1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Simpson, R.J.Y. Lee, S.H.Y. Bartle, N. Matthews, J.M. Mackay, J.P. Crossley, M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer US J.Biol.Chem. JBCHA3 0071 0021-9258 279 39789 39797 10.1074/jbc.M404130200 15234987 A Classic Zinc Finger from Friend of GATA Mediates an Interaction with the Coiled-coil of Transforming Acidic Coiled-coil 3. 2004 10.2210/pdb1srk/pdb pdb_00001srk 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 SINGLE WAVELENGTH M 1 1.0 3814.467 Zinc finger protein ZFPM1 residues 328-360 E330K, L336R, E349A 1 man polymer 65.409 ZINC ION 1 syn non-polymer Zinc finger protein multitype 1, Friend of GATA protein 1, Friend of GATA-1, FOG-1 no no GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n house mouse Mus Escherichia Escherichia coli sample ZFPM1, FOG1, FOG 10090 Mus musculus 469008 Escherichia coli BL21(DE3) BL21 DE3 plasmid pGEX-2T database_2 pdbx_nmr_software pdbx_struct_assembly pdbx_struct_conn_angle pdbx_struct_oper_list struct_conn struct_ref_seq_dif struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 2004-09-21 1 1 2008-04-29 1 2 2011-07-13 1 3 2021-10-27 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_nmr_software.name _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id RCSB Y RCSB 2004-03-22 REL REL ZN ZINC ION Structure was determined using standard 2D homonuclear NMR spectroscopy structures with the lowest energy 1000 20 2D NOESY 2D TOCSY DQF-COSY HNHA 0 mM 5.6 ambient 275 K 0 mM 5.6 ambient 275 K final structures were based on 859 unambiguous NOE-derived distance constraints, 20 ambiguous constraints and 31 dihedral angle restraints simulated annealing, molecular dynamics, torsion angle dynamics 1 lowest energy 0.27 mM FOG-F3, 2mM TCEP, 1 mM ZnSO4, 95% H2O, 5% D2O 95% H2O/5% D2O 0.245 mM 15N-FOG-F3, 2mM TCEP, 1 mM ZnSO4, 95% H2O, 5% D2O 95% H2O/5% D2O Bruker processing XwinNMR 2.6 Bartels et al data analysis XEASY 1.3.13 Guntert et al refinement DYANA 1.5 Linge et al structure solution ARIA 1.2 600 Bruker DRX ZN 36 2 ZN ZN 36 A GLY 1 n 1 GLY 1 A SER 2 n 2 SER 2 A SER 3 n 3 SER 3 A GLY 4 n 4 GLY 4 A LYS 5 n 5 LYS 5 A ARG 6 n 6 ARG 6 A PRO 7 n 7 PRO 7 A PHE 8 n 8 PHE 8 A VAL 9 n 9 VAL 9 A CYS 10 n 10 CYS 10 A ARG 11 n 11 ARG 11 A ILE 12 n 12 ILE 12 A CYS 13 n 13 CYS 13 A LEU 14 n 14 LEU 14 A SER 15 n 15 SER 15 A ALA 16 n 16 ALA 16 A PHE 17 n 17 PHE 17 A THR 18 n 18 THR 18 A THR 19 n 19 THR 19 A LYS 20 n 20 LYS 20 A ALA 21 n 21 ALA 21 A ASN 22 n 22 ASN 22 A CYS 23 n 23 CYS 23 A ALA 24 n 24 ALA 24 A ARG 25 n 25 ARG 25 A HIS 26 n 26 HIS 26 A LEU 27 n 27 LEU 27 A LYS 28 n 28 LYS 28 A VAL 29 n 29 VAL 29 A HIS 30 n 30 HIS 30 A THR 31 n 31 THR 31 A ASP 32 n 32 ASP 32 A THR 33 n 33 THR 33 A LEU 34 n 34 LEU 34 A SER 35 n 35 SER 35 A author_defined_assembly 1 monomeric A CYS 10 A SG CYS 10 1_555 A ZN 36 B ZN ZN 1_555 A CYS 13 A SG CYS 13 1_555 105.6 A CYS 10 A SG CYS 10 1_555 A ZN 36 B ZN ZN 1_555 A HIS 26 A NE2 HIS 26 1_555 107.9 A CYS 13 A SG CYS 13 1_555 A ZN 36 B ZN ZN 1_555 A HIS 26 A NE2 HIS 26 1_555 112.7 A CYS 10 A SG CYS 10 1_555 A ZN 36 B ZN ZN 1_555 A HIS 30 A NE2 HIS 30 1_555 109.2 A CYS 13 A SG CYS 13 1_555 A ZN 36 B ZN ZN 1_555 A HIS 30 A NE2 HIS 30 1_555 112.4 A HIS 26 A NE2 HIS 26 1_555 A ZN 36 B ZN ZN 1_555 A HIS 30 A NE2 HIS 30 1_555 108.8 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 identity operation 0.0000000000 0.0000000000 0.0000000000 A N PHE 8 A N PHE 8 A O PHE 17 A O PHE 17 6 A A HZ1 OD2 LYS ASP 28 32 1.55 1 A SER 2 -174.81 -42.07 1 A SER 3 -162.38 -152.93 1 A PRO 7 -72.29 28.17 1 A PHE 8 -94.29 53.18 1 A CYS 13 -95.16 -128.52 1 A LEU 14 -153.66 36.17 1 A HIS 30 -77.74 42.20 1 A THR 31 175.94 -45.18 2 A LYS 5 -173.30 133.71 2 A PRO 7 -60.10 4.30 2 A CYS 13 -101.70 -123.38 2 A LEU 14 -157.26 36.20 2 A THR 31 -176.39 31.78 2 A ASP 32 -179.29 130.61 3 A LYS 5 -72.04 -145.85 3 A ARG 6 -159.07 65.74 3 A CYS 13 -96.24 -124.38 3 A LEU 14 -159.96 37.46 3 A HIS 30 -79.82 25.12 3 A THR 31 -179.95 34.97 3 A LEU 34 -79.67 43.62 4 A SER 3 61.51 -139.93 4 A CYS 13 -102.82 -122.53 4 A LEU 14 -159.54 34.92 4 A HIS 30 -78.26 43.10 4 A THR 31 -177.93 -45.76 4 A LEU 34 -161.08 -42.98 5 A SER 3 73.24 134.29 5 A PRO 7 -65.87 13.03 5 A PHE 8 -85.02 48.31 5 A CYS 13 -96.42 -124.89 5 A LEU 14 -160.09 39.66 5 A HIS 30 -77.16 47.56 5 A THR 31 179.06 -39.86 5 A LEU 34 -151.78 54.98 6 A SER 3 71.81 139.71 6 A CYS 13 -100.20 -121.87 6 A LEU 14 -159.84 34.03 6 A HIS 30 -77.74 34.30 6 A THR 31 -162.28 -45.11 6 A LEU 34 -144.09 44.93 7 A SER 3 -174.35 136.35 7 A ARG 6 -98.78 33.19 7 A CYS 13 -104.52 -123.92 7 A LEU 14 -160.02 39.48 7 A THR 31 -176.09 32.29 7 A ASP 32 -170.92 132.60 8 A PRO 7 -71.42 24.83 8 A PHE 8 -91.50 49.66 8 A CYS 13 -99.15 -124.54 8 A LEU 14 -159.13 36.09 8 A THR 31 -87.21 42.64 8 A ASP 32 -173.25 -98.75 8 A LEU 34 -157.80 -43.31 9 A SER 2 -166.22 50.50 9 A PRO 7 -63.24 17.33 9 A PHE 8 -86.01 49.50 9 A CYS 13 -104.07 -121.97 9 A LEU 14 -160.71 37.02 9 A LEU 34 -79.00 46.77 10 A PRO 7 -72.19 25.97 10 A PHE 8 -91.37 49.30 10 A CYS 13 -103.67 -122.90 10 A LEU 14 -160.38 36.35 10 A HIS 30 -79.65 25.17 10 A THR 31 -173.75 35.01 10 A ASP 32 -168.13 -50.05 10 A THR 33 -90.24 50.49 11 A SER 2 -177.56 -126.41 11 A SER 3 68.11 127.91 11 A ARG 6 -105.80 59.67 11 A CYS 13 -99.23 -123.61 11 A LEU 14 -157.64 35.26 11 A HIS 30 -79.70 42.48 11 A THR 31 -175.30 -47.65 11 A ASP 32 -83.28 -145.89 11 A LEU 34 -77.92 47.10 12 A SER 2 -76.22 -134.60 12 A ARG 6 -115.08 63.58 12 A CYS 13 -99.33 -124.63 12 A LEU 14 -158.10 36.48 12 A THR 31 -85.92 40.34 12 A ASP 32 -171.17 -69.02 12 A THR 33 -84.07 39.20 12 A LEU 34 -141.27 43.10 13 A ARG 6 -102.76 42.89 13 A CYS 13 -98.60 -124.85 13 A LEU 14 -157.52 36.92 14 A LYS 5 69.07 145.97 14 A ARG 6 -104.60 51.79 14 A CYS 13 -94.65 -123.92 14 A LEU 14 -159.01 35.32 14 A HIS 30 -78.90 44.79 14 A THR 31 -173.92 -46.91 15 A SER 3 65.58 129.04 15 A LYS 5 66.98 172.36 15 A CYS 13 -96.82 -125.27 15 A LEU 14 -160.27 36.53 15 A HIS 30 -78.60 37.00 15 A THR 31 177.43 -45.08 15 A LEU 34 -79.38 46.59 16 A SER 2 -170.00 -135.66 16 A PRO 7 -71.52 27.50 16 A PHE 8 -94.97 44.28 16 A CYS 13 -95.07 -125.13 16 A LEU 14 -159.57 34.18 16 A HIS 30 -78.44 40.83 16 A THR 31 -178.10 -40.61 16 A ASP 32 -72.43 -100.12 17 A SER 2 -157.80 45.63 17 A LYS 5 73.11 134.74 17 A ARG 6 -109.76 68.74 17 A CYS 13 -92.31 -123.92 17 A LEU 14 -158.22 33.87 17 A LEU 34 -87.22 38.76 18 A LYS 5 -173.80 -171.05 18 A PRO 7 -68.55 22.82 18 A PHE 8 -91.30 50.96 18 A CYS 13 -95.39 -124.14 18 A LEU 14 -160.44 40.61 18 A ASP 32 65.01 -51.24 18 A LEU 34 -147.19 -41.75 19 A SER 3 -159.67 -143.09 19 A CYS 13 -100.78 -124.78 19 A LEU 14 -155.05 37.38 19 A HIS 30 -77.98 42.21 19 A THR 31 179.55 -50.05 19 A ASP 32 -91.86 32.23 19 A THR 33 -161.13 36.65 19 A LEU 34 -159.62 47.93 20 A LYS 5 -170.34 145.29 20 A PRO 7 -67.50 7.22 20 A CYS 13 -99.88 -124.11 20 A LEU 14 -157.39 37.94 20 A HIS 30 -79.79 31.18 20 A THR 31 -171.37 30.83 20 A ASP 32 -172.10 -133.58 Solution structure of the third zinc finger domain of FOG-1 1 N N 2 N N A THR 19 A THR 19 HELX_P A LYS 28 A LYS 28 1 1 10 A VAL 29 A VAL 29 HELX_P A THR 31 A THR 31 5 2 3 metalc 2.243 A CYS 10 A SG CYS 10 1_555 A ZN 36 B ZN ZN 1_555 metalc 2.309 A CYS 13 A SG CYS 13 1_555 A ZN 36 B ZN ZN 1_555 metalc 1.950 A HIS 26 A NE2 HIS 26 1_555 A ZN 36 B ZN ZN 1_555 metalc 1.953 A HIS 30 A NE2 HIS 30 1_555 A ZN 36 B ZN ZN 1_555 TRANSCRIPTION classical zinc finger, TRANSCRIPTION FOG1_MOUSE UNP 1 328 O35615 SGERPFVCLICLSAFTTKANCERHLKVHTDTLS 328 360 1SRK 3 35 O35615 A 1 3 35 1 expression tag GLY 1 1SRK A O35615 UNP 1 1 expression tag SER 2 1SRK A O35615 UNP 2 1 GLU engineered mutation LYS 5 1SRK A O35615 UNP 330 5 1 LEU engineered mutation ARG 11 1SRK A O35615 UNP 336 11 1 GLU engineered mutation ALA 24 1SRK A O35615 UNP 349 24 2 anti-parallel A PHE 8 A PHE 8 A VAL 9 A VAL 9 A ALA 16 A ALA 16 A PHE 17 A PHE 17 BINDING SITE FOR RESIDUE ZN A 36 A ZN 36 Software 4 A CYS 10 A CYS 10 4 1_555 A CYS 13 A CYS 13 4 1_555 A HIS 26 A HIS 26 4 1_555 A HIS 30 A HIS 30 4 1_555