0.021076
0.000000
0.000000
0.000000
0.019366
0.000000
0.000000
0.000000
0.018332
0.00000
0.00000
0.00000
Nielsen, M.S.
Harris, P.
Christensen, H.E.M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
47.447
51.637
54.549
Co 3
58.933
COBALT (III) ION
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
Fe3 S4
295.795
FE3-S4 CLUSTER
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
CO
N
2
N
N
N
3
S
C
N
4
N
C
N
5
N
O
N
6
N
C
N
7
N
O
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
H
N
15
N
N
N
16
S
C
N
17
N
C
N
18
N
O
N
19
N
C
N
20
N
C
N
21
N
O
N
22
N
N
N
23
N
O
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
N
N
33
S
C
N
34
N
C
N
35
N
O
N
36
N
C
N
37
N
C
N
38
N
O
N
39
N
O
N
40
N
O
N
41
N
H
N
42
N
H
N
43
N
H
N
44
N
H
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
N
N
49
R
C
N
50
N
C
N
51
N
O
N
52
N
C
N
53
N
S
N
54
N
O
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
FE
N
63
N
FE
N
64
N
FE
N
65
N
S
N
66
N
S
N
67
N
S
N
68
N
S
N
69
N
N
N
70
S
C
N
71
N
C
N
72
N
O
N
73
N
C
N
74
N
C
N
75
N
C
N
76
N
O
N
77
N
N
N
78
N
O
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
N
N
90
S
C
N
91
N
C
N
92
N
O
N
93
N
C
N
94
N
C
N
95
N
C
N
96
N
O
N
97
N
O
N
98
N
O
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
N
C
N
110
N
C
N
111
N
O
N
112
N
O
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
O
N
119
N
H
N
120
N
H
N
121
N
N
N
122
S
C
N
123
N
C
N
124
N
O
N
125
S
C
N
126
N
C
N
127
N
C
N
128
N
C
N
129
N
O
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
N
N
144
S
C
N
145
N
C
N
146
N
O
N
147
N
C
N
148
N
C
N
149
N
C
N
150
N
C
N
151
N
O
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
N
N
166
S
C
N
167
N
C
N
168
N
O
N
169
N
C
N
170
N
C
N
171
N
C
N
172
N
C
N
173
N
N
N
174
N
O
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
N
N
191
S
C
N
192
N
C
N
193
N
O
N
194
N
C
N
195
N
C
N
196
N
S
N
197
N
C
N
198
N
O
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
N
N
211
S
C
N
212
N
C
N
213
N
O
N
214
N
C
Y
215
N
C
Y
216
N
C
Y
217
N
C
Y
218
N
C
Y
219
N
C
Y
220
N
C
N
221
N
O
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
N
N
234
S
C
N
235
N
C
N
236
N
O
N
237
N
C
N
238
N
C
N
239
N
C
N
240
N
O
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
N
255
N
O
N
256
N
O
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
N
N
265
S
C
N
266
N
C
N
267
N
O
N
268
R
C
N
269
N
O
N
270
N
C
N
271
N
O
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
N
N
282
S
C
N
283
N
C
N
284
N
O
N
285
N
C
Y
286
N
C
Y
287
N
C
Y
288
N
C
Y
289
N
N
Y
290
N
C
Y
291
N
C
Y
292
N
C
Y
293
N
C
Y
294
N
C
N
295
N
O
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
N
N
309
S
C
N
310
N
C
N
311
N
O
N
312
N
C
Y
313
N
C
Y
314
N
C
Y
315
N
C
Y
316
N
C
Y
317
N
C
Y
318
N
C
N
319
N
O
N
320
N
O
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
N
N
333
S
C
N
334
N
C
N
335
N
O
N
336
N
C
N
337
N
C
N
338
N
C
N
339
N
O
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
doub
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
doub
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
doub
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
doub
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
doub
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
doub
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
doub
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
doub
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
doub
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
doub
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
doub
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
Y
210
N
doub
Y
211
N
sing
Y
212
N
sing
N
213
N
sing
Y
214
N
doub
N
215
N
sing
Y
216
N
doub
N
217
N
sing
Y
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
doub
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
doub
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
doub
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
doub
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
Y
279
N
doub
Y
280
N
sing
Y
281
N
sing
N
282
N
sing
Y
283
N
doub
Y
284
N
sing
Y
285
N
sing
N
286
N
sing
Y
287
N
sing
Y
288
N
doub
N
289
N
sing
Y
290
N
doub
N
291
N
sing
Y
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
doub
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
Y
307
N
doub
Y
308
N
sing
Y
309
N
sing
N
310
N
sing
Y
311
N
doub
N
312
N
sing
Y
313
N
doub
N
314
N
sing
Y
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
doub
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
43
5188
5194
10.1021/bi049942x
15122884
The 1.5 A Resolution Crystal Structure of [Fe3S4]-Ferredoxin from the Hyperthermophilic Archaeon Pyrococcus furiosus
2004
10.2210/pdb1siz/pdb
pdb_00001siz
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2003-04-17
ADSC QUANTUM 4
Silicium
SINGLE WAVELENGTH
M
x-ray
1
0.9999
1.0
ID29
ESRF
0.9999
SYNCHROTRON
ESRF BEAMLINE ID29
7171.001
Ferredoxin
2
man
polymer
58.933
COBALT (III) ION
4
syn
non-polymer
295.795
FE3-S4 CLUSTER
2
syn
non-polymer
18.015
water
46
nat
water
no
no
AWKVSVDQDTCIGDAICASLCPDVFEMNDEGKAQPKVEVIEDEELYNCAKEAMEACPVSAITIEEA
AWKVSVDQDTCIGDAICASLCPDVFEMNDEGKAQPKVEVIEDEELYNCAKEAMEACPVSAITIEEA
A,C
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Pyrococcus
Escherichia
sample
FDXA, PF1909
2261
Pyrococcus furiosus
562
Escherichia coli
plasmid
pET3a
1
2.33
47.18
VAPOR DIFFUSION, HANGING DROP
7.0
PEG 400, hexammine cobalt(III)-ions, HEPES, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
277
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Refinement description
1
0
2004-05-25
1
1
2008-04-29
1
2
2011-07-13
1
3
2023-08-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
The 1.5 A Resolution Crystal Structure of [Fe3S4]-Ferredoxin from the hyperthermophilic Archaeon Pyrococcus furiosus
RCSB
Y
RCSB
2004-03-02
REL
3CO
COBALT (III) ION
F3S
FE3-S4 CLUSTER
HOH
water
1VJW
pdb entry 1VJW
PDB
experimental model
3CO
72
2
3CO
3CO
72
A
3CO
74
2
3CO
3CO
74
A
F3S
70
3
F3S
F3S
70
A
3CO
73
2
3CO
3CO
73
C
3CO
75
2
3CO
3CO
75
C
F3S
71
3
F3S
F3S
71
C
HOH
1
4
HOH
HOH
75
A
HOH
3
4
HOH
HOH
76
A
HOH
4
4
HOH
HOH
77
A
HOH
9
4
HOH
HOH
78
A
HOH
10
4
HOH
HOH
79
A
HOH
11
4
HOH
HOH
80
A
HOH
12
4
HOH
HOH
81
A
HOH
16
4
HOH
HOH
82
A
HOH
18
4
HOH
HOH
83
A
HOH
19
4
HOH
HOH
84
A
HOH
20
4
HOH
HOH
85
A
HOH
21
4
HOH
HOH
86
A
HOH
22
4
HOH
HOH
87
A
HOH
23
4
HOH
HOH
88
A
HOH
24
4
HOH
HOH
89
A
HOH
25
4
HOH
HOH
90
A
HOH
27
4
HOH
HOH
91
A
HOH
28
4
HOH
HOH
92
A
HOH
30
4
HOH
HOH
93
A
HOH
31
4
HOH
HOH
94
A
HOH
32
4
HOH
HOH
95
A
HOH
34
4
HOH
HOH
96
A
HOH
36
4
HOH
HOH
97
A
HOH
37
4
HOH
HOH
98
A
HOH
41
4
HOH
HOH
99
A
HOH
43
4
HOH
HOH
100
A
HOH
45
4
HOH
HOH
101
A
HOH
47
4
HOH
HOH
102
A
HOH
48
4
HOH
HOH
103
A
HOH
49
4
HOH
HOH
104
A
HOH
50
4
HOH
HOH
105
A
HOH
2
4
HOH
HOH
76
C
HOH
6
4
HOH
HOH
77
C
HOH
13
4
HOH
HOH
78
C
HOH
15
4
HOH
HOH
79
C
HOH
17
4
HOH
HOH
80
C
HOH
26
4
HOH
HOH
81
C
HOH
29
4
HOH
HOH
82
C
HOH
33
4
HOH
HOH
83
C
HOH
35
4
HOH
HOH
84
C
HOH
38
4
HOH
HOH
85
C
HOH
39
4
HOH
HOH
86
C
HOH
40
4
HOH
HOH
87
C
HOH
42
4
HOH
HOH
88
C
HOH
44
4
HOH
HOH
89
C
HOH
46
4
HOH
HOH
90
C
ALA
1
n
1
ALA
1
A
TRP
2
n
2
TRP
2
A
LYS
3
n
3
LYS
3
A
VAL
4
n
4
VAL
4
A
SER
5
n
5
SER
5
A
VAL
6
n
6
VAL
6
A
ASP
7
n
7
ASP
7
A
GLN
8
n
8
GLN
8
A
ASP
9
n
9
ASP
9
A
THR
10
n
10
THR
10
A
CYS
11
n
11
CYS
11
A
ILE
12
n
12
ILE
12
A
GLY
13
n
13
GLY
13
A
ASP
14
n
14
ASP
14
A
ALA
15
n
15
ALA
15
A
ILE
16
n
16
ILE
16
A
CYS
17
n
17
CYS
17
A
ALA
18
n
18
ALA
18
A
SER
19
n
19
SER
19
A
LEU
20
n
20
LEU
20
A
CYS
21
n
21
CYS
21
A
PRO
22
n
22
PRO
22
A
ASP
23
n
23
ASP
23
A
VAL
24
n
24
VAL
24
A
PHE
25
n
25
PHE
25
A
GLU
26
n
26
GLU
26
A
MET
27
n
27
MET
27
A
ASN
28
n
28
ASN
28
A
ASP
29
n
29
ASP
29
A
GLU
30
n
30
GLU
30
A
GLY
31
n
31
GLY
31
A
LYS
32
n
32
LYS
32
A
ALA
33
n
33
ALA
33
A
GLN
34
n
34
GLN
34
A
PRO
35
n
35
PRO
35
A
LYS
36
n
36
LYS
36
A
VAL
37
n
37
VAL
37
A
GLU
38
n
38
GLU
38
A
VAL
39
n
39
VAL
39
A
ILE
40
n
40
ILE
40
A
GLU
41
n
41
GLU
41
A
ASP
42
n
42
ASP
42
A
GLU
43
n
43
GLU
43
A
GLU
44
n
44
GLU
44
A
LEU
45
n
45
LEU
45
A
TYR
46
n
46
TYR
46
A
ASN
47
n
47
ASN
47
A
CYS
48
n
48
CYS
48
A
ALA
49
n
49
ALA
49
A
LYS
50
n
50
LYS
50
A
GLU
51
n
51
GLU
51
A
ALA
52
n
52
ALA
52
A
MET
53
n
53
MET
53
A
GLU
54
n
54
GLU
54
A
ALA
55
n
55
ALA
55
A
CYS
56
n
56
CYS
56
A
PRO
57
n
57
PRO
57
A
VAL
58
n
58
VAL
58
A
SER
59
n
59
SER
59
A
ALA
60
n
60
ALA
60
A
ILE
61
n
61
ILE
61
A
THR
62
n
62
THR
62
A
ILE
63
n
63
ILE
63
A
GLU
64
n
64
GLU
64
A
GLU
65
n
65
GLU
65
A
ALA
66
n
66
ALA
66
A
ALA
1
n
1
ALA
1
C
TRP
2
n
2
TRP
2
C
LYS
3
n
3
LYS
3
C
VAL
4
n
4
VAL
4
C
SER
5
n
5
SER
5
C
VAL
6
n
6
VAL
6
C
ASP
7
n
7
ASP
7
C
GLN
8
n
8
GLN
8
C
ASP
9
n
9
ASP
9
C
THR
10
n
10
THR
10
C
CYS
11
n
11
CYS
11
C
ILE
12
n
12
ILE
12
C
GLY
13
n
13
GLY
13
C
ASP
14
n
14
ASP
14
C
ALA
15
n
15
ALA
15
C
ILE
16
n
16
ILE
16
C
CYS
17
n
17
CYS
17
C
ALA
18
n
18
ALA
18
C
SER
19
n
19
SER
19
C
LEU
20
n
20
LEU
20
C
CYS
21
n
21
CYS
21
C
PRO
22
n
22
PRO
22
C
ASP
23
n
23
ASP
23
C
VAL
24
n
24
VAL
24
C
PHE
25
n
25
PHE
25
C
GLU
26
n
26
GLU
26
C
MET
27
n
27
MET
27
C
ASN
28
n
28
ASN
28
C
ASP
29
n
29
ASP
29
C
GLU
30
n
30
GLU
30
C
GLY
31
n
31
GLY
31
C
LYS
32
n
32
LYS
32
C
ALA
33
n
33
ALA
33
C
GLN
34
n
34
GLN
34
C
PRO
35
n
35
PRO
35
C
LYS
36
n
36
LYS
36
C
VAL
37
n
37
VAL
37
C
GLU
38
n
38
GLU
38
C
VAL
39
n
39
VAL
39
C
ILE
40
n
40
ILE
40
C
GLU
41
n
41
GLU
41
C
ASP
42
n
42
ASP
42
C
GLU
43
n
43
GLU
43
C
GLU
44
n
44
GLU
44
C
LEU
45
n
45
LEU
45
C
TYR
46
n
46
TYR
46
C
ASN
47
n
47
ASN
47
C
CYS
48
n
48
CYS
48
C
ALA
49
n
49
ALA
49
C
LYS
50
n
50
LYS
50
C
GLU
51
n
51
GLU
51
C
ALA
52
n
52
ALA
52
C
MET
53
n
53
MET
53
C
GLU
54
n
54
GLU
54
C
ALA
55
n
55
ALA
55
C
CYS
56
n
56
CYS
56
C
PRO
57
n
57
PRO
57
C
VAL
58
n
58
VAL
58
C
SER
59
n
59
SER
59
C
ALA
60
n
60
ALA
60
C
ILE
61
n
61
ILE
61
C
THR
62
n
62
THR
62
C
ILE
63
n
63
ILE
63
C
GLU
64
n
64
GLU
64
C
GLU
65
n
65
GLU
65
C
ALA
66
n
66
ALA
66
C
author_defined_assembly
2
dimeric
A
CYS
11
A
SG
CYS
11
1_555
A
F3S
70
E
FE1
F3S
1_555
A
F3S
70
E
S1
F3S
1_555
103.1
A
CYS
11
A
SG
CYS
11
1_555
A
F3S
70
E
FE1
F3S
1_555
A
F3S
70
E
S2
F3S
1_555
111.8
A
F3S
70
E
S1
F3S
1_555
A
F3S
70
E
FE1
F3S
1_555
A
F3S
70
E
S2
F3S
1_555
108.5
A
CYS
11
A
SG
CYS
11
1_555
A
F3S
70
E
FE1
F3S
1_555
A
F3S
70
E
S3
F3S
1_555
123.4
A
F3S
70
E
S1
F3S
1_555
A
F3S
70
E
FE1
F3S
1_555
A
F3S
70
E
S3
F3S
1_555
104.6
A
F3S
70
E
S2
F3S
1_555
A
F3S
70
E
FE1
F3S
1_555
A
F3S
70
E
S3
F3S
1_555
104.6
A
CYS
17
A
SG
CYS
17
1_555
A
F3S
70
E
FE3
F3S
1_555
A
F3S
70
E
S1
F3S
1_555
111.0
A
CYS
17
A
SG
CYS
17
1_555
A
F3S
70
E
FE3
F3S
1_555
A
F3S
70
E
S3
F3S
1_555
114.2
A
F3S
70
E
S1
F3S
1_555
A
F3S
70
E
FE3
F3S
1_555
A
F3S
70
E
S3
F3S
1_555
101.8
A
CYS
17
A
SG
CYS
17
1_555
A
F3S
70
E
FE3
F3S
1_555
A
F3S
70
E
S4
F3S
1_555
117.7
A
F3S
70
E
S1
F3S
1_555
A
F3S
70
E
FE3
F3S
1_555
A
F3S
70
E
S4
F3S
1_555
109.3
A
F3S
70
E
S3
F3S
1_555
A
F3S
70
E
FE3
F3S
1_555
A
F3S
70
E
S4
F3S
1_555
101.3
A
CYS
56
A
SG
CYS
56
1_555
A
F3S
70
E
FE4
F3S
1_555
A
F3S
70
E
S2
F3S
1_555
112.7
A
CYS
56
A
SG
CYS
56
1_555
A
F3S
70
E
FE4
F3S
1_555
A
F3S
70
E
S3
F3S
1_555
111.1
A
F3S
70
E
S2
F3S
1_555
A
F3S
70
E
FE4
F3S
1_555
A
F3S
70
E
S3
F3S
1_555
104.9
A
CYS
56
A
SG
CYS
56
1_555
A
F3S
70
E
FE4
F3S
1_555
A
F3S
70
E
S4
F3S
1_555
120.1
A
F3S
70
E
S2
F3S
1_555
A
F3S
70
E
FE4
F3S
1_555
A
F3S
70
E
S4
F3S
1_555
103.2
A
F3S
70
E
S3
F3S
1_555
A
F3S
70
E
FE4
F3S
1_555
A
F3S
70
E
S4
F3S
1_555
103.5
C
CYS
11
B
SG
CYS
11
1_555
C
F3S
71
H
FE1
F3S
1_555
C
F3S
71
H
S1
F3S
1_555
103.8
C
CYS
11
B
SG
CYS
11
1_555
C
F3S
71
H
FE1
F3S
1_555
C
F3S
71
H
S2
F3S
1_555
108.9
C
F3S
71
H
S1
F3S
1_555
C
F3S
71
H
FE1
F3S
1_555
C
F3S
71
H
S2
F3S
1_555
108.6
C
CYS
11
B
SG
CYS
11
1_555
C
F3S
71
H
FE1
F3S
1_555
C
F3S
71
H
S3
F3S
1_555
126.3
C
F3S
71
H
S1
F3S
1_555
C
F3S
71
H
FE1
F3S
1_555
C
F3S
71
H
S3
F3S
1_555
103.7
C
F3S
71
H
S2
F3S
1_555
C
F3S
71
H
FE1
F3S
1_555
C
F3S
71
H
S3
F3S
1_555
104.6
C
CYS
17
B
SG
CYS
17
1_555
C
F3S
71
H
FE3
F3S
1_555
C
F3S
71
H
S1
F3S
1_555
111.5
C
CYS
17
B
SG
CYS
17
1_555
C
F3S
71
H
FE3
F3S
1_555
C
F3S
71
H
S3
F3S
1_555
108.3
C
F3S
71
H
S1
F3S
1_555
C
F3S
71
H
FE3
F3S
1_555
C
F3S
71
H
S3
F3S
1_555
100.7
C
CYS
17
B
SG
CYS
17
1_555
C
F3S
71
H
FE3
F3S
1_555
C
F3S
71
H
S4
F3S
1_555
121.5
C
F3S
71
H
S1
F3S
1_555
C
F3S
71
H
FE3
F3S
1_555
C
F3S
71
H
S4
F3S
1_555
111.0
C
F3S
71
H
S3
F3S
1_555
C
F3S
71
H
FE3
F3S
1_555
C
F3S
71
H
S4
F3S
1_555
101.2
C
CYS
56
B
SG
CYS
56
1_555
C
F3S
71
H
FE4
F3S
1_555
C
F3S
71
H
S2
F3S
1_555
111.9
C
CYS
56
B
SG
CYS
56
1_555
C
F3S
71
H
FE4
F3S
1_555
C
F3S
71
H
S3
F3S
1_555
115.9
C
F3S
71
H
S2
F3S
1_555
C
F3S
71
H
FE4
F3S
1_555
C
F3S
71
H
S3
F3S
1_555
106.3
C
CYS
56
B
SG
CYS
56
1_555
C
F3S
71
H
FE4
F3S
1_555
C
F3S
71
H
S4
F3S
1_555
116.7
C
F3S
71
H
S2
F3S
1_555
C
F3S
71
H
FE4
F3S
1_555
C
F3S
71
H
S4
F3S
1_555
100.6
C
F3S
71
H
S3
F3S
1_555
C
F3S
71
H
FE4
F3S
1_555
C
F3S
71
H
S4
F3S
1_555
103.8
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LYS
3
A
N
LYS
3
A
O
GLU
64
A
O
GLU
64
A
N
GLU
65
A
N
GLU
65
C
O
ILE
63
B
O
ILE
63
C
O
GLU
64
B
O
GLU
64
C
N
LYS
3
B
N
LYS
3
A
N
GLU
26
A
N
GLU
26
A
O
GLN
34
A
O
GLN
34
C
N
GLU
26
B
N
GLU
26
C
O
GLN
34
B
O
GLN
34
1
6.68
1.10
114.20
120.88
A
A
A
CA
CB
SG
CYS
CYS
CYS
21
21
21
N
1
11.26
1.10
114.20
125.46
A
A
A
CA
CB
SG
CYS
CYS
CYS
48
48
48
N
1
10.98
1.10
114.20
125.18
C
C
C
CA
CB
SG
CYS
CYS
CYS
48
48
48
N
0.2888
0.2388
0.2413
2.25
35.00
337
6508
96.8
Random
1
THROUGHOUT
0
MOLECULAR REPLACEMENT
pdb entry 1VJW
Engh & Huber
2.25
35.00
46
1056
18
0
992
0.02
1.48
0.405
2.951
28.06
2.25
35.0
1SIZ
6508
0
0
0.1
1
4.8
3.4
94.8
0.22
2.25
2.37
81.5
data reduction
MOSFLM
data scaling
SCALA
phasing
MOLREP
refinement
CNS
data scaling
CCP4
(SCALA)
Crystal structure of the [Fe3S4]-ferredoxin from the hyperthermophilic archaeon Pyrococcus furiosus
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
2
N
N
2
N
N
3
N
N
4
N
N
4
N
N
The biological assembly is either the dimer in the asymmetric unit or a monomer
A
ALA
15
A
ALA
15
HELX_P
A
CYS
21
A
CYS
21
1
1
7
A
ASP
42
A
ASP
42
HELX_P
A
CYS
56
A
CYS
56
1
2
15
C
ALA
15
B
ALA
15
HELX_P
C
CYS
21
B
CYS
21
1
3
7
C
ASP
42
B
ASP
42
HELX_P
C
CYS
56
B
CYS
56
1
4
15
disulf
2.040
A
CYS
21
A
SG
CYS
21
1_555
A
CYS
48
A
SG
CYS
48
1_555
disulf
2.036
C
CYS
21
B
SG
CYS
21
1_555
C
CYS
48
B
SG
CYS
48
1_555
metalc
2.417
A
CYS
11
A
SG
CYS
11
1_555
A
F3S
70
E
FE1
F3S
1_555
metalc
2.229
A
CYS
17
A
SG
CYS
17
1_555
A
F3S
70
E
FE3
F3S
1_555
metalc
2.263
A
CYS
56
A
SG
CYS
56
1_555
A
F3S
70
E
FE4
F3S
1_555
metalc
2.453
A
3CO
74
D
CO
3CO
1_555
A
HOH
104
I
O
HOH
1_555
metalc
2.662
C
CYS
11
B
SG
CYS
11
1_555
C
F3S
71
H
FE1
F3S
1_555
metalc
2.235
C
CYS
17
B
SG
CYS
17
1_555
C
F3S
71
H
FE3
F3S
1_555
metalc
2.339
C
CYS
56
B
SG
CYS
56
1_555
C
F3S
71
H
FE4
F3S
1_555
metalc
2.041
C
3CO
75
G
CO
3CO
1_555
C
HOH
87
J
O
HOH
1_555
ELECTRON TRANSPORT
thermostability, iron-sulfur clusters, dimer, ELECTRON TRANSPORT
FER_PYRFU
UNP
1
1
P29603
AWKVSVDQDTCIGDAICASLCPDVFEMNDEGKAQPKVEVIEDEELYNCAKEAMEACPVSAITIEEA
1
66
1SIZ
1
66
P29603
A
1
1
66
1
66
1SIZ
1
66
P29603
C
1
1
66
4
2
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
TRP
2
A
TRP
2
A
VAL
6
A
VAL
6
A
ILE
61
A
ILE
61
A
GLU
65
A
GLU
65
C
ILE
61
B
ILE
61
C
GLU
65
B
GLU
65
C
TRP
2
B
TRP
2
C
VAL
6
B
VAL
6
A
PHE
25
A
PHE
25
A
MET
27
A
MET
27
A
ALA
33
A
ALA
33
A
PRO
35
A
PRO
35
C
PHE
25
B
PHE
25
C
MET
27
B
MET
27
C
ALA
33
B
ALA
33
C
PRO
35
B
PRO
35
BINDING SITE FOR RESIDUE 3CO A 74
A
3CO
74
Software
2
BINDING SITE FOR RESIDUE 3CO C 75
C
3CO
75
Software
2
BINDING SITE FOR RESIDUE F3S A 70
A
F3S
70
Software
8
BINDING SITE FOR RESIDUE F3S C 71
C
F3S
71
Software
8
A
HOH
104
I
HOH
2
1_555
C
ILE
12
B
ILE
12
2
1_455
A
ILE
12
A
ILE
12
2
1_655
C
HOH
87
J
HOH
2
1_555
A
CYS
11
A
CYS
11
8
1_555
A
ILE
12
A
ILE
12
8
1_555
A
ASP
14
A
ASP
14
8
1_555
A
ALA
15
A
ALA
15
8
1_555
A
ILE
16
A
ILE
16
8
1_555
A
CYS
17
A
CYS
17
8
1_555
A
ALA
33
A
ALA
33
8
1_555
A
CYS
56
A
CYS
56
8
1_555
C
CYS
11
B
CYS
11
8
1_555
C
ILE
12
B
ILE
12
8
1_555
C
ASP
14
B
ASP
14
8
1_555
C
ALA
15
B
ALA
15
8
1_555
C
ILE
16
B
ILE
16
8
1_555
C
CYS
17
B
CYS
17
8
1_555
C
ALA
33
B
ALA
33
8
1_555
C
CYS
56
B
CYS
56
8
1_555
19
P 21 21 21