0.012325
0.000000
0.000000
0.000000
0.011478
0.000000
0.000000
0.000000
0.010845
0.00000
0.00000
0.00000
Cameron, A.
Read, J.
Tranter, R.
Winter, V.J.
Sessions, R.B.
Brady, R.L.
Vivas, L.
Easton, A.
Kendrick, H.
Croft, S.L.
Barros, D.
Lavandera, J.L.
Martin, J.J.
Risco, F.
Garcia-Ochoa, S.
Gamo, F.J.
Sanz, L.
Leon, L.
Ruiz, J.R.
Gabarro, R.
Mallo, A.
De Las Heras, F.G.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
81.136
87.124
92.212
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C21 H29 N7 O14 P2
665.441
1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE
NADH
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
C
N
138
N
O
N
139
N
C
N
140
N
O
N
141
N
C
N
142
N
O
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
N
N
152
S
C
N
153
N
C
N
154
N
O
N
155
N
C
Y
156
N
C
Y
157
N
N
Y
158
N
C
Y
159
N
C
Y
160
N
N
N
161
N
O
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
O
N
173
N
H
N
174
N
H
N
175
N
N
N
176
S
C
N
177
N
C
N
178
N
O
N
179
S
C
N
180
N
C
N
181
N
C
N
182
N
C
N
183
N
O
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
N
N
198
S
C
N
199
N
C
N
200
N
O
N
201
N
C
N
202
N
C
N
203
N
C
N
204
N
C
N
205
N
O
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
N
N
220
S
C
N
221
N
C
N
222
N
O
N
223
N
C
N
224
N
C
N
225
N
C
N
226
N
C
N
227
N
N
N
228
N
O
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
N
N
245
S
C
N
246
N
C
N
247
N
O
N
248
N
C
N
249
N
C
N
250
N
S
N
251
N
C
N
252
N
O
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
S
P
N
265
N
O
N
266
N
O
N
267
N
O
N
268
N
C
N
269
R
C
N
270
N
O
N
271
S
C
N
272
N
O
N
273
R
C
N
274
N
O
N
275
R
C
Y
276
N
N
Y
277
N
C
Y
278
N
N
Y
279
N
C
Y
280
N
C
N
281
N
N
Y
282
N
N
Y
283
N
C
Y
284
N
N
Y
285
N
C
N
286
N
O
N
287
S
P
N
288
N
O
N
289
N
O
N
290
N
O
N
291
N
C
N
292
R
C
N
293
N
O
N
294
S
C
N
295
N
O
N
296
R
C
N
297
N
O
N
298
R
C
N
299
N
N
N
300
N
C
N
301
N
C
N
302
N
C
N
303
N
O
N
304
N
N
N
305
N
C
N
306
N
C
N
307
N
C
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
N
N
338
S
C
N
339
N
C
N
340
N
O
N
341
N
C
Y
342
N
C
Y
343
N
C
Y
344
N
C
Y
345
N
C
Y
346
N
C
Y
347
N
C
N
348
N
O
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
N
N
361
S
C
N
362
N
C
N
363
N
O
N
364
N
C
N
365
N
C
N
366
N
C
N
367
N
O
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
N
N
378
S
C
N
379
N
C
N
380
N
O
N
381
N
C
N
382
N
O
N
383
N
O
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
N
N
392
S
C
N
393
N
C
N
394
N
O
N
395
R
C
N
396
N
O
N
397
N
C
N
398
N
O
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
N
N
409
S
C
N
410
N
C
N
411
N
O
N
412
N
C
Y
413
N
C
Y
414
N
C
Y
415
N
C
Y
416
N
N
Y
417
N
C
Y
418
N
C
Y
419
N
C
Y
420
N
C
Y
421
N
C
N
422
N
O
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
N
N
436
S
C
N
437
N
C
N
438
N
O
N
439
N
C
Y
440
N
C
Y
441
N
C
Y
442
N
C
Y
443
N
C
Y
444
N
C
Y
445
N
C
N
446
N
O
N
447
N
O
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
N
N
460
S
C
N
461
N
C
N
462
N
O
N
463
N
C
N
464
N
C
N
465
N
C
N
466
N
O
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
H
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
Y
153
N
sing
Y
154
N
doub
Y
155
N
doub
N
156
N
sing
Y
157
N
sing
N
158
N
sing
Y
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
doub
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
doub
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
doub
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
doub
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
Y
273
N
sing
Y
274
N
sing
Y
275
N
doub
N
276
N
sing
Y
277
N
sing
Y
278
N
sing
Y
279
N
doub
N
280
N
sing
Y
281
N
doub
N
282
N
sing
N
283
N
sing
Y
284
N
sing
Y
285
N
doub
N
286
N
sing
Y
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
doub
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
doub
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
doub
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
doub
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
doub
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
Y
338
N
doub
Y
339
N
sing
Y
340
N
sing
N
341
N
sing
Y
342
N
doub
N
343
N
sing
Y
344
N
doub
N
345
N
sing
Y
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
doub
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
doub
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
doub
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
doub
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
Y
407
N
doub
Y
408
N
sing
Y
409
N
sing
N
410
N
sing
Y
411
N
doub
Y
412
N
sing
Y
413
N
sing
N
414
N
sing
Y
415
N
sing
Y
416
N
doub
N
417
N
sing
Y
418
N
doub
N
419
N
sing
Y
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
doub
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
Y
435
N
doub
Y
436
N
sing
Y
437
N
sing
N
438
N
sing
Y
439
N
doub
N
440
N
sing
Y
441
N
doub
N
442
N
sing
Y
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
doub
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
279
31429
31439
10.1074/jbc.M402433200
15117937
Identification and Activity of a Series of Azole-based Compounds with Lactate Dehydrogenase-directed Anti-malarial Activity.
2004
10.2210/pdb1t2c/pdb
pdb_00001t2c
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2001-01-01
ADSC QUANTUM 4
SINGLE WAVELENGTH
M
x-ray
1
1.488
1.0
PX14.1
SRS
1.488
SYNCHROTRON
SRS BEAMLINE PX14.1
34977.586
L-lactate dehydrogenase
1.1.1.27
1
man
polymer
665.441
1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE
1
syn
non-polymer
92.094
GLYCEROL
1
syn
non-polymer
18.015
water
225
nat
water
LDH-P
no
no
MAPKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAGADVVIVTA
GFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVMVQLLHQHSGVPKNKIIGLGGVLDTSRLK
YYISQKLNVCPRDVNAHIVGAHGNKMVLLKRYITVGGIPLQEFINNKLISDAELEAIFDRTVNTALEIVNLHASPYVAPA
AAIIEMAESYLKDLKKVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIELQLNSEEKAKFDEAIAETKRMKALAHHHH
HH
MAPKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAGADVVIVTA
GFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVMVQLLHQHSGVPKNKIIGLGGVLDTSRLK
YYISQKLNVCPRDVNAHIVGAHGNKMVLLKRYITVGGIPLQEFINNKLISDAELEAIFDRTVNTALEIVNLHASPYVAPA
AAIIEMAESYLKDLKKVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIELQLNSEEKAKFDEAIAETKRMKALAHHHH
HH
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
malaria parasite P. falciparum
Plasmodium
Escherichia
sample
LDH
5833
Plasmodium falciparum
562
Escherichia coli
JM109
plasmid
pKK223
1
2.3
40
VAPOR DIFFUSION, HANGING DROP
7.5
MPD, Hepes, Imidazole, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K
291
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Derived calculations
Version format compliance
Data collection
Database references
Derived calculations
Refinement description
1
0
2004-05-11
1
1
2008-04-30
1
2
2011-07-13
1
3
2023-08-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
pfLDH with NADH and oxamate
pfLDH with NAD+ and 4-hydroxy-1,2,5-oxadiazole-3-carboxylic acid
pfLDH with NADH and 3-hydroxyisoxazole-4-carboxylic acid
pfLDH with NADH and 4-hydroxy-1,2,5-thiadiazole-3-carboxylic acid
pfLDH with NADH and oxamate
humanLDH with NAD+ and 4-hydroxy-1,2,5-oxadiazole-3-carboxylic acid
RCSB
Y
RCSB
2004-04-21
REL
REL
NAI
1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE
GOL
GLYCEROL
HOH
water
1LDG
PDB
experimental model
NAD
316
2
NAI
NAI
336
A
GOL
1
3
GOL
GOL
337
A
HOH
1
4
HOH
HOH
338
A
HOH
2
4
HOH
HOH
339
A
HOH
3
4
HOH
HOH
340
A
HOH
4
4
HOH
HOH
341
A
HOH
5
4
HOH
HOH
342
A
HOH
6
4
HOH
HOH
343
A
HOH
7
4
HOH
HOH
344
A
HOH
8
4
HOH
HOH
345
A
HOH
9
4
HOH
HOH
346
A
HOH
10
4
HOH
HOH
347
A
HOH
11
4
HOH
HOH
348
A
HOH
12
4
HOH
HOH
349
A
HOH
13
4
HOH
HOH
350
A
HOH
14
4
HOH
HOH
351
A
HOH
15
4
HOH
HOH
352
A
HOH
16
4
HOH
HOH
353
A
HOH
17
4
HOH
HOH
354
A
HOH
18
4
HOH
HOH
355
A
HOH
19
4
HOH
HOH
356
A
HOH
20
4
HOH
HOH
357
A
HOH
21
4
HOH
HOH
358
A
HOH
22
4
HOH
HOH
359
A
HOH
23
4
HOH
HOH
360
A
HOH
24
4
HOH
HOH
361
A
HOH
25
4
HOH
HOH
362
A
HOH
26
4
HOH
HOH
363
A
HOH
27
4
HOH
HOH
364
A
HOH
28
4
HOH
HOH
365
A
HOH
29
4
HOH
HOH
366
A
HOH
30
4
HOH
HOH
367
A
HOH
31
4
HOH
HOH
368
A
HOH
32
4
HOH
HOH
369
A
HOH
33
4
HOH
HOH
370
A
HOH
34
4
HOH
HOH
371
A
HOH
35
4
HOH
HOH
372
A
HOH
36
4
HOH
HOH
373
A
HOH
37
4
HOH
HOH
374
A
HOH
38
4
HOH
HOH
375
A
HOH
39
4
HOH
HOH
376
A
HOH
40
4
HOH
HOH
377
A
HOH
41
4
HOH
HOH
378
A
HOH
42
4
HOH
HOH
379
A
HOH
43
4
HOH
HOH
380
A
HOH
44
4
HOH
HOH
381
A
HOH
45
4
HOH
HOH
382
A
HOH
46
4
HOH
HOH
383
A
HOH
47
4
HOH
HOH
384
A
HOH
48
4
HOH
HOH
385
A
HOH
49
4
HOH
HOH
386
A
HOH
50
4
HOH
HOH
387
A
HOH
51
4
HOH
HOH
388
A
HOH
52
4
HOH
HOH
389
A
HOH
53
4
HOH
HOH
390
A
HOH
54
4
HOH
HOH
391
A
HOH
55
4
HOH
HOH
392
A
HOH
56
4
HOH
HOH
393
A
HOH
57
4
HOH
HOH
394
A
HOH
58
4
HOH
HOH
395
A
HOH
59
4
HOH
HOH
396
A
HOH
60
4
HOH
HOH
397
A
HOH
61
4
HOH
HOH
398
A
HOH
62
4
HOH
HOH
399
A
HOH
63
4
HOH
HOH
400
A
HOH
64
4
HOH
HOH
401
A
HOH
65
4
HOH
HOH
402
A
HOH
66
4
HOH
HOH
403
A
HOH
67
4
HOH
HOH
404
A
HOH
68
4
HOH
HOH
405
A
HOH
69
4
HOH
HOH
406
A
HOH
70
4
HOH
HOH
407
A
HOH
71
4
HOH
HOH
408
A
HOH
72
4
HOH
HOH
409
A
HOH
73
4
HOH
HOH
410
A
HOH
74
4
HOH
HOH
411
A
HOH
75
4
HOH
HOH
412
A
HOH
76
4
HOH
HOH
413
A
HOH
77
4
HOH
HOH
414
A
HOH
78
4
HOH
HOH
415
A
HOH
79
4
HOH
HOH
416
A
HOH
80
4
HOH
HOH
417
A
HOH
81
4
HOH
HOH
418
A
HOH
82
4
HOH
HOH
419
A
HOH
83
4
HOH
HOH
420
A
HOH
84
4
HOH
HOH
421
A
HOH
85
4
HOH
HOH
422
A
HOH
86
4
HOH
HOH
423
A
HOH
87
4
HOH
HOH
424
A
HOH
88
4
HOH
HOH
425
A
HOH
89
4
HOH
HOH
426
A
HOH
90
4
HOH
HOH
427
A
HOH
91
4
HOH
HOH
428
A
HOH
92
4
HOH
HOH
429
A
HOH
93
4
HOH
HOH
430
A
HOH
94
4
HOH
HOH
431
A
HOH
95
4
HOH
HOH
432
A
HOH
96
4
HOH
HOH
433
A
HOH
97
4
HOH
HOH
434
A
HOH
98
4
HOH
HOH
435
A
HOH
99
4
HOH
HOH
436
A
HOH
100
4
HOH
HOH
437
A
HOH
101
4
HOH
HOH
438
A
HOH
102
4
HOH
HOH
439
A
HOH
103
4
HOH
HOH
440
A
HOH
104
4
HOH
HOH
441
A
HOH
105
4
HOH
HOH
442
A
HOH
106
4
HOH
HOH
443
A
HOH
107
4
HOH
HOH
444
A
HOH
108
4
HOH
HOH
445
A
HOH
109
4
HOH
HOH
446
A
HOH
110
4
HOH
HOH
447
A
HOH
111
4
HOH
HOH
448
A
HOH
112
4
HOH
HOH
449
A
HOH
113
4
HOH
HOH
450
A
HOH
114
4
HOH
HOH
451
A
HOH
115
4
HOH
HOH
452
A
HOH
116
4
HOH
HOH
453
A
HOH
117
4
HOH
HOH
454
A
HOH
118
4
HOH
HOH
455
A
HOH
119
4
HOH
HOH
456
A
HOH
120
4
HOH
HOH
457
A
HOH
121
4
HOH
HOH
458
A
HOH
122
4
HOH
HOH
459
A
HOH
123
4
HOH
HOH
460
A
HOH
124
4
HOH
HOH
461
A
HOH
125
4
HOH
HOH
462
A
HOH
126
4
HOH
HOH
463
A
HOH
127
4
HOH
HOH
464
A
HOH
128
4
HOH
HOH
465
A
HOH
129
4
HOH
HOH
466
A
HOH
130
4
HOH
HOH
467
A
HOH
131
4
HOH
HOH
468
A
HOH
132
4
HOH
HOH
469
A
HOH
133
4
HOH
HOH
470
A
HOH
134
4
HOH
HOH
471
A
HOH
135
4
HOH
HOH
472
A
HOH
136
4
HOH
HOH
473
A
HOH
137
4
HOH
HOH
474
A
HOH
138
4
HOH
HOH
475
A
HOH
139
4
HOH
HOH
476
A
HOH
140
4
HOH
HOH
477
A
HOH
141
4
HOH
HOH
478
A
HOH
142
4
HOH
HOH
479
A
HOH
143
4
HOH
HOH
480
A
HOH
144
4
HOH
HOH
481
A
HOH
145
4
HOH
HOH
482
A
HOH
146
4
HOH
HOH
483
A
HOH
147
4
HOH
HOH
484
A
HOH
148
4
HOH
HOH
485
A
HOH
149
4
HOH
HOH
486
A
HOH
150
4
HOH
HOH
487
A
HOH
151
4
HOH
HOH
488
A
HOH
152
4
HOH
HOH
489
A
HOH
153
4
HOH
HOH
490
A
HOH
154
4
HOH
HOH
491
A
HOH
155
4
HOH
HOH
492
A
HOH
156
4
HOH
HOH
493
A
HOH
157
4
HOH
HOH
494
A
HOH
158
4
HOH
HOH
495
A
HOH
159
4
HOH
HOH
496
A
HOH
160
4
HOH
HOH
497
A
HOH
161
4
HOH
HOH
498
A
HOH
162
4
HOH
HOH
499
A
HOH
163
4
HOH
HOH
500
A
HOH
164
4
HOH
HOH
501
A
HOH
165
4
HOH
HOH
502
A
HOH
166
4
HOH
HOH
503
A
HOH
167
4
HOH
HOH
504
A
HOH
168
4
HOH
HOH
505
A
HOH
169
4
HOH
HOH
506
A
HOH
170
4
HOH
HOH
507
A
HOH
171
4
HOH
HOH
508
A
HOH
172
4
HOH
HOH
509
A
HOH
173
4
HOH
HOH
510
A
HOH
174
4
HOH
HOH
511
A
HOH
175
4
HOH
HOH
512
A
HOH
176
4
HOH
HOH
513
A
HOH
177
4
HOH
HOH
514
A
HOH
178
4
HOH
HOH
515
A
HOH
179
4
HOH
HOH
516
A
HOH
180
4
HOH
HOH
517
A
HOH
181
4
HOH
HOH
518
A
HOH
182
4
HOH
HOH
519
A
HOH
183
4
HOH
HOH
520
A
HOH
184
4
HOH
HOH
521
A
HOH
185
4
HOH
HOH
522
A
HOH
186
4
HOH
HOH
523
A
HOH
187
4
HOH
HOH
524
A
HOH
188
4
HOH
HOH
525
A
HOH
189
4
HOH
HOH
526
A
HOH
190
4
HOH
HOH
527
A
HOH
191
4
HOH
HOH
528
A
HOH
192
4
HOH
HOH
529
A
HOH
193
4
HOH
HOH
530
A
HOH
194
4
HOH
HOH
531
A
HOH
195
4
HOH
HOH
532
A
HOH
196
4
HOH
HOH
533
A
HOH
197
4
HOH
HOH
534
A
HOH
198
4
HOH
HOH
535
A
HOH
199
4
HOH
HOH
536
A
HOH
200
4
HOH
HOH
537
A
HOH
201
4
HOH
HOH
538
A
HOH
202
4
HOH
HOH
539
A
HOH
203
4
HOH
HOH
540
A
HOH
204
4
HOH
HOH
541
A
HOH
205
4
HOH
HOH
542
A
HOH
206
4
HOH
HOH
543
A
HOH
207
4
HOH
HOH
544
A
HOH
208
4
HOH
HOH
545
A
HOH
209
4
HOH
HOH
546
A
HOH
210
4
HOH
HOH
547
A
HOH
211
4
HOH
HOH
548
A
HOH
212
4
HOH
HOH
549
A
HOH
213
4
HOH
HOH
550
A
HOH
214
4
HOH
HOH
551
A
HOH
215
4
HOH
HOH
552
A
HOH
216
4
HOH
HOH
553
A
HOH
217
4
HOH
HOH
554
A
HOH
218
4
HOH
HOH
555
A
HOH
219
4
HOH
HOH
556
A
HOH
220
4
HOH
HOH
557
A
HOH
221
4
HOH
HOH
558
A
HOH
222
4
HOH
HOH
559
A
HOH
223
4
HOH
HOH
560
A
HOH
224
4
HOH
HOH
561
A
HOH
225
4
HOH
HOH
562
A
n
1
17
A
ALA
18
n
2
ALA
18
A
PRO
19
n
3
PRO
19
A
LYS
20
n
4
LYS
20
A
ALA
21
n
5
ALA
21
A
LYS
22
n
6
LYS
22
A
ILE
23
n
7
ILE
23
A
VAL
24
n
8
VAL
24
A
LEU
25
n
9
LEU
25
A
VAL
26
n
10
VAL
26
A
GLY
27
n
11
GLY
27
A
SER
28
n
12
SER
28
A
GLY
29
n
13
GLY
29
A
MET
30
n
14
MET
30
A
ILE
31
n
15
ILE
31
A
GLY
32
n
16
GLY
32
A
GLY
33
n
17
GLY
33
A
VAL
35
n
18
VAL
35
A
MET
36
n
19
MET
36
A
ALA
37
n
20
ALA
37
A
THR
38
n
21
THR
38
A
LEU
39
n
22
LEU
39
A
ILE
40
n
23
ILE
40
A
VAL
41
n
24
VAL
41
A
GLN
42
n
25
GLN
42
A
LYS
43
n
26
LYS
43
A
ASN
44
n
27
ASN
44
A
LEU
45
n
28
LEU
45
A
GLY
46
n
29
GLY
46
A
ASP
47
n
30
ASP
47
A
VAL
49
n
31
VAL
49
A
VAL
50
n
32
VAL
50
A
LEU
51
n
33
LEU
51
A
PHE
52
n
34
PHE
52
A
ASP
53
n
35
ASP
53
A
ILE
54
n
36
ILE
54
A
VAL
55
n
37
VAL
55
A
LYS
56
n
38
LYS
56
A
ASN
57
n
39
ASN
57
A
MET
58
n
40
MET
58
A
PRO
59
n
41
PRO
59
A
HIS
60
n
42
HIS
60
A
GLY
61
n
43
GLY
61
A
LYS
62
n
44
LYS
62
A
ALA
63
n
45
ALA
63
A
LEU
64
n
46
LEU
64
A
ASP
65
n
47
ASP
65
A
THR
66
n
48
THR
66
A
SER
67
n
49
SER
67
A
HIS
68
n
50
HIS
68
A
THR
69
n
51
THR
69
A
ASN
70
n
52
ASN
70
A
VAL
71
n
53
VAL
71
A
MET
72
n
54
MET
72
A
ALA
73
n
55
A
ALA
73
A
TYR
73
n
56
B
TYR
73
A
SER
74
n
57
SER
74
A
ASN
75
n
58
ASN
75
A
CYS
76
n
59
CYS
76
A
LYS
77
n
60
LYS
77
A
VAL
78
n
61
VAL
78
A
SER
79
n
62
SER
79
A
GLY
80
n
63
GLY
80
A
SER
81
n
64
SER
81
A
ASN
83
n
65
ASN
83
A
THR
84
n
66
THR
84
A
TYR
85
n
67
TYR
85
A
ASP
86
n
68
ASP
86
A
ASP
87
n
69
ASP
87
A
LEU
88
n
70
LEU
88
A
ALA
89
n
71
ALA
89
A
GLY
90
n
72
GLY
90
A
ALA
91
n
73
ALA
91
A
ASP
92
n
74
ASP
92
A
VAL
93
n
75
VAL
93
A
VAL
94
n
76
VAL
94
A
ILE
95
n
77
ILE
95
A
VAL
96
n
78
VAL
96
A
THR
97
n
79
THR
97
A
ALA
98
n
80
ALA
98
A
GLY
99
n
81
GLY
99
A
PHE
100
n
82
PHE
100
A
THR
101
n
83
THR
101
A
LYS
102
n
84
LYS
102
A
ALA
103
n
85
A
ALA
103
A
PRO
103
n
86
B
PRO
103
A
GLY
103
n
87
C
GLY
103
A
LYS
103
n
88
D
LYS
103
A
SER
103
n
89
E
SER
103
A
ASP
105
n
90
A
ASP
105
A
LYS
105
n
91
B
LYS
105
A
GLU
106
n
92
GLU
106
A
TRP
107
n
93
TRP
107
A
ASN
108
n
94
ASN
108
A
ARG
109
n
95
ARG
109
A
ASP
110
n
96
ASP
110
A
ASP
111
n
97
ASP
111
A
LEU
112
n
98
LEU
112
A
LEU
113
n
99
LEU
113
A
PRO
114
n
100
PRO
114
A
LEU
115
n
101
LEU
115
A
ASN
116
n
102
ASN
116
A
ASN
117
n
103
ASN
117
A
LYS
118
n
104
LYS
118
A
ILE
119
n
105
ILE
119
A
MET
120
n
106
MET
120
A
ILE
121
n
107
ILE
121
A
GLU
122
n
108
GLU
122
A
ILE
123
n
109
ILE
123
A
GLY
124
n
110
GLY
124
A
GLY
125
n
111
GLY
125
A
HIS
126
n
112
HIS
126
A
ILE
127
n
113
ILE
127
A
LYS
128
n
114
LYS
128
A
LYS
129
n
115
LYS
129
A
ASN
130
n
116
ASN
130
A
CYS
131
n
117
CYS
131
A
PRO
132
n
118
A
PRO
132
A
ASN
132
n
119
B
ASN
132
A
ALA
133
n
120
ALA
133
A
PHE
134
n
121
PHE
134
A
ILE
135
n
122
ILE
135
A
ILE
136
n
123
ILE
136
A
VAL
137
n
124
VAL
137
A
VAL
138
n
125
VAL
138
A
THR
139
n
126
THR
139
A
ASN
140
n
127
ASN
140
A
PRO
141
n
128
PRO
141
A
VAL
142
n
129
VAL
142
A
ASP
143
n
130
ASP
143
A
VAL
144
n
131
VAL
144
A
MET
145
n
132
MET
145
A
VAL
146
n
133
VAL
146
A
GLN
147
n
134
GLN
147
A
LEU
148
n
135
LEU
148
A
LEU
149
n
136
LEU
149
A
HIS
150
n
137
HIS
150
A
GLN
151
n
138
GLN
151
A
HIS
152
n
139
HIS
152
A
SER
153
n
140
SER
153
A
GLY
154
n
141
GLY
154
A
VAL
155
n
142
VAL
155
A
PRO
156
n
143
PRO
156
A
LYS
157
n
144
LYS
157
A
ASN
158
n
145
ASN
158
A
LYS
159
n
146
LYS
159
A
ILE
160
n
147
ILE
160
A
ILE
161
n
148
ILE
161
A
GLY
162
n
149
GLY
162
A
LEU
163
n
150
LEU
163
A
GLY
164
n
151
GLY
164
A
GLY
165
n
152
GLY
165
A
VAL
166
n
153
VAL
166
A
LEU
167
n
154
LEU
167
A
ASP
168
n
155
ASP
168
A
THR
169
n
156
THR
169
A
SER
170
n
157
SER
170
A
ARG
171
n
158
ARG
171
A
LEU
172
n
159
LEU
172
A
LYS
173
n
160
LYS
173
A
TYR
174
n
161
TYR
174
A
TYR
175
n
162
TYR
175
A
ILE
176
n
163
ILE
176
A
SER
177
n
164
SER
177
A
GLN
178
n
165
GLN
178
A
LYS
179
n
166
LYS
179
A
LEU
180
n
167
LEU
180
A
ASN
181
n
168
ASN
181
A
VAL
182
n
169
VAL
182
A
CYS
183
n
170
CYS
183
A
PRO
184
n
171
PRO
184
A
ARG
185
n
172
ARG
185
A
ASP
186
n
173
ASP
186
A
VAL
187
n
174
VAL
187
A
ASN
188
n
175
ASN
188
A
ALA
189
n
176
ALA
189
A
HIS
190
n
177
HIS
190
A
ILE
191
n
178
ILE
191
A
VAL
192
n
179
VAL
192
A
GLY
193
n
180
GLY
193
A
ALA
194
n
181
ALA
194
A
HIS
195
n
182
HIS
195
A
GLY
196
n
183
GLY
196
A
ASN
197
n
184
ASN
197
A
LYS
198
n
185
LYS
198
A
MET
199
n
186
MET
199
A
VAL
200
n
187
VAL
200
A
LEU
201
n
188
LEU
201
A
LEU
202
n
189
LEU
202
A
LYS
203
n
190
LYS
203
A
ARG
204
n
191
ARG
204
A
TYR
205
n
192
TYR
205
A
ILE
206
n
193
ILE
206
A
THR
207
n
194
THR
207
A
VAL
208
n
195
VAL
208
A
GLY
209
n
196
A
GLY
209
A
GLY
209
n
197
B
GLY
209
A
ILE
209
n
198
C
ILE
209
A
PRO
209
n
199
D
PRO
209
A
LEU
210
n
200
A
LEU
210
A
GLN
210
n
201
B
GLN
210
A
GLU
211
n
202
GLU
211
A
PHE
212
n
203
PHE
212
A
ILE
213
n
204
ILE
213
A
ASN
214
n
205
ASN
214
A
ASN
215
n
206
ASN
215
A
LYS
216
n
207
LYS
216
A
LEU
218
n
208
LEU
218
A
ILE
219
n
209
ILE
219
A
SER
220
n
210
SER
220
A
ASP
221
n
211
ASP
221
A
ALA
222
n
212
ALA
222
A
GLU
223
n
213
GLU
223
A
LEU
225
n
214
LEU
225
A
GLU
226
n
215
GLU
226
A
ALA
227
n
216
ALA
227
A
ILE
228
n
217
ILE
228
A
PHE
229
n
218
PHE
229
A
ASP
230
n
219
ASP
230
A
ARG
231
n
220
ARG
231
A
THR
232
n
221
THR
232
A
VAL
233
n
222
VAL
233
A
ASN
234
n
223
ASN
234
A
THR
235
n
224
THR
235
A
ALA
236
n
225
ALA
236
A
LEU
237
n
226
LEU
237
A
GLU
238
n
227
GLU
238
A
ILE
239
n
228
ILE
239
A
VAL
240
n
229
VAL
240
A
ASN
241
n
230
ASN
241
A
LEU
242
n
231
LEU
242
A
HIS
243
n
232
HIS
243
A
ALA
244
n
233
ALA
244
A
SER
245
n
234
SER
245
A
PRO
246
n
235
PRO
246
A
TYR
247
n
236
TYR
247
A
VAL
248
n
237
VAL
248
A
ALA
249
n
238
ALA
249
A
PRO
250
n
239
PRO
250
A
ALA
251
n
240
ALA
251
A
ALA
252
n
241
ALA
252
A
ALA
253
n
242
ALA
253
A
ILE
254
n
243
ILE
254
A
ILE
255
n
244
ILE
255
A
GLU
256
n
245
GLU
256
A
MET
257
n
246
MET
257
A
ALA
258
n
247
ALA
258
A
GLU
259
n
248
GLU
259
A
SER
260
n
249
SER
260
A
TYR
261
n
250
TYR
261
A
LEU
262
n
251
LEU
262
A
LYS
263
n
252
LYS
263
A
ASP
264
n
253
ASP
264
A
LEU
265
n
254
LEU
265
A
LYS
266
n
255
LYS
266
A
LYS
267
n
256
LYS
267
A
VAL
268
n
257
VAL
268
A
LEU
269
n
258
LEU
269
A
ILE
270
n
259
ILE
270
A
CYS
271
n
260
CYS
271
A
SER
272
n
261
SER
272
A
THR
273
n
262
THR
273
A
LEU
274
n
263
LEU
274
A
LEU
275
n
264
LEU
275
A
GLU
276
n
265
GLU
276
A
GLY
277
n
266
GLY
277
A
GLN
278
n
267
GLN
278
A
TYR
279
n
268
TYR
279
A
GLY
280
n
269
GLY
280
A
HIS
281
n
270
HIS
281
A
SER
282
n
271
SER
282
A
ASP
283
n
272
ASP
283
A
ILE
285
n
273
ILE
285
A
PHE
286
n
274
PHE
286
A
GLY
287
n
275
GLY
287
A
GLY
288
n
276
GLY
288
A
THR
289
n
277
THR
289
A
PRO
290
n
278
PRO
290
A
VAL
291
n
279
VAL
291
A
VAL
292
n
280
VAL
292
A
LEU
293
n
281
LEU
293
A
GLY
294
n
282
GLY
294
A
ALA
295
n
283
ALA
295
A
ASN
296
n
284
ASN
296
A
GLY
297
n
285
GLY
297
A
VAL
298
n
286
VAL
298
A
GLU
299
n
287
GLU
299
A
GLN
301
n
288
GLN
301
A
VAL
302
n
289
VAL
302
A
ILE
303
n
290
ILE
303
A
GLU
304
n
291
GLU
304
A
LEU
305
n
292
LEU
305
A
GLN
306
n
293
GLN
306
A
LEU
307
n
294
LEU
307
A
ASN
308
n
295
ASN
308
A
SER
309
n
296
SER
309
A
GLU
310
n
297
GLU
310
A
GLU
311
n
298
GLU
311
A
LYS
312
n
299
LYS
312
A
ALA
313
n
300
ALA
313
A
LYS
314
n
301
LYS
314
A
PHE
315
n
302
PHE
315
A
ASP
316
n
303
ASP
316
A
GLU
317
n
304
GLU
317
A
ALA
318
n
305
ALA
318
A
ILE
319
n
306
ILE
319
A
ALA
320
n
307
ALA
320
A
GLU
321
n
308
GLU
321
A
THR
322
n
309
THR
322
A
LYS
323
n
310
LYS
323
A
ARG
324
n
311
ARG
324
A
MET
325
n
312
MET
325
A
LYS
326
n
313
LYS
326
A
ALA
327
n
314
ALA
327
A
LEU
328
n
315
LEU
328
A
ALA
329
n
316
ALA
329
A
n
317
330
A
n
318
331
A
n
319
332
A
n
320
333
A
n
321
334
A
n
322
335
A
author_and_software_defined_assembly
PISA,PQS
4
tetrameric
21370
-121
42370
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_665
-x+1,-y+1,z
crystal symmetry operation
81.1360000000
87.1240000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
3_655
-x+1,y,-z
crystal symmetry operation
81.1360000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
4_565
x,-y+1,-z
crystal symmetry operation
0.0000000000
87.1240000000
0.0000000000
A
O
SER
79
A
O
SER
62
A
N
LEU
51
A
N
LEU
33
A
O
VAL
50
A
O
VAL
32
A
N
LEU
25
A
N
LEU
9
A
N
VAL
24
A
N
VAL
8
A
O
ILE
95
A
O
ILE
77
A
N
VAL
96
A
N
VAL
78
A
O
ILE
136
A
O
ILE
123
A
N
VAL
137
A
N
VAL
124
A
O
ILE
161
A
O
ILE
148
A
N
ASN
188
A
N
ASN
175
A
O
THR
207
A
O
THR
194
A
N
VAL
208
A
N
VAL
195
C
A
O
ILE
209
A
O
ILE
198
A
N
VAL
192
A
N
VAL
179
A
O
VAL
200
A
O
VAL
187
A
N
LEU
275
A
N
LEU
264
A
O
ILE
285
A
O
ILE
273
A
N
VAL
292
A
N
VAL
280
A
O
GLU
299
A
O
GLU
287
1
A
CD
LYS
56
A
CD
LYS
38
0
Y
1
A
CE
LYS
56
A
CE
LYS
38
0
Y
1
A
NZ
LYS
56
A
NZ
LYS
38
0
Y
1
A
CB
THR
101
A
CB
THR
83
0
Y
1
A
OG1
THR
101
A
OG1
THR
83
0
Y
1
A
CG2
THR
101
A
CG2
THR
83
0
Y
1
A
CB
LYS
102
A
CB
LYS
84
0
Y
1
A
CG
LYS
102
A
CG
LYS
84
0
Y
1
A
CD
LYS
102
A
CD
LYS
84
0
Y
1
A
CE
LYS
102
A
CE
LYS
84
0
Y
1
A
NZ
LYS
102
A
NZ
LYS
84
0
Y
1
A
CB
ASP
111
A
CB
ASP
97
0
Y
1
A
CG
ASP
111
A
CG
ASP
97
0
Y
1
A
OD1
ASP
111
A
OD1
ASP
97
0
Y
1
A
OD2
ASP
111
A
OD2
ASP
97
0
Y
1
A
CB
LEU
112
A
CB
LEU
98
0
Y
1
A
CG
LEU
112
A
CG
LEU
98
0
Y
1
A
CD1
LEU
112
A
CD1
LEU
98
0
Y
1
A
CD2
LEU
112
A
CD2
LEU
98
0
Y
1
A
CG
LYS
118
A
CG
LYS
104
0
Y
1
A
CD
LYS
118
A
CD
LYS
104
0
Y
1
A
CE
LYS
118
A
CE
LYS
104
0
Y
1
A
NZ
LYS
118
A
NZ
LYS
104
0
Y
1
A
CD
LYS
129
A
CD
LYS
115
0
Y
1
A
CE
LYS
129
A
CE
LYS
115
0
Y
1
A
NZ
LYS
129
A
NZ
LYS
115
0
Y
1
A
CE
LYS
198
A
CE
LYS
185
0
Y
1
A
NZ
LYS
198
A
NZ
LYS
185
0
Y
1
A
CG
GLU
226
A
CG
GLU
215
0
Y
1
A
CD
GLU
226
A
CD
GLU
215
0
Y
1
A
OE1
GLU
226
A
OE1
GLU
215
0
Y
1
A
OE2
GLU
226
A
OE2
GLU
215
0
Y
1
A
CG
HIS
243
A
CG
HIS
232
0
Y
1
A
ND1
HIS
243
A
ND1
HIS
232
0
Y
1
A
CD2
HIS
243
A
CD2
HIS
232
0
Y
1
A
CE1
HIS
243
A
CE1
HIS
232
0
Y
1
A
NE2
HIS
243
A
NE2
HIS
232
0
Y
1
A
CE
LYS
312
A
CE
LYS
299
0
Y
1
A
NZ
LYS
312
A
NZ
LYS
299
0
Y
1
A
MET
17
A
MET
1
1
Y
B
1
A
PRO
103
A
PRO
86
0
Y
C
1
A
GLY
103
A
GLY
87
0
Y
D
1
A
LYS
103
A
LYS
88
0
Y
E
1
A
SER
103
A
SER
89
0
Y
A
1
A
ASP
105
A
ASP
90
0
Y
B
1
A
LYS
105
A
LYS
91
0
Y
1
A
GLU
106
A
GLU
92
0
Y
1
A
TRP
107
A
TRP
93
0
Y
1
A
ASN
108
A
ASN
94
0
Y
1
A
ARG
109
A
ARG
95
0
Y
1
A
ASP
110
A
ASP
96
0
Y
1
A
HIS
330
A
HIS
317
1
Y
1
A
HIS
331
A
HIS
318
1
Y
1
A
HIS
332
A
HIS
319
1
Y
1
A
HIS
333
A
HIS
320
1
Y
1
A
HIS
334
A
HIS
321
1
Y
1
A
HIS
335
A
HIS
322
1
Y
1
A
A
O
O
HOH
HOH
435
436
2.19
A
1
A
ALA
103
-33.32
1
A
HIS
68
0.148
SIDE CHAIN
A
B
1
A
A
C
N
ALA
PRO
103
103
1.02
1
A
A
C
N
ASP
ASP
110
111
1.86
1
12.77
2.00
110.40
123.17
A
A
A
CB
CA
C
LYS
LYS
LYS
102
102
102
N
A
A
B
1
44.92
2.80
117.10
162.02
A
A
A
CA
C
N
ALA
ALA
PRO
103
103
103
Y
A
A
B
1
-48.66
1.90
121.10
72.44
A
A
A
O
C
N
ALA
ALA
PRO
103
103
103
Y
A
B
B
1
25.97
1.50
119.30
145.27
A
A
A
C
N
CA
ALA
PRO
PRO
103
103
103
Y
A
B
B
1
-26.98
2.10
128.40
101.42
A
A
A
C
N
CD
ALA
PRO
PRO
103
103
103
Y
1
5.47
0.90
118.30
123.77
A
A
A
CB
CG
OD2
ASP
ASP
ASP
110
110
110
N
1
18.49
2.00
110.40
128.89
A
A
A
CB
CA
C
ASP
ASP
ASP
111
111
111
N
1
-29.44
1.80
110.60
81.16
A
A
A
N
CA
CB
ASP
ASP
ASP
111
111
111
N
1
23.17
2.20
113.40
136.57
A
A
A
CA
CB
CG
ASP
ASP
ASP
111
111
111
N
1
6.63
0.90
118.30
124.93
A
A
A
CB
CG
OD2
ASP
ASP
ASP
111
111
111
N
1
17.87
2.60
111.60
129.47
A
A
A
CB
CG
CD
LYS
LYS
LYS
129
129
129
N
1
7.75
0.90
118.30
126.05
A
A
A
CB
CG
OD2
ASP
ASP
ASP
168
168
168
N
1
5.87
0.90
118.30
124.17
A
A
A
CB
CG
OD2
ASP
ASP
ASP
186
186
186
N
1
-12.54
1.60
129.70
117.16
A
A
A
CB
CG
CD2
HIS
HIS
HIS
243
243
243
N
1
6.86
0.90
118.30
125.16
A
A
A
CB
CG
OD2
ASP
ASP
ASP
283
283
283
N
1
A
A
CG
OD1
ASP
ASP
86
86
0.145
0.023
1.249
1.394
N
1
A
A
CA
CB
THR
THR
101
101
0.227
0.026
1.529
1.756
N
1
A
A
CA
CB
LYS
LYS
102
102
-0.274
0.022
1.535
1.261
N
A
B
1
A
A
C
N
ALA
PRO
103
103
-0.315
0.019
1.338
1.023
Y
1
A
A
CB
CG
ASP
ASP
110
110
0.152
0.021
1.513
1.665
N
1
A
A
CG
CD
LYS
LYS
129
129
-0.388
0.034
1.520
1.132
N
1
A
A
CB
CG
GLU
GLU
226
226
-0.135
0.019
1.517
1.382
N
1
A
A
CD
CE
LYS
LYS
312
312
-0.164
0.025
1.508
1.344
N
1
A
A
O
O
HOH
HOH
364
365
0.81
1_555
3_655
1
A
ASN
57
70.53
-42.12
1
A
ASN
108
-168.49
-144.19
1
A
HIS
243
74.87
36.17
1
A
TYR
247
-140.26
-19.51
9.879
-0.90
0.00
0.00
1.00
0.00
-0.10
0.956
0.932
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS. THE PEPTIDE BOND DISTANCE BETWEEN RESIDUES 110 AND 111 IS 1.86A.
0.18354
0.14311
0.14521
0.14521
2.01
29.75
1091
21192
20101
5.1
95.86
2.785
0.080
RANDOM
1
THROUGHOUT
0
0
MOLECULAR REPLACEMENT
0.150
0.135
0.80
0.80
1.40
1LDG
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
2.01
29.75
225
2658
50
0
2383
0.024
0.022
2344
0.012
0.020
2193
1.815
1.993
3185
1.646
3.000
5101
5.821
5.000
302
0.102
0.200
385
0.027
0.020
2561
0.039
0.020
407
0.206
0.200
428
0.233
0.200
2183
0.083
0.200
1156
0.141
0.200
133
0.293
0.200
16
0.355
0.200
83
0.468
0.200
19
0.985
1.500
1500
1.665
2.000
2415
2.819
3.000
844
4.273
4.500
770
0.197
0.136
2.063
82
1279
1279
20
2.00
30.0
1T2C
21912
21521
2
2
0.044
1
28.5
4.0
98.3
2.00
2.09
10.1
2693
0.105
1
99.8
refinement
REFMAC
5.1.24
data reduction
DENZO
data scaling
SCALEPACK
phasing
AMoRE
Plasmodium falciparum lactate dehydrogenase complexed with NADH
1
N
N
2
N
N
3
N
N
4
N
N
The biological assembly is a tetramer generated from the monomer
in the asymmetric unit by the operations:
A
GLY
29
A
GLY
13
HELX_P
A
ASN
44
A
ASN
27
1
1
15
A
ASN
57
A
ASN
39
HELX_P
A
HIS
68
A
HIS
50
1
2
12
A
HIS
68
A
HIS
50
HELX_P
A
TYR
73
A
TYR
56
1
3
7
B
A
THR
84
A
THR
66
HELX_P
A
ALA
89
A
ALA
71
5
4
6
A
SER
103
A
SER
89
HELX_P
A
TRP
107
A
TRP
93
5
5
5
E
A
ASP
111
A
ASP
97
HELX_P
A
CYS
131
A
CYS
117
1
6
21
A
PRO
141
A
PRO
128
HELX_P
A
GLY
154
A
GLY
141
1
7
14
A
PRO
156
A
PRO
143
HELX_P
A
ASN
158
A
ASN
145
5
8
3
A
GLY
164
A
GLY
151
HELX_P
A
ASN
181
A
ASN
168
1
9
18
A
CYS
183
A
CYS
170
HELX_P
A
ARG
185
A
ARG
172
5
10
3
A
LYS
203
A
LYS
190
HELX_P
A
TYR
205
A
TYR
192
5
11
3
A
LEU
210
A
LEU
200
HELX_P
A
ASN
215
A
ASN
206
1
12
7
A
A
SER
220
A
SER
210
HELX_P
A
ASN
234
A
ASN
223
1
13
14
A
ASN
234
A
ASN
223
HELX_P
A
ASN
241
A
ASN
230
1
14
8
A
TYR
247
A
TYR
236
HELX_P
A
LYS
263
A
LYS
252
1
15
17
A
GLN
278
A
GLN
267
HELX_P
A
GLY
280
A
GLY
269
5
16
3
A
ASN
308
A
ASN
295
HELX_P
A
ALA
329
A
ALA
316
1
17
22
OXIDOREDUCTASE
Binary complex, OXIDOREDUCTASE
A
ASN
140
A
ASN
127
1
A
PRO
141
A
PRO
128
-5.75
LDH1_PLAFD
UNP
1
1
Q27743
MAPKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAGADVVIVTA
GFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVMVQLLHQHSGVPKNKIIGLGGVLDTSRLK
YYISQKLNVCPRDVNAHIVGAHGNKMVLLKRYITVGGIPLQEFINNKLISDAELEAIFDRTVNTALEIVNLHASPYVAPA
AAIIEMAESYLKDLKKVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIELQLNSEEKAKFDEAIAETKRMKALA
1
316
1T2C
17
329
Q27743
A
1
1
316
1
expression tag
HIS
330
1T2C
A
Q27743
UNP
317
1
expression tag
HIS
331
1T2C
A
Q27743
UNP
318
1
expression tag
HIS
332
1T2C
A
Q27743
UNP
319
1
expression tag
HIS
333
1T2C
A
Q27743
UNP
320
1
expression tag
HIS
334
1T2C
A
Q27743
UNP
321
1
expression tag
HIS
335
1T2C
A
Q27743
UNP
322
6
3
2
3
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
VAL
78
A
VAL
61
A
SER
81
A
SER
64
A
ASP
47
A
ASP
30
A
PHE
52
A
PHE
34
A
LYS
22
A
LYS
6
A
VAL
26
A
VAL
10
A
VAL
93
A
VAL
75
A
VAL
96
A
VAL
78
A
PHE
134
A
PHE
121
A
VAL
137
A
VAL
124
A
ILE
160
A
ILE
147
A
GLY
162
A
GLY
149
A
VAL
187
A
VAL
174
A
ASN
188
A
ASN
175
A
THR
207
A
THR
194
A
VAL
208
A
VAL
195
A
ILE
209
A
ILE
198
A
PRO
209
A
PRO
199
C
D
A
ILE
191
A
ILE
178
A
VAL
192
A
VAL
179
A
VAL
200
A
VAL
187
A
LEU
201
A
LEU
188
A
LYS
267
A
LYS
256
A
GLU
276
A
GLU
265
A
SER
282
A
SER
271
A
GLY
294
A
GLY
282
A
GLY
297
A
GLY
285
A
VAL
302
A
VAL
289
BINDING SITE FOR RESIDUE NAI A 336
A
NAI
336
Software
26
BINDING SITE FOR RESIDUE GOL A 337
A
GOL
337
Software
9
A
GLY
29
A
GLY
13
26
1_555
A
MET
30
A
MET
14
26
1_555
A
ILE
31
A
ILE
15
26
1_555
A
PHE
52
A
PHE
34
26
1_555
A
ASP
53
A
ASP
35
26
1_555
A
ILE
54
A
ILE
36
26
1_555
A
VAL
55
A
VAL
37
26
1_555
A
TYR
85
A
TYR
67
26
1_555
A
THR
97
A
THR
79
26
1_555
A
ALA
98
A
ALA
80
26
1_555
A
GLY
99
A
GLY
81
26
1_555
A
PHE
100
A
PHE
82
26
1_555
A
VAL
138
A
VAL
125
26
1_555
A
THR
139
A
THR
126
26
1_555
A
ASN
140
A
ASN
127
26
1_555
A
VAL
142
A
VAL
129
26
1_555
A
LEU
163
A
LEU
150
26
1_555
A
LEU
167
A
LEU
154
26
1_555
A
HIS
195
A
HIS
182
26
1_555
A
HOH
348
D
HOH
26
1_555
A
HOH
349
D
HOH
26
1_555
A
HOH
350
D
HOH
26
1_555
A
HOH
351
D
HOH
26
1_555
A
HOH
371
D
HOH
26
1_555
A
HOH
542
D
HOH
26
1_555
A
HOH
562
D
HOH
26
1_555
A
THR
169
A
THR
156
9
1_555
A
LYS
173
A
LYS
160
9
1_555
A
ASN
188
A
ASN
175
9
1_555
A
ALA
189
A
ALA
176
9
1_555
A
GLY
209
A
GLY
196
A
9
4_565
A
VAL
268
A
VAL
257
9
1_555
A
HOH
424
D
HOH
9
1_555
A
HOH
429
D
HOH
9
1_555
A
HOH
440
D
HOH
9
1_555
23
I 2 2 2