25.39
15.528
21.626
11.344
A
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1
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A
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1
1
1.00
1
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24.28
15.224
21.986
12.693
A
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1
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A
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1
1
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1
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24.09
13.735
21.980
12.898
A
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1
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A
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C
1
1
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1
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23.77
13.102
21.543
11.713
A
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1
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1
1
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1
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24.61
13.240
20.881
13.925
A
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1
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1
1
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1
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27.04
13.708
21.313
15.176
A
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1
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1
1
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1
O
23.42
11.974
20.403
13.548
A
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1
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A
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C
1
1
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1
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23.37
10.636
20.820
13.883
A
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1
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1
1
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1
O
21.32
11.998
20.623
11.963
A
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1
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A
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1
1
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1
C
19.31
12.121
19.347
11.141
A
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1
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C
1
1
1.00
1
N
18.38
11.248
18.391
11.551
A
C2
C
1
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A
C2
C
1
1
1.00
1
C
18.97
10.450
18.471
12.499
A
O2
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1
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A
O2
C
1
1
1.00
1
O
17.78
11.260
17.212
10.833
A
N3
C
1
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A
N3
C
1
1
1.00
1
N
16.82
12.164
16.949
9.837
A
C4
C
1
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A
C4
C
1
1
1.00
1
C
15.39
12.044
15.714
9.328
A
N4
C
1
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A
N4
C
1
1
1.00
1
N
16.98
13.088
17.967
9.511
A
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C
1
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A
C5
C
1
1
1.00
1
C
17.31
13.040
19.131
10.110
A
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C
1
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A
C6
C
1
1
1.00
1
C
29.90
14.851
20.380
15.754
A
P
C
2
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A
P
C
1
2
1.00
1
P
28.78
16.038
21.080
15.997
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C
2
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A
OP1
C
1
2
1.00
1
O
31.48
15.015
19.241
14.697
A
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2
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1
2
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O
27.30
14.182
19.475
16.973
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2
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1
2
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O
24.92
12.857
19.961
17.090
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2
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1
2
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24.37
11.948
18.932
17.538
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2
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1
2
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24.42
11.595
18.548
16.264
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2
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1
2
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O
24.68
12.399
17.531
17.974
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2
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1
2
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25.28
12.835
17.380
19.214
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2
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1
2
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1
O
24.23
11.268
16.582
17.571
A
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2
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C
1
2
1.00
1
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24.78
10.100
16.366
18.160
A
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2
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1
2
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O
23.47
10.974
17.269
16.218
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2
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1
2
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22.72
11.724
16.503
15.146
A
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2
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C
1
2
1.00
1
N
22.33
11.230
15.259
14.909
A
C2
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2
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A
C2
C
1
2
1.00
1
C
22.58
10.312
14.721
15.537
A
O2
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2
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A
O2
C
1
2
1.00
1
O
22.10
11.810
14.583
13.867
A
N3
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2
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N3
C
1
2
1.00
1
N
21.92
12.892
15.046
13.146
A
C4
C
2
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A
C4
C
1
2
1.00
1
C
20.91
13.431
14.184
12.238
A
N4
C
2
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A
N4
C
1
2
1.00
1
N
21.99
13.401
16.344
13.473
A
C5
C
2
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A
C5
C
1
2
1.00
1
C
22.12
12.797
17.024
14.440
A
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C
2
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A
C6
C
1
2
1.00
1
C
26.21
14.003
16.523
19.868
A
P
C
3
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P
C
1
3
1.00
1
P
27.70
13.632
16.676
21.270
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C
3
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A
OP1
C
1
3
1.00
1
O
24.97
15.329
17.065
19.473
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3
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1
3
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O
23.79
13.563
14.920
19.925
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3
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1
3
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22.28
12.164
14.780
19.884
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3
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1
3
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23.10
11.803
13.339
20.139
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3
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1
3
1.00
1
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23.18
10.952
12.804
19.118
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3
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1
3
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1
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23.46
12.825
12.145
20.264
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3
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1
3
1.00
1
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25.31
13.229
12.183
21.587
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3
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1
3
1.00
1
O
22.13
12.283
10.913
19.583
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3
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1
3
1.00
1
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21.38
11.279
10.044
20.005
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3
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1
3
1.00
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21.53
11.534
11.662
18.335
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3
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1
3
1.00
1
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19.92
12.547
11.976
17.265
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3
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1
3
1.00
1
N
19.16
13.009
11.048
16.420
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C2
C
3
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A
C2
C
1
3
1.00
1
C
19.29
12.576
9.922
16.380
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O2
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3
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O2
C
1
3
1.00
1
O
19.09
14.028
11.415
15.630
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N3
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3
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N3
C
1
3
1.00
1
N
19.44
14.574
12.650
15.543
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C4
C
3
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A
C4
C
1
3
1.00
1
C
20.06
15.629
13.020
14.713
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N4
C
3
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A
N4
C
1
3
1.00
1
N
19.60
13.986
13.641
16.364
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C
3
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A
C5
C
1
3
1.00
1
C
19.73
13.057
13.238
17.191
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C
3
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A
C6
C
1
3
1.00
1
C
26.89
14.564
11.673
22.263
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P
C
4
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P
C
1
4
1.00
1
P
28.88
13.876
11.455
23.513
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C
4
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A
OP1
C
1
4
1.00
1
O
26.45
15.729
12.517
22.181
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4
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C
1
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O
26.59
14.897
10.076
22.079
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4
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1
4
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25.82
13.720
9.235
22.180
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4
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1
4
1.00
1
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26.07
14.182
7.919
21.423
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4
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1
4
1.00
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25.56
14.191
8.350
19.985
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4
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1
4
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O
25.91
15.549
7.352
21.343
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4
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1
4
1.00
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26.46
15.948
6.457
22.282
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4
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1
4
1.00
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O
25.31
15.603
6.458
20.041
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4
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1
4
1.00
1
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26.05
15.142
5.144
20.456
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4
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O2'
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1
4
1.00
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O
23.68
14.727
7.308
19.131
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4
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1
4
1.00
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C
21.94
15.525
8.168
18.167
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4
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N1
C
1
4
1.00
1
N
21.47
16.224
7.496
17.236
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C
4
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C2
C
1
4
1.00
1
C
22.21
16.179
6.261
17.129
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O2
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4
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O2
C
1
4
1.00
1
O
20.63
17.005
8.267
16.427
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4
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N3
C
1
4
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1
N
20.69
17.034
9.611
16.452
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4
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C4
C
1
4
1.00
1
C
21.38
17.808
10.271
15.589
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N4
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4
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N4
C
1
4
1.00
1
N
21.22
16.240
10.302
17.378
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C
4
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C5
C
1
4
1.00
1
C
21.52
15.541
9.538
18.219
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C
4
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C
1
4
1.00
1
C
27.03
17.529
6.632
22.484
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5
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P
G
1
5
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29.20
17.430
6.038
23.811
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5
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G
1
5
1.00
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O
26.70
17.989
8.008
22.317
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5
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1
5
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25.59
18.440
5.492
21.853
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5
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1
5
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24.61
17.701
4.303
21.720
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5
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1
5
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25.10
18.865
3.696
20.844
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5
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1
5
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23.98
18.486
4.316
19.602
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5
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1
5
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25.39
20.339
4.216
20.905
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5
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1
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26.63
20.979
3.978
22.143
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5
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1
5
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24.04
20.835
3.792
19.520
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1
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22.87
20.969
2.459
19.267
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5
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1
5
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23.58
19.503
4.224
18.675
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5
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1
5
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22.96
19.753
5.519
18.186
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5
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1
5
1.00
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N
23.26
19.430
6.616
18.823
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5
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G
1
5
1.00
1
C
23.75
19.790
7.750
18.191
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5
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G
1
5
1.00
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N
22.81
20.394
7.270
17.078
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5
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1
5
1.00
1
C
22.87
21.082
7.961
16.054
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5
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1
5
1.00
1
C
23.09
21.181
9.213
16.018
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5
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1
5
1.00
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O
23.34
21.651
7.228
15.112
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5
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1
5
1.00
1
N
23.22
21.529
5.880
15.146
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C2
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5
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G
1
5
1.00
1
C
23.02
21.987
5.143
14.233
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N2
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5
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A
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G
1
5
1.00
1
N
23.04
20.917
5.140
16.081
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5
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A
N3
G
1
5
1.00
1
N
22.79
20.377
5.929
17.023
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5
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A
C4
G
1
5
1.00
1
C
27.64
22.587
3.926
22.358
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P
G
6
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P
G
1
6
1.00
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P
28.55
22.698
2.738
23.184
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6
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1
6
1.00
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O
27.27
22.975
5.237
22.894
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6
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1
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O
26.27
23.476
3.666
21.062
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6
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1
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O
25.29
23.776
2.479
20.446
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6
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1
6
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24.11
24.661
2.919
19.227
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6
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1
6
1.00
1
C
23.25
23.738
3.772
18.486
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6
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1
6
1.00
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O
23.11
25.832
3.916
19.295
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6
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1
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1
C
22.29
26.917
3.320
19.860
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6
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1
6
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O
22.83
26.063
4.251
17.788
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6
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1
6
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C
24.06
26.795
3.144
17.225
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6
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1
6
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O
22.43
24.607
4.353
17.476
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6
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1
6
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C
22.64
24.213
5.698
17.641
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6
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G
1
6
1.00
1
N
22.33
23.329
6.294
18.498
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6
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G
1
6
1.00
1
C
21.91
23.201
7.607
18.322
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6
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N7
G
1
6
1.00
1
N
22.10
24.033
7.837
17.237
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C5
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6
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A
C5
G
1
6
1.00
1
C
21.85
24.384
9.027
16.564
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6
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A
C6
G
1
6
1.00
1
C
22.58
23.920
10.154
16.850
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O6
G
6
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O6
G
1
6
1.00
1
O
21.63
25.241
8.940
15.602
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6
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A
N1
G
1
6
1.00
1
N
22.35
25.728
7.743
15.259
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C2
G
6
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A
C2
G
1
6
1.00
1
C
23.08
26.567
7.667
14.346
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N2
G
6
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A
N2
G
1
6
1.00
1
N
22.04
25.541
6.513
15.776
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N3
G
6
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A
N3
G
1
6
1.00
1
N
22.34
24.647
6.699
16.780
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C4
G
6
ATOM
A
C4
G
1
6
1.00
1
C
20.55
28.167
4.130
20.555
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P
G
7
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A
P
G
1
7
1.00
1
P
20.51
28.775
2.925
21.001
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7
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A
OP1
G
1
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1.00
1
O
19.44
27.520
5.278
21.129
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7
ATOM
A
OP2
G
1
7
1.00
1
O
20.55
29.303
4.525
19.433
A
O5'
G
7
ATOM
A
O5'
G
1
7
1.00
1
O
18.23
29.315
3.795
18.189
A
C5'
G
7
ATOM
A
C5'
G
1
7
1.00
1
C
17.01
29.920
4.817
17.208
A
C4'
G
7
ATOM
A
C4'
G
1
7
1.00
1
C
15.49
28.818
5.672
16.903
A
O4'
G
7
ATOM
A
O4'
G
1
7
1.00
1
O
17.32
30.935
5.798
17.651
A
C3'
G
7
ATOM
A
C3'
G
1
7
1.00
1
C
19.18
32.286
5.437
17.784
A
O3'
G
7
ATOM
A
O3'
G
1
7
1.00
1
O
17.17
30.737
6.942
16.727
A
C2'
G
7
ATOM
A
C2'
G
1
7
1.00
1
C
19.54
31.232
6.924
15.390
A
O2'
G
7
ATOM
A
O2'
G
1
7
1.00
1
O
15.12
29.297
6.779
16.189
A
C1'
G
7
ATOM
A
C1'
G
1
7
1.00
1
C
14.05
28.735
7.962
16.551
A
N9
G
7
ATOM
A
N9
G
1
7
1.00
1
N
14.31
27.893
7.909
17.593
A
C8
G
7
ATOM
A
C8
G
1
7
1.00
1
C
13.91
27.259
9.055
17.905
A
N7
G
7
ATOM
A
N7
G
1
7
1.00
1
N
13.48
27.851
9.882
17.068
A
C5
G
7
ATOM
A
C5
G
1
7
1.00
1
C
13.70
27.615
11.258
16.972
A
C6
G
7
ATOM
A
C6
G
1
7
1.00
1
C
12.83
26.737
11.857
17.624
A
O6
G
7
ATOM
A
O6
G
1
7
1.00
1
O
14.90
28.338
11.849
16.040
A
N1
G
7
ATOM
A
N1
G
1
7
1.00
1
N
15.17
29.179
11.089
15.249
A
C2
G
7
ATOM
A
C2
G
1
7
1.00
1
C
15.18
29.803
11.721
14.352
A
N2
G
7
ATOM
A
N2
G
1
7
1.00
1
N
14.36
29.490
9.760
15.259
A
N3
G
7
ATOM
A
N3
G
1
7
1.00
1
N
13.78
28.728
9.262
16.226
A
C4
G
7
ATOM
A
C4
G
1
7
1.00
1
C
21.30
33.285
6.554
18.488
A
P
G
8
ATOM
A
P
G
1
8
1.00
1
P
21.31
34.562
5.884
18.723
A
OP1
G
8
ATOM
A
OP1
G
1
8
1.00
1
O
20.61
32.508
6.935
19.678
A
OP2
G
8
ATOM
A
OP2
G
1
8
1.00
1
O
18.83
33.559
7.823
17.443
A
O5'
G
8
ATOM
A
O5'
G
1
8
1.00
1
O
17.09
34.448
8.831
17.627
A
C5'
G
8
ATOM
A
C5'
G
1
8
1.00
1
C
15.43
34.868
10.055
16.784
A
C4'
G
8
ATOM
A
C4'
G
1
8
1.00
1
C
13.79
33.462
10.327
16.612
A
O4'
G
8
ATOM
A
O4'
G
1
8
1.00
1
O
15.90
35.675
11.262
17.094
A
C3'
G
8
ATOM
A
C3'
G
1
8
1.00
1
C
15.36
37.041
11.791
16.468
A
O3'
G
8
ATOM
A
O3'
G
1
8
1.00
1
O
16.85
34.653
12.355
16.713
A
C2'
G
8
ATOM
A
C2'
G
1
8
1.00
1
C
19.61
35.566
13.334
15.815
A
O2'
G
8
ATOM
A
O2'
G
1
8
1.00
1
O
15.20
33.326
11.703
16.228
A
C1'
G
8
ATOM
A
C1'
G
1
8
1.00
1
C
14.57
32.179
11.932
16.983
A
N9
G
8
ATOM
A
N9
G
1
8
1.00
1
N
15.02
31.569
11.002
17.720
A
C8
G
8
ATOM
A
C8
G
1
8
1.00
1
C
15.34
30.559
11.436
18.465
A
N7
G
8
ATOM
A
N7
G
1
8
1.00
1
N
15.25
30.532
12.737
18.168
A
C5
G
8
ATOM
A
C5
G
1
8
1.00
1
C
16.27
29.660
13.730
18.676
A
C6
G
8
ATOM
A
C6
G
1
8
1.00
1
C
17.07
28.785
13.558
19.582
A
O6
G
8
ATOM
A
O6
G
1
8
1.00
1
O
16.36
29.723
14.969
18.152
A
N1
G
8
ATOM
A
N1
G
1
8
1.00
1
N
16.49
30.689
15.124
17.246
A
C2
G
8
ATOM
A
C2
G
1
8
1.00
1
C
17.44
30.684
16.281
16.840
A
N2
G
8
ATOM
A
N2
G
1
8
1.00
1
N
15.65
31.630
14.291
16.712
A
N3
G
8
ATOM
A
N3
G
1
8
1.00
1
N
15.23
31.469
13.088
17.256
A
C4
G
8
ATOM
A
C4
G
1
8
1.00
1
C
0.025167
0.014530
0.000000
0.000000
0.029061
0.000000
0.000000
0.000000
0.017081
0.00000
0.00000
0.00000
Portmann, S.
Usman, N.
Egli, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
39.734
39.734
58.545
C9 H14 N3 O8 P
323.197
y
CYTIDINE-5'-MONOPHOSPHATE
RNA linking
C10 H14 N5 O8 P
363.221
y
GUANOSINE-5'-MONOPHOSPHATE
RNA linking
N
1
N
O
N
2
N
P
N
3
N
O
N
4
N
O
N
5
N
O
N
6
N
C
N
7
R
C
N
8
N
O
N
9
S
C
N
10
N
O
N
11
R
C
N
12
N
O
N
13
R
C
N
14
N
N
N
15
N
C
N
16
N
O
N
17
N
N
N
18
N
C
N
19
N
N
N
20
N
C
N
21
N
C
N
22
N
H
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
O
N
37
N
P
N
38
N
O
N
39
N
O
N
40
N
O
N
41
N
C
N
42
R
C
N
43
N
O
N
44
S
C
N
45
N
O
N
46
R
C
N
47
N
O
N
48
R
C
Y
49
N
N
Y
50
N
C
Y
51
N
N
Y
52
N
C
N
53
N
C
N
54
N
O
N
55
N
N
N
56
N
C
N
57
N
N
N
58
N
N
Y
59
N
C
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
doub
N
28
N
sing
N
29
N
doub
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
doub
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
doub
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
Y
61
N
sing
Y
62
N
sing
Y
63
N
doub
N
64
N
sing
Y
65
N
sing
N
66
N
sing
Y
67
N
doub
N
68
N
doub
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
doub
N
74
N
sing
N
75
N
sing
N
76
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
34
7569
7575
10.1021/bi00023a002
7779802
The crystal structure of r(CCCCGGGG) in two distinct lattices.
1995
10.2210/pdb1rxa/pdb
pdb_00001rxa
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
ROOM TEMPERATURE
1
IMAGE PLATE
MARRESEARCH
x-ray
1
1.0
ROTATING ANODE
ENRAF-NONIUS
2556.593
RNA (5'-R(*CP*CP*CP*CP*GP*GP*GP*G)-3')
1
syn
polymer
no
no
CCCCGGGG
CCCCGGGG
A
polyribonucleotide
n
n
n
n
n
n
n
n
2.61
52.86
VAPOR DIFFUSION
4.50
pH 4.50, VAPOR DIFFUSION
WATER
1
MPD
1
NA CACODYLATE
1
CACL2
1
WATER
2
MPD
2
5.126
1
19
A
1
A
8
-2.555
A_C1:G8_A
1
6.802
-0.593
-0.126
-0.398
13.552
1
19
A
2
A
7
-9.032
A_C2:G7_A
2
-5.985
-0.173
-0.246
-0.259
-1.182
1
A
3
A
6
9.515
A_C3:G6_A
3
-7.685
0.632
0.550
0.095
-7.877
1
19
A
4
A
5
-4.138
A_C4:G5_A
4
-7.021
-0.154
0.553
-0.381
7.877
1
19
A
5
A
4
-4.138
A_G5:C4_A
5
-7.021
0.154
0.553
-0.381
1.182
1
A
6
A
3
9.515
A_G6:C3_A
6
-7.685
-0.632
0.550
0.095
-13.552
1
19
A
7
A
2
-9.032
A_G7:C2_A
7
-5.985
0.173
-0.246
-0.259
-5.126
1
19
A
8
A
1
-2.554
A_G8:C1_A
8
6.802
0.593
-0.126
-0.398
2.948
37.955
A
A
1
2
4.876
A
A
8
7
3.107
3.168
-0.183
-1.887
AA_C1C2:G7G8_AA
1
-0.576
0.886
37.823
-3.276
0.213
3.301
40.759
A
A
2
3
4.667
A
A
7
6
3.573
3.241
0.706
-2.204
AA_C2C3:G6G7_AA
2
-4.467
6.432
40.400
-3.542
-1.534
1.573
26.802
A
A
3
4
30.976
A
A
6
5
3.125
13.700
-0.842
-2.188
AA_C3C4:G5G6_AA
3
0.673
-1.522
23.081
-7.464
1.951
2.819
37.313
A
A
4
5
-0.187
A
A
5
4
2.814
-0.120
0.000
-1.784
AA_C4G5:C4G5_AA
4
0.000
0.000
37.313
-2.774
0.000
1.573
26.802
A
A
5
6
30.976
A
A
4
3
3.125
13.700
0.842
-2.188
AA_G5G6:C3C4_AA
5
-0.673
1.522
23.081
-7.464
-1.951
3.301
40.759
A
A
6
7
4.667
A
A
3
2
3.573
3.241
-0.706
-2.204
AA_G6G7:C2C3_AA
6
4.467
-6.432
40.400
-3.542
1.534
2.948
37.955
A
A
7
8
4.876
A
A
2
1
3.107
3.168
0.183
-1.887
AA_G7G8:C1C2_AA
7
0.576
-0.886
37.823
-3.276
-0.213
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
1
0
1996-10-20
1
1
2008-05-22
1
2
2011-07-13
1
3
2024-02-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
BNL
Y
NDB
1995-05-05
REL
C
1
n
1
C
1
A
C
2
n
2
C
2
A
C
3
n
3
C
3
A
C
4
n
4
C
4
A
G
5
n
5
G
5
A
G
6
n
6
G
6
A
G
7
n
7
G
7
A
G
8
n
8
G
8
A
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
11_655
-x+y+1,y,-z+1/2
crystal symmetry operation
39.7340000000
0.0000000000
29.2725000000
1
16.41
1.60
113.70
130.11
A
A
A
C2'
C3'
O3'
C
C
C
1
1
1
N
1
7.51
1.00
102.60
110.11
A
A
A
C4'
C3'
C2'
C
C
C
1
1
1
N
1
19.23
2.90
113.30
132.53
A
A
A
C3'
C2'
O2'
C
C
C
1
1
1
N
1
3.30
0.50
119.90
123.20
A
A
A
C2
N3
C4
C
C
C
1
1
1
N
1
-4.46
0.40
121.90
117.44
A
A
A
N3
C4
C5
C
C
C
1
1
1
N
1
3.31
0.50
117.40
120.71
A
A
A
C4
C5
C6
C
C
C
1
1
1
N
1
7.85
0.60
118.90
126.75
A
A
A
N1
C2
O2
C
C
C
1
1
1
N
1
-4.66
0.70
121.90
117.24
A
A
A
N3
C2
O2
C
C
C
1
1
1
N
1
-4.83
0.70
118.00
113.17
A
A
A
N3
C4
N4
C
C
C
1
1
1
N
1
9.18
0.70
120.20
129.38
A
A
A
C5
C4
N4
C
C
C
1
1
1
N
1
-6.78
1.10
118.80
112.02
A
A
A
C2
N1
C1'
C
C
C
1
1
1
N
1
8.47
1.20
110.70
119.17
A
A
A
O5'
P
OP1
C
C
C
2
2
2
N
1
-7.55
0.90
105.70
98.15
A
A
A
O5'
P
OP2
C
C
C
2
2
2
N
1
-16.38
1.60
120.90
104.52
A
A
A
P
O5'
C5'
C
C
C
2
2
2
N
1
-9.20
1.00
104.00
94.80
A
A
A
O4'
C4'
C3'
C
C
C
2
2
2
N
1
-14.91
1.20
109.10
94.19
A
A
A
C5'
C4'
O4'
C
C
C
2
2
2
N
1
-5.82
0.70
101.30
95.48
A
A
A
C3'
C2'
C1'
C
C
C
2
2
2
N
1
4.39
0.50
119.90
124.29
A
A
A
C2
N3
C4
C
C
C
2
2
2
N
1
-4.29
0.40
121.90
117.61
A
A
A
N3
C4
C5
C
C
C
2
2
2
N
1
6.54
0.60
118.90
125.44
A
A
A
N1
C2
O2
C
C
C
2
2
2
N
1
5.58
0.70
120.20
125.78
A
A
A
C5
C4
N4
C
C
C
2
2
2
N
1
13.88
1.20
119.70
133.58
A
A
A
C3'
O3'
P
C
C
C
2
2
3
Y
1
-15.65
0.90
105.70
90.05
A
A
A
O5'
P
OP1
C
C
C
3
3
3
N
1
15.93
1.20
110.70
126.63
A
A
A
O5'
P
OP2
C
C
C
3
3
3
N
1
-9.92
1.60
120.90
110.98
A
A
A
P
O5'
C5'
C
C
C
3
3
3
N
1
9.60
1.60
116.00
125.60
A
A
A
C5'
C4'
C3'
C
C
C
3
3
3
N
1
5.27
0.80
109.90
115.17
A
A
A
C1'
O4'
C4'
C
C
C
3
3
3
N
1
10.28
1.60
113.70
123.98
A
A
A
C2'
C3'
O3'
C
C
C
3
3
3
N
1
7.88
1.00
102.60
110.48
A
A
A
C4'
C3'
C2'
C
C
C
3
3
3
N
1
-8.46
1.00
105.80
97.34
A
A
A
O4'
C1'
C2'
C
C
C
3
3
3
N
1
9.69
0.70
108.50
118.19
A
A
A
O4'
C1'
N1
C
C
C
3
3
3
N
1
6.58
0.50
119.90
126.48
A
A
A
C2
N3
C4
C
C
C
3
3
3
N
1
-6.16
0.40
121.90
115.74
A
A
A
N3
C4
C5
C
C
C
3
3
3
N
1
4.84
0.50
121.00
125.84
A
A
A
C5
C6
N1
C
C
C
3
3
3
N
1
4.08
0.60
118.90
122.98
A
A
A
N1
C2
O2
C
C
C
3
3
3
N
1
7.92
0.70
118.00
125.92
A
A
A
N3
C4
N4
C
C
C
3
3
3
N
1
10.58
1.20
119.70
130.28
A
A
A
C3'
O3'
P
C
C
C
3
3
4
Y
1
11.92
1.90
104.00
115.92
A
A
A
O3'
P
O5'
C
C
C
3
4
4
Y
1
7.50
1.10
110.50
118.00
A
A
A
O3'
P
OP2
C
C
C
3
4
4
Y
1
-14.25
2.20
105.20
90.95
A
A
A
O3'
P
OP1
C
C
C
3
4
4
Y
1
-13.02
0.90
105.70
92.68
A
A
A
O5'
P
OP1
C
C
C
4
4
4
N
1
-7.19
0.80
109.40
102.21
A
A
A
O5'
C5'
C4'
C
C
C
4
4
4
N
1
-10.98
1.00
104.00
93.02
A
A
A
O4'
C4'
C3'
C
C
C
4
4
4
N
1
11.70
1.60
116.00
127.70
A
A
A
C5'
C4'
C3'
C
C
C
4
4
4
N
1
-8.92
0.80
108.20
99.28
A
A
A
O4'
C1'
N1
C
C
C
4
4
4
N
1
4.61
0.50
119.90
124.51
A
A
A
C2
N3
C4
C
C
C
4
4
4
N
1
3.69
0.60
118.90
122.59
A
A
A
N1
C2
O2
C
C
C
4
4
4
N
1
-11.94
1.20
119.70
107.76
A
A
A
C3'
O3'
P
C
C
G
4
4
5
Y
1
11.90
1.90
104.00
115.90
A
A
A
O3'
P
O5'
C
G
G
4
5
5
Y
1
-15.01
2.20
105.20
90.19
A
A
A
O3'
P
OP1
C
G
G
4
5
5
Y
1
-9.50
0.90
105.70
96.20
A
A
A
O5'
P
OP1
G
G
G
5
5
5
N
1
-19.97
0.80
109.40
89.43
A
A
A
O5'
C5'
C4'
G
G
G
5
5
5
N
1
-10.86
1.60
120.90
110.04
A
A
A
P
O5'
C5'
G
G
G
5
5
5
N
1
-6.03
1.00
104.00
97.97
A
A
A
O4'
C4'
C3'
G
G
G
5
5
5
N
1
-12.26
1.20
109.10
96.84
A
A
A
C5'
C4'
O4'
G
G
G
5
5
5
N
1
13.09
1.60
113.70
126.79
A
A
A
C2'
C3'
O3'
G
G
G
5
5
5
N
1
-5.41
0.60
125.10
119.69
A
A
A
C6
N1
C2
G
G
G
5
5
5
N
1
5.53
0.50
111.50
117.03
A
A
A
C5
C6
N1
G
G
G
5
5
5
N
1
5.91
0.90
116.20
122.11
A
A
A
N1
C2
N2
G
G
G
5
5
5
N
1
-9.50
0.70
119.90
110.40
A
A
A
N3
C2
N2
G
G
G
5
5
5
N
1
-5.50
0.60
128.60
123.10
A
A
A
C5
C6
O6
G
G
G
5
5
5
N
1
12.77
1.90
104.00
116.77
A
A
A
O3'
P
O5'
G
G
G
5
6
6
Y
1
-6.12
0.80
109.40
103.28
A
A
A
O5'
C5'
C4'
G
G
G
6
6
6
N
1
-6.82
1.00
104.00
97.18
A
A
A
O4'
C4'
C3'
G
G
G
6
6
6
N
1
-7.47
1.20
109.10
101.63
A
A
A
C5'
C4'
O4'
G
G
G
6
6
6
N
1
-7.67
0.70
109.70
102.03
A
A
A
C1'
O4'
C4'
G
G
G
6
6
6
N
1
-7.16
0.70
101.30
94.14
A
A
A
C3'
C2'
C1'
G
G
G
6
6
6
N
1
6.65
0.90
107.60
114.25
A
A
A
O4'
C1'
C2'
G
G
G
6
6
6
N
1
-10.57
0.80
108.20
97.63
A
A
A
O4'
C1'
N9
G
G
G
6
6
6
N
1
-5.55
0.60
125.10
119.55
A
A
A
C6
N1
C2
G
G
G
6
6
6
N
1
8.04
0.60
123.90
131.94
A
A
A
N1
C2
N3
G
G
G
6
6
6
N
1
-7.41
0.50
111.90
104.49
A
A
A
C2
N3
C4
G
G
G
6
6
6
N
1
6.11
0.50
111.50
117.61
A
A
A
C5
C6
N1
G
G
G
6
6
6
N
1
-11.24
0.70
119.90
108.66
A
A
A
N3
C2
N2
G
G
G
6
6
6
N
1
-4.69
0.60
128.60
123.91
A
A
A
C5
C6
O6
G
G
G
6
6
6
N
1
18.50
1.50
119.60
138.10
A
A
A
OP1
P
OP2
G
G
G
7
7
7
N
1
-8.68
0.90
105.70
97.02
A
A
A
O5'
P
OP1
G
G
G
7
7
7
N
1
-6.88
0.80
109.40
102.52
A
A
A
O5'
C5'
C4'
G
G
G
7
7
7
N
1
-10.42
1.10
112.00
101.58
A
A
A
N9
C1'
C2'
G
G
G
7
7
7
N
1
5.74
0.70
108.50
114.24
A
A
A
O4'
C1'
N9
G
G
G
7
7
7
N
1
-20.85
3.00
110.60
89.75
A
A
A
C1'
C2'
O2'
G
G
G
7
7
7
N
1
-5.67
0.60
125.10
119.43
A
A
A
C6
N1
C2
G
G
G
7
7
7
N
1
8.15
0.60
123.90
132.05
A
A
A
N1
C2
N3
G
G
G
7
7
7
N
1
-8.03
0.50
111.90
103.87
A
A
A
C2
N3
C4
G
G
G
7
7
7
N
1
2.51
0.40
110.80
113.31
A
A
A
C4
C5
N7
G
G
G
7
7
7
N
1
-4.19
0.50
104.30
100.11
A
A
A
C5
N7
C8
G
G
G
7
7
7
N
1
3.14
0.50
113.10
116.24
A
A
A
N7
C8
N9
G
G
G
7
7
7
N
1
-3.48
0.40
106.40
102.92
A
A
A
C8
N9
C4
G
G
G
7
7
7
N
1
-4.59
0.60
130.40
125.81
A
A
A
C6
C5
N7
G
G
G
7
7
7
N
1
-7.56
0.70
119.90
112.34
A
A
A
N3
C2
N2
G
G
G
7
7
7
N
1
-4.87
0.60
128.60
123.73
A
A
A
C5
C6
O6
G
G
G
7
7
7
N
1
-11.38
1.30
127.00
115.62
A
A
A
C8
N9
C1'
G
G
G
7
7
7
N
1
14.96
1.30
126.50
141.46
A
A
A
C4
N9
C1'
G
G
G
7
7
7
N
1
22.17
1.90
111.70
133.87
A
A
A
O5'
C5'
C4'
G
G
G
8
8
8
N
1
7.57
0.80
106.10
113.67
A
A
A
O4'
C4'
C3'
G
G
G
8
8
8
N
1
16.70
1.60
116.00
132.70
A
A
A
C5'
C4'
C3'
G
G
G
8
8
8
N
1
-22.00
1.20
109.10
87.10
A
A
A
C5'
C4'
O4'
G
G
G
8
8
8
N
1
17.85
2.00
113.00
130.85
A
A
A
C4'
C3'
O3'
G
G
G
8
8
8
N
1
8.67
0.80
101.50
110.17
A
A
A
C3'
C2'
C1'
G
G
G
8
8
8
N
1
-13.00
0.80
108.20
95.20
A
A
A
O4'
C1'
N9
G
G
G
8
8
8
N
1
-11.20
0.60
125.10
113.90
A
A
A
C6
N1
C2
G
G
G
8
8
8
N
1
10.05
0.60
123.90
133.95
A
A
A
N1
C2
N3
G
G
G
8
8
8
N
1
-3.94
0.50
111.90
107.96
A
A
A
C2
N3
C4
G
G
G
8
8
8
N
1
6.98
0.50
111.50
118.48
A
A
A
C5
C6
N1
G
G
G
8
8
8
N
1
-2.59
0.40
106.40
103.81
A
A
A
C8
N9
C4
G
G
G
8
8
8
N
1
-6.83
0.90
116.20
109.37
A
A
A
N1
C2
N2
G
G
G
8
8
8
N
1
-4.18
0.60
119.90
115.72
A
A
A
N1
C6
O6
G
G
G
8
8
8
N
1
A
A
C3'
C2'
C
C
1
1
-0.118
0.011
1.523
1.405
N
1
A
A
C2'
C1'
C
C
1
1
0.071
0.011
1.529
1.600
N
1
A
A
P
O5'
C
C
2
2
0.066
0.010
1.593
1.659
N
1
A
A
C5'
C4'
C
C
2
2
-0.064
0.007
1.508
1.444
N
1
A
A
O3'
C3'
C
C
2
2
-0.094
0.014
1.417
1.323
N
1
A
A
C2'
O2'
C
C
2
2
-0.086
0.013
1.412
1.326
N
1
A
A
N3
C4
C
C
2
2
0.045
0.007
1.335
1.380
N
1
A
A
P
O5'
C
C
3
3
0.070
0.010
1.593
1.663
N
1
A
A
C2'
C1'
C
C
3
3
0.108
0.011
1.529
1.637
N
1
A
A
O4'
C1'
C
C
3
3
0.087
0.012
1.415
1.502
N
1
A
A
C4
N4
C
C
3
3
0.057
0.009
1.335
1.392
N
1
A
A
C5'
C4'
C
C
4
4
0.078
0.012
1.509
1.587
N
1
A
A
C2'
C1'
G
G
5
5
0.107
0.011
1.529
1.636
N
1
A
A
C6
N1
G
G
5
5
-0.069
0.007
1.391
1.322
N
1
A
A
N7
C8
G
G
5
5
0.042
0.006
1.305
1.347
N
1
A
A
C8
N9
G
G
5
5
-0.065
0.007
1.374
1.309
N
1
A
A
C2
N2
G
G
5
5
-0.081
0.010
1.341
1.260
N
1
A
A
C6
N1
G
G
6
6
-0.100
0.007
1.391
1.291
N
1
A
A
C2
N2
G
G
6
6
-0.099
0.010
1.341
1.242
N
1
A
A
C1'
N9
G
G
7
7
-0.105
0.014
1.464
1.359
N
1
A
A
C6
N1
G
G
7
7
-0.072
0.007
1.391
1.319
N
1
A
A
C5
N7
G
G
7
7
-0.071
0.006
1.388
1.317
N
1
A
A
N7
C8
G
G
7
7
0.041
0.006
1.305
1.346
N
1
A
A
C2
N2
G
G
7
7
-0.079
0.010
1.341
1.262
N
1
A
A
P
O5'
G
G
8
8
0.074
0.010
1.593
1.667
N
1
A
A
O5'
C5'
G
G
8
8
-0.063
0.009
1.420
1.357
N
1
A
A
O3'
C3'
G
G
8
8
0.166
0.012
1.427
1.593
N
1
A
A
C2'
O2'
G
G
8
8
0.192
0.010
1.420
1.612
N
1
A
A
C6
N1
G
G
8
8
-0.044
0.007
1.391
1.347
N
1
A
A
C5
N7
G
G
8
8
-0.053
0.006
1.388
1.335
N
1
A
A
C2
N2
G
G
8
8
-0.115
0.010
1.341
1.226
N
0.2500000
0.2500000
2.900
10.000
710
1
2.000
TR
isotropic
TR
isotropic
2.900
10.000
0
169
0
169
0
fix
fix
refinement
X-PLOR
CRYSTAL STRUCTURE OF R(CCCCGGGG) IN TWO DISTINCT LATTICES
1
N
N
hydrog
WATSON-CRICK
A
C
1
A
N3
C
1
1_555
A
G
8
A
N1
G
8
11_655
hydrog
WATSON-CRICK
A
C
1
A
N4
C
1
1_555
A
G
8
A
O6
G
8
11_655
hydrog
WATSON-CRICK
A
C
1
A
O2
C
1
1_555
A
G
8
A
N2
G
8
11_655
hydrog
WATSON-CRICK
A
C
2
A
N3
C
2
1_555
A
G
7
A
N1
G
7
11_655
hydrog
WATSON-CRICK
A
C
2
A
N4
C
2
1_555
A
G
7
A
O6
G
7
11_655
hydrog
WATSON-CRICK
A
C
2
A
O2
C
2
1_555
A
G
7
A
N2
G
7
11_655
hydrog
C-G PAIR
A
C
3
A
O2
C
3
1_555
A
G
6
A
N1
G
6
11_655
hydrog
WATSON-CRICK
A
C
4
A
N3
C
4
1_555
A
G
5
A
N1
G
5
11_655
hydrog
WATSON-CRICK
A
C
4
A
N4
C
4
1_555
A
G
5
A
O6
G
5
11_655
hydrog
WATSON-CRICK
A
C
4
A
O2
C
4
1_555
A
G
5
A
N2
G
5
11_655
hydrog
WATSON-CRICK
A
G
5
A
N1
G
5
1_555
A
C
4
A
N3
C
4
11_655
hydrog
WATSON-CRICK
A
G
5
A
N2
G
5
1_555
A
C
4
A
O2
C
4
11_655
hydrog
WATSON-CRICK
A
G
5
A
O6
G
5
1_555
A
C
4
A
N4
C
4
11_655
hydrog
G-C PAIR
A
G
6
A
N1
G
6
1_555
A
C
3
A
O2
C
3
11_655
hydrog
WATSON-CRICK
A
G
7
A
N1
G
7
1_555
A
C
2
A
N3
C
2
11_655
hydrog
WATSON-CRICK
A
G
7
A
N2
G
7
1_555
A
C
2
A
O2
C
2
11_655
hydrog
WATSON-CRICK
A
G
7
A
O6
G
7
1_555
A
C
2
A
N4
C
2
11_655
hydrog
WATSON-CRICK
A
G
8
A
N1
G
8
1_555
A
C
1
A
N3
C
1
11_655
hydrog
WATSON-CRICK
A
G
8
A
N2
G
8
1_555
A
C
1
A
O2
C
1
11_655
hydrog
WATSON-CRICK
A
G
8
A
O6
G
8
1_555
A
C
1
A
N4
C
1
11_655
RNA
A-RNA, DOUBLE HELIX, RNA
1RXA
PDB
1
1RXA
1
8
1RXA
1
8
1RXA
A
1
1
8
178
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