0.006668 0.000000 0.000000 0.000000 0.006668 0.000000 0.000000 0.000000 0.006668 0.00000 0.00000 0.00000 Boutboul, S. Carroll, K.J. Basdevant, A. Gomez, C. Nandrot, E. Clement, K. Shapiro, L. Abitbol, M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 24 90.000 90.000 90.000 149.981 149.981 149.981 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C6 H14 O4 150.173 TRIETHYLENE GLYCOL non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N C N 251 N O N 252 N C N 253 N O N 254 N C N 255 N C N 256 N O N 257 N C N 258 N C N 259 N O N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N N N 275 S C N 276 N C N 277 N O N 278 N C Y 279 N C Y 280 N C Y 281 N C Y 282 N C Y 283 N C Y 284 N C N 285 N O N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N N N 298 S C N 299 N C N 300 N O N 301 N C N 302 N C N 303 N C N 304 N O N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N N N 315 S C N 316 N C N 317 N O N 318 N C N 319 N O N 320 N O N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N N N 329 S C N 330 N C N 331 N O N 332 R C N 333 N O N 334 N C N 335 N O N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N N N 346 S C N 347 N C N 348 N O N 349 N C Y 350 N C Y 351 N C Y 352 N C Y 353 N N Y 354 N C Y 355 N C Y 356 N C Y 357 N C Y 358 N C N 359 N O N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N N N 373 S C N 374 N C N 375 N O N 376 N C Y 377 N C Y 378 N C Y 379 N C Y 380 N C Y 381 N C Y 382 N C N 383 N O N 384 N O N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N N N 397 S C N 398 N C N 399 N O N 400 N C N 401 N C N 402 N C N 403 N O N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing Y 271 N doub Y 272 N sing Y 273 N sing N 274 N sing Y 275 N doub N 276 N sing Y 277 N doub N 278 N sing Y 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N doub N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N doub N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N doub N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N doub N 336 N sing N 337 N sing N 338 N sing N 339 N sing Y 340 N doub Y 341 N sing Y 342 N sing N 343 N sing Y 344 N doub Y 345 N sing Y 346 N sing N 347 N sing Y 348 N sing Y 349 N doub N 350 N sing Y 351 N doub N 352 N sing Y 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N doub N 364 N sing N 365 N sing N 366 N sing N 367 N sing Y 368 N doub Y 369 N sing Y 370 N sing N 371 N sing Y 372 N doub N 373 N sing Y 374 N doub N 375 N sing Y 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N doub N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing To be Published 0353 A novel human obesity and sensory deficit syndrome resulting from a mutation in the TUB gene US METHODS ENZYMOL. MENZAU 0878 0076-6879 276 307 326 10.1016/S0076-6879(97)76066-X Processing of X-ray Diffraction Data Collected in Oscillation Mode 1997 DK ACTA CRYSTALLOGR.,SECT.A ACACEQ 0621 0108-7673 50 157 163 10.1107/S0108767393007597 AMoRe: an Automated Package for Molecular Replacement 1994 DK ACTA CRYSTALLOGR.,SECT.D ABCRE6 0766 0907-4449 53 240 255 10.1107/S0907444996012255 Refinement of Macromolecular Structures by the Maximum-Likelihood Method 1997 10.2210/pdb1s31/pdb pdb_00001s31 110 1 CCD 2003-08-23 MARRESEARCH Diamond SINGLE WAVELENGTH M x-ray 1 0.9814 1.0 32-ID APS 0.9814 SYNCHROTRON APS BEAMLINE 32-ID 30798.025 tubby isoform a 1 man polymer 150.173 TRIETHYLENE GLYCOL 1 syn non-polymer 18.015 water 90 nat water no no APSPTAPEQPVDVEVQDLEEFALRPAPQGITIKCRITRDKKGMDRGMFPTYFLHLDREDGKKVFLLAGRKRKKSKTSNYL ISVDPTDLSRGGDSYIGKLRSNLMGTKFTVYDNGVNPQKASSSTLESGTLRQELAAVCYETNVLGFKGPRKMSVIVPGMN MVHERVSIRPRNEHETLLARWQNKNTESIIELQNKTPVWNDDTQSYVLNFHGRVTQASVKNFQIIHGNDPDYIVMQFGRV AEDVFTMDYNYPLCALQAFAIALSSFDSKLACE APSPTAPEQPVDVEVQDLEEFALRPAPQGITIKCRITRDKKGMDRGMFPTYFLHLDREDGKKVFLLAGRKRKKSKTSNYL ISVDPTDLSRGGDSYIGKLRSNLMGTKFTVYDNGVNPQKASSSTLESGTLRQELAAVCYETNVLGFKGPRKMSVIVPGMN MVHERVSIRPRNEHETLLARWQNKNTESIIELQNKTPVWNDDTQSYVLNFHGRVTQASVKNFQIIHGNDPDYIVMQFGRV AEDVFTMDYNYPLCALQAFAIALSSFDSKLACE A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia Escherichia coli sample tub 9606 Homo sapiens 469008 Escherichia coli BL21(DE3) BL21 (DE3) Plasmid pSMT3 1 4.56 73.05 VAPOR DIFFUSION, HANGING DROP 5.0 16% PEG 400, 5mM Magnesium Chloride, 100mM Sodium Acetate, 15mM DTT, VAPOR DIFFUSION, HANGING DROP, temperature 277.2K, pH 5.0 277.2 software chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_ref_seq_dif struct_site repository Initial release Version format compliance Advisory Derived calculations Version format compliance Refinement description Data collection Database references Derived calculations Refinement description 1 0 2005-01-25 1 1 2008-04-29 1 2 2011-07-13 1 3 2017-10-11 1 4 2023-08-23 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id C-TERMINAL DOMAIN OF MOUSE BRAIN TUBBY PROTEIN C-Terminal Domain Of Mouse Brain Tubby Protein Bound To Phosphatidylinositol 4,5-Bis-Phosphate RCSB Y RCSB 2004-01-12 REL REL PGE TRIETHYLENE GLYCOL HOH water 1C8Z PDB ENTRY 1C8Z PDB experimental model PGE 1 2 PGE PGE 1 A HOH 562 3 HOH HOH 562 A HOH 565 3 HOH HOH 565 A HOH 566 3 HOH HOH 566 A HOH 568 3 HOH HOH 568 A HOH 569 3 HOH HOH 569 A HOH 570 3 HOH HOH 570 A HOH 571 3 HOH HOH 571 A HOH 572 3 HOH HOH 572 A HOH 574 3 HOH HOH 574 A HOH 575 3 HOH HOH 575 A HOH 576 3 HOH HOH 576 A HOH 580 3 HOH HOH 580 A HOH 581 3 HOH HOH 581 A HOH 582 3 HOH HOH 582 A HOH 584 3 HOH HOH 584 A HOH 612 3 HOH HOH 612 A HOH 613 3 HOH HOH 613 A HOH 614 3 HOH HOH 614 A HOH 615 3 HOH HOH 615 A HOH 621 3 HOH HOH 621 A HOH 622 3 HOH HOH 622 A HOH 624 3 HOH HOH 624 A HOH 625 3 HOH HOH 625 A HOH 626 3 HOH HOH 626 A HOH 629 3 HOH HOH 629 A HOH 630 3 HOH HOH 630 A HOH 631 3 HOH HOH 631 A HOH 632 3 HOH HOH 632 A HOH 633 3 HOH HOH 633 A HOH 634 3 HOH HOH 634 A HOH 635 3 HOH HOH 635 A HOH 636 3 HOH HOH 636 A HOH 637 3 HOH HOH 637 A HOH 638 3 HOH HOH 638 A HOH 639 3 HOH HOH 639 A HOH 642 3 HOH HOH 642 A HOH 643 3 HOH HOH 643 A HOH 644 3 HOH HOH 644 A HOH 645 3 HOH HOH 645 A HOH 646 3 HOH HOH 646 A HOH 648 3 HOH HOH 648 A HOH 649 3 HOH HOH 649 A HOH 650 3 HOH HOH 650 A HOH 651 3 HOH HOH 651 A HOH 652 3 HOH HOH 652 A HOH 654 3 HOH HOH 654 A HOH 655 3 HOH HOH 655 A HOH 656 3 HOH HOH 656 A HOH 659 3 HOH HOH 659 A HOH 660 3 HOH HOH 660 A HOH 662 3 HOH HOH 662 A HOH 663 3 HOH HOH 663 A HOH 664 3 HOH HOH 664 A HOH 665 3 HOH HOH 665 A HOH 666 3 HOH HOH 666 A HOH 667 3 HOH HOH 667 A HOH 668 3 HOH HOH 668 A HOH 670 3 HOH HOH 670 A HOH 673 3 HOH HOH 673 A HOH 674 3 HOH HOH 674 A HOH 677 3 HOH HOH 677 A HOH 679 3 HOH HOH 679 A HOH 680 3 HOH HOH 680 A HOH 681 3 HOH HOH 681 A HOH 683 3 HOH HOH 683 A HOH 685 3 HOH HOH 685 A HOH 686 3 HOH HOH 686 A HOH 687 3 HOH HOH 687 A HOH 689 3 HOH HOH 689 A HOH 691 3 HOH HOH 691 A HOH 692 3 HOH HOH 692 A HOH 693 3 HOH HOH 693 A HOH 694 3 HOH HOH 694 A HOH 695 3 HOH HOH 695 A HOH 708 3 HOH HOH 708 A HOH 716 3 HOH HOH 716 A HOH 718 3 HOH HOH 718 A HOH 719 3 HOH HOH 719 A HOH 722 3 HOH HOH 722 A HOH 723 3 HOH HOH 723 A HOH 724 3 HOH HOH 724 A HOH 725 3 HOH HOH 725 A HOH 729 3 HOH HOH 729 A HOH 735 3 HOH HOH 735 A HOH 736 3 HOH HOH 736 A HOH 738 3 HOH HOH 738 A HOH 741 3 HOH HOH 741 A HOH 745 3 HOH HOH 745 A HOH 747 3 HOH HOH 747 A HOH 748 3 HOH HOH 748 A 31.700 72.500 4.000 4.000 8.000 8.000 ALA 289 n 1 ALA 289 A PRO 290 n 2 PRO 290 A SER 291 n 3 SER 291 A PRO 292 n 4 PRO 292 A THR 293 n 5 THR 293 A ALA 294 n 6 ALA 294 A PRO 295 n 7 PRO 295 A GLU 296 n 8 GLU 296 A GLN 297 n 9 GLN 297 A PRO 298 n 10 PRO 298 A VAL 299 n 11 VAL 299 A ASP 300 n 12 ASP 300 A VAL 301 n 13 VAL 301 A GLU 302 n 14 GLU 302 A VAL 303 n 15 VAL 303 A GLN 304 n 16 GLN 304 A ASP 305 n 17 ASP 305 A LEU 306 n 18 LEU 306 A GLU 307 n 19 GLU 307 A GLU 308 n 20 GLU 308 A PHE 309 n 21 PHE 309 A ALA 310 n 22 ALA 310 A LEU 311 n 23 LEU 311 A ARG 312 n 24 ARG 312 A PRO 313 n 25 PRO 313 A ALA 314 n 26 ALA 314 A PRO 315 n 27 PRO 315 A GLN 316 n 28 GLN 316 A GLY 317 n 29 GLY 317 A ILE 318 n 30 ILE 318 A THR 319 n 31 THR 319 A ILE 320 n 32 ILE 320 A LYS 321 n 33 LYS 321 A CYS 322 n 34 CYS 322 A ARG 323 n 35 ARG 323 A ILE 324 n 36 ILE 324 A THR 325 n 37 THR 325 A ARG 326 n 38 ARG 326 A ASP 327 n 39 ASP 327 A LYS 328 n 40 LYS 328 A LYS 329 n 41 LYS 329 A GLY 330 n 42 GLY 330 A MET 331 n 43 MET 331 A ASP 332 n 44 ASP 332 A ARG 333 n 45 ARG 333 A GLY 334 n 46 GLY 334 A MET 335 n 47 MET 335 A PHE 336 n 48 PHE 336 A PRO 337 n 49 PRO 337 A THR 338 n 50 THR 338 A TYR 339 n 51 TYR 339 A PHE 340 n 52 PHE 340 A LEU 341 n 53 LEU 341 A HIS 342 n 54 HIS 342 A LEU 343 n 55 LEU 343 A ASP 344 n 56 ASP 344 A ARG 345 n 57 ARG 345 A GLU 346 n 58 GLU 346 A ASP 347 n 59 ASP 347 A GLY 348 n 60 GLY 348 A LYS 349 n 61 LYS 349 A LYS 350 n 62 LYS 350 A VAL 351 n 63 VAL 351 A PHE 352 n 64 PHE 352 A LEU 353 n 65 LEU 353 A LEU 354 n 66 LEU 354 A ALA 355 n 67 ALA 355 A GLY 356 n 68 GLY 356 A ARG 357 n 69 ARG 357 A LYS 358 n 70 LYS 358 A ARG 359 n 71 ARG 359 A LYS 360 n 72 LYS 360 A LYS 361 n 73 LYS 361 A SER 362 n 74 SER 362 A LYS 363 n 75 LYS 363 A THR 364 n 76 THR 364 A SER 365 n 77 SER 365 A ASN 366 n 78 ASN 366 A TYR 367 n 79 TYR 367 A LEU 368 n 80 LEU 368 A ILE 369 n 81 ILE 369 A SER 370 n 82 SER 370 A VAL 371 n 83 VAL 371 A ASP 372 n 84 ASP 372 A PRO 373 n 85 PRO 373 A THR 374 n 86 THR 374 A ASP 375 n 87 ASP 375 A LEU 376 n 88 LEU 376 A SER 377 n 89 SER 377 A ARG 378 n 90 ARG 378 A GLY 379 n 91 GLY 379 A GLY 380 n 92 GLY 380 A ASP 381 n 93 ASP 381 A SER 382 n 94 SER 382 A TYR 383 n 95 TYR 383 A ILE 384 n 96 ILE 384 A GLY 385 n 97 GLY 385 A LYS 386 n 98 LYS 386 A LEU 387 n 99 LEU 387 A ARG 388 n 100 ARG 388 A SER 389 n 101 SER 389 A ASN 390 n 102 ASN 390 A LEU 391 n 103 LEU 391 A MET 392 n 104 MET 392 A GLY 393 n 105 GLY 393 A THR 394 n 106 THR 394 A LYS 395 n 107 LYS 395 A PHE 396 n 108 PHE 396 A THR 397 n 109 THR 397 A VAL 398 n 110 VAL 398 A TYR 399 n 111 TYR 399 A ASP 400 n 112 ASP 400 A ASN 401 n 113 ASN 401 A GLY 402 n 114 GLY 402 A VAL 403 n 115 VAL 403 A ASN 404 n 116 ASN 404 A PRO 405 n 117 PRO 405 A GLN 406 n 118 GLN 406 A LYS 407 n 119 LYS 407 A ALA 408 n 120 ALA 408 A SER 409 n 121 SER 409 A SER 410 n 122 SER 410 A SER 411 n 123 SER 411 A THR 412 n 124 THR 412 A LEU 413 n 125 LEU 413 A GLU 414 n 126 GLU 414 A SER 415 n 127 SER 415 A GLY 416 n 128 GLY 416 A THR 417 n 129 THR 417 A LEU 418 n 130 LEU 418 A ARG 419 n 131 ARG 419 A GLN 420 n 132 GLN 420 A GLU 421 n 133 GLU 421 A LEU 422 n 134 LEU 422 A ALA 423 n 135 ALA 423 A ALA 424 n 136 ALA 424 A VAL 425 n 137 VAL 425 A CYS 426 n 138 CYS 426 A TYR 427 n 139 TYR 427 A GLU 428 n 140 GLU 428 A THR 429 n 141 THR 429 A ASN 430 n 142 ASN 430 A VAL 431 n 143 VAL 431 A LEU 432 n 144 LEU 432 A GLY 433 n 145 GLY 433 A PHE 434 n 146 PHE 434 A LYS 435 n 147 LYS 435 A GLY 436 n 148 GLY 436 A PRO 437 n 149 PRO 437 A ARG 438 n 150 ARG 438 A LYS 439 n 151 LYS 439 A MET 440 n 152 MET 440 A SER 441 n 153 SER 441 A VAL 442 n 154 VAL 442 A ILE 443 n 155 ILE 443 A VAL 444 n 156 VAL 444 A PRO 445 n 157 PRO 445 A GLY 446 n 158 GLY 446 A MET 447 n 159 MET 447 A ASN 448 n 160 ASN 448 A MET 449 n 161 MET 449 A VAL 450 n 162 VAL 450 A HIS 451 n 163 HIS 451 A GLU 452 n 164 GLU 452 A ARG 453 n 165 ARG 453 A VAL 454 n 166 VAL 454 A SER 455 n 167 SER 455 A ILE 456 n 168 ILE 456 A ARG 457 n 169 ARG 457 A PRO 458 n 170 PRO 458 A ARG 459 n 171 ARG 459 A ASN 460 n 172 ASN 460 A GLU 461 n 173 GLU 461 A HIS 462 n 174 HIS 462 A GLU 463 n 175 GLU 463 A THR 464 n 176 THR 464 A LEU 465 n 177 LEU 465 A LEU 466 n 178 LEU 466 A ALA 467 n 179 ALA 467 A ARG 468 n 180 ARG 468 A TRP 469 n 181 TRP 469 A GLN 470 n 182 GLN 470 A ASN 471 n 183 ASN 471 A LYS 472 n 184 LYS 472 A ASN 473 n 185 ASN 473 A THR 474 n 186 THR 474 A GLU 475 n 187 GLU 475 A SER 476 n 188 SER 476 A ILE 477 n 189 ILE 477 A ILE 478 n 190 ILE 478 A GLU 479 n 191 GLU 479 A LEU 480 n 192 LEU 480 A GLN 481 n 193 GLN 481 A ASN 482 n 194 ASN 482 A LYS 483 n 195 LYS 483 A THR 484 n 196 THR 484 A PRO 485 n 197 PRO 485 A VAL 486 n 198 VAL 486 A TRP 487 n 199 TRP 487 A ASN 488 n 200 ASN 488 A ASP 489 n 201 ASP 489 A ASP 490 n 202 ASP 490 A THR 491 n 203 THR 491 A GLN 492 n 204 GLN 492 A SER 493 n 205 SER 493 A TYR 494 n 206 TYR 494 A VAL 495 n 207 VAL 495 A LEU 496 n 208 LEU 496 A ASN 497 n 209 ASN 497 A PHE 498 n 210 PHE 498 A HIS 499 n 211 HIS 499 A GLY 500 n 212 GLY 500 A ARG 501 n 213 ARG 501 A VAL 502 n 214 VAL 502 A THR 503 n 215 THR 503 A GLN 504 n 216 GLN 504 A ALA 505 n 217 ALA 505 A SER 506 n 218 SER 506 A VAL 507 n 219 VAL 507 A LYS 508 n 220 LYS 508 A ASN 509 n 221 ASN 509 A PHE 510 n 222 PHE 510 A GLN 511 n 223 GLN 511 A ILE 512 n 224 ILE 512 A ILE 513 n 225 ILE 513 A HIS 514 n 226 HIS 514 A GLY 515 n 227 GLY 515 A ASN 516 n 228 ASN 516 A ASP 517 n 229 ASP 517 A PRO 518 n 230 PRO 518 A ASP 519 n 231 ASP 519 A TYR 520 n 232 TYR 520 A ILE 521 n 233 ILE 521 A VAL 522 n 234 VAL 522 A MET 523 n 235 MET 523 A GLN 524 n 236 GLN 524 A PHE 525 n 237 PHE 525 A GLY 526 n 238 GLY 526 A ARG 527 n 239 ARG 527 A VAL 528 n 240 VAL 528 A ALA 529 n 241 ALA 529 A GLU 530 n 242 GLU 530 A ASP 531 n 243 ASP 531 A VAL 532 n 244 VAL 532 A PHE 533 n 245 PHE 533 A THR 534 n 246 THR 534 A MET 535 n 247 MET 535 A ASP 536 n 248 ASP 536 A TYR 537 n 249 TYR 537 A ASN 538 n 250 ASN 538 A TYR 539 n 251 TYR 539 A PRO 540 n 252 PRO 540 A LEU 541 n 253 LEU 541 A CYS 542 n 254 CYS 542 A ALA 543 n 255 ALA 543 A LEU 544 n 256 LEU 544 A GLN 545 n 257 GLN 545 A ALA 546 n 258 ALA 546 A PHE 547 n 259 PHE 547 A ALA 548 n 260 ALA 548 A ILE 549 n 261 ILE 549 A ALA 550 n 262 ALA 550 A LEU 551 n 263 LEU 551 A SER 552 n 264 SER 552 A SER 553 n 265 SER 553 A PHE 554 n 266 PHE 554 A ASP 555 n 267 ASP 555 A SER 556 n 268 SER 556 A LYS 557 n 269 LYS 557 A LEU 558 n 270 LEU 558 A ALA 559 n 271 ALA 559 A CYS 560 n 272 CYS 560 A GLU 561 n 273 GLU 561 A 1.5789 0.9031 0.1422 2.8262 -0.3490 0.7035 -0.0774 -0.0139 0.2364 -0.0491 0.1017 0.3134 -0.1653 0.0078 -0.0244 0.0595 -0.0229 -0.0135 0.0593 -0.0334 0.1429 refined 121.8740 21.1890 73.1110 X-RAY DIFFRACTION A 289 A 1 A 561 A 273 X-RAY DIFFRACTION 1 ALL author_defined_assembly 1 monomeric software_defined_assembly PISA,PQS 2 dimeric 3120 -11 27120 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 4_556 x,-y,-z+1 crystal symmetry operation 0.0000000000 0.0000000000 149.9810000000 A N ASP 327 A N ASP 39 A O THR 338 A O THR 50 A N LEU 343 A N LEU 55 A O VAL 351 A O VAL 63 A N ALA 355 A N ALA 67 A O SER 370 A O SER 82 A N ILE 369 A N ILE 81 A O GLY 385 A O GLY 97 A N ARG 388 A N ARG 100 A O THR 397 A O THR 109 A N VAL 398 A N VAL 110 A O ALA 423 A O ALA 135 A N CYS 426 A N CYS 138 A O SER 441 A O SER 153 A N VAL 442 A N VAL 154 A O LEU 480 A O LEU 192 A N GLN 481 A N GLN 193 A O ILE 513 A O ILE 225 A N ILE 512 A N ILE 224 A O MET 523 A O MET 235 A N GLY 526 A N GLY 238 A O THR 534 A O THR 246 A O PHE 533 A O PHE 245 A N ILE 324 A N ILE 36 A N ASN 488 A N ASN 200 A O SER 493 A O SER 205 1 A CG LYS 361 A CG LYS 73 1 Y 1 A CD LYS 361 A CD LYS 73 1 Y 1 A CE LYS 361 A CE LYS 73 1 Y 1 A NZ LYS 361 A NZ LYS 73 1 Y 1 A CG LYS 363 A CG LYS 75 1 Y 1 A CD LYS 363 A CD LYS 75 1 Y 1 A CE LYS 363 A CE LYS 75 1 Y 1 A NZ LYS 363 A NZ LYS 75 1 Y 1 A CG LYS 407 A CG LYS 119 1 Y 1 A CD LYS 407 A CD LYS 119 1 Y 1 A CE LYS 407 A CE LYS 119 1 Y 1 A NZ LYS 407 A NZ LYS 119 1 Y 1 A CG GLU 461 A CG GLU 173 1 Y 1 A CD GLU 461 A CD GLU 173 1 Y 1 A OE1 GLU 461 A OE1 GLU 173 1 Y 1 A OE2 GLU 461 A OE2 GLU 173 1 Y 1 A CG LEU 558 A CG LEU 270 1 Y 1 A CD1 LEU 558 A CD1 LEU 270 1 Y 1 A CD2 LEU 558 A CD2 LEU 270 1 Y 1 A C GLU 561 A C GLU 273 1 Y 1 A CD GLU 561 A CD GLU 273 1 Y 1 A OE1 GLU 561 A OE1 GLU 273 1 Y 1 A OE2 GLU 561 A OE2 GLU 273 1 Y 1 A A ASP SER 555 556 -146.94 1 A A LYS LEU 557 558 -140.35 1 6.26 0.90 118.30 124.56 A A A CB CG OD2 ASP ASP ASP 300 300 300 N 1 5.86 0.90 118.30 124.16 A A A CB CG OD2 ASP ASP ASP 327 327 327 N 1 5.57 0.90 118.30 123.87 A A A CB CG OD2 ASP ASP ASP 372 372 372 N 1 5.43 0.90 118.30 123.73 A A A CB CG OD2 ASP ASP ASP 490 490 490 N 1 A GLN 304 -103.88 -102.05 1 A LEU 353 -120.60 -54.05 1 A LYS 363 -93.61 33.45 1 A THR 364 -124.28 -90.47 1 A SER 365 162.83 114.78 1 A PRO 405 -73.35 33.45 1 A LEU 413 -61.55 9.00 1 A PHE 434 -46.40 57.92 1 A VAL 454 -61.01 -167.18 1 A SER 556 -33.31 123.04 33.802 0.946 0.918 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 0.2264 0.1814 0.1836 2.704 18.474 767 14674 14674 4.967 100 14.137 0.155 0.312 Random LIKELY RESIDUAL 1 THROUGHOUT 0 0 MOLECULAR REPLACEMENT 0.243 0.800 0.800 1.200 PDB ENTRY 1C8Z Engh & Huber BABINET MODEL PLUS MASK 2.704 18.474 90 2238 10 0 2138 0.017 0.022 2189 0.001 0.020 1976 1.612 1.944 2959 0.899 3.000 4600 7.722 5.000 271 35.395 23.922 102 20.368 15.000 373 21.636 15.000 17 0.099 0.200 326 0.005 0.020 2434 0.001 0.020 441 0.226 0.200 425 0.200 0.200 1985 0.184 0.200 1089 0.095 0.200 1379 0.146 0.200 95 0.271 0.200 7 0.282 0.200 28 0.121 0.200 6 1.080 1.500 1384 0.138 1.500 550 1.903 2.000 2200 0.948 2.000 1860 1.952 3.000 889 0.641 3.000 1694 3.361 4.500 759 1.468 4.500 2740 0.281 0.228 2.7729 72 1033 1105 0.32 0.213 2.8471 40 1021 1061 0.207 0.216 2.9276 57 1016 1073 0.232 0.215 3.0154 38 1002 1040 0.288 0.192 3.1115 47 937 984 0.253 0.192 3.2174 57 912 969 0.23 0.189 3.3350 43 883 926 0.219 0.188 3.4665 39 862 901 0.216 0.184 3.6148 43 813 856 0.279 0.188 3.7840 45 786 831 0.233 0.183 3.9795 37 749 786 0.181 0.172 4.2087 40 723 763 0.182 0.145 4.4827 48 658 706 0.237 0.142 4.8182 35 636 671 0.219 0.159 5.2426 20 589 609 0.246 0.186 5.8033 27 542 569 0.289 0.211 6.5935 20 496 516 0.264 0.195 7.8298 23 418 441 0.176 0.156 10.1952 23 344 367 0.149 0.179 18.4742 13 254 267 2.70 20.0 1S31 15560 15503 0 -3 0.096 1 30.9 24.0 100.000 0.344 2.70 2.80 10.1 1511 1 99.7 100.000 data reduction Zbyszek Otwinowski zbyszek@mix.swmed.edu http://www.lnls.br/infra/linhasluz/denzo-hkl.htm DENZO package data scaling Zbyszek Otwinowski zbyszek@mix.swmed.edu http://www.lnls.br/infra/linhasluz/denzo-hkl.htm SCALEPACK package phasing Jorge Navaza ccp4@dl.ac.uk Fortran http://www.ccp4.ac.uk/main.html AMoRE program CCP4 4.2 refinement Murshudov, G.N. ccp4@dl.ac.uk Fortran http://www.ccp4.ac.uk/main.html REFMAC program Crystal Structure Analysis of the human Tub protein (isoform a) spanning residues 289 through 561 1 N N 2 N N 3 N N A ASP 305 A ASP 17 HELX_P A LEU 311 A LEU 23 1 1 7 A GLY 330 A GLY 42 HELX_P A GLY 334 A GLY 46 5 2 5 A ASP 372 A ASP 84 HELX_P A ARG 378 A ARG 90 1 3 7 A ASN 460 A ASN 172 HELX_P A GLU 463 A GLU 175 5 4 4 A THR 464 A THR 176 HELX_P A ASN 471 A ASN 183 1 5 8 A CYS 542 A CYS 254 HELX_P A SER 556 A SER 268 1 6 15 SIGNALING PROTEIN BETA BARREL, HYDROPHOBIC HELIX, HYDROPHOBIC CORE, Signaling Protein A TYR 539 A TYR 251 1 A PRO 540 A PRO 252 20.22 TUB_HUMAN UNP 1 289 P50607 APSPTAPEQPVDVEVQDLEEFALRPAPQGITIKCRITRDKKGMDRGMYPTYFLHLDREDGKKVFLLAGRKRKKSKTSNYL ISVDPTDLSRGGDSYIGKLRSNLMGTKFTVYDNGVNPQKASSSTLESGTLRQELAAVCYETNVLGFKGPRKMSVIVPGMN MVHERVSIRPRNEHETLLARWQNKNTESIIELQNKTPVWNDDTQSYVLNFHGRVTQASVKNFQIIHGNDPDYIVMQFGRV AEDVFTMDYNYPLCALQAFAIALSSFDSKLACE 289 561 1S31 289 561 P50607 A 1 1 273 1 TYR conflict PHE 336 1S31 A P50607 UNP 336 48 13 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A ILE 320 A ILE 32 A ASP 327 A ASP 39 A THR 338 A THR 50 A ASP 344 A ASP 56 A LYS 350 A LYS 62 A LYS 358 A LYS 70 A ASN 366 A ASN 78 A SER 370 A SER 82 A GLY 385 A GLY 97 A SER 389 A SER 101 A LYS 395 A LYS 107 A ASP 400 A ASP 112 A GLU 421 A GLU 133 A TYR 427 A TYR 139 A MET 440 A MET 152 A PRO 445 A PRO 157 A ILE 477 A ILE 189 A ASN 482 A ASN 194 A PHE 510 A PHE 222 A HIS 514 A HIS 226 A MET 523 A MET 235 A ALA 529 A ALA 241 A VAL 532 A VAL 244 A TYR 537 A TYR 249 A ILE 320 A ILE 32 A ASP 327 A ASP 39 A VAL 486 A VAL 198 A ASN 488 A ASN 200 A SER 493 A SER 205 A VAL 495 A VAL 207 BINDING SITE FOR RESIDUE PGE A 1 A PGE 1 Software 5 A THR 325 A THR 37 5 1_555 A PHE 340 A PHE 52 5 1_555 A HIS 342 A HIS 54 5 1_555 A PHE 352 A PHE 64 5 1_555 A HOH 695 C HOH 5 1_555 197 I 2 3