0.019530 0.000000 0.000000 0.000000 0.010816 0.000000 0.000000 0.000000 0.020828 0.00000 0.00000 0.00000 Ha, S.C. Van Quyen, D. Wu, C.A. Lowenhaupt, K. Rich, A. Kim, Y.G. Kim, K.K. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 51.203 92.452 48.012 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N O N 89 N P N 90 N O N 91 N O N 92 N O N 93 N C N 94 R C N 95 N O N 96 S C N 97 N O N 98 N C N 99 R C N 100 N N N 101 N C N 102 N O N 103 N N N 104 N C N 105 N N N 106 N C N 107 N C N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N O N 123 N P N 124 N O N 125 N O N 126 N O N 127 N C N 128 R C N 129 N O N 130 S C N 131 N O N 132 N C N 133 R C Y 134 N N Y 135 N C Y 136 N N Y 137 N C N 138 N C N 139 N O N 140 N N N 141 N C N 142 N N N 143 N N Y 144 N C N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N O N 160 N P N 161 N O N 162 N O N 163 N O N 164 N C N 165 R C N 166 N O N 167 S C N 168 N O N 169 N C N 170 R C N 171 N N N 172 N C N 173 N O N 174 N N N 175 N C N 176 N O N 177 N C N 178 N C N 179 N C N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N N N 196 S C N 197 N C N 198 N O N 199 N C N 200 N C N 201 N C N 202 N O N 203 N N N 204 N O N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N N N 216 S C N 217 N C N 218 N O N 219 N C N 220 N C N 221 N C N 222 N O N 223 N O N 224 N O N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N O N 235 N H N 236 N H N 237 N N N 238 S C N 239 N C N 240 N O N 241 S C N 242 N C N 243 N C N 244 N C N 245 N O N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N N N 260 S C N 261 N C N 262 N O N 263 N C N 264 N C N 265 N C N 266 N C N 267 N O N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N N N 282 S C N 283 N C N 284 N O N 285 N C N 286 N C N 287 N C N 288 N C N 289 N N N 290 N O N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N N N 307 S C N 308 N C N 309 N O N 310 N C N 311 N C N 312 N S N 313 N C N 314 N O N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N N N 327 S C N 328 N C N 329 N O N 330 N C Y 331 N C Y 332 N C Y 333 N C Y 334 N C Y 335 N C Y 336 N C N 337 N O N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N N N 350 S C N 351 N C N 352 N O N 353 N C N 354 N C N 355 N C N 356 N O N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N N N 367 S C N 368 N C N 369 N O N 370 N C N 371 N O N 372 N O N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N N N 381 S C N 382 N C N 383 N O N 384 R C N 385 N O N 386 N C N 387 N O N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N N N 398 S C N 399 N C N 400 N O N 401 N C Y 402 N C Y 403 N C Y 404 N C Y 405 N N Y 406 N C Y 407 N C Y 408 N C Y 409 N C Y 410 N C N 411 N O N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N N N 425 S C N 426 N C N 427 N O N 428 N C Y 429 N C Y 430 N C Y 431 N C Y 432 N C Y 433 N C Y 434 N C N 435 N O N 436 N O N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N N N 449 S C N 450 N C N 451 N O N 452 N C N 453 N C N 454 N C N 455 N O N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N H N 465 N H N 466 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N doub N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N doub N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N doub N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing Y 141 N sing Y 142 N sing Y 143 N doub N 144 N sing Y 145 N sing N 146 N sing Y 147 N doub N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N doub N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N doub N 183 N sing N 184 N sing N 185 N sing N 186 N doub N 187 N sing N 188 N sing N 189 N doub N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N doub N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N doub N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N doub N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N doub N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N doub N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N doub N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N doub N 325 N sing N 326 N sing N 327 N sing N 328 N sing Y 329 N doub Y 330 N sing Y 331 N sing N 332 N sing Y 333 N doub N 334 N sing Y 335 N doub N 336 N sing Y 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N doub N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N doub N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N doub N 394 N sing N 395 N sing N 396 N sing N 397 N sing Y 398 N doub Y 399 N sing Y 400 N sing N 401 N sing Y 402 N doub Y 403 N sing Y 404 N sing N 405 N sing Y 406 N sing Y 407 N doub N 408 N sing Y 409 N doub N 410 N sing Y 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N doub N 422 N sing N 423 N sing N 424 N sing N 425 N sing Y 426 N doub Y 427 N sing Y 428 N sing N 429 N sing Y 430 N doub N 431 N sing Y 432 N doub N 433 N sing Y 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N doub N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing US Proc.Natl.Acad.Sci.USA PNASA6 0040 0027-8424 101 14367 14372 10.1073/pnas.0405586101 15448208 A poxvirus protein forms a complex with left-handed Z-DNA: crystal structure of a Yatapoxvirus Zalpha bound to DNA. 2004 10.2210/pdb1sfu/pdb pdb_00001sfu 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 CCD 2002-11-26 MARRESEARCH MAD M x-ray 1 0.9201 1.0 0.9203 1.0 0.9159 1.0 BL41XU SPring-8 0.9201 0.9203, 0.9159 SYNCHROTRON SPRING-8 BEAMLINE BL41XU 2114.398 5'-D(*T*CP*GP*CP*GP*CP*G)-3' 2 syn polymer 8722.137 34L protein N-terminal Zalpha domain 2 man polymer 18.015 water 170 nat water no no (DT)(DC)(DG)(DC)(DG)(DC)(DG) TCGCGCG C,D polydeoxyribonucleotide no no MDLLSCTVNDAEIFSLVKKEVLSLNTNDYTTAISLSNRLKINKKKINQQLYKLQKEDTVKMVPSNPPKWFKNYNC MDLLSCTVNDAEIFSLVKKEVLSLNTNDYTTAISLSNRLKINKKKINQQLYKLQKEDTVKMVPSNPPKWFKNYNC A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Yatapoxvirus Escherichia Escherichia coli sample 132475 Yaba-like disease virus 469008 Escherichia coli BL21(DE3) BL21(DE3) Plasmid pET28a 1 2.95 58.03 VAPOR DIFFUSION, HANGING DROP 6.0 1-1.1 M lithium sulfate, 2-4 mM magnesium chloride, 25 mM cacodylate, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K 295 lithium sulfate 1 magnesium chloride 1 cacodylate 1 H2O 1 lithium sulfate 2 magnesium chloride 2 H2O 2 3.886 1 19 C 1 D 6 1.788 C_DC1:DG6_D 1 0.008 -0.189 0.085 -0.157 -2.597 1 19 C 2 D 5 3.334 C_DG2:DC5_D 2 -3.648 0.361 0.056 -0.160 2.975 1 19 C 3 D 4 1.761 C_DC3:DG4_D 3 0.926 -0.278 0.263 -0.121 -0.492 1 19 C 4 D 3 1.909 C_DG4:DC3_D 4 5.051 0.402 0.092 -0.114 -2.166 1 19 C 5 D 2 1.760 C_DC5:DG2_D 5 1.063 -0.232 0.241 -0.056 3.287 1 19 C 6 D 1 4.999 C_DG6:DC1_D 6 9.146 0.194 0.071 -0.149 3.274 -5.695 C C 1 2 -2.294 D D 6 5 3.778 0.222 0.027 5.402 CC_DC1DG2:DC5DG6_DD 1 2.151 22.204 -5.268 -55.808 14.187 3.315 -49.376 C C 2 3 4.953 D D 5 4 3.421 -4.131 0.238 -1.320 CC_DG2DC3:DG4DC5_DD 2 -3.274 -3.926 -49.111 1.898 0.033 3.599 -9.674 C C 3 4 4.355 D D 4 3 3.586 -0.711 0.076 5.283 CC_DC3DG4:DC3DG4_DD 3 4.069 24.927 -8.749 -29.687 9.842 3.227 -51.960 C C 4 5 8.906 D D 3 2 3.431 -7.775 -0.146 -1.162 CC_DG4DC5:DG2DC3_DD 4 -2.143 -2.455 -51.373 1.859 -0.313 2.223 -10.351 C C 5 6 -10.306 D D 2 1 3.365 1.833 0.265 5.316 CC_DC5DG6:DC1DG2_DD 5 2.366 13.305 -9.910 -32.260 5.080 chem_comp_atom chem_comp_bond database_2 repository Initial release Version format compliance Version format compliance Data collection Database references 1 0 2004-08-17 1 1 2008-04-29 1 2 2011-07-13 1 3 2024-02-14 _database_2.pdbx_DOI _database_2.pdbx_database_accession RCSB Y RCSB 2004-02-20 REL REL HOH water HOH 10 3 HOH HOH 10 C HOH 11 3 HOH HOH 11 C HOH 20 3 HOH HOH 20 C HOH 35 3 HOH HOH 35 C HOH 46 3 HOH HOH 46 C HOH 54 3 HOH HOH 54 C HOH 58 3 HOH HOH 58 C HOH 61 3 HOH HOH 61 C HOH 69 3 HOH HOH 69 C HOH 80 3 HOH HOH 80 C HOH 90 3 HOH HOH 90 C HOH 96 3 HOH HOH 96 C HOH 99 3 HOH HOH 99 C HOH 101 3 HOH HOH 101 C HOH 102 3 HOH HOH 102 C HOH 103 3 HOH HOH 103 C HOH 108 3 HOH HOH 108 C HOH 126 3 HOH HOH 126 C HOH 141 3 HOH HOH 141 C HOH 149 3 HOH HOH 149 C HOH 164 3 HOH HOH 164 C HOH 167 3 HOH HOH 167 C HOH 7 3 HOH HOH 7 D HOH 9 3 HOH HOH 9 D HOH 13 3 HOH HOH 13 D HOH 15 3 HOH HOH 15 D HOH 16 3 HOH HOH 16 D HOH 19 3 HOH HOH 19 D HOH 21 3 HOH HOH 21 D HOH 22 3 HOH HOH 22 D HOH 31 3 HOH HOH 31 D HOH 41 3 HOH HOH 41 D HOH 42 3 HOH HOH 42 D HOH 43 3 HOH HOH 43 D HOH 47 3 HOH HOH 47 D HOH 49 3 HOH HOH 49 D HOH 51 3 HOH HOH 51 D HOH 53 3 HOH HOH 53 D HOH 55 3 HOH HOH 55 D HOH 74 3 HOH HOH 74 D HOH 75 3 HOH HOH 75 D HOH 79 3 HOH HOH 79 D HOH 82 3 HOH HOH 82 D HOH 86 3 HOH HOH 86 D HOH 104 3 HOH HOH 104 D HOH 109 3 HOH HOH 109 D HOH 113 3 HOH HOH 113 D HOH 116 3 HOH HOH 116 D HOH 119 3 HOH HOH 119 D HOH 124 3 HOH HOH 124 D HOH 127 3 HOH HOH 127 D HOH 130 3 HOH HOH 130 D HOH 135 3 HOH HOH 135 D HOH 136 3 HOH HOH 136 D HOH 158 3 HOH HOH 158 D HOH 163 3 HOH HOH 163 D HOH 1 3 HOH HOH 76 A HOH 5 3 HOH HOH 77 A HOH 8 3 HOH HOH 78 A HOH 12 3 HOH HOH 79 A HOH 14 3 HOH HOH 80 A HOH 17 3 HOH HOH 81 A HOH 18 3 HOH HOH 82 A HOH 28 3 HOH HOH 83 A HOH 38 3 HOH HOH 84 A HOH 48 3 HOH HOH 85 A HOH 56 3 HOH HOH 86 A HOH 60 3 HOH HOH 87 A HOH 62 3 HOH HOH 88 A HOH 65 3 HOH HOH 89 A HOH 67 3 HOH HOH 90 A HOH 68 3 HOH HOH 91 A HOH 73 3 HOH HOH 92 A HOH 76 3 HOH HOH 93 A HOH 84 3 HOH HOH 94 A HOH 93 3 HOH HOH 95 A HOH 94 3 HOH HOH 96 A HOH 95 3 HOH HOH 97 A HOH 98 3 HOH HOH 98 A HOH 105 3 HOH HOH 99 A HOH 107 3 HOH HOH 100 A HOH 110 3 HOH HOH 101 A HOH 111 3 HOH HOH 102 A HOH 115 3 HOH HOH 103 A HOH 121 3 HOH HOH 104 A HOH 123 3 HOH HOH 105 A HOH 138 3 HOH HOH 106 A HOH 139 3 HOH HOH 107 A HOH 143 3 HOH HOH 108 A HOH 144 3 HOH HOH 109 A HOH 148 3 HOH HOH 110 A HOH 153 3 HOH HOH 111 A HOH 154 3 HOH HOH 112 A HOH 157 3 HOH HOH 113 A HOH 161 3 HOH HOH 114 A HOH 162 3 HOH HOH 115 A HOH 169 3 HOH HOH 116 A HOH 170 3 HOH HOH 117 A HOH 171 3 HOH HOH 118 A HOH 2 3 HOH HOH 76 B HOH 3 3 HOH HOH 77 B HOH 4 3 HOH HOH 78 B HOH 6 3 HOH HOH 79 B HOH 23 3 HOH HOH 80 B HOH 24 3 HOH HOH 81 B HOH 25 3 HOH HOH 82 B HOH 26 3 HOH HOH 83 B HOH 27 3 HOH HOH 84 B HOH 29 3 HOH HOH 85 B HOH 30 3 HOH HOH 86 B HOH 32 3 HOH HOH 87 B HOH 33 3 HOH HOH 88 B HOH 34 3 HOH HOH 89 B HOH 36 3 HOH HOH 90 B HOH 37 3 HOH HOH 91 B HOH 39 3 HOH HOH 92 B HOH 40 3 HOH HOH 93 B HOH 44 3 HOH HOH 94 B HOH 45 3 HOH HOH 95 B HOH 50 3 HOH HOH 96 B HOH 52 3 HOH HOH 97 B HOH 57 3 HOH HOH 98 B HOH 59 3 HOH HOH 99 B HOH 63 3 HOH HOH 100 B HOH 64 3 HOH HOH 101 B HOH 66 3 HOH HOH 102 B HOH 70 3 HOH HOH 103 B HOH 71 3 HOH HOH 104 B HOH 72 3 HOH HOH 105 B HOH 77 3 HOH HOH 106 B HOH 78 3 HOH HOH 107 B HOH 81 3 HOH HOH 108 B HOH 83 3 HOH HOH 109 B HOH 85 3 HOH HOH 110 B HOH 87 3 HOH HOH 111 B HOH 88 3 HOH HOH 112 B HOH 89 3 HOH HOH 113 B HOH 91 3 HOH HOH 114 B HOH 92 3 HOH HOH 115 B HOH 97 3 HOH HOH 116 B HOH 100 3 HOH HOH 117 B HOH 106 3 HOH HOH 118 B HOH 112 3 HOH HOH 119 B HOH 114 3 HOH HOH 120 B HOH 117 3 HOH HOH 121 B HOH 118 3 HOH HOH 122 B HOH 120 3 HOH HOH 123 B HOH 122 3 HOH HOH 124 B HOH 125 3 HOH HOH 125 B HOH 128 3 HOH HOH 126 B HOH 129 3 HOH HOH 127 B HOH 131 3 HOH HOH 128 B HOH 132 3 HOH HOH 129 B HOH 133 3 HOH HOH 130 B HOH 134 3 HOH HOH 131 B HOH 137 3 HOH HOH 132 B HOH 140 3 HOH HOH 133 B HOH 142 3 HOH HOH 134 B HOH 145 3 HOH HOH 135 B HOH 146 3 HOH HOH 136 B HOH 147 3 HOH HOH 137 B HOH 150 3 HOH HOH 138 B HOH 151 3 HOH HOH 139 B HOH 152 3 HOH HOH 140 B HOH 155 3 HOH HOH 141 B HOH 156 3 HOH HOH 142 B HOH 159 3 HOH HOH 143 B HOH 160 3 HOH HOH 144 B HOH 165 3 HOH HOH 145 B HOH 166 3 HOH HOH 146 B n 1 0 C C 1 n 2 DC 1 C G 2 n 3 DG 2 C C 3 n 4 DC 3 C G 4 n 5 DG 4 C C 5 n 6 DC 5 C G 6 n 7 DG 6 C n 1 0 D C 1 n 2 DC 1 D G 2 n 3 DG 2 D C 3 n 4 DC 3 D G 4 n 5 DG 4 D C 5 n 6 DC 5 D G 6 n 7 DG 6 D n 1 1 A n 2 2 A n 3 3 A n 4 4 A n 5 5 A CYS 6 n 6 CYS 6 A THR 7 n 7 THR 7 A VAL 8 n 8 VAL 8 A ASN 9 n 9 ASN 9 A ASP 10 n 10 ASP 10 A ALA 11 n 11 ALA 11 A GLU 12 n 12 GLU 12 A ILE 13 n 13 ILE 13 A PHE 14 n 14 PHE 14 A SER 15 n 15 SER 15 A LEU 16 n 16 LEU 16 A VAL 17 n 17 VAL 17 A LYS 18 n 18 LYS 18 A LYS 19 n 19 LYS 19 A GLU 20 n 20 GLU 20 A VAL 21 n 21 VAL 21 A LEU 22 n 22 LEU 22 A SER 23 n 23 SER 23 A LEU 24 n 24 LEU 24 A ASN 25 n 25 ASN 25 A THR 26 n 26 THR 26 A ASN 27 n 27 ASN 27 A ASP 28 n 28 ASP 28 A TYR 29 n 29 TYR 29 A THR 30 n 30 THR 30 A THR 31 n 31 THR 31 A ALA 32 n 32 ALA 32 A ILE 33 n 33 ILE 33 A SER 34 n 34 SER 34 A LEU 35 n 35 LEU 35 A SER 36 n 36 SER 36 A ASN 37 n 37 ASN 37 A ARG 38 n 38 ARG 38 A LEU 39 n 39 LEU 39 A LYS 40 n 40 LYS 40 A ILE 41 n 41 ILE 41 A ASN 42 n 42 ASN 42 A LYS 43 n 43 LYS 43 A LYS 44 n 44 LYS 44 A LYS 45 n 45 LYS 45 A ILE 46 n 46 ILE 46 A ASN 47 n 47 ASN 47 A GLN 48 n 48 GLN 48 A GLN 49 n 49 GLN 49 A LEU 50 n 50 LEU 50 A TYR 51 n 51 TYR 51 A LYS 52 n 52 LYS 52 A LEU 53 n 53 LEU 53 A GLN 54 n 54 GLN 54 A LYS 55 n 55 LYS 55 A GLU 56 n 56 GLU 56 A ASP 57 n 57 ASP 57 A THR 58 n 58 THR 58 A VAL 59 n 59 VAL 59 A LYS 60 n 60 LYS 60 A MET 61 n 61 MET 61 A VAL 62 n 62 VAL 62 A PRO 63 n 63 PRO 63 A SER 64 n 64 SER 64 A ASN 65 n 65 ASN 65 A PRO 66 n 66 PRO 66 A PRO 67 n 67 PRO 67 A LYS 68 n 68 LYS 68 A TRP 69 n 69 TRP 69 A PHE 70 n 70 PHE 70 A LYS 71 n 71 LYS 71 A ASN 72 n 72 ASN 72 A TYR 73 n 73 TYR 73 A ASN 74 n 74 ASN 74 A CYS 75 n 75 CYS 75 A n 1 1 B n 2 2 B n 3 3 B n 4 4 B n 5 5 B CYS 6 n 6 CYS 6 B THR 7 n 7 THR 7 B VAL 8 n 8 VAL 8 B ASN 9 n 9 ASN 9 B ASP 10 n 10 ASP 10 B ALA 11 n 11 ALA 11 B GLU 12 n 12 GLU 12 B ILE 13 n 13 ILE 13 B PHE 14 n 14 PHE 14 B SER 15 n 15 SER 15 B LEU 16 n 16 LEU 16 B VAL 17 n 17 VAL 17 B LYS 18 n 18 LYS 18 B LYS 19 n 19 LYS 19 B GLU 20 n 20 GLU 20 B VAL 21 n 21 VAL 21 B LEU 22 n 22 LEU 22 B SER 23 n 23 SER 23 B LEU 24 n 24 LEU 24 B ASN 25 n 25 ASN 25 B THR 26 n 26 THR 26 B ASN 27 n 27 ASN 27 B ASP 28 n 28 ASP 28 B TYR 29 n 29 TYR 29 B THR 30 n 30 THR 30 B THR 31 n 31 THR 31 B ALA 32 n 32 ALA 32 B ILE 33 n 33 ILE 33 B SER 34 n 34 SER 34 B LEU 35 n 35 LEU 35 B SER 36 n 36 SER 36 B ASN 37 n 37 ASN 37 B ARG 38 n 38 ARG 38 B LEU 39 n 39 LEU 39 B GLY 40 n 40 LYS 40 B ILE 41 n 41 ILE 41 B ASN 42 n 42 ASN 42 B LYS 43 n 43 LYS 43 B LYS 44 n 44 LYS 44 B LYS 45 n 45 LYS 45 B ILE 46 n 46 ILE 46 B ASN 47 n 47 ASN 47 B GLN 48 n 48 GLN 48 B GLN 49 n 49 GLN 49 B LEU 50 n 50 LEU 50 B TYR 51 n 51 TYR 51 B LYS 52 n 52 LYS 52 B LEU 53 n 53 LEU 53 B GLN 54 n 54 GLN 54 B LYS 55 n 55 LYS 55 B GLU 56 n 56 GLU 56 B ASP 57 n 57 ASP 57 B THR 58 n 58 THR 58 B VAL 59 n 59 VAL 59 B LYS 60 n 60 LYS 60 B MET 61 n 61 MET 61 B VAL 62 n 62 VAL 62 B PRO 63 n 63 PRO 63 B SER 64 n 64 SER 64 B ASN 65 n 65 ASN 65 B PRO 66 n 66 PRO 66 B PRO 67 n 67 PRO 67 B LYS 68 n 68 LYS 68 B TRP 69 n 69 TRP 69 B PHE 70 n 70 PHE 70 B LYS 71 n 71 LYS 71 B ASN 72 n 72 ASN 72 B TYR 73 n 73 TYR 73 B ASN 74 n 74 ASN 74 B CYS 75 n 75 CYS 75 B author_defined_assembly 4 tetrameric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N LYS 60 C N LYS 60 A O PHE 70 C O PHE 70 B N THR 30 D N THR 30 B O TRP 69 D O TRP 69 B O PHE 70 D O PHE 70 B N LYS 60 D N LYS 60 1 C P DC 1 A P DC 2 1 Y 1 C OP1 DC 1 A OP1 DC 2 1 Y 1 C OP2 DC 1 A OP2 DC 2 1 Y 1 D P DC 1 B P DC 2 1 Y 1 D OP1 DC 1 B OP1 DC 2 1 Y 1 D OP2 DC 1 B OP2 DC 2 1 Y 1 A OG1 THR 7 C OG1 THR 7 1 Y 1 A CG2 THR 7 C CG2 THR 7 1 Y 1 A CG1 VAL 8 C CG1 VAL 8 1 Y 1 A CG2 VAL 8 C CG2 VAL 8 1 Y 1 A CG ASN 9 C CG ASN 9 1 Y 1 A OD1 ASN 9 C OD1 ASN 9 1 Y 1 A ND2 ASN 9 C ND2 ASN 9 1 Y 1 B CB LYS 40 D CB LYS 40 1 Y 1 B CG LYS 40 D CG LYS 40 1 Y 1 B CD LYS 40 D CD LYS 40 1 Y 1 B CE LYS 40 D CE LYS 40 1 Y 1 B NZ LYS 40 D NZ LYS 40 1 Y 1 C DT 0 A DT 1 1 Y 1 D DT 0 B DT 1 1 Y 1 A MET 1 C MET 1 1 Y 1 A ASP 2 C ASP 2 1 Y 1 A LEU 3 C LEU 3 1 Y 1 A LEU 4 C LEU 4 1 Y 1 A SER 5 C SER 5 1 Y 1 B MET 1 D MET 1 1 Y 1 B ASP 2 D ASP 2 1 Y 1 B LEU 3 D LEU 3 1 Y 1 B LEU 4 D LEU 4 1 Y 1 B SER 5 D SER 5 1 Y 1 A ASN 9 -54.98 -123.61 1 A PRO 63 -55.60 65.35 1 B THR 26 -29.56 -67.43 1 B SER 64 172.44 173.64 -1.017 0.000 0.000 5.277 0.000 -4.259 0.2704 0.2375 2.0 20.0 1539 15970 15266 9.6 95.6 random 1 0 MAD 2.0 20.0 170 1542 0 240 1132 0.0053 1.1844 2.0 50.0 1SFU 15772 1 2.0 2.07 99.8 data collection HKL-2000 data scaling SCALEPACK phasing SOLVE refinement CNS data reduction HKL-2000 Crystal structure of the viral Zalpha domain bound to left-handed Z-DNA 1 N N 1 N N 2 N N 2 N N 3 N N 3 N N 3 N N 3 N N A ALA 11 C ALA 11 HELX_P A SER 23 C SER 23 1 1 13 A THR 31 C THR 31 HELX_P A LEU 39 C LEU 39 1 2 9 A ASN 42 C ASN 42 HELX_P A GLU 56 C GLU 56 1 3 15 B ALA 11 D ALA 11 HELX_P B SER 23 D SER 23 1 4 13 B THR 31 D THR 31 HELX_P B LEU 39 D LEU 39 1 5 9 B ASN 42 D ASN 42 HELX_P B GLU 56 D GLU 56 1 6 15 hydrog WATSON-CRICK C DC 1 A N3 DC 2 1_555 D DG 6 B N1 DG 7 1_555 hydrog WATSON-CRICK C DC 1 A N4 DC 2 1_555 D DG 6 B O6 DG 7 1_555 hydrog WATSON-CRICK C DC 1 A O2 DC 2 1_555 D DG 6 B N2 DG 7 1_555 hydrog WATSON-CRICK C DG 2 A N1 DG 3 1_555 D DC 5 B N3 DC 6 1_555 hydrog WATSON-CRICK C DG 2 A N2 DG 3 1_555 D DC 5 B O2 DC 6 1_555 hydrog WATSON-CRICK C DG 2 A O6 DG 3 1_555 D DC 5 B N4 DC 6 1_555 hydrog WATSON-CRICK C DC 3 A N3 DC 4 1_555 D DG 4 B N1 DG 5 1_555 hydrog WATSON-CRICK C DC 3 A N4 DC 4 1_555 D DG 4 B O6 DG 5 1_555 hydrog WATSON-CRICK C DC 3 A O2 DC 4 1_555 D DG 4 B N2 DG 5 1_555 hydrog WATSON-CRICK C DG 4 A N1 DG 5 1_555 D DC 3 B N3 DC 4 1_555 hydrog WATSON-CRICK C DG 4 A N2 DG 5 1_555 D DC 3 B O2 DC 4 1_555 hydrog WATSON-CRICK C DG 4 A O6 DG 5 1_555 D DC 3 B N4 DC 4 1_555 hydrog WATSON-CRICK C DC 5 A N3 DC 6 1_555 D DG 2 B N1 DG 3 1_555 hydrog WATSON-CRICK C DC 5 A N4 DC 6 1_555 D DG 2 B O6 DG 3 1_555 hydrog WATSON-CRICK C DC 5 A O2 DC 6 1_555 D DG 2 B N2 DG 3 1_555 hydrog WATSON-CRICK C DG 6 A N1 DG 7 1_555 D DC 1 B N3 DC 2 1_555 hydrog WATSON-CRICK C DG 6 A N2 DG 7 1_555 D DC 1 B O2 DC 2 1_555 hydrog WATSON-CRICK C DG 6 A O6 DG 7 1_555 D DC 1 B N4 DC 2 1_555 DNA Binding Protein/DNA Protein-Z-DNA complex, DNA Binding Protein-DNA COMPLEX A ASN 65 C ASN 65 1 A PRO 66 C PRO 66 0.04 B ASN 65 D ASN 65 1 B PRO 66 D PRO 66 -0.11 Q9DHS8_YLDV UNP 2 1 Q9DHS8 MDLLSCTVNDAEIFSLVKKEVLSLNTNDYTTAISLSNRLKINKKKINQQLYKLQKEDTVKMVPSNPPKWFKNYNC 1SFU PDB 1 1SFU 1 75 1SFU 1 75 Q9DHS8 A 1 1 75 1 75 1SFU 1 75 Q9DHS8 B 1 1 75 0 6 1SFU 0 6 1SFU C 2 1 7 0 6 1SFU 0 6 1SFU D 2 1 7 2 3 anti-parallel anti-parallel anti-parallel A VAL 59 C VAL 59 A VAL 62 C VAL 62 A LYS 68 C LYS 68 A LYS 71 C LYS 71 B TYR 29 D TYR 29 B THR 30 D THR 30 B LYS 68 D LYS 68 B LYS 71 D LYS 71 B VAL 59 D VAL 59 B VAL 62 D VAL 62 18 P 21 21 2