0.007299
0.000000
0.000000
0.000000
0.007299
0.000000
0.000000
0.000000
0.017544
0.00000
0.00000
0.00000
Mueller, C.W.
Harrison, S.C.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
137.000
137.000
57.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
O
N
89
N
P
N
90
N
O
N
91
N
O
N
92
N
O
N
93
N
C
N
94
R
C
N
95
N
O
N
96
S
C
N
97
N
O
N
98
N
C
N
99
R
C
Y
100
N
N
Y
101
N
C
Y
102
N
N
Y
103
N
C
Y
104
N
C
N
105
N
N
Y
106
N
N
Y
107
N
C
Y
108
N
N
Y
109
N
C
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
O
N
125
N
P
N
126
N
O
N
127
N
O
N
128
N
O
N
129
N
C
N
130
R
C
N
131
N
O
N
132
S
C
N
133
N
O
N
134
N
C
N
135
R
C
N
136
N
N
N
137
N
C
N
138
N
O
N
139
N
N
N
140
N
C
N
141
N
N
N
142
N
C
N
143
N
C
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
P
N
160
N
O
N
161
N
O
N
162
N
O
N
163
N
C
N
164
R
C
N
165
N
O
N
166
S
C
N
167
N
O
N
168
N
C
N
169
R
C
Y
170
N
N
Y
171
N
C
Y
172
N
N
Y
173
N
C
N
174
N
C
N
175
N
O
N
176
N
N
N
177
N
C
N
178
N
N
N
179
N
N
Y
180
N
C
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
O
N
196
N
P
N
197
N
O
N
198
N
O
N
199
N
O
N
200
N
C
N
201
R
C
N
202
N
O
N
203
S
C
N
204
N
O
N
205
N
C
N
206
R
C
N
207
N
N
N
208
N
C
N
209
N
O
N
210
N
N
N
211
N
C
N
212
N
O
N
213
N
C
N
214
N
C
N
215
N
C
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
N
N
232
S
C
N
233
N
C
N
234
N
O
N
235
N
C
N
236
N
C
N
237
N
C
N
238
N
O
N
239
N
N
N
240
N
O
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
N
N
252
S
C
N
253
N
C
N
254
N
O
N
255
N
C
N
256
N
C
N
257
N
C
N
258
N
O
N
259
N
O
N
260
N
O
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
N
N
271
N
C
N
272
N
C
N
273
N
O
N
274
N
O
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
N
N
281
S
C
N
282
N
C
N
283
N
O
N
284
N
C
Y
285
N
C
Y
286
N
N
Y
287
N
C
Y
288
N
C
Y
289
N
N
N
290
N
O
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
O
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
S
C
N
309
N
C
N
310
N
C
N
311
N
C
N
312
N
O
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
N
N
327
S
C
N
328
N
C
N
329
N
O
N
330
N
C
N
331
N
C
N
332
N
C
N
333
N
C
N
334
N
O
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
N
353
N
C
N
354
N
C
N
355
N
C
N
356
N
N
N
357
N
O
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
N
N
374
S
C
N
375
N
C
N
376
N
O
N
377
N
C
N
378
N
C
N
379
N
S
N
380
N
C
N
381
N
O
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
N
N
394
S
C
N
395
N
C
N
396
N
O
N
397
N
C
Y
398
N
C
Y
399
N
C
Y
400
N
C
Y
401
N
C
Y
402
N
C
Y
403
N
C
N
404
N
O
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
N
N
417
S
C
N
418
N
C
N
419
N
O
N
420
N
C
N
421
N
C
N
422
N
C
N
423
N
O
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
N
N
434
S
C
N
435
N
C
N
436
N
O
N
437
N
C
N
438
N
O
N
439
N
O
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
N
N
448
S
C
N
449
N
C
N
450
N
O
N
451
R
C
N
452
N
O
N
453
N
C
N
454
N
O
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
N
N
465
S
C
N
466
N
C
N
467
N
O
N
468
N
C
Y
469
N
C
Y
470
N
C
Y
471
N
C
Y
472
N
N
Y
473
N
C
Y
474
N
C
Y
475
N
C
Y
476
N
C
Y
477
N
C
N
478
N
O
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
484
N
H
N
485
N
H
N
486
N
H
N
487
N
H
N
488
N
H
N
489
N
H
N
490
N
H
N
491
N
N
N
492
S
C
N
493
N
C
N
494
N
O
N
495
N
C
Y
496
N
C
Y
497
N
C
Y
498
N
C
Y
499
N
C
Y
500
N
C
Y
501
N
C
N
502
N
O
N
503
N
O
N
504
N
H
N
505
N
H
N
506
N
H
N
507
N
H
N
508
N
H
N
509
N
H
N
510
N
H
N
511
N
H
N
512
N
H
N
513
N
H
N
514
N
H
N
515
N
N
N
516
S
C
N
517
N
C
N
518
N
O
N
519
N
C
N
520
N
C
N
521
N
C
N
522
N
O
N
523
N
H
N
524
N
H
N
525
N
H
N
526
N
H
N
527
N
H
N
528
N
H
N
529
N
H
N
530
N
H
N
531
N
H
N
532
N
H
N
533
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
doub
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
Y
106
N
sing
Y
107
N
sing
Y
108
N
doub
N
109
N
sing
Y
110
N
sing
Y
111
N
sing
Y
112
N
doub
N
113
N
sing
Y
114
N
doub
N
115
N
sing
N
116
N
sing
Y
117
N
sing
Y
118
N
doub
N
119
N
sing
Y
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
doub
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
doub
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
Y
179
N
sing
Y
180
N
sing
Y
181
N
doub
N
182
N
sing
Y
183
N
sing
N
184
N
sing
Y
185
N
doub
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
doub
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
doub
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
doub
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
doub
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
doub
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
doub
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
doub
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
doub
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
doub
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
Y
289
N
sing
Y
290
N
doub
Y
291
N
doub
N
292
N
sing
Y
293
N
sing
N
294
N
sing
Y
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
doub
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
doub
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
doub
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
doub
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
doub
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
Y
397
N
doub
Y
398
N
sing
Y
399
N
sing
N
400
N
sing
Y
401
N
doub
N
402
N
sing
Y
403
N
doub
N
404
N
sing
Y
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
doub
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
doub
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
doub
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
doub
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
Y
466
N
doub
Y
467
N
sing
Y
468
N
sing
N
469
N
sing
Y
470
N
doub
Y
471
N
sing
Y
472
N
sing
N
473
N
sing
Y
474
N
sing
Y
475
N
doub
N
476
N
sing
Y
477
N
doub
N
478
N
sing
Y
479
N
sing
N
480
N
sing
N
481
N
sing
N
482
N
sing
N
483
N
sing
N
484
N
sing
N
485
N
sing
N
486
N
sing
N
487
N
sing
N
488
N
sing
N
489
N
doub
N
490
N
sing
N
491
N
sing
N
492
N
sing
N
493
N
sing
Y
494
N
doub
Y
495
N
sing
Y
496
N
sing
N
497
N
sing
Y
498
N
doub
N
499
N
sing
Y
500
N
doub
N
501
N
sing
Y
502
N
sing
N
503
N
sing
N
504
N
sing
N
505
N
sing
N
506
N
sing
N
507
N
sing
N
508
N
sing
N
509
N
sing
N
510
N
sing
N
511
N
sing
N
512
N
sing
N
513
N
doub
N
514
N
sing
N
515
N
sing
N
516
N
sing
N
517
N
sing
N
518
N
sing
N
519
N
sing
N
520
N
sing
N
521
N
sing
N
522
N
sing
N
523
N
sing
N
524
N
sing
UK
Nature
NATUAS
0006
0028-0836
373
311
317
10.1038/373311a0
7830764
Structure of the NF-kappa B p50 homodimer bound to DNA.
1995
10.2210/pdb1svc/pdb
pdb_00001svc
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
113.00
1
AREA DETECTOR
SIEMENS
SINGLE WAVELENGTH
M
x-ray
1
1.0
5878.824
DNA (5'-D(*AP*GP*AP*TP*GP*GP*GP*GP*AP*AP*TP*CP*CP*CP*CP*TP*A P*GP*A)-3')
1
syn
polymer
41128.859
PROTEIN (NUCLEAR FACTOR KAPPA-B (NF-KB))
1
man
polymer
18.015
water
63
nat
water
MUTANT C62A
no
no
(DA)(DG)(DA)(DT)(DG)(DG)(DG)(DG)(DA)(DA)(DT)(DC)(DC)(DC)(DC)(DT)(DA)(DG)(DA)
AGATGGGGAATCCCCTAGA
D
polydeoxyribonucleotide
no
no
AEDDPYLGRPEQMFHLDPSLTHTIFNPEVFQPQMALPTADGPYLQILEQPKQRGFRFRYVAEGPSHGGLPGASSEKNKKS
YPQVKICNYVGPAKVIVQLVTNGKNIHLHAHSLVGKHCEDGICTVTAGPKDMVVGFANLGILHVTKKKVFETLEARMTEA
CIRGYNPGLLVHPDLAYLQAEGGGDRQLGDREKELIRQAALQQTKEMDLSVVRLMFTAFLPDSTGSFTRRLEPVVSDAIY
DSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEEENGGVWEGFGDFSPTDVHRQFAIVFKTPKYKD
INITKPASVFVQLRRKSDLETSEPKPFLYYPEIKDKEEVQRKRQK
AEDDPYLGRPEQMFHLDPSLTHTIFNPEVFQPQMALPTADGPYLQILEQPKQRGFRFRYVAEGPSHGGLPGASSEKNKKS
YPQVKICNYVGPAKVIVQLVTNGKNIHLHAHSLVGKHCEDGICTVTAGPKDMVVGFANLGILHVTKKKVFETLEARMTEA
CIRGYNPGLLVHPDLAYLQAEGGGDRQLGDREKELIRQAALQQTKEMDLSVVRLMFTAFLPDSTGSFTRRLEPVVSDAIY
DSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEEENGGVWEGFGDFSPTDVHRQFAIVFKTPKYKD
INITKPASVFVQLRRKSDLETSEPKPFLYYPEIKDKEEVQRKRQK
P
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
sample
9606
Homo sapiens
2.83
56.51
VAPOR DIFFUSION, HANGING DROP
VAPOR DIFFUSION, HANGING DROP
WATER
1
PEG 6000
1
NACL
1
HEPES
1
DTT
1
3.521
1
19
D
5
D
15
2.488
D_DG5:DC15_D
1
-10.339
0.163
0.160
-0.103
-4.270
1
19
D
6
D
14
-5.399
D_DG6:DC14_D
2
-6.313
0.291
-0.365
-0.330
8.761
1
19
D
7
D
13
0.642
D_DG7:DC13_D
3
-10.613
-0.139
0.243
-0.056
8.022
1
19
D
8
D
12
3.658
D_DG8:DC12_D
4
-11.576
-0.464
-0.081
0.025
2.246
1
20
D
9
D
11
1.361
D_DA9:DT11_D
5
-28.971
-0.279
-0.143
-0.145
-2.246
1
20
D
11
D
9
1.361
D_DT11:DA9_D
6
-28.971
0.279
-0.143
-0.145
-8.022
1
19
D
12
D
8
3.658
D_DC12:DG8_D
7
-11.576
0.464
-0.081
0.025
-8.761
1
19
D
13
D
7
0.642
D_DC13:DG7_D
8
-10.613
0.139
0.243
-0.056
4.270
1
19
D
14
D
6
-5.399
D_DC14:DG6_D
9
-6.313
-0.291
-0.365
-0.330
-3.521
1
19
D
15
D
5
2.488
D_DC15:DG5_D
10
-10.339
-0.163
0.160
-0.103
3.858
35.171
D
D
5
6
-4.209
D
D
15
14
3.834
-2.536
0.304
-0.345
DD_DG5DG6:DC14DC15_DD
1
4.131
-6.856
34.846
-0.124
0.225
3.174
31.916
D
D
6
7
1.316
D
D
14
13
3.137
0.721
-0.454
0.260
DD_DG6DG7:DC13DC14_DD
2
-4.395
8.017
31.611
0.346
0.053
3.672
28.599
D
D
7
8
-6.534
D
D
13
12
3.593
-3.218
1.012
-0.314
DD_DG7DG8:DC12DC13_DD
3
2.241
-4.551
28.334
0.178
-1.482
3.483
39.761
D
D
8
9
-2.377
D
D
12
11
3.435
-1.615
-1.006
0.018
DD_DG8DA9:DT11DC12_DD
4
-2.354
3.463
39.662
0.226
1.189
6.365
72.923
D
D
9
11
5.330
D
D
11
9
6.406
6.329
0.000
-0.301
DD_DA9DT11:DA9DT11_DD
5
0.000
0.000
72.686
-0.656
0.000
3.483
39.761
D
D
11
12
-2.377
D
D
9
8
3.435
-1.615
1.006
0.018
DD_DT11DC12:DG8DA9_DD
6
2.354
-3.463
39.662
0.226
-1.189
3.672
28.599
D
D
12
13
-6.534
D
D
8
7
3.592
-3.218
-1.012
-0.314
DD_DC12DC13:DG7DG8_DD
7
-2.241
4.551
28.334
0.178
1.482
3.174
31.916
D
D
13
14
1.316
D
D
7
6
3.137
0.721
0.454
0.260
DD_DC13DC14:DG6DG7_DD
8
4.395
-8.017
31.611
0.346
-0.053
3.858
35.171
D
D
14
15
-4.209
D
D
6
5
3.834
-2.536
-0.304
-0.345
DD_DC14DC15:DG5DG6_DD
9
-4.131
6.856
34.846
-0.124
-0.225
database_2
struct_ref_seq_dif
chem_comp_atom
chem_comp_bond
repository
Initial release
Version format compliance
Version format compliance
Database references
Data collection
1
0
1996-06-10
1
1
2008-05-22
1
2
2011-07-13
1
3
2021-11-03
1
4
2024-02-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
Y
NDB
1995-11-27
REL
HOH
water
HOH
406
3
HOH
HOH
406
D
HOH
409
3
HOH
HOH
409
D
HOH
412
3
HOH
HOH
412
D
HOH
419
3
HOH
HOH
419
D
HOH
421
3
HOH
HOH
421
D
HOH
422
3
HOH
HOH
422
D
HOH
425
3
HOH
HOH
425
D
HOH
427
3
HOH
HOH
427
D
HOH
430
3
HOH
HOH
430
D
HOH
434
3
HOH
HOH
434
D
HOH
437
3
HOH
HOH
437
D
HOH
454
3
HOH
HOH
454
D
HOH
455
3
HOH
HOH
455
D
HOH
457
3
HOH
HOH
457
D
HOH
463
3
HOH
HOH
463
D
HOH
401
3
HOH
HOH
401
P
HOH
402
3
HOH
HOH
402
P
HOH
403
3
HOH
HOH
403
P
HOH
404
3
HOH
HOH
404
P
HOH
405
3
HOH
HOH
405
P
HOH
407
3
HOH
HOH
407
P
HOH
408
3
HOH
HOH
408
P
HOH
410
3
HOH
HOH
410
P
HOH
411
3
HOH
HOH
411
P
HOH
413
3
HOH
HOH
413
P
HOH
414
3
HOH
HOH
414
P
HOH
415
3
HOH
HOH
415
P
HOH
416
3
HOH
HOH
416
P
HOH
417
3
HOH
HOH
417
P
HOH
418
3
HOH
HOH
418
P
HOH
420
3
HOH
HOH
420
P
HOH
423
3
HOH
HOH
423
P
HOH
424
3
HOH
HOH
424
P
HOH
426
3
HOH
HOH
426
P
HOH
428
3
HOH
HOH
428
P
HOH
429
3
HOH
HOH
429
P
HOH
431
3
HOH
HOH
431
P
HOH
432
3
HOH
HOH
432
P
HOH
433
3
HOH
HOH
433
P
HOH
435
3
HOH
HOH
435
P
HOH
436
3
HOH
HOH
436
P
HOH
438
3
HOH
HOH
438
P
HOH
439
3
HOH
HOH
439
P
HOH
440
3
HOH
HOH
440
P
HOH
441
3
HOH
HOH
441
P
HOH
442
3
HOH
HOH
442
P
HOH
443
3
HOH
HOH
443
P
HOH
444
3
HOH
HOH
444
P
HOH
445
3
HOH
HOH
445
P
HOH
446
3
HOH
HOH
446
P
HOH
447
3
HOH
HOH
447
P
HOH
448
3
HOH
HOH
448
P
HOH
449
3
HOH
HOH
449
P
HOH
450
3
HOH
HOH
450
P
HOH
451
3
HOH
HOH
451
P
HOH
452
3
HOH
HOH
452
P
HOH
453
3
HOH
HOH
453
P
HOH
456
3
HOH
HOH
456
P
HOH
458
3
HOH
HOH
458
P
HOH
459
3
HOH
HOH
459
P
HOH
460
3
HOH
HOH
460
P
HOH
461
3
HOH
HOH
461
P
HOH
462
3
HOH
HOH
462
P
A
1
n
1
DA
1
D
G
2
n
2
DG
2
D
A
3
n
3
DA
3
D
T
4
n
4
DT
4
D
G
5
n
5
DG
5
D
G
6
n
6
DG
6
D
G
7
n
7
DG
7
D
G
8
n
8
DG
8
D
A
9
n
9
DA
9
D
A
10
n
10
DA
10
D
T
11
n
11
DT
11
D
C
12
n
12
DC
12
D
C
13
n
13
DC
13
D
C
14
n
14
DC
14
D
C
15
n
15
DC
15
D
T
16
n
16
DT
16
D
A
17
n
17
DA
17
D
G
18
n
18
DG
18
D
A
19
n
19
DA
19
D
n
1
2
P
n
2
3
P
n
3
4
P
n
4
5
P
n
5
6
P
n
6
7
P
n
7
8
P
n
8
9
P
n
9
10
P
n
10
11
P
n
11
12
P
n
12
13
P
n
13
14
P
n
14
15
P
n
15
16
P
n
16
17
P
n
17
18
P
n
18
19
P
n
19
20
P
n
20
21
P
n
21
22
P
n
22
23
P
n
23
24
P
n
24
25
P
n
25
26
P
n
26
27
P
n
27
28
P
n
28
29
P
n
29
30
P
n
30
31
P
n
31
32
P
n
32
33
P
n
33
34
P
n
34
35
P
n
35
36
P
n
36
37
P
n
37
38
P
n
38
39
P
n
39
40
P
n
40
41
P
n
41
42
P
PRO
43
n
42
PRO
43
P
TYR
44
n
43
TYR
44
P
LEU
45
n
44
LEU
45
P
GLN
46
n
45
GLN
46
P
ILE
47
n
46
ILE
47
P
LEU
48
n
47
LEU
48
P
GLU
49
n
48
GLU
49
P
GLN
50
n
49
GLN
50
P
PRO
51
n
50
PRO
51
P
LYS
52
n
51
LYS
52
P
GLN
53
n
52
GLN
53
P
ARG
54
n
53
ARG
54
P
GLY
55
n
54
GLY
55
P
PHE
56
n
55
PHE
56
P
ARG
57
n
56
ARG
57
P
PHE
58
n
57
PHE
58
P
ARG
59
n
58
ARG
59
P
TYR
60
n
59
TYR
60
P
VAL
61
n
60
VAL
61
P
ALA
62
n
61
ALA
62
P
GLU
63
n
62
GLU
63
P
GLY
64
n
63
GLY
64
P
PRO
65
n
64
PRO
65
P
SER
66
n
65
SER
66
P
HIS
67
n
66
HIS
67
P
GLY
68
n
67
GLY
68
P
GLY
69
n
68
GLY
69
P
LEU
70
n
69
LEU
70
P
PRO
71
n
70
PRO
71
P
GLY
72
n
71
GLY
72
P
ALA
73
n
72
ALA
73
P
SER
74
n
73
SER
74
P
SER
75
n
74
SER
75
P
GLU
76
n
75
GLU
76
P
LYS
77
n
76
LYS
77
P
ASN
78
n
77
ASN
78
P
LYS
79
n
78
LYS
79
P
LYS
80
n
79
LYS
80
P
SER
81
n
80
SER
81
P
TYR
82
n
81
TYR
82
P
PRO
83
n
82
PRO
83
P
GLN
84
n
83
GLN
84
P
VAL
85
n
84
VAL
85
P
LYS
86
n
85
LYS
86
P
ILE
87
n
86
ILE
87
P
CYS
88
n
87
CYS
88
P
ASN
89
n
88
ASN
89
P
TYR
90
n
89
TYR
90
P
VAL
91
n
90
VAL
91
P
GLY
92
n
91
GLY
92
P
PRO
93
n
92
PRO
93
P
ALA
94
n
93
ALA
94
P
LYS
95
n
94
LYS
95
P
VAL
96
n
95
VAL
96
P
ILE
97
n
96
ILE
97
P
VAL
98
n
97
VAL
98
P
GLN
99
n
98
GLN
99
P
LEU
100
n
99
LEU
100
P
VAL
101
n
100
VAL
101
P
THR
102
n
101
THR
102
P
ASN
103
n
102
ASN
103
P
GLY
104
n
103
GLY
104
P
LYS
105
n
104
LYS
105
P
ASN
106
n
105
ASN
106
P
ILE
107
n
106
ILE
107
P
HIS
108
n
107
HIS
108
P
LEU
109
n
108
LEU
109
P
HIS
110
n
109
HIS
110
P
ALA
111
n
110
ALA
111
P
HIS
112
n
111
HIS
112
P
SER
113
n
112
SER
113
P
LEU
114
n
113
LEU
114
P
VAL
115
n
114
VAL
115
P
GLY
116
n
115
GLY
116
P
LYS
117
n
116
LYS
117
P
HIS
118
n
117
HIS
118
P
CYS
119
n
118
CYS
119
P
GLU
120
n
119
GLU
120
P
ASP
121
n
120
ASP
121
P
GLY
122
n
121
GLY
122
P
ILE
123
n
122
ILE
123
P
CYS
124
n
123
CYS
124
P
THR
125
n
124
THR
125
P
VAL
126
n
125
VAL
126
P
THR
127
n
126
THR
127
P
ALA
128
n
127
ALA
128
P
GLY
129
n
128
GLY
129
P
PRO
130
n
129
PRO
130
P
LYS
131
n
130
LYS
131
P
ASP
132
n
131
ASP
132
P
MET
133
n
132
MET
133
P
VAL
134
n
133
VAL
134
P
VAL
135
n
134
VAL
135
P
GLY
136
n
135
GLY
136
P
PHE
137
n
136
PHE
137
P
ALA
138
n
137
ALA
138
P
ASN
139
n
138
ASN
139
P
LEU
140
n
139
LEU
140
P
GLY
141
n
140
GLY
141
P
ILE
142
n
141
ILE
142
P
LEU
143
n
142
LEU
143
P
HIS
144
n
143
HIS
144
P
VAL
145
n
144
VAL
145
P
THR
146
n
145
THR
146
P
LYS
147
n
146
LYS
147
P
LYS
148
n
147
LYS
148
P
LYS
149
n
148
LYS
149
P
VAL
150
n
149
VAL
150
P
PHE
151
n
150
PHE
151
P
GLU
152
n
151
GLU
152
P
THR
153
n
152
THR
153
P
LEU
154
n
153
LEU
154
P
GLU
155
n
154
GLU
155
P
ALA
156
n
155
ALA
156
P
ARG
157
n
156
ARG
157
P
MET
158
n
157
MET
158
P
THR
159
n
158
THR
159
P
GLU
160
n
159
GLU
160
P
ALA
161
n
160
ALA
161
P
CYS
162
n
161
CYS
162
P
ILE
163
n
162
ILE
163
P
ARG
164
n
163
ARG
164
P
GLY
165
n
164
GLY
165
P
TYR
166
n
165
TYR
166
P
ASN
167
n
166
ASN
167
P
PRO
168
n
167
PRO
168
P
GLY
169
n
168
GLY
169
P
LEU
170
n
169
LEU
170
P
LEU
171
n
170
LEU
171
P
VAL
172
n
171
VAL
172
P
HIS
173
n
172
HIS
173
P
PRO
174
n
173
PRO
174
P
ASP
175
n
174
ASP
175
P
LEU
176
n
175
LEU
176
P
ALA
177
n
176
ALA
177
P
TYR
178
n
177
TYR
178
P
LEU
179
n
178
LEU
179
P
GLN
180
n
179
GLN
180
P
ALA
181
n
180
ALA
181
P
GLU
182
n
181
GLU
182
P
GLY
183
n
182
GLY
183
P
GLY
184
n
183
GLY
184
P
GLY
185
n
184
GLY
185
P
ASP
186
n
185
ASP
186
P
ARG
187
n
186
ARG
187
P
GLN
188
n
187
GLN
188
P
LEU
189
n
188
LEU
189
P
GLY
190
n
189
GLY
190
P
ASP
191
n
190
ASP
191
P
ARG
192
n
191
ARG
192
P
GLU
193
n
192
GLU
193
P
LYS
194
n
193
LYS
194
P
GLU
195
n
194
GLU
195
P
LEU
196
n
195
LEU
196
P
ILE
197
n
196
ILE
197
P
ARG
198
n
197
ARG
198
P
GLN
199
n
198
GLN
199
P
ALA
200
n
199
ALA
200
P
ALA
201
n
200
ALA
201
P
LEU
202
n
201
LEU
202
P
GLN
203
n
202
GLN
203
P
GLN
204
n
203
GLN
204
P
THR
205
n
204
THR
205
P
LYS
206
n
205
LYS
206
P
GLU
207
n
206
GLU
207
P
MET
208
n
207
MET
208
P
ASP
209
n
208
ASP
209
P
LEU
210
n
209
LEU
210
P
SER
211
n
210
SER
211
P
VAL
212
n
211
VAL
212
P
VAL
213
n
212
VAL
213
P
ARG
214
n
213
ARG
214
P
LEU
215
n
214
LEU
215
P
MET
216
n
215
MET
216
P
PHE
217
n
216
PHE
217
P
THR
218
n
217
THR
218
P
ALA
219
n
218
ALA
219
P
PHE
220
n
219
PHE
220
P
LEU
221
n
220
LEU
221
P
PRO
222
n
221
PRO
222
P
ASP
223
n
222
ASP
223
P
SER
224
n
223
SER
224
P
THR
225
n
224
THR
225
P
GLY
226
n
225
GLY
226
P
SER
227
n
226
SER
227
P
PHE
228
n
227
PHE
228
P
THR
229
n
228
THR
229
P
ARG
230
n
229
ARG
230
P
ARG
231
n
230
ARG
231
P
LEU
232
n
231
LEU
232
P
GLU
233
n
232
GLU
233
P
PRO
234
n
233
PRO
234
P
VAL
235
n
234
VAL
235
P
VAL
236
n
235
VAL
236
P
SER
237
n
236
SER
237
P
ASP
238
n
237
ASP
238
P
ALA
239
n
238
ALA
239
P
ILE
240
n
239
ILE
240
P
TYR
241
n
240
TYR
241
P
ASP
242
n
241
ASP
242
P
SER
243
n
242
SER
243
P
LYS
244
n
243
LYS
244
P
ALA
245
n
244
ALA
245
P
PRO
246
n
245
PRO
246
P
ASN
247
n
246
ASN
247
P
ALA
248
n
247
ALA
248
P
SER
249
n
248
SER
249
P
ASN
250
n
249
ASN
250
P
LEU
251
n
250
LEU
251
P
LYS
252
n
251
LYS
252
P
ILE
253
n
252
ILE
253
P
VAL
254
n
253
VAL
254
P
ARG
255
n
254
ARG
255
P
MET
256
n
255
MET
256
P
ASP
257
n
256
ASP
257
P
ARG
258
n
257
ARG
258
P
THR
259
n
258
THR
259
P
ALA
260
n
259
ALA
260
P
GLY
261
n
260
GLY
261
P
CYS
262
n
261
CYS
262
P
VAL
263
n
262
VAL
263
P
THR
264
n
263
THR
264
P
GLY
265
n
264
GLY
265
P
GLY
266
n
265
GLY
266
P
GLU
267
n
266
GLU
267
P
GLU
268
n
267
GLU
268
P
ILE
269
n
268
ILE
269
P
TYR
270
n
269
TYR
270
P
LEU
271
n
270
LEU
271
P
LEU
272
n
271
LEU
272
P
CYS
273
n
272
CYS
273
P
ASP
274
n
273
ASP
274
P
LYS
275
n
274
LYS
275
P
VAL
276
n
275
VAL
276
P
GLN
277
n
276
GLN
277
P
LYS
278
n
277
LYS
278
P
ASP
279
n
278
ASP
279
P
ASP
280
n
279
ASP
280
P
ILE
281
n
280
ILE
281
P
GLN
282
n
281
GLN
282
P
ILE
283
n
282
ILE
283
P
ARG
284
n
283
ARG
284
P
PHE
285
n
284
PHE
285
P
TYR
286
n
285
TYR
286
P
GLU
287
n
286
GLU
287
P
GLU
288
n
287
GLU
288
P
GLU
289
n
288
GLU
289
P
GLU
290
n
289
GLU
290
P
ASN
291
n
290
ASN
291
P
GLY
292
n
291
GLY
292
P
GLY
293
n
292
GLY
293
P
VAL
294
n
293
VAL
294
P
TRP
295
n
294
TRP
295
P
GLU
296
n
295
GLU
296
P
GLY
297
n
296
GLY
297
P
PHE
298
n
297
PHE
298
P
GLY
299
n
298
GLY
299
P
ASP
300
n
299
ASP
300
P
PHE
301
n
300
PHE
301
P
SER
302
n
301
SER
302
P
PRO
303
n
302
PRO
303
P
THR
304
n
303
THR
304
P
ASP
305
n
304
ASP
305
P
VAL
306
n
305
VAL
306
P
HIS
307
n
306
HIS
307
P
ARG
308
n
307
ARG
308
P
GLN
309
n
308
GLN
309
P
PHE
310
n
309
PHE
310
P
ALA
311
n
310
ALA
311
P
ILE
312
n
311
ILE
312
P
VAL
313
n
312
VAL
313
P
PHE
314
n
313
PHE
314
P
LYS
315
n
314
LYS
315
P
THR
316
n
315
THR
316
P
PRO
317
n
316
PRO
317
P
LYS
318
n
317
LYS
318
P
TYR
319
n
318
TYR
319
P
LYS
320
n
319
LYS
320
P
ASP
321
n
320
ASP
321
P
ILE
322
n
321
ILE
322
P
ASN
323
n
322
ASN
323
P
ILE
324
n
323
ILE
324
P
THR
325
n
324
THR
325
P
LYS
326
n
325
LYS
326
P
PRO
327
n
326
PRO
327
P
ALA
328
n
327
ALA
328
P
SER
329
n
328
SER
329
P
VAL
330
n
329
VAL
330
P
PHE
331
n
330
PHE
331
P
VAL
332
n
331
VAL
332
P
GLN
333
n
332
GLN
333
P
LEU
334
n
333
LEU
334
P
ARG
335
n
334
ARG
335
P
ARG
336
n
335
ARG
336
P
LYS
337
n
336
LYS
337
P
SER
338
n
337
SER
338
P
ASP
339
n
338
ASP
339
P
LEU
340
n
339
LEU
340
P
GLU
341
n
340
GLU
341
P
THR
342
n
341
THR
342
P
SER
343
n
342
SER
343
P
GLU
344
n
343
GLU
344
P
PRO
345
n
344
PRO
345
P
LYS
346
n
345
LYS
346
P
PRO
347
n
346
PRO
347
P
PHE
348
n
347
PHE
348
P
LEU
349
n
348
LEU
349
P
TYR
350
n
349
TYR
350
P
TYR
351
n
350
TYR
351
P
PRO
352
n
351
PRO
352
P
GLU
353
n
352
GLU
353
P
n
353
354
P
n
354
355
P
n
355
356
P
n
356
357
P
n
357
358
P
n
358
359
P
n
359
360
P
n
360
361
P
n
361
362
P
n
362
363
P
n
363
364
P
n
364
365
P
n
365
366
P
author_defined_assembly
4
tetrameric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
7_556
y,x,-z+1
crystal symmetry operation
0.0000000000
0.0000000000
57.0000000000
P
O
VAL
135
B
O
VAL
134
P
N
VAL
85
B
N
VAL
84
P
O
GLN
84
B
O
GLN
83
P
N
GLU
49
B
N
GLU
48
P
O
CYS
124
B
O
CYS
123
P
N
VAL
98
B
N
VAL
97
P
O
LYS
95
B
O
LYS
94
P
N
PHE
220
B
N
PHE
219
P
O
VAL
213
B
O
VAL
212
P
N
ILE
240
B
N
ILE
239
P
O
SER
113
B
O
SER
112
P
N
LEU
143
B
N
LEU
142
P
O
GLY
261
B
O
GLY
260
P
N
LEU
349
B
N
LEU
348
P
O
LYS
346
B
O
LYS
345
P
N
VAL
332
B
N
VAL
331
P
O
PHE
331
B
O
PHE
330
P
N
TYR
286
B
N
TYR
285
P
O
PHE
285
B
O
PHE
284
P
N
GLY
297
B
N
GLY
296
P
O
ILE
312
B
O
ILE
311
P
N
LEU
271
B
N
LEU
270
P
O
LEU
272
B
O
LEU
271
P
N
ARG
255
B
N
ARG
254
P
O
LEU
221
B
O
LEU
220
P
N
ARG
230
B
N
ARG
229
1
P
ALA
2
B
ALA
1
1
Y
1
P
GLU
3
B
GLU
2
1
Y
1
P
ASP
4
B
ASP
3
1
Y
1
P
ASP
5
B
ASP
4
1
Y
1
P
PRO
6
B
PRO
5
1
Y
1
P
TYR
7
B
TYR
6
1
Y
1
P
LEU
8
B
LEU
7
1
Y
1
P
GLY
9
B
GLY
8
1
Y
1
P
ARG
10
B
ARG
9
1
Y
1
P
PRO
11
B
PRO
10
1
Y
1
P
GLU
12
B
GLU
11
1
Y
1
P
GLN
13
B
GLN
12
1
Y
1
P
MET
14
B
MET
13
1
Y
1
P
PHE
15
B
PHE
14
1
Y
1
P
HIS
16
B
HIS
15
1
Y
1
P
LEU
17
B
LEU
16
1
Y
1
P
ASP
18
B
ASP
17
1
Y
1
P
PRO
19
B
PRO
18
1
Y
1
P
SER
20
B
SER
19
1
Y
1
P
LEU
21
B
LEU
20
1
Y
1
P
THR
22
B
THR
21
1
Y
1
P
HIS
23
B
HIS
22
1
Y
1
P
THR
24
B
THR
23
1
Y
1
P
ILE
25
B
ILE
24
1
Y
1
P
PHE
26
B
PHE
25
1
Y
1
P
ASN
27
B
ASN
26
1
Y
1
P
PRO
28
B
PRO
27
1
Y
1
P
GLU
29
B
GLU
28
1
Y
1
P
VAL
30
B
VAL
29
1
Y
1
P
PHE
31
B
PHE
30
1
Y
1
P
GLN
32
B
GLN
31
1
Y
1
P
PRO
33
B
PRO
32
1
Y
1
P
GLN
34
B
GLN
33
1
Y
1
P
MET
35
B
MET
34
1
Y
1
P
ALA
36
B
ALA
35
1
Y
1
P
LEU
37
B
LEU
36
1
Y
1
P
PRO
38
B
PRO
37
1
Y
1
P
THR
39
B
THR
38
1
Y
1
P
ALA
40
B
ALA
39
1
Y
1
P
ASP
41
B
ASP
40
1
Y
1
P
GLY
42
B
GLY
41
1
Y
1
P
ILE
354
B
ILE
353
1
Y
1
P
LYS
355
B
LYS
354
1
Y
1
P
ASP
356
B
ASP
355
1
Y
1
P
LYS
357
B
LYS
356
1
Y
1
P
GLU
358
B
GLU
357
1
Y
1
P
GLU
359
B
GLU
358
1
Y
1
P
VAL
360
B
VAL
359
1
Y
1
P
GLN
361
B
GLN
360
1
Y
1
P
ARG
362
B
ARG
361
1
Y
1
P
LYS
363
B
LYS
362
1
Y
1
P
ARG
364
B
ARG
363
1
Y
1
P
GLN
365
B
GLN
364
1
Y
1
P
LYS
366
B
LYS
365
1
Y
1
6.42
0.90
103.10
109.52
D
D
D
C4'
C3'
C2'
DA
DA
DA
1
1
1
N
1
4.88
0.50
106.80
111.68
D
D
D
O4'
C1'
C2'
DA
DA
DA
1
1
1
N
1
4.61
0.60
118.60
123.21
D
D
D
C6
N1
C2
DA
DA
DA
1
1
1
N
1
-4.36
0.50
129.30
124.94
D
D
D
N1
C2
N3
DA
DA
DA
1
1
1
N
1
6.94
0.90
103.10
110.04
D
D
D
C4'
C3'
C2'
DA
DA
DA
3
3
3
N
1
4.36
0.50
106.80
111.16
D
D
D
O4'
C1'
C2'
DA
DA
DA
3
3
3
N
1
4.64
0.60
118.60
123.24
D
D
D
C6
N1
C2
DA
DA
DA
3
3
3
N
1
-4.05
0.50
129.30
125.25
D
D
D
N1
C2
N3
DA
DA
DA
3
3
3
N
1
5.78
0.90
103.10
108.88
D
D
D
C4'
C3'
C2'
DT
DT
DT
4
4
4
N
1
3.34
0.50
106.80
110.14
D
D
D
O4'
C1'
C2'
DT
DT
DT
4
4
4
N
1
-4.34
0.60
127.20
122.86
D
D
D
C2
N3
C4
DT
DT
DT
4
4
4
N
1
4.25
0.50
106.80
111.05
D
D
D
O4'
C1'
C2'
DG
DG
DG
5
5
5
N
1
3.15
0.50
111.50
114.65
D
D
D
C5
C6
N1
DG
DG
DG
6
6
6
N
1
6.15
0.90
103.10
109.25
D
D
D
C4'
C3'
C2'
DG
DG
DG
7
7
7
N
1
3.46
0.50
106.80
110.26
D
D
D
O4'
C1'
C2'
DG
DG
DG
7
7
7
N
1
4.68
0.60
118.60
123.28
D
D
D
C6
N1
C2
DA
DA
DA
9
9
9
N
1
-4.15
0.50
129.30
125.15
D
D
D
N1
C2
N3
DA
DA
DA
9
9
9
N
1
-3.04
0.50
117.70
114.66
D
D
D
C5
C6
N1
DA
DA
DA
9
9
9
N
1
5.85
0.90
103.10
108.95
D
D
D
C4'
C3'
C2'
DA
DA
DA
10
10
10
N
1
3.64
0.50
106.80
110.44
D
D
D
O4'
C1'
C2'
DA
DA
DA
10
10
10
N
1
4.60
0.60
118.60
123.20
D
D
D
C6
N1
C2
DA
DA
DA
10
10
10
N
1
-4.12
0.50
129.30
125.18
D
D
D
N1
C2
N3
DA
DA
DA
10
10
10
N
1
-3.33
0.50
117.70
114.37
D
D
D
C5
C6
N1
DA
DA
DA
10
10
10
N
1
3.63
0.60
114.60
118.23
D
D
D
N1
C2
N3
DT
DT
DT
11
11
11
N
1
-4.32
0.60
127.20
122.88
D
D
D
C2
N3
C4
DT
DT
DT
11
11
11
N
1
7.42
1.20
119.70
127.12
D
D
D
C3'
O3'
P
DT
DT
DC
11
11
12
Y
1
5.55
0.90
103.10
108.65
D
D
D
C4'
C3'
C2'
DC
DC
DC
12
12
12
N
1
5.50
0.90
103.10
108.60
D
D
D
C4'
C3'
C2'
DC
DC
DC
13
13
13
N
1
-2.41
0.40
121.90
119.49
D
D
D
N3
C4
C5
DC
DC
DC
13
13
13
N
1
6.04
0.90
103.10
109.14
D
D
D
C4'
C3'
C2'
DC
DC
DC
15
15
15
N
1
3.76
0.50
106.80
110.56
D
D
D
O4'
C1'
C2'
DC
DC
DC
15
15
15
N
1
6.05
0.90
103.10
109.15
D
D
D
C4'
C3'
C2'
DT
DT
DT
16
16
16
N
1
3.61
0.50
106.80
110.41
D
D
D
O4'
C1'
C2'
DT
DT
DT
16
16
16
N
1
-4.33
0.60
127.20
122.87
D
D
D
C2
N3
C4
DT
DT
DT
16
16
16
N
1
5.93
0.90
103.10
109.03
D
D
D
C4'
C3'
C2'
DA
DA
DA
17
17
17
N
1
4.75
0.60
118.60
123.35
D
D
D
C6
N1
C2
DA
DA
DA
17
17
17
N
1
-4.26
0.50
129.30
125.04
D
D
D
N1
C2
N3
DA
DA
DA
17
17
17
N
1
3.15
0.50
111.50
114.65
D
D
D
C5
C6
N1
DG
DG
DG
18
18
18
N
1
-7.85
1.00
110.10
102.25
D
D
D
C1'
O4'
C4'
DA
DA
DA
19
19
19
N
1
-5.09
0.80
102.40
97.31
D
D
D
C3'
C2'
C1'
DA
DA
DA
19
19
19
N
1
6.56
0.30
108.30
114.86
D
D
D
O4'
C1'
N9
DA
DA
DA
19
19
19
N
1
4.63
0.60
118.60
123.23
D
D
D
C6
N1
C2
DA
DA
DA
19
19
19
N
1
-4.01
0.50
129.30
125.29
D
D
D
N1
C2
N3
DA
DA
DA
19
19
19
N
1
10.61
1.50
119.30
129.91
P
P
P
C
N
CA
TYR
PRO
PRO
351
352
352
Y
1
P
GLU
63
-55.30
-4.46
1
P
SER
66
-82.47
34.26
1
P
SER
81
24.93
110.05
1
P
ASN
89
82.67
48.26
1
P
TYR
90
3.74
110.60
1
P
PRO
93
-30.11
77.97
1
P
LYS
117
-43.99
-72.89
1
P
HIS
118
-99.74
58.22
1
P
ASP
132
-170.07
69.78
1
P
ASN
139
72.18
53.31
1
P
VAL
172
-122.36
-66.78
1
P
ASP
186
71.29
-44.83
1
P
MET
208
-28.81
117.74
1
P
ASP
223
-108.97
-85.49
1
P
THR
225
-46.37
108.53
1
P
LYS
278
-26.24
-45.76
1
P
ASP
280
-114.83
55.09
1
P
GLU
290
-27.67
-30.86
1
P
ARG
308
37.87
45.46
1
P
GLN
309
64.92
-5.78
1
P
VAL
330
-118.09
-169.07
1
P
SER
338
-42.01
-71.48
0.2860000
0.2250000
0.2250000
2.600
12.000
15648
92.000
1
2.000
2.600
12.000
63
2903
0
391
2449
2.600
12.000
1SVC
15658
1
refinement
X-PLOR
NFKB P50 HOMODIMER BOUND TO DNA
1
N
N
2
N
N
3
N
N
3
N
N
P
VAL
61
B
VAL
60
HELX_P
P
GLU
63
B
GLU
62
5
1
3
P
LYS
147
B
LYS
146
HELX_P
P
ARG
164
B
ARG
163
5
2
18
P
PRO
168
B
PRO
167
HELX_P
P
LEU
171
B
LEU
170
1
3
4
P
PRO
174
B
PRO
173
HELX_P
P
LEU
179
B
LEU
178
5
4
6
P
ASP
191
B
ASP
190
HELX_P
P
THR
205
B
THR
204
1
5
15
P
PRO
246
B
PRO
245
HELX_P
P
ALA
248
B
ALA
247
5
6
3
P
LYS
278
B
LYS
277
HELX_P
P
ASP
280
B
ASP
279
5
7
3
P
PRO
303
B
PRO
302
HELX_P
P
ASP
305
B
ASP
304
5
8
3
hydrog
WATSON-CRICK
D
DG
5
A
N1
DG
5
1_555
D
DC
15
A
N3
DC
15
7_556
hydrog
WATSON-CRICK
D
DG
5
A
N2
DG
5
1_555
D
DC
15
A
O2
DC
15
7_556
hydrog
WATSON-CRICK
D
DG
5
A
O6
DG
5
1_555
D
DC
15
A
N4
DC
15
7_556
hydrog
WATSON-CRICK
D
DG
6
A
N1
DG
6
1_555
D
DC
14
A
N3
DC
14
7_556
hydrog
WATSON-CRICK
D
DG
6
A
N2
DG
6
1_555
D
DC
14
A
O2
DC
14
7_556
hydrog
WATSON-CRICK
D
DG
6
A
O6
DG
6
1_555
D
DC
14
A
N4
DC
14
7_556
hydrog
WATSON-CRICK
D
DG
7
A
N1
DG
7
1_555
D
DC
13
A
N3
DC
13
7_556
hydrog
WATSON-CRICK
D
DG
7
A
N2
DG
7
1_555
D
DC
13
A
O2
DC
13
7_556
hydrog
WATSON-CRICK
D
DG
7
A
O6
DG
7
1_555
D
DC
13
A
N4
DC
13
7_556
hydrog
WATSON-CRICK
D
DG
8
A
N1
DG
8
1_555
D
DC
12
A
N3
DC
12
7_556
hydrog
WATSON-CRICK
D
DG
8
A
N2
DG
8
1_555
D
DC
12
A
O2
DC
12
7_556
hydrog
WATSON-CRICK
D
DG
8
A
O6
DG
8
1_555
D
DC
12
A
N4
DC
12
7_556
hydrog
WATSON-CRICK
D
DA
9
A
N1
DA
9
1_555
D
DT
11
A
N3
DT
11
7_556
hydrog
WATSON-CRICK
D
DA
9
A
N6
DA
9
1_555
D
DT
11
A
O4
DT
11
7_556
hydrog
WATSON-CRICK
D
DT
11
A
N3
DT
11
1_555
D
DA
9
A
N1
DA
9
7_556
hydrog
WATSON-CRICK
D
DT
11
A
O4
DT
11
1_555
D
DA
9
A
N6
DA
9
7_556
hydrog
WATSON-CRICK
D
DC
12
A
N3
DC
12
1_555
D
DG
8
A
N1
DG
8
7_556
hydrog
WATSON-CRICK
D
DC
12
A
N4
DC
12
1_555
D
DG
8
A
O6
DG
8
7_556
hydrog
WATSON-CRICK
D
DC
12
A
O2
DC
12
1_555
D
DG
8
A
N2
DG
8
7_556
hydrog
WATSON-CRICK
D
DC
13
A
N3
DC
13
1_555
D
DG
7
A
N1
DG
7
7_556
hydrog
WATSON-CRICK
D
DC
13
A
N4
DC
13
1_555
D
DG
7
A
O6
DG
7
7_556
hydrog
WATSON-CRICK
D
DC
13
A
O2
DC
13
1_555
D
DG
7
A
N2
DG
7
7_556
hydrog
WATSON-CRICK
D
DC
14
A
N3
DC
14
1_555
D
DG
6
A
N1
DG
6
7_556
hydrog
WATSON-CRICK
D
DC
14
A
N4
DC
14
1_555
D
DG
6
A
O6
DG
6
7_556
hydrog
WATSON-CRICK
D
DC
14
A
O2
DC
14
1_555
D
DG
6
A
N2
DG
6
7_556
hydrog
WATSON-CRICK
D
DC
15
A
N3
DC
15
1_555
D
DG
5
A
N1
DG
5
7_556
hydrog
WATSON-CRICK
D
DC
15
A
N4
DC
15
1_555
D
DG
5
A
O6
DG
5
7_556
hydrog
WATSON-CRICK
D
DC
15
A
O2
DC
15
1_555
D
DG
5
A
N2
DG
5
7_556
TRANSCRIPTION/DNA
DNA-BINDING, TRANSCRIPTION REGULATION, ACTIVATOR, NUCLEAR PROTEIN, PHOSPHORYLATION, DNA, TRANSCRIPTION-DNA COMPLEX
NFKB1_HUMAN
UNP
2
P19838
1SVC
PDB
1
1SVC
2
366
1SVC
2
366
P19838
P
1
1
365
1
19
1SVC
1
19
1SVC
D
2
1
19
1
CYS
engineered mutation
ALA
62
1SVC
P
P19838
UNP
62
61
3
4
2
5
3
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
P
VAL
134
B
VAL
133
P
GLY
136
B
GLY
135
P
GLN
84
B
GLN
83
P
CYS
88
B
CYS
87
P
TYR
44
B
TYR
43
P
GLU
49
B
GLU
48
P
CYS
124
B
CYS
123
P
THR
127
B
THR
126
P
LYS
95
B
LYS
94
P
VAL
101
B
VAL
100
P
VAL
212
B
VAL
211
P
PHE
220
B
PHE
219
P
ALA
239
B
ALA
238
P
TYR
241
B
TYR
240
P
SER
113
B
SER
112
P
GLY
116
B
GLY
115
P
LEU
140
B
LEU
139
P
LEU
143
B
LEU
142
P
ALA
260
B
ALA
259
P
CYS
262
B
CYS
261
P
LYS
346
B
LYS
345
P
TYR
351
B
TYR
350
P
ALA
328
B
ALA
327
P
ARG
335
B
ARG
334
P
GLN
282
B
GLN
281
P
GLU
289
B
GLU
288
P
GLY
293
B
GLY
292
P
PHE
298
B
PHE
297
P
ALA
311
B
ALA
310
P
LYS
315
B
LYS
314
P
GLU
268
B
GLU
267
P
CYS
273
B
CYS
272
P
ILE
253
B
ILE
252
P
MET
256
B
MET
255
P
PHE
220
B
PHE
219
P
PRO
222
B
PRO
221
P
PHE
228
B
PHE
227
P
ARG
231
B
ARG
230
92
P 41 21 2