1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 DeRose, E.F. Kirby, T.W. Mueller, G.A. Chikova, A.K. Schaaper, R.M. London, R.E. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C Y 128 N C Y 129 N N Y 130 N C Y 131 N C Y 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N N N 145 S C N 146 N C N 147 N O N 148 S C N 149 N C N 150 N C N 151 N C N 152 N O N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N N N 167 S C N 168 N C N 169 N O N 170 N C N 171 N C N 172 N C N 173 N C N 174 N O N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N N N 189 S C N 190 N C N 191 N O N 192 N C N 193 N C N 194 N C N 195 N C N 196 N N N 197 N O N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N N N 214 S C N 215 N C N 216 N O N 217 N C N 218 N C N 219 N S N 220 N C N 221 N O N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N N N 234 S C N 235 N C N 236 N O N 237 N C Y 238 N C Y 239 N C Y 240 N C Y 241 N C Y 242 N C Y 243 N C N 244 N O N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N N N 257 S C N 258 N C N 259 N O N 260 N C N 261 N C N 262 N C N 263 N O N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N O N 279 N O N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N N N 288 S C N 289 N C N 290 N O N 291 R C N 292 N O N 293 N C N 294 N O N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 N C Y 309 N C Y 310 N C Y 311 N C Y 312 N N Y 313 N C Y 314 N C Y 315 N C Y 316 N C Y 317 N C N 318 N O N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N N N 332 S C N 333 N C N 334 N O N 335 N C Y 336 N C Y 337 N C Y 338 N C Y 339 N C Y 340 N C Y 341 N C N 342 N O N 343 N O N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N N N 356 S C N 357 N C N 358 N O N 359 N C N 360 N C N 361 N C N 362 N O N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N doub N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N doub N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N doub N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N doub N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N doub N 229 N sing N 230 N sing N 231 N sing N 232 N sing Y 233 N doub Y 234 N sing Y 235 N sing N 236 N sing Y 237 N doub N 238 N sing Y 239 N doub N 240 N sing Y 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N doub N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N doub N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N doub N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N doub N 298 N sing N 299 N sing N 300 N sing N 301 N sing Y 302 N doub Y 303 N sing Y 304 N sing N 305 N sing Y 306 N doub Y 307 N sing Y 308 N sing N 309 N sing Y 310 N sing Y 311 N doub N 312 N sing Y 313 N doub N 314 N sing Y 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N doub N 326 N sing N 327 N sing N 328 N sing N 329 N sing Y 330 N doub Y 331 N sing Y 332 N sing N 333 N sing Y 334 N doub N 335 N sing Y 336 N doub N 337 N sing Y 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N doub N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing UK Structure STRUE6 2005 0969-2126 12 2221 2231 10.1016/j.str.2004.09.019 15576035 Phage Like It HOT: Solution Structure of the Bacteriophage P1-Encoded HOT Protein, a Homolog of the theta Subunit of E. coli DNA Polymerase III 2004 10.2210/pdb1se7/pdb pdb_00001se7 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 SINGLE WAVELENGTH M 1 1.0 9709.967 HOMOLOGUE OF THE THETA SUBUNIT OF DNA POLYMERASE III 1 man polymer HOT no no MYDWNIAAKSQEERDKVNVDLAASGVAYKERLNIPVIAEQVAREQPENLRTYFMERLRHYRQLSLQLPKGSDPAYQKDDA VKK MYDWNIAAKSQEERDKVNVDLAASGVAYKERLNIPVIAEQVAREQPENLRTYFMERLRHYRQLSLQLPKGSDPAYQKDDA VKK A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n P1-like viruses Escherichia sample HOT 10678 Enterobacteria phage P1 562 Escherichia coli BLR(DE3) plasmid pET30HOT database_2 pdbx_struct_assembly pdbx_struct_oper_list chem_comp_atom chem_comp_bond repository Initial release Version format compliance Version format compliance Database references Derived calculations Data collection 1 0 2004-12-14 1 1 2008-04-29 1 2 2011-07-13 1 3 2022-03-02 1 4 2024-05-22 _database_2.pdbx_DOI _database_2.pdbx_database_accession RCSB Y RCSB 2004-02-16 REL REL The structure was determined using triple-resonance NMR spectroscopy. structures with the lowest energy 20 7 3D_13C-separated_NOESY 3D_15N-separated_NOESY 100mM NaCl 7 ambient 298 K The structures were computed using default ARIA parameters, with qrelax set to false. 430 manually assigned NOE distance restraints were included, and qshift and qexclude were set to false for the manually assigned NOEs. ARIA assigned 1140 unambiguous and 435 ambiguous NOE distance restraints. 51 dihedral restraints, 46 hydrogen bond restraints, and 36 backbone amide residual dipolar couplings were also used in the calculation. simulated annealing, molecular dynamics, torsion angle dynamics 1 lowest energy 1.3mM U-[13C,15N] protein, 5mM Tris, 100mM NaCl, 5mM NaN3 90% H2O/10% D2O processing NMRPipe 2.1 Rev 2002.044.17.08 data analysis NMRView 5.0.4 structure solution ARIA 1.2 structure solution CNS 1.1 refinement CNS 1.1 600 Varian INOVA MET 1 n 1 MET 1 A TYR 2 n 2 TYR 2 A ASP 3 n 3 ASP 3 A TRP 4 n 4 TRP 4 A ASN 5 n 5 ASN 5 A ILE 6 n 6 ILE 6 A ALA 7 n 7 ALA 7 A ALA 8 n 8 ALA 8 A LYS 9 n 9 LYS 9 A SER 10 n 10 SER 10 A GLN 11 n 11 GLN 11 A GLU 12 n 12 GLU 12 A GLU 13 n 13 GLU 13 A ARG 14 n 14 ARG 14 A ASP 15 n 15 ASP 15 A LYS 16 n 16 LYS 16 A VAL 17 n 17 VAL 17 A ASN 18 n 18 ASN 18 A VAL 19 n 19 VAL 19 A ASP 20 n 20 ASP 20 A LEU 21 n 21 LEU 21 A ALA 22 n 22 ALA 22 A ALA 23 n 23 ALA 23 A SER 24 n 24 SER 24 A GLY 25 n 25 GLY 25 A VAL 26 n 26 VAL 26 A ALA 27 n 27 ALA 27 A TYR 28 n 28 TYR 28 A LYS 29 n 29 LYS 29 A GLU 30 n 30 GLU 30 A ARG 31 n 31 ARG 31 A LEU 32 n 32 LEU 32 A ASN 33 n 33 ASN 33 A ILE 34 n 34 ILE 34 A PRO 35 n 35 PRO 35 A VAL 36 n 36 VAL 36 A ILE 37 n 37 ILE 37 A ALA 38 n 38 ALA 38 A GLU 39 n 39 GLU 39 A GLN 40 n 40 GLN 40 A VAL 41 n 41 VAL 41 A ALA 42 n 42 ALA 42 A ARG 43 n 43 ARG 43 A GLU 44 n 44 GLU 44 A GLN 45 n 45 GLN 45 A PRO 46 n 46 PRO 46 A GLU 47 n 47 GLU 47 A ASN 48 n 48 ASN 48 A LEU 49 n 49 LEU 49 A ARG 50 n 50 ARG 50 A THR 51 n 51 THR 51 A TYR 52 n 52 TYR 52 A PHE 53 n 53 PHE 53 A MET 54 n 54 MET 54 A GLU 55 n 55 GLU 55 A ARG 56 n 56 ARG 56 A LEU 57 n 57 LEU 57 A ARG 58 n 58 ARG 58 A HIS 59 n 59 HIS 59 A TYR 60 n 60 TYR 60 A ARG 61 n 61 ARG 61 A GLN 62 n 62 GLN 62 A LEU 63 n 63 LEU 63 A SER 64 n 64 SER 64 A LEU 65 n 65 LEU 65 A GLN 66 n 66 GLN 66 A LEU 67 n 67 LEU 67 A PRO 68 n 68 PRO 68 A LYS 69 n 69 LYS 69 A GLY 70 n 70 GLY 70 A SER 71 n 71 SER 71 A ASP 72 n 72 ASP 72 A PRO 73 n 73 PRO 73 A ALA 74 n 74 ALA 74 A TYR 75 n 75 TYR 75 A GLN 76 n 76 GLN 76 A LYS 77 n 77 LYS 77 A ASP 78 n 78 ASP 78 A ASP 79 n 79 ASP 79 A ALA 80 n 80 ALA 80 A VAL 81 n 81 VAL 81 A LYS 82 n 82 LYS 82 A LYS 83 n 83 LYS 83 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 4 A A O HH ALA TYR 23 60 1.50 6 A A HH HH21 TYR ARG 52 56 1.26 1 A TYR 2 56.65 -163.78 1 A TRP 4 -148.86 -21.79 1 A ASN 5 -88.10 38.06 1 A LEU 32 -78.57 -86.70 1 A ASN 33 178.24 20.20 1 A LEU 67 -44.29 170.02 1 A PRO 68 -58.84 -156.49 1 A LYS 69 -45.62 163.69 1 A SER 71 -178.60 79.97 1 A ASP 78 58.99 8.38 1 A ASP 79 59.07 18.28 1 A ALA 80 -94.73 -64.83 2 A TYR 2 57.67 -170.71 2 A TRP 4 -160.12 -12.24 2 A ASN 5 -81.88 38.75 2 A LYS 9 -120.74 -50.70 2 A LEU 32 73.36 -140.17 2 A GLU 44 -121.21 -69.71 2 A ASN 48 -58.01 -6.74 2 A LEU 67 -43.62 165.47 2 A PRO 68 -69.00 -100.62 2 A SER 71 -128.77 -145.56 2 A ALA 74 -90.53 37.35 2 A ASP 79 -143.39 -27.12 2 A VAL 81 47.55 74.06 3 A TRP 4 -151.34 -7.79 3 A ASN 5 -90.47 33.63 3 A ALA 7 -94.52 30.56 3 A SER 10 -68.69 -162.66 3 A GLN 11 -100.84 -63.92 3 A GLU 30 -65.25 9.21 3 A ARG 31 -123.05 -61.69 3 A LEU 32 -103.03 -141.80 3 A ASN 33 -111.42 74.50 3 A GLN 45 52.78 76.68 3 A LEU 67 -49.20 171.45 3 A LYS 69 57.86 132.74 3 A ASP 79 -120.86 -72.53 3 A ALA 80 -172.49 76.43 4 A TRP 4 173.61 151.90 4 A GLU 30 -66.36 7.37 4 A ARG 31 -122.18 -63.75 4 A LEU 32 -91.68 -132.08 4 A GLU 44 -120.98 -69.18 4 A PRO 68 -64.76 -165.55 4 A LYS 69 56.60 -113.76 4 A GLN 76 -54.99 170.59 4 A ASP 79 -66.74 -70.02 4 A ALA 80 -172.72 -19.50 5 A TRP 4 -150.87 -19.87 5 A ASN 5 -87.92 41.25 5 A GLU 30 -68.80 9.16 5 A ARG 31 -121.15 -67.74 5 A LEU 32 -94.01 -128.96 5 A PRO 35 -68.01 81.56 5 A GLU 44 -121.03 -69.44 5 A GLN 45 40.76 70.38 5 A ASN 48 -65.55 10.66 5 A LEU 67 -60.45 -167.93 5 A PRO 68 -68.62 -103.12 5 A LYS 69 41.79 -154.34 5 A SER 71 -79.56 -159.59 5 A ALA 74 -64.99 11.92 5 A ASP 79 -157.84 75.33 6 A TRP 4 -165.60 0.76 6 A LYS 9 -96.89 -68.76 6 A GLU 30 -37.84 -31.73 6 A LEU 32 76.94 -34.55 6 A ASN 33 75.69 78.33 6 A GLU 44 -121.15 -69.47 6 A GLN 45 33.57 75.53 6 A ASN 48 -71.58 23.88 6 A LEU 49 -158.28 4.24 6 A PRO 68 -85.56 -107.23 6 A SER 71 62.60 175.91 6 A ASP 79 -142.53 -49.20 6 A ALA 80 -160.53 15.06 7 A TRP 4 -165.22 -30.53 7 A ILE 6 58.31 1.33 7 A ALA 8 -153.03 87.91 7 A LYS 9 -107.50 -75.66 7 A GLU 30 -64.37 10.03 7 A ARG 31 -128.60 -58.84 7 A LEU 32 -104.90 -145.56 7 A LEU 67 -47.48 170.09 7 A PRO 68 -62.36 -163.44 7 A LYS 69 62.49 -82.84 7 A SER 71 56.98 -170.30 7 A TYR 75 51.28 -174.42 Solution structure of the E. coli bacteriophage P1 encoded HOT protein: a homologue of the theta subunit of E. coli DNA polymerase III 1 N N A SER 10 A SER 10 HELX_P A LEU 32 A LEU 32 1 1 23 A ILE 37 A ILE 37 HELX_P A ARG 43 A ARG 43 1 2 7 A PRO 46 A PRO 46 HELX_P A ASN 48 A ASN 48 5 3 3 A LEU 49 A LEU 49 HELX_P A LEU 67 A LEU 67 1 4 19 TRANSFERASE E. COLI BACTERIOPHAGE P1, HOMOLOGUE OF THETA, HOT, E. COLI DNA POLYMERASE III, Transferase Q71T70_BPP1 UNP 1 Q71T70 5 87 1SE7 1 83 Q71T70 A 1 1 83