
N
N
N
472
S
C
N
473
N
C
N
474
N
O
N
475
N
C
Y
476
N
C
Y
477
N
C
Y
478
N
C
Y
479
N
C
Y
480
N
C
Y
481
N
C
N
482
N
O
N
483
N
O
N
484
N
H
N
485
N
H
N
486
N
H
N
487
N
H
N
488
N
H
N
489
N
H
N
490
N
H
N
491
N
H
N
492
N
H
N
493
N
H
N
494
N
H
N
495
N
N
N
496
S
C
N
497
N
C
N
498
N
O
N
499
N
C
N
500
N
C
N
501
N
C
N
502
N
O
N
503
N
H
N
504
N
H
N
505
N
H
N
506
N
H
N
507
N
H
N
508
N
H
N
509
N
H
N
510
N
H
N
511
N
H
N
512
N
H
N
513
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
doub
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
Y
106
N
sing
Y
107
N
sing
Y
108
N
doub
N
109
N
sing
Y
110
N
sing
Y
111
N
sing
Y
112
N
doub
N
113
N
sing
Y
114
N
doub
N
115
N
sing
N
116
N
sing
Y
117
N
sing
Y
118
N
doub
N
119
N
sing
Y
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
doub
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
Y
179
N
sing
Y
180
N
sing
Y
181
N
doub
N
182
N
sing
Y
183
N
sing
N
184
N
sing
Y
185
N
doub
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
doub
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
doub
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
doub
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
doub
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
doub
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
doub
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
doub
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
doub
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
doub
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
Y
289
N
sing
Y
290
N
doub
Y
291
N
doub
N
292
N
sing
Y
293
N
sing
N
294
N
sing
Y
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
doub
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
doub
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
doub
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
doub
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
Y
378
N
doub
Y
379
N
sing
Y
380
N
sing
N
381
N
sing
Y
382
N
doub
N
383
N
sing
Y
384
N
doub
N
385
N
sing
Y
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
doub
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
doub
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
doub
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
doub
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
Y
447
N
doub
Y
448
N
sing
Y
449
N
sing
N
450
N
sing
Y
451
N
doub
Y
452
N
sing
Y
453
N
sing
N
454
N
sing
Y
455
N
sing
Y
456
N
doub
N
457
N
sing
Y
458
N
doub
N
459
N
sing
Y
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
N
469
N
sing
N
470
N
doub
N
471
N
sing
N
472
N
sing
N
473
N
sing
N
474
N
sing
Y
475
N
doub
Y
476
N
sing
Y
477
N
sing
N
478
N
sing
Y
479
N
doub
N
480
N
sing
Y
481
N
doub
N
482
N
sing
Y
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
sing
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
N
494
N
doub
N
495
N
sing
N
496
N
sing
N
497
N
sing
N
498
N
sing
N
499
N
sing
N
500
N
sing
N
501
N
sing
N
502
N
sing
N
503
N
sing
N
504
N
sing
N
505
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
34
683
696
10.1021/bi00002a036
7819264
Mg2+ binding to the active site of EcoRV endonuclease: a crystallographic study of complexes with substrate and product DNA at 2 A resolution.
1995
UK
Embo J.
EMJODG
0897
0261-4189
12
1781
The Crystal Structure of EcoRV Endonuclease and of its Complexes with Cognate and Noncognate DNA Fragments
1993
UK
Curr.Opin.Struct.Biol.
COSBEF
0801
0959-440X
2
93
Structure and Function of Restriction Endonucleases
1992
10.2210/pdb1rva/pdb
pdb_00001rva
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
3356.235
DNA (5'-D(*AP*AP*AP*GP*AP*TP*AP*TP*CP*TP*T)-3')
2
syn
polymer
28559.158
PROTEIN (ECO RV (E.C.3.1.21.4))
2
man
polymer
18.015
water
266
nat
water
no
no
(DA)(DA)(DA)(DG)(DA)(DT)(DA)(DT)(DC)(DT)(DT)
AAAGATATCTT
C,D
polydeoxyribonucleotide
no
no
SLRSDLINALYDENQKYDVCGIISAEGKIYPLGSDTKVLSTIFELFSRPIINKIAEKHGYIVEEPKQQNHYPDFTLYKPS
EPNKKIAIDIKTTYTNKENEKIKFTLGGYTSFIRNNTKNIVYPFDQYIAHWIIGYVYTRVATRKSSLKTYNINELNEIPK
PYKGVKVFLQDKWVIAGDLAGSGNTTNIGSIHAHYKDFVEGKGIFDSEDEFLDYWRNYERTSQLRNDKYNNISEYRNWIY
RGRK
SLRSDLINALYDENQKYDVCGIISAEGKIYPLGSDTKVLSTIFELFSRPIINKIAEKHGYIVEEPKQQNHYPDFTLYKPS
EPNKKIAIDIKTTYTNKENEKIKFTLGGYTSFIRNNTKNIVYPFDQYIAHWIIGYVYTRVATRKSSLKTYNINELNEIPK
PYKGVKVFLQDKWVIAGDLAGSGNTTNIGSIHAHYKDFVEGKGIFDSEDEFLDYWRNYERTSQLRNDKYNNISEYRNWIY
RGRK
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Escherichia
Escherichia
sample
562
Escherichia coli
562
Escherichia coli
2.16
43.01
-7.787
1
20
C
2
D
11
1.773
C_DA2:DT11_D
1
-13.715
0.103
-0.389
-0.272
-2.554
1
20
C
3
D
10
1.144
C_DA3:DT10_D
2
-7.579
0.154
-0.011
-0.167
9.824
1
19
C
4
D
9
0.017
C_DG4:DC9_D
3
-10.713
-0.025
0.270
-0.156
-0.395
1
20
C
5
D
8
2.166
C_DA5:DT8_D
4
-1.347
-0.089
0.095
-0.122
10.801
1
20
C
6
D
7
2.161
C_DT6:DA7_D
5
-2.894
-0.090
-0.064
-0.098
-9.641
1
20
C
7
D
6
0.462
C_DA7:DT6_D
6
-1.035
0.063
-0.031
-0.140
-0.379
1
20
C
8
D
5
1.481
C_DT8:DA5_D
7
0.869
-0.028
0.148
-0.121
-10.484
1
19
C
9
D
4
-0.391
C_DC9:DG4_D
8
-10.820
-0.023
0.376
-0.105
3.243
1
20
C
10
D
3
1.614
C_DT10:DA3_D
9
-9.093
-0.045
-0.069
-0.065
11.511
1
20
C
11
D
2
3.240
C_DT11:DA2_D
10
-12.005
0.312
-0.237
-0.216
3.201
32.324
C
C
2
3
0.683
D
D
11
10
3.225
0.380
0.105
0.483
CC_DA2DA3:DT10DT11_DD
1
-3.567
6.420
32.129
0.802
-0.810
3.143
29.593
C
C
3
4
-0.537
D
D
10
9
3.175
-0.274
0.519
-0.110
CC_DA3DG4:DC9DT10_DD
2
-1.638
3.209
29.547
-0.160
-1.351
3.854
41.145
C
C
4
5
-17.154
D
D
9
8
3.812
-11.894
-0.068
-0.693
CC_DG4DA5:DT8DC9_DD
3
-1.818
2.621
39.420
0.558
-0.139
3.085
28.436
C
C
5
6
6.525
D
D
8
7
3.268
3.198
-0.199
-1.387
CC_DA5DT6:DA7DT8_DD
4
1.104
-2.253
28.239
-3.539
0.652
0.976
54.063
C
C
6
7
60.783
D
D
7
6
4.084
46.739
-0.074
-1.412
CC_DT6DA7:DT6DA7_DD
5
-0.180
0.234
27.970
-4.632
0.070
3.211
28.751
C
C
7
8
4.221
D
D
6
5
3.350
2.093
0.410
-1.361
CC_DA7DT8:DA5DT6_DD
6
-1.895
3.822
28.615
-3.213
-1.253
3.854
40.786
C
C
8
9
-15.927
D
D
5
4
3.765
-10.966
0.114
-0.843
CC_DT8DC9:DG4DA5_DD
7
2.802
-4.070
39.248
0.228
0.204
3.048
30.457
C
C
9
10
3.375
D
D
4
3
3.118
1.770
-0.547
-0.118
CC_DC9DT10:DA3DG4_DD
8
2.676
-5.103
30.291
-0.558
1.547
3.220
31.305
C
C
10
11
12.711
D
D
3
2
3.194
6.791
-0.107
0.632
CC_DT10DT11:DA2DA3_DD
9
3.763
-7.043
30.350
-0.107
0.906
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
1
0
1995-01-26
1
1
2008-05-22
1
2
2011-07-13
1
3
2024-02-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
BNL
Y
BNL
1994-10-21
REL
REL
HOH
water
HOH
13
3
HOH
HOH
13
C
HOH
14
3
HOH
HOH
14
C
HOH
17
3
HOH
HOH
17
C
HOH
54
3
HOH
HOH
54
C
HOH
82
3
HOH
HOH
82
C
HOH
85
3
HOH
HOH
85
C
HOH
95
3
HOH
HOH
95
C
HOH
97
3
HOH
HOH
97
C
HOH
106
3
HOH
HOH
106
C
HOH
110
3
HOH
HOH
110
C
HOH
127
3
HOH
HOH
127
C
HOH
154
3
HOH
HOH
154
C
HOH
194
3
HOH
HOH
194
C
HOH
206
3
HOH
HOH
206
C
HOH
212
3
HOH
HOH
212
C
HOH
216
3
HOH
HOH
216
C
HOH
220
3
HOH
HOH
220
C
HOH
240
3
HOH
HOH
240
C
HOH
2
3
HOH
HOH
12
D
HOH
38
3
HOH
HOH
13
D
HOH
57
3
HOH
HOH
14
D
HOH
62
3
HOH
HOH
15
D
HOH
63
3
HOH
HOH
16
D
HOH
64
3
HOH
HOH
17
D
HOH
66
3
HOH
HOH
18
D
HOH
90
3
HOH
HOH
19
D
HOH
120
3
HOH
HOH
20
D
HOH
134
3
HOH
HOH
21
D
HOH
135
3
HOH
HOH
22
D
HOH
151
3
HOH
HOH
23
D
HOH
157
3
HOH
HOH
24
D
HOH
162
3
HOH
HOH
25
D
HOH
171
3
HOH
HOH
26
D
HOH
181
3
HOH
HOH
27
D
HOH
183
3
HOH
HOH
28
D
HOH
185
3
HOH
HOH
29
D
HOH
186
3
HOH
HOH
30
D
HOH
188
3
HOH
HOH
31
D
HOH
189
3
HOH
HOH
32
D
HOH
197
3
HOH
HOH
33
D
HOH
208
3
HOH
HOH
34
D
HOH
274
3
HOH
HOH
35
D
HOH
275
3
HOH
HOH
36
D
HOH
4
3
HOH
HOH
246
A
HOH
5
3
HOH
HOH
247
A
HOH
8
3
HOH
HOH
248
A
HOH
10
3
HOH
HOH
249
A
HOH
15
3
HOH
HOH
250
A
HOH
16
3
HOH
HOH
251
A
HOH
21
3
HOH
HOH
252
A
HOH
22
3
HOH
HOH
253
A
HOH
25
3
HOH
HOH
254
A
HOH
26
3
HOH
HOH
255
A
HOH
28
3
HOH
HOH
256
A
HOH
29
3
HOH
HOH
257
A
HOH
30
3
HOH
HOH
258
A
HOH
31
3
HOH
HOH
259
A
HOH
34
3
HOH
HOH
260
A
HOH
35
3
HOH
HOH
261
A
HOH
43
3
HOH
HOH
262
A
HOH
45
3
HOH
HOH
263
A
HOH
46
3
HOH
HOH
264
A
HOH
47
3
HOH
HOH
265
A
HOH
49
3
HOH
HOH
266
A
HOH
50
3
HOH
HOH
267
A
HOH
51
3
HOH
HOH
268
A
HOH
52
3
HOH
HOH
269
A
HOH
53
3
HOH
HOH
270
A
HOH
55
3
HOH
HOH
271
A
HOH
58
3
HOH
HOH
272
A
HOH
61
3
HOH
HOH
273
A
HOH
65
3
HOH
HOH
274
A
HOH
68
3
HOH
HOH
275
A
HOH
69
3
HOH
HOH
276
A
HOH
70
3
HOH
HOH
277
A
HOH
78
3
HOH
HOH
278
A
HOH
79
3
HOH
HOH
279
A
HOH
81
3
HOH
HOH
280
A
HOH
83
3
HOH
HOH
281
A
HOH
84
3
HOH
HOH
282
A
HOH
86
3
HOH
HOH
283
A
HOH
91
3
HOH
HOH
284
A
HOH
92
3
HOH
HOH
285
A
HOH
93
3
HOH
HOH
286
A
HOH
96
3
HOH
HOH
287
A
HOH
98
3
HOH
HOH
288
A
HOH
99
3
HOH
HOH
289
A
HOH
100
3
HOH
HOH
290
A
HOH
102
3
HOH
HOH
291
A
HOH
103
3
HOH
HOH
292
A
HOH
104
3
HOH
HOH
293
A
HOH
108
3
HOH
HOH
294
A
HOH
114
3
HOH
HOH
295
A
HOH
115
3
HOH
HOH
296
A
HOH
117
3
HOH
HOH
297
A
HOH
123
3
HOH
HOH
298
A
HOH
124
3
HOH
HOH
299
A
HOH
132
3
HOH
HOH
300
A
HOH
136
3
HOH
HOH
301
A
HOH
139
3
HOH
HOH
302
A
HOH
140
3
HOH
HOH
303
A
HOH
141
3
HOH
HOH
304
A
HOH
142
3
HOH
HOH
305
A
HOH
144
3
HOH
HOH
306
A
HOH
146
3
HOH
HOH
307
A
HOH
147
3
HOH
HOH
308
A
HOH
153
3
HOH
HOH
309
A
HOH
155
3
HOH
HOH
310
A
HOH
156
3
HOH
HOH
311
A
HOH
158
3
HOH
HOH
312
A
HOH
159
3
HOH
HOH
313
A
HOH
160
3
HOH
HOH
314
A
HOH
167
3
HOH
HOH
315
A
HOH
169
3
HOH
HOH
316
A
HOH
174
3
HOH
HOH
317
A
HOH
177
3
HOH
HOH
318
A
HOH
178
3
HOH
HOH
319
A
HOH
180
3
HOH
HOH
320
A
HOH
182
3
HOH
HOH
321
A
HOH
184
3
HOH
HOH
322
A
HOH
195
3
HOH
HOH
323
A
HOH
196
3
HOH
HOH
324
A
HOH
198
3
HOH
HOH
325
A
HOH
199
3
HOH
HOH
326
A
HOH
201
3
HOH
HOH
327
A
HOH
202
3
HOH
HOH
328
A
HOH
203
3
HOH
HOH
329
A
HOH
204
3
HOH
HOH
330
A
HOH
205
3
HOH
HOH
331
A
HOH
210
3
HOH
HOH
332
A
HOH
211
3
HOH
HOH
333
A
HOH
213
3
HOH
HOH
334
A
HOH
215
3
HOH
HOH
335
A
HOH
217
3
HOH
HOH
336
A
HOH
219
3
HOH
HOH
337
A
HOH
221
3
HOH
HOH
338
A
HOH
223
3
HOH
HOH
339
A
HOH
224
3
HOH
HOH
340
A
HOH
225
3
HOH
HOH
341
A
HOH
226
3
HOH
HOH
342
A
HOH
227
3
HOH
HOH
343
A
HOH
228
3
HOH
HOH
344
A
HOH
229
3
HOH
HOH
345
A
HOH
232
3
HOH
HOH
346
A
HOH
236
3
HOH
HOH
347
A
HOH
237
3
HOH
HOH
348
A
HOH
241
3
HOH
HOH
349
A
HOH
242
3
HOH
HOH
350
A
HOH
248
3
HOH
HOH
351
A
HOH
255
3
HOH
HOH
352
A
HOH
257
3
HOH
HOH
353
A
HOH
258
3
HOH
HOH
354
A
HOH
261
3
HOH
HOH
355
A
HOH
262
3
HOH
HOH
356
A
HOH
263
3
HOH
HOH
357
A
HOH
266
3
HOH
HOH
358
A
HOH
267
3
HOH
HOH
359
A
HOH
268
3
HOH
HOH
360
A
HOH
276
3
HOH
HOH
361
A
HOH
1
3
HOH
HOH
246
B
HOH
3
3
HOH
HOH
247
B
HOH
6
3
HOH
HOH
248
B
HOH
7
3
HOH
HOH
249
B
HOH
9
3
HOH
HOH
250
B
HOH
11
3
HOH
HOH
251
B
HOH
12
3
HOH
HOH
252
B
HOH
18
3
HOH
HOH
253
B
HOH
19
3
HOH
HOH
254
B
HOH
20
3
HOH
HOH
255
B
HOH
23
3
HOH
HOH
256
B
HOH
24
3
HOH
HOH
257
B
HOH
27
3
HOH
HOH
258
B
HOH
32
3
HOH
HOH
259
B
HOH
33
3
HOH
HOH
260
B
HOH
36
3
HOH
HOH
261
B
HOH
37
3
HOH
HOH
262
B
HOH
39
3
HOH
HOH
263
B
HOH
40
3
HOH
HOH
264
B
HOH
41
3
HOH
HOH
265
B
HOH
42
3
HOH
HOH
266
B
HOH
44
3
HOH
HOH
267
B
HOH
48
3
HOH
HOH
268
B
HOH
56
3
HOH
HOH
269
B
HOH
59
3
HOH
HOH
270
B
HOH
60
3
HOH
HOH
271
B
HOH
67
3
HOH
HOH
272
B
HOH
71
3
HOH
HOH
273
B
HOH
72
3
HOH
HOH
274
B
HOH
73
3
HOH
HOH
275
B
HOH
74
3
HOH
HOH
276
B
HOH
75
3
HOH
HOH
277
B
HOH
76
3
HOH
HOH
278
B
HOH
77
3
HOH
HOH
279
B
HOH
80
3
HOH
HOH
280
B
HOH
87
3
HOH
HOH
281
B
HOH
88
3
HOH
HOH
282
B
HOH
89
3
HOH
HOH
283
B
HOH
94
3
HOH
HOH
284
B
HOH
101
3
HOH
HOH
285
B
HOH
105
3
HOH
HOH
286
B
HOH
107
3
HOH
HOH
287
B
HOH
109
3
HOH
HOH
288
B
HOH
111
3
HOH
HOH
289
B
HOH
112
3
HOH
HOH
290
B
HOH
113
3
HOH
HOH
291
B
HOH
116
3
HOH
HOH
292
B
HOH
118
3
HOH
HOH
293
B
HOH
119
3
HOH
HOH
294
B
HOH
121
3
HOH
HOH
295
B
HOH
122
3
HOH
HOH
296
B
HOH
125
3
HOH
HOH
297
B
HOH
126
3
HOH
HOH
298
B
HOH
128
3
HOH
HOH
299
B
HOH
129
3
HOH
HOH
300
B
HOH
130
3
HOH
HOH
301
B
HOH
131
3
HOH
HOH
302
B
HOH
133
3
HOH
HOH
303
B
HOH
137
3
HOH
HOH
304
B
HOH
138
3
HOH
HOH
305
B
HOH
143
3
HOH
HOH
306
B
HOH
145
3
HOH
HOH
307
B
HOH
148
3
HOH
HOH
308
B
HOH
149
3
HOH
HOH
309
B
HOH
150
3
HOH
HOH
310
B
HOH
152
3
HOH
HOH
311
B
HOH
161
3
HOH
HOH
312
B
HOH
163
3
HOH
HOH
313
B
HOH
164
3
HOH
HOH
314
B
HOH
165
3
HOH
HOH
315
B
HOH
168
3
HOH
HOH
316
B
HOH
170
3
HOH
HOH
317
B
HOH
172
3
HOH
HOH
318
B
HOH
173
3
HOH
HOH
319
B
HOH
175
3
HOH
HOH
320
B
HOH
179
3
HOH
HOH
321
B
HOH
187
3
HOH
HOH
322
B
HOH
190
3
HOH
HOH
323
B
HOH
191
3
HOH
HOH
324
B
HOH
192
3
HOH
HOH
325
B
HOH
193
3
HOH
HOH
326
B
HOH
200
3
HOH
HOH
327
B
HOH
207
3
HOH
HOH
328
B
HOH
209
3
HOH
HOH
329
B
HOH
214
3
HOH
HOH
330
B
HOH
218
3
HOH
HOH
331
B
HOH
222
3
HOH
HOH
332
B
HOH
230
3
HOH
HOH
333
B
HOH
231
3
HOH
HOH
334
B
HOH
233
3
HOH
HOH
335
B
HOH
235
3
HOH
HOH
336
B
HOH
239
3
HOH
HOH
337
B
HOH
244
3
HOH
HOH
338
B
HOH
246
3
HOH
HOH
339
B
HOH
251
3
HOH
HOH
340
B
HOH
252
3
HOH
HOH
341
B
HOH
254
3
HOH
HOH
342
B
HOH
256
3
HOH
HOH
343
B
HOH
260
3
HOH
HOH
344
B
HOH
264
3
HOH
HOH
345
B
HOH
265
3
HOH
HOH
346
B
HOH
269
3
HOH
HOH
347
B
HOH
270
3
HOH
HOH
348
B
HOH
271
3
HOH
HOH
349
B
HOH
272
3
HOH
HOH
350
B
HOH
273
3
HOH
HOH
351
B
HOH
277
3
HOH
HOH
352
B
A
1
n
1
DA
1
C
A
2
n
2
DA
2
C
A
3
n
3
DA
3
C
G
4
n
4
DG
4
C
A
5
n
5
DA
5
C
T
6
n
6
DT
6
C
A
7
n
7
DA
7
C
T
8
n
8
DT
8
C
C
9
n
9
DC
9
C
T
10
n
10
DT
10
C
T
11
n
11
DT
11
C
A
1
n
1
DA
1
D
A
2
n
2
DA
2
D
A
3
n
3
DA
3
D
G
4
n
4
DG
4
D
A
5
n
5
DA
5
D
T
6
n
6
DT
6
D
A
7
n
7
DA
7
D
T
8
n
8
DT
8
D
C
9
n
9
DC
9
D
T
10
n
10
DT
10
D
T
11
n
11
DT
11
D
SER
2
n
1
SER
2
A
LEU
3
n
2
LEU
3
A
ARG
4
n
3
ARG
4
A
SER
5
n
4
SER
5
A
ASP
6
n
5
ASP
6
A
LEU
7
n
6
LEU
7
A
ILE
8
n
7
ILE
8
A
ASN
9
n
8
ASN
9
A
ALA
10
n
9
ALA
10
A
LEU
11
n
10
LEU
11
A
TYR
12
n
11
TYR
12
A
ASP
13
n
12
ASP
13
A
GLU
14
n
13
GLU
14
A
ASN
15
n
14
ASN
15
A
GLN
16
n
15
GLN
16
A
LYS
17
n
16
LYS
17
A
TYR
18
n
17
TYR
18
A
ASP
19
n
18
ASP
19
A
VAL
20
n
19
VAL
20
A
CYS
21
n
20
CYS
21
A
GLY
22
n
21
GLY
22
A
ILE
23
n
22
ILE
23
A
ILE
24
n
23
ILE
24
A
SER
25
n
24
SER
25
A
ALA
26
n
25
ALA
26
A
GLU
27
n
26
GLU
27
A
GLY
28
n
27
GLY
28
A
LYS
29
n
28
LYS
29
A
ILE
30
n
29
ILE
30
A
TYR
31
n
30
TYR
31
A
PRO
32
n
31
PRO
32
A
LEU
33
n
32
LEU
33
A
GLY
34
n
33
GLY
34
A
SER
35
n
34
SER
35
A
ASP
36
n
35
ASP
36
A
THR
37
n
36
THR
37
A
LYS
38
n
37
LYS
38
A
VAL
39
n
38
VAL
39
A
LEU
40
n
39
LEU
40
A
SER
41
n
40
SER
41
A
THR
42
n
41
THR
42
A
ILE
43
n
42
ILE
43
A
PHE
44
n
43
PHE
44
A
GLU
45
n
44
GLU
45
A
LEU
46
n
45
LEU
46
A
PHE
47
n
46
PHE
47
A
SER
48
n
47
SER
48
A
ARG
49
n
48
ARG
49
A
PRO
50
n
49
PRO
50
A
ILE
51
n
50
ILE
51
A
ILE
52
n
51
ILE
52
A
ASN
53
n
52
ASN
53
A
LYS
54
n
53
LYS
54
A
ILE
55
n
54
ILE
55
A
ALA
56
n
55
ALA
56
A
GLU
57
n
56
GLU
57
A
LYS
58
n
57
LYS
58
A
HIS
59
n
58
HIS
59
A
GLY
60
n
59
GLY
60
A
TYR
61
n
60
TYR
61
A
ILE
62
n
61
ILE
62
A
VAL
63
n
62
VAL
63
A
GLU
64
n
63
GLU
64
A
GLU
65
n
64
GLU
65
A
PRO
66
n
65
PRO
66
A
LYS
67
n
66
LYS
67
A
GLN
68
n
67
GLN
68
A
GLN
69
n
68
GLN
69
A
ASN
70
n
69
ASN
70
A
HIS
71
n
70
HIS
71
A
TYR
72
n
71
TYR
72
A
PRO
73
n
72
PRO
73
A
ASP
74
n
73
ASP
74
A
PHE
75
n
74
PHE
75
A
THR
76
n
75
THR
76
A
LEU
77
n
76
LEU
77
A
TYR
78
n
77
TYR
78
A
LYS
79
n
78
LYS
79
A
PRO
80
n
79
PRO
80
A
SER
81
n
80
SER
81
A
GLU
82
n
81
GLU
82
A
PRO
83
n
82
PRO
83
A
ASN
84
n
83
ASN
84
A
LYS
85
n
84
LYS
85
A
LYS
86
n
85
LYS
86
A
ILE
87
n
86
ILE
87
A
ALA
88
n
87
ALA
88
A
ILE
89
n
88
ILE
89
A
ASP
90
n
89
ASP
90
A
ILE
91
n
90
ILE
91
A
LYS
92
n
91
LYS
92
A
THR
93
n
92
THR
93
A
THR
94
n
93
THR
94
A
TYR
95
n
94
TYR
95
A
THR
96
n
95
THR
96
A
ASN
97
n
96
ASN
97
A
LYS
98
n
97
LYS
98
A
GLU
99
n
98
GLU
99
A
ASN
100
n
99
ASN
100
A
GLU
101
n
100
GLU
101
A
LYS
102
n
101
LYS
102
A
ILE
103
n
102
ILE
103
A
LYS
104
n
103
LYS
104
A
PHE
105
n
104
PHE
105
A
THR
106
n
105
THR
106
A
LEU
107
n
106
LEU
107
A
GLY
108
n
107
GLY
108
A
GLY
109
n
108
GLY
109
A
TYR
110
n
109
TYR
110
A
THR
111
n
110
THR
111
A
SER
112
n
111
SER
112
A
PHE
113
n
112
PHE
113
A
ILE
114
n
113
ILE
114
A
ARG
115
n
114
ARG
115
A
ASN
116
n
115
ASN
116
A
ASN
117
n
116
ASN
117
A
THR
118
n
117
THR
118
A
LYS
119
n
118
LYS
119
A
ASN
120
n
119
ASN
120
A
ILE
121
n
120
ILE
121
A
VAL
122
n
121
VAL
122
A
TYR
123
n
122
TYR
123
A
PRO
124
n
123
PRO
124
A
PHE
125
n
124
PHE
125
A
ASP
126
n
125
ASP
126
A
GLN
127
n
126
GLN
127
A
TYR
128
n
127
TYR
128
A
ILE
129
n
128
ILE
129
A
ALA
130
n
129
ALA
130
A
HIS
131
n
130
HIS
131
A
TRP
132
n
131
TRP
132
A
ILE
133
n
132
ILE
133
A
ILE
134
n
133
ILE
134
A
GLY
135
n
134
GLY
135
A
TYR
136
n
135
TYR
136
A
VAL
137
n
136
VAL
137
A
TYR
138
n
137
TYR
138
A
THR
139
n
138
THR
139
A
ARG
140
n
139
ARG
140
A
VAL
141
n
140
VAL
141
A
ALA
142
n
141
ALA
142
A
THR
143
n
142
THR
143
A
ARG
144
n
143
ARG
144
A
LYS
145
n
144
LYS
145
A
SER
146
n
145
SER
146
A
SER
147
n
146
SER
147
A
LEU
148
n
147
LEU
148
A
LYS
149
n
148
LYS
149
A
THR
150
n
149
THR
150
A
TYR
151
n
150
TYR
151
A
ASN
152
n
151
ASN
152
A
ILE
153
n
152
ILE
153
A
ASN
154
n
153
ASN
154
A
GLU
155
n
154
GLU
155
A
LEU
156
n
155
LEU
156
A
ASN
157
n
156
ASN
157
A
GLU
158
n
157
GLU
158
A
ILE
159
n
158
ILE
159
A
PRO
160
n
159
PRO
160
A
LYS
161
n
160
LYS
161
A
PRO
162
n
161
PRO
162
A
TYR
163
n
162
TYR
163
A
LYS
164
n
163
LYS
164
A
GLY
165
n
164
GLY
165
A
VAL
166
n
165
VAL
166
A
LYS
167
n
166
LYS
167
A
VAL
168
n
167
VAL
168
A
PHE
169
n
168
PHE
169
A
LEU
170
n
169
LEU
170
A
GLN
171
n
170
GLN
171
A
ASP
172
n
171
ASP
172
A
LYS
173
n
172
LYS
173
A
TRP
174
n
173
TRP
174
A
VAL
175
n
174
VAL
175
A
ILE
176
n
175
ILE
176
A
ALA
177
n
176
ALA
177
A
GLY
178
n
177
GLY
178
A
ASP
179
n
178
ASP
179
A
LEU
180
n
179
LEU
180
A
ALA
181
n
180
ALA
181
A
GLY
182
n
181
GLY
182
A
SER
183
n
182
SER
183
A
GLY
184
n
183
GLY
184
A
ASN
185
n
184
ASN
185
A
THR
186
n
185
THR
186
A
THR
187
n
186
THR
187
A
ASN
188
n
187
ASN
188
A
ILE
189
n
188
ILE
189
A
GLY
190
n
189
GLY
190
A
SER
191
n
190
SER
191
A
ILE
192
n
191
ILE
192
A
HIS
193
n
192
HIS
193
A
ALA
194
n
193
ALA
194
A
HIS
195
n
194
HIS
195
A
TYR
196
n
195
TYR
196
A
LYS
197
n
196
LYS
197
A
ASP
198
n
197
ASP
198
A
PHE
199
n
198
PHE
199
A
VAL
200
n
199
VAL
200
A
GLU
201
n
200
GLU
201
A
GLY
202
n
201
GLY
202
A
LYS
203
n
202
LYS
203
A
GLY
204
n
203
GLY
204
A
ILE
205
n
204
ILE
205
A
PHE
206
n
205
PHE
206
A
ASP
207
n
206
ASP
207
A
SER
208
n
207
SER
208
A
GLU
209
n
208
GLU
209
A
ASP
210
n
209
ASP
210
A
GLU
211
n
210
GLU
211
A
PHE
212
n
211
PHE
212
A
LEU
213
n
212
LEU
213
A
ASP
214
n
213
ASP
214
A
TYR
215
n
214
TYR
215
A
TRP
216
n
215
TRP
216
A
ARG
217
n
216
ARG
217
A
ASN
218
n
217
ASN
218
A
TYR
219
n
218
TYR
219
A
GLU
220
n
219
GLU
220
A
ARG
221
n
220
ARG
221
A
THR
222
n
221
THR
222
A
SER
223
n
222
SER
223
A
GLN
224
n
223
GLN
224
A
LEU
225
n
224
LEU
225
A
ARG
226
n
225
ARG
226
A
ASN
227
n
226
ASN
227
A
ASP
228
n
227
ASP
228
A
LYS
229
n
228
LYS
229
A
TYR
230
n
229
TYR
230
A
ASN
231
n
230
ASN
231
A
ASN
232
n
231
ASN
232
A
ILE
233
n
232
ILE
233
A
SER
234
n
233
SER
234
A
GLU
235
n
234
GLU
235
A
TYR
236
n
235
TYR
236
A
ARG
237
n
236
ARG
237
A
ASN
238
n
237
ASN
238
A
TRP
239
n
238
TRP
239
A
ILE
240
n
239
ILE
240
A
TYR
241
n
240
TYR
241
A
ARG
242
n
241
ARG
242
A
GLY
243
n
242
GLY
243
A
ARG
244
n
243
ARG
244
A
LYS
245
n
244
LYS
245
A
SER
2
n
1
SER
2
B
LEU
3
n
2
LEU
3
B
ARG
4
n
3
ARG
4
B
SER
5
n
4
SER
5
B
ASP
6
n
5
ASP
6
B
LEU
7
n
6
LEU
7
B
ILE
8
n
7
ILE
8
B
ASN
9
n
8
ASN
9
B
ALA
10
n
9
ALA
10
B
LEU
11
n
10
LEU
11
B
TYR
12
n
11
TYR
12
B
ASP
13
n
12
ASP
13
B
GLU
14
n
13
GLU
14
B
ASN
15
n
14
ASN
15
B
GLN
16
n
15
GLN
16
B
LYS
17
n
16
LYS
17
B
TYR
18
n
17
TYR
18
B
ASP
19
n
18
ASP
19
B
VAL
20
n
19
VAL
20
B
CYS
21
n
20
CYS
21
B
GLY
22
n
21
GLY
22
B
ILE
23
n
22
ILE
23
B
ILE
24
n
23
ILE
24
B
SER
25
n
24
SER
25
B
ALA
26
n
25
ALA
26
B
GLU
27
n
26
GLU
27
B
GLY
28
n
27
GLY
28
B
LYS
29
n
28
LYS
29
B
ILE
30
n
29
ILE
30
B
TYR
31
n
30
TYR
31
B
PRO
32
n
31
PRO
32
B
LEU
33
n
32
LEU
33
B
GLY
34
n
33
GLY
34
B
SER
35
n
34
SER
35
B
ASP
36
n
35
ASP
36
B
THR
37
n
36
THR
37
B
LYS
38
n
37
LYS
38
B
VAL
39
n
38
VAL
39
B
LEU
40
n
39
LEU
40
B
SER
41
n
40
SER
41
B
THR
42
n
41
THR
42
B
ILE
43
n
42
ILE
43
B
PHE
44
n
43
PHE
44
B
GLU
45
n
44
GLU
45
B
LEU
46
n
45
LEU
46
B
PHE
47
n
46
PHE
47
B
SER
48
n
47
SER
48
B
ARG
49
n
48
ARG
49
B
PRO
50
n
49
PRO
50
B
ILE
51
n
50
ILE
51
B
ILE
52
n
51
ILE
52
B
ASN
53
n
52
ASN
53
B
LYS
54
n
53
LYS
54
B
ILE
55
n
54
ILE
55
B
ALA
56
n
55
ALA
56
B
GLU
57
n
56
GLU
57
B
LYS
58
n
57
LYS
58
B
HIS
59
n
58
HIS
59
B
GLY
60
n
59
GLY
60
B
TYR
61
n
60
TYR
61
B
ILE
62
n
61
ILE
62
B
VAL
63
n
62
VAL
63
B
GLU
64
n
63
GLU
64
B
GLU
65
n
64
GLU
65
B
PRO
66
n
65
PRO
66
B
LYS
67
n
66
LYS
67
B
GLN
68
n
67
GLN
68
B
GLN
69
n
68
GLN
69
B
ASN
70
n
69
ASN
70
B
HIS
71
n
70
HIS
71
B
TYR
72
n
71
TYR
72
B
PRO
73
n
72
PRO
73
B
ASP
74
n
73
ASP
74
B
PHE
75
n
74
PHE
75
B
THR
76
n
75
THR
76
B
LEU
77
n
76
LEU
77
B
TYR
78
n
77
TYR
78
B
LYS
79
n
78
LYS
79
B
PRO
80
n
79
PRO
80
B
SER
81
n
80
SER
81
B
GLU
82
n
81
GLU
82
B
PRO
83
n
82
PRO
83
B
ASN
84
n
83
ASN
84
B
LYS
85
n
84
LYS
85
B
LYS
86
n
85
LYS
86
B
ILE
87
n
86
ILE
87
B
ALA
88
n
87
ALA
88
B
ILE
89
n
88
ILE
89
B
ASP
90
n
89
ASP
90
B
ILE
91
n
90
ILE
91
B
LYS
92
n
91
LYS
92
B
THR
93
n
92
THR
93
B
THR
94
n
93
THR
94
B
TYR
95
n
94
TYR
95
B
THR
96
n
95
THR
96
B
ASN
97
n
96
ASN
97
B
LYS
98
n
97
LYS
98
B
GLU
99
n
98
GLU
99
B
ASN
100
n
99
ASN
100
B
GLU
101
n
100
GLU
101
B
LYS
102
n
101
LYS
102
B
ILE
103
n
102
ILE
103
B
LYS
104
n
103
LYS
104
B
PHE
105
n
104
PHE
105
B
THR
106
n
105
THR
106
B
LEU
107
n
106
LEU
107
B
GLY
108
n
107
GLY
108
B
GLY
109
n
108
GLY
109
B
TYR
110
n
109
TYR
110
B
THR
111
n
110
THR
111
B
SER
112
n
111
SER
112
B
PHE
113
n
112
PHE
113
B
ILE
114
n
113
ILE
114
B
ARG
115
n
114
ARG
115
B
ASN
116
n
115
ASN
116
B
ASN
117
n
116
ASN
117
B
THR
118
n
117
THR
118
B
LYS
119
n
118
LYS
119
B
ASN
120
n
119
ASN
120
B
ILE
121
n
120
ILE
121
B
VAL
122
n
121
VAL
122
B
TYR
123
n
122
TYR
123
B
PRO
124
n
123
PRO
124
B
PHE
125
n
124
PHE
125
B
ASP
126
n
125
ASP
126
B
GLN
127
n
126
GLN
127
B
TYR
128
n
127
TYR
128
B
ILE
129
n
128
ILE
129
B
ALA
130
n
129
ALA
130
B
HIS
131
n
130
HIS
131
B
TRP
132
n
131
TRP
132
B
ILE
133
n
132
ILE
133
B
ILE
134
n
133
ILE
134
B
GLY
135
n
134
GLY
135
B
TYR
136
n
135
TYR
136
B
VAL
137
n
136
VAL
137
B
TYR
138
n
137
TYR
138
B
THR
139
n
138
THR
139
B
ARG
140
n
139
ARG
140
B
VAL
141
n
140
VAL
141
B
ALA
142
n
141
ALA
142
B
THR
143
n
142
THR
143
B
ARG
144
n
143
ARG
144
B
LYS
145
n
144
LYS
145
B
SER
146
n
145
SER
146
B
SER
147
n
146
SER
147
B
LEU
148
n
147
LEU
148
B
LYS
149
n
148
LYS
149
B
THR
150
n
149
THR
150
B
TYR
151
n
150
TYR
151
B
ASN
152
n
151
ASN
152
B
ILE
153
n
152
ILE
153
B
ASN
154
n
153
ASN
154
B
GLU
155
n
154
GLU
155
B
LEU
156
n
155
LEU
156
B
ASN
157
n
156
ASN
157
B
GLU
158
n
157
GLU
158
B
ILE
159
n
158
ILE
159
B
PRO
160
n
159
PRO
160
B
LYS
161
n
160
LYS
161
B
PRO
162
n
161
PRO
162
B
TYR
163
n
162
TYR
163
B
LYS
164
n
163
LYS
164
B
GLY
165
n
164
GLY
165
B
VAL
166
n
165
VAL
166
B
LYS
167
n
166
LYS
167
B
VAL
168
n
167
VAL
168
B
PHE
169
n
168
PHE
169
B
LEU
170
n
169
LEU
170
B
GLN
171
n
170
GLN
171
B
ASP
172
n
171
ASP
172
B
LYS
173
n
172
LYS
173
B
TRP
174
n
173
TRP
174
B
VAL
175
n
174
VAL
175
B
ILE
176
n
175
ILE
176
B
ALA
177
n
176
ALA
177
B
GLY
178
n
177
GLY
178
B
ASP
179
n
178
ASP
179
B
LEU
180
n
179
LEU
180
B
ALA
181
n
180
ALA
181
B
GLY
182
n
181
GLY
182
B
SER
183
n
182
SER
183
B
GLY
184
n
183
GLY
184
B
ASN
185
n
184
ASN
185
B
THR
186
n
185
THR
186
B
THR
187
n
186
THR
187
B
ASN
188
n
187
ASN
188
B
ILE
189
n
188
ILE
189
B
GLY
190
n
189
GLY
190
B
SER
191
n
190
SER
191
B
ILE
192
n
191
ILE
192
B
HIS
193
n
192
HIS
193
B
ALA
194
n
193
ALA
194
B
HIS
195
n
194
HIS
195
B
TYR
196
n
195
TYR
196
B
LYS
197
n
196
LYS
197
B
ASP
198
n
197
ASP
198
B
PHE
199
n
198
PHE
199
B
VAL
200
n
199
VAL
200
B
GLU
201
n
200
GLU
201
B
GLY
202
n
201
GLY
202
B
LYS
203
n
202
LYS
203
B
GLY
204
n
203
GLY
204
B
ILE
205
n
204
ILE
205
B
PHE
206
n
205
PHE
206
B
ASP
207
n
206
ASP
207
B
SER
208
n
207
SER
208
B
GLU
209
n
208
GLU
209
B
ASP
210
n
209
ASP
210
B
GLU
211
n
210
GLU
211
B
PHE
212
n
211
PHE
212
B
LEU
213
n
212
LEU
213
B
ASP
214
n
213
ASP
214
B
TYR
215
n
214
TYR
215
B
TRP
216
n
215
TRP
216
B
ARG
217
n
216
ARG
217
B
ASN
218
n
217
ASN
218
B
TYR
219
n
218
TYR
219
B
GLU
220
n
219
GLU
220
B
ARG
221
n
220
ARG
221
B
THR
222
n
221
THR
222
B
SER
223
n
222
SER
223
B
GLN
224
n
223
GLN
224
B
LEU
225
n
224
LEU
225
B
ARG
226
n
225
ARG
226
B
ASN
227
n
226
ASN
227
B
ASP
228
n
227
ASP
228
B
LYS
229
n
228
LYS
229
B
TYR
230
n
229
TYR
230
B
ASN
231
n
230
ASN
231
B
ASN
232
n
231
ASN
232
B
ILE
233
n
232
ILE
233
B
SER
234
n
233
SER
234
B
GLU
235
n
234
GLU
235
B
TYR
236
n
235
TYR
236
B
ARG
237
n
236
ARG
237
B
ASN
238
n
237
ASN
238
B
TRP
239
n
238
TRP
239
B
ILE
240
n
239
ILE
240
B
TYR
241
n
240
TYR
241
B
ARG
242
n
241
ARG
242
B
GLY
243
n
242
GLY
243
B
ARG
244
n
243
ARG
244
B
LYS
245
n
244
LYS
245
B
author_defined_assembly
4
tetrameric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
TYR
31
C
N
TYR
30
A
O
ILE
23
C
O
ILE
22
A
O
ILE
24
C
O
ILE
23
B
N
CYS
21
D
N
CYS
20
B
N
SER
25
D
N
SER
24
B
O
LYS
29
D
O
LYS
28
B
N
ILE
30
D
N
ILE
29
B
O
TYR
151
D
O
TYR
150
A
O
GLU
64
C
O
GLU
63
A
N
THR
76
C
N
THR
75
A
O
LEU
77
C
O
LEU
76
A
N
ILE
87
C
N
ILE
86
A
O
LYS
86
C
O
LYS
85
A
N
ILE
129
C
N
ILE
128
A
O
THR
139
C
O
THR
138
A
N
LYS
164
C
N
LYS
163
A
N
LEU
107
C
N
LEU
106
A
O
ILE
189
C
O
ILE
188
A
O
GLY
190
C
O
GLY
189
A
N
GLY
178
C
N
GLY
177
B
O
GLU
64
D
O
GLU
63
B
N
THR
76
D
N
THR
75
B
O
LEU
77
D
O
LEU
76
B
N
ILE
87
D
N
ILE
86
B
O
LYS
86
D
O
LYS
85
B
N
ILE
129
D
N
ILE
128
B
O
THR
139
D
O
THR
138
B
N
LYS
164
D
N
LYS
163
B
O
GLY
108
D
O
GLY
107
B
N
ILE
189
D
N
ILE
188
B
O
GLY
190
D
O
GLY
189
B
N
GLY
178
D
N
GLY
177
1
-5.22
0.70
108.00
102.78
C
C
C
O4'
C1'
N9
DA
DA
DA
2
2
2
N
1
9.66
1.20
119.70
129.36
C
C
C
C3'
O3'
P
DA
DA
DG
3
3
4
Y
1
-6.76
0.80
102.40
95.64
C
C
C
C3'
C2'
C1'
DG
DG
DG
4
4
4
N
1
4.81
0.30
108.30
113.11
C
C
C
O4'
C1'
N9
DG
DG
DG
4
4
4
N
1
-5.90
0.70
108.00
102.10
C
C
C
O4'
C1'
N9
DA
DA
DA
5
5
5
N
1
3.73
0.60
118.60
122.33
C
C
C
C6
N1
C2
DA
DA
DA
5
5
5
N
1
-3.72
0.40
104.50
100.78
C
C
C
O4'
C4'
C3'
DT
DT
DT
6
6
6
N
1
2.77
0.30
108.30
111.07
C
C
C
O4'
C1'
N1
DT
DT
DT
6
6
6
N
1
-5.71
0.80
105.90
100.19
C
C
C
O4'
C1'
C2'
DA
DA
DA
7
7
7
N
1
2.58
0.30
108.30
110.88
C
C
C
O4'
C1'
N9
DA
DA
DA
7
7
7
N
1
-7.12
1.00
110.10
102.98
C
C
C
C1'
O4'
C4'
DT
DT
DT
8
8
8
N
1
-4.05
0.60
122.90
118.85
C
C
C
C6
C5
C7
DT
DT
DT
8
8
8
N
1
10.23
1.20
119.70
129.93
C
C
C
C3'
O3'
P
DT
DT
DC
8
8
9
Y
1
-7.29
0.70
108.00
100.71
C
C
C
O4'
C1'
N1
DT
DT
DT
10
10
10
N
1
-3.75
0.60
122.90
119.15
C
C
C
C6
C5
C7
DT
DT
DT
10
10
10
N
1
-4.19
0.60
122.30
118.11
C
C
C
N3
C2
O2
DT
DT
DT
11
11
11
N
1
-4.97
0.60
122.90
117.93
C
C
C
C6
C5
C7
DT
DT
DT
11
11
11
N
1
-6.97
1.00
110.10
103.13
D
D
D
C1'
O4'
C4'
DA
DA
DA
3
3
3
N
1
8.76
1.20
119.70
128.46
D
D
D
C3'
O3'
P
DA
DA
DG
3
3
4
Y
1
-6.91
0.80
102.40
95.49
D
D
D
C3'
C2'
C1'
DG
DG
DG
4
4
4
N
1
4.04
0.60
118.60
122.64
D
D
D
C6
N1
C2
DA
DA
DA
5
5
5
N
1
-3.43
0.40
104.50
101.07
D
D
D
O4'
C4'
C3'
DT
DT
DT
6
6
6
N
1
11.45
1.20
119.70
131.15
D
D
D
C3'
O3'
P
DT
DT
DC
8
8
9
Y
1
-5.38
0.70
108.00
102.62
D
D
D
O4'
C1'
N1
DT
DT
DT
10
10
10
N
1
C
C
C5'
C4'
DA
DA
1
1
0.044
0.007
1.512
1.556
N
1
C
C
N9
C4
DA
DA
1
1
0.039
0.006
1.374
1.413
N
1
C
C
N3
C4
DA
DA
5
5
0.040
0.006
1.344
1.384
N
1
C
C
C5
C7
DT
DT
8
8
0.060
0.006
1.496
1.556
N
1
C
C
C5
C7
DT
DT
10
10
0.051
0.006
1.496
1.547
N
1
C
C
C5'
C4'
DT
DT
11
11
0.058
0.007
1.512
1.570
N
1
C
C
C5
C7
DT
DT
11
11
0.046
0.006
1.496
1.542
N
1
D
D
C5'
C4'
DA
DA
1
1
0.057
0.007
1.512
1.569
N
1
D
D
P
O5'
DA
DA
2
2
0.075
0.010
1.593
1.668
N
1
D
D
C5'
C4'
DA
DA
5
5
0.051
0.007
1.512
1.563
N
1
D
D
C5
C7
DT
DT
8
8
0.042
0.006
1.496
1.538
N
1
D
D
C5
C7
DT
DT
10
10
0.060
0.006
1.496
1.556
N
1
D
D
C5
C7
DT
DT
11
11
0.067
0.006
1.496
1.563
N
1
A
SER
112
-99.93
-115.37
1
A
ASN
117
-38.62
-34.16
1
A
THR
187
31.62
68.56
1
A
LYS
229
-119.50
-98.18
1
B
SER
112
-94.46
-115.31
1
B
ASN
117
-34.81
-35.14
1
B
THR
187
29.40
65.21
1
B
LYS
229
-130.89
-89.43
0.1620000
0.1620000
2.000
20.000
33333
99.900
1
0.000
2.000
20.000
266
4758
0
446
4046
0.010
1.86
refinement
X-PLOR
MG2+ BINDING TO THE ACTIVE SITE OF ECO RV ENDONUCLEASE: A CRYSTALLOGRAPHIC STUDY OF COMPLEXES WITH SUBSTRATE AND PRODUCT DNA AT 2 ANGSTROMS RESOLUTION
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
A
SER
2
C
SER
1
HELX_P
A
TYR
18
C
TYR
17
1
1
17
A
ASP
36
C
ASP
35
HELX_P
A
HIS
59
C
HIS
58
1
2
24
A
PRO
124
C
PRO
123
HELX_P
A
ASP
126
C
ASP
125
5
3
3
A
ARG
144
C
ARG
143
HELX_P
A
LYS
149
C
LYS
148
5
4
6
A
ASN
152
C
ASN
151
HELX_P
A
ILE
159
C
ILE
158
5
5
8
A
LYS
173
C
LYS
172
HELX_P
A
ILE
176
C
ILE
175
1
6
4
A
HIS
195
C
HIS
194
HELX_P
A
GLY
202
C
GLY
201
1
7
8
A
SER
208
C
SER
207
HELX_P
A
ASN
218
C
ASN
217
1
8
11
A
THR
222
C
THR
221
HELX_P
A
ASN
227
C
ASN
226
1
9
6
A
ASN
232
C
ASN
231
HELX_P
A
ARG
242
C
ARG
241
1
10
11
B
SER
2
D
SER
1
HELX_P
B
TYR
18
D
TYR
17
1
11
17
B
ASP
36
D
ASP
35
HELX_P
B
HIS
59
D
HIS
58
1
12
24
B
PRO
124
D
PRO
123
HELX_P
B
ASP
126
D
ASP
125
5
13
3
B
ASN
154
D
ASN
153
HELX_P
B
ILE
159
D
ILE
158
5
14
6
B
LYS
173
D
LYS
172
HELX_P
B
ILE
176
D
ILE
175
1
15
4
B
HIS
195
D
HIS
194
HELX_P
B
GLY
202
D
GLY
201
1
16
8
B
SER
208
D
SER
207
HELX_P
B
ASN
218
D
ASN
217
1
17
11
B
THR
222
D
THR
221
HELX_P
B
ASN
227
D
ASN
226
1
18
6
B
ASN
232
D
ASN
231
HELX_P
B
ARG
242
D
ARG
241
1
19
11
hydrog
WATSON-CRICK
C
DA
2
A
N1
DA
2
1_555
D
DT
11
B
N3
DT
11
1_555
hydrog
WATSON-CRICK
C
DA
2
A
N6
DA
2
1_555
D
DT
11
B
O4
DT
11
1_555
hydrog
WATSON-CRICK
C
DA
3
A
N1
DA
3
1_555
D
DT
10
B
N3
DT
10
1_555
hydrog
WATSON-CRICK
C
DA
3
A
N6
DA
3
1_555
D
DT
10
B
O4
DT
10
1_555
hydrog
WATSON-CRICK
C
DG
4
A
N1
DG
4
1_555
D
DC
9
B
N3
DC
9
1_555
hydrog
WATSON-CRICK
C
DG
4
A
N2
DG
4
1_555
D
DC
9
B
O2
DC
9
1_555
hydrog
WATSON-CRICK
C
DG
4
A
O6
DG
4
1_555
D
DC
9
B
N4
DC
9
1_555
hydrog
WATSON-CRICK
C
DA
5
A
N1
DA
5
1_555
D
DT
8
B
N3
DT
8
1_555
hydrog
WATSON-CRICK
C
DA
5
A
N6
DA
5
1_555
D
DT
8
B
O4
DT
8
1_555
hydrog
WATSON-CRICK
C
DT
6
A
N3
DT
6
1_555
D
DA
7
B
N1
DA
7
1_555
hydrog
WATSON-CRICK
C
DT
6
A
O4
DT
6
1_555
D
DA
7
B
N6
DA
7
1_555
hydrog
WATSON-CRICK
C
DA
7
A
N1
DA
7
1_555
D
DT
6
B
N3
DT
6
1_555
hydrog
WATSON-CRICK
C
DA
7
A
N6
DA
7
1_555
D
DT
6
B
O4
DT
6
1_555
hydrog
WATSON-CRICK
C
DT
8
A
N3
DT
8
1_555
D
DA
5
B
N1
DA
5
1_555
hydrog
WATSON-CRICK
C
DT
8
A
O4
DT
8
1_555
D
DA
5
B
N6
DA
5
1_555
hydrog
WATSON-CRICK
C
DC
9
A
N3
DC
9
1_555
D
DG
4
B
N1
DG
4
1_555
hydrog
WATSON-CRICK
C
DC
9
A
N4
DC
9
1_555
D
DG
4
B
O6
DG
4
1_555
hydrog
WATSON-CRICK
C
DC
9
A
O2
DC
9
1_555
D
DG
4
B
N2
DG
4
1_555
hydrog
WATSON-CRICK
C
DT
10
A
N3
DT
10
1_555
D
DA
3
B
N1
DA
3
1_555
hydrog
WATSON-CRICK
C
DT
10
A
O4
DT
10
1_555
D
DA
3
B
N6
DA
3
1_555
hydrog
WATSON-CRICK
C
DT
11
A
N3
DT
11
1_555
D
DA
2
B
N1
DA
2
1_555
hydrog
WATSON-CRICK
C
DT
11
A
O4
DT
11
1_555
D
DA
2
B
N6
DA
2
1_555
HYDROLASE/DNA
PROTEIN-DNA COMPLEX, HYDROLASE-DNA COMPLEX
A
TYR
72
C
TYR
71
1
A
PRO
73
C
PRO
72
-1.12
B
TYR
72
D
TYR
71
1
B
PRO
73
D
PRO
72
-0.99
T2E5_ECOLI
UNP
2
P04390
1RVA
PDB
1
1RVA
1
244
1RVA
2
245
P04390
A
1
1
244
1
244
1RVA
2
245
P04390
B
1
1
244
1
11
1RVA
1
11
1RVA
C
2
1
11
1
11
1RVA
1
11
1RVA
D
2
1
11
5
5
3
5
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
A
ILE
30
C
ILE
29
A
PRO
32
C
PRO
31
A
VAL
20
C
VAL
19
A
SER
25
C
SER
24
B
VAL
20
D
VAL
19
B
SER
25
D
SER
24
B
LYS
29
D
LYS
28
B
PRO
32
D
PRO
31
B
TYR
151
D
TYR
150
B
ASN
152
D
ASN
151
A
ILE
62
C
ILE
61
A
GLU
64
C
GLU
63
A
PHE
75
C
PHE
74
A
TYR
78
C
TYR
77
A
LYS
86
C
LYS
85
A
THR
96
C
THR
95
A
TYR
128
C
TYR
127
A
ARG
140
C
ARG
139
A
TYR
163
C
TYR
162
A
ASP
172
C
ASP
171
A
THR
106
C
THR
105
A
GLY
109
C
GLY
108
A
ASN
188
C
ASN
187
A
SER
191
C
SER
190
A
ALA
177
C
ALA
176
A
SER
183
C
SER
182
B
ILE
62
D
ILE
61
B
GLU
64
D
GLU
63
B
PHE
75
D
PHE
74
B
TYR
78
D
TYR
77
B
LYS
86
D
LYS
85
B
THR
96
D
THR
95
B
TYR
128
D
TYR
127
B
ARG
140
D
ARG
139
B
TYR
163
D
TYR
162
B
ASP
172
D
ASP
171
B
THR
106
D
THR
105
B
GLY
109
D
GLY
108
B
ASN
188
D
ASN
187
B
SER
191
D
SER
190
B
ALA
177
D
ALA
176
B
ALA
181
D
ALA
180
1
P 1