0.012421
0.000000
0.000000
0.000000
0.011550
0.000000
0.000000
0.000000
0.011069
0.00000
0.00000
0.00000
Cameron, A.
Read, J.
Tranter, R.
Winter, V.J.
Sessions, R.B.
Brady, R.L.
Vivas, L.
Easton, A.
Kendrick, H.
Croft, S.L.
Barros, D.
Lavandera, J.L.
Martin, J.J.
Risco, F.
Garcia-Ochoa, S.
Gamo, F.J.
Sanz, L.
Leon, L.
Ruiz, J.R.
Gabarro, R.
Mallo, A.
De Las Heras, F.G.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
80.507
86.583
90.339
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C21 H27 N7 O14 P2
663.425
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
non-polymer
C2 O4 -2
88.019
OXALATE ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
C
N
138
N
O
N
139
N
C
N
140
N
O
N
141
N
C
N
142
N
O
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
N
N
152
S
C
N
153
N
C
N
154
N
O
N
155
N
C
Y
156
N
C
Y
157
N
N
Y
158
N
C
Y
159
N
C
Y
160
N
N
N
161
N
O
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
O
N
173
N
H
N
174
N
H
N
175
N
N
N
176
S
C
N
177
N
C
N
178
N
O
N
179
S
C
N
180
N
C
N
181
N
C
N
182
N
C
N
183
N
O
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
N
N
198
S
C
N
199
N
C
N
200
N
O
N
201
N
C
N
202
N
C
N
203
N
C
N
204
N
C
N
205
N
O
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
N
N
220
S
C
N
221
N
C
N
222
N
O
N
223
N
C
N
224
N
C
N
225
N
C
N
226
N
C
N
227
N
N
N
228
N
O
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
N
N
245
S
C
N
246
N
C
N
247
N
O
N
248
N
C
N
249
N
C
N
250
N
S
N
251
N
C
N
252
N
O
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
S
P
N
265
N
O
N
266
N
O
N
267
N
O
N
268
N
C
N
269
R
C
N
270
N
O
N
271
S
C
N
272
N
O
N
273
R
C
N
274
N
O
N
275
R
C
Y
276
N
N
Y
277
N
C
Y
278
N
N
Y
279
N
C
Y
280
N
C
N
281
N
N
Y
282
N
N
Y
283
N
C
Y
284
N
N
Y
285
N
C
N
286
N
O
N
287
N
P
N
288
N
O
N
289
N
O
N
290
N
O
N
291
N
C
N
292
R
C
N
293
N
O
N
294
S
C
N
295
N
O
N
296
R
C
N
297
N
O
N
298
R
C
Y
299
N
N
Y
300
N
C
Y
301
N
C
N
302
N
C
N
303
N
O
N
304
N
N
Y
305
N
C
Y
306
N
C
Y
307
N
C
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
C
N
336
N
C
N
337
N
O
N
338
N
O
N
339
N
O
N
340
N
O
N
341
N
N
N
342
S
C
N
343
N
C
N
344
N
O
N
345
N
C
Y
346
N
C
Y
347
N
C
Y
348
N
C
Y
349
N
C
Y
350
N
C
Y
351
N
C
N
352
N
O
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
N
N
365
S
C
N
366
N
C
N
367
N
O
N
368
N
C
N
369
N
C
N
370
N
C
N
371
N
O
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
N
N
382
S
C
N
383
N
C
N
384
N
O
N
385
N
C
N
386
N
O
N
387
N
O
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
N
N
396
S
C
N
397
N
C
N
398
N
O
N
399
R
C
N
400
N
O
N
401
N
C
N
402
N
O
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
N
N
413
S
C
N
414
N
C
N
415
N
O
N
416
N
C
Y
417
N
C
Y
418
N
C
Y
419
N
C
Y
420
N
N
Y
421
N
C
Y
422
N
C
Y
423
N
C
Y
424
N
C
Y
425
N
C
N
426
N
O
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
N
N
440
S
C
N
441
N
C
N
442
N
O
N
443
N
C
Y
444
N
C
Y
445
N
C
Y
446
N
C
Y
447
N
C
Y
448
N
C
Y
449
N
C
N
450
N
O
N
451
N
O
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
N
N
464
S
C
N
465
N
C
N
466
N
O
N
467
N
C
N
468
N
C
N
469
N
C
N
470
N
O
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
doub
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
Y
153
N
sing
Y
154
N
doub
Y
155
N
doub
N
156
N
sing
Y
157
N
sing
N
158
N
sing
Y
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
doub
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
doub
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
doub
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
doub
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
Y
273
N
sing
Y
274
N
sing
Y
275
N
doub
N
276
N
sing
Y
277
N
sing
Y
278
N
sing
Y
279
N
doub
N
280
N
sing
Y
281
N
doub
N
282
N
sing
N
283
N
sing
Y
284
N
sing
Y
285
N
doub
N
286
N
sing
Y
287
N
sing
N
288
N
sing
N
289
N
doub
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
Y
310
N
sing
Y
311
N
doub
Y
312
N
doub
N
313
N
sing
N
314
N
sing
Y
315
N
sing
N
316
N
doub
N
317
N
sing
N
318
N
sing
N
319
N
sing
Y
320
N
doub
N
321
N
sing
Y
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
doub
N
327
N
sing
N
328
N
doub
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
doub
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
Y
341
N
doub
Y
342
N
sing
Y
343
N
sing
N
344
N
sing
Y
345
N
doub
N
346
N
sing
Y
347
N
doub
N
348
N
sing
Y
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
doub
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
doub
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
doub
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
doub
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
Y
410
N
doub
Y
411
N
sing
Y
412
N
sing
N
413
N
sing
Y
414
N
doub
Y
415
N
sing
Y
416
N
sing
N
417
N
sing
Y
418
N
sing
Y
419
N
doub
N
420
N
sing
Y
421
N
doub
N
422
N
sing
Y
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
doub
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
Y
438
N
doub
Y
439
N
sing
Y
440
N
sing
N
441
N
sing
Y
442
N
doub
N
443
N
sing
Y
444
N
doub
N
445
N
sing
Y
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
doub
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
N
468
N
sing
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
279
31429
31439
10.1074/jbc.M402433200
15117937
Identification and Activity of a Series of Azole-based Compounds with Lactate Dehydrogenase-directed Anti-malarial Activity.
2004
10.2210/pdb1t2d/pdb
pdb_00001t2d
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2001-01-01
ADSC QUANTUM 4
SINGLE WAVELENGTH
M
x-ray
1
0.9091
1.0
X11
EMBL/DESY, HAMBURG
0.9091
SYNCHROTRON
EMBL/DESY, HAMBURG BEAMLINE X11
34977.586
L-lactate dehydrogenase
1.1.1.27
1
man
polymer
88.019
OXALATE ION
1
syn
non-polymer
663.425
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
1
syn
non-polymer
92.094
GLYCEROL
1
syn
non-polymer
18.015
water
295
nat
water
LDH-P
no
no
MAPKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAGADVVIVTA
GFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVMVQLLHQHSGVPKNKIIGLGGVLDTSRLK
YYISQKLNVCPRDVNAHIVGAHGNKMVLLKRYITVGGIPLQEFINNKLISDAELEAIFDRTVNTALEIVNLHASPYVAPA
AAIIEMAESYLKDLKKVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIELQLNSEEKAKFDEAIAETKRMKALAHHHH
HH
MAPKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAGADVVIVTA
GFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVMVQLLHQHSGVPKNKIIGLGGVLDTSRLK
YYISQKLNVCPRDVNAHIVGAHGNKMVLLKRYITVGGIPLQEFINNKLISDAELEAIFDRTVNTALEIVNLHASPYVAPA
AAIIEMAESYLKDLKKVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIELQLNSEEKAKFDEAIAETKRMKALAHHHH
HH
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
malaria parasite P. falciparum
Plasmodium
Escherichia
sample
LDH
5833
Plasmodium falciparum
562
Escherichia coli
JM109
plasmid
pKK223
1
2.2
40
VAPOR DIFFUSION, HANGING DROP
7.5
MPD, Hepes, Imidazole, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K
291
chem_comp_atom
chem_comp_bond
database_2
diffrn_source
pdbx_initial_refinement_model
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Derived calculations
Version format compliance
Data collection
Database references
Derived calculations
Refinement description
1
0
2004-05-11
1
1
2008-04-30
1
2
2011-07-13
1
3
2023-08-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_diffrn_source.pdbx_synchrotron_site
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
pfLDH with NADH and oxamate
pfLDH with NAD+ and 4-hydroxy-1,2,5-oxadiazole-3-carboxylic acid
pfLDH with NADH and 3-hydroxyisoxazole-4-carboxylic acid
pfLDH with NADH and 4-hydroxy-1,2,5-thiadiazole-3-carboxylic acid
pfLDH with NADH
pfLDH with NADH and oxamate
humanLDH with NAD+ and 4-hydroxy-1,2,5-oxadiazole-3-carboxylic acid
RCSB
Y
RCSB
2004-04-21
REL
REL
OXL
OXALATE ION
NAD
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
GOL
GLYCEROL
HOH
water
1LDG
PDB
experimental model
OXL
317
2
OXL
OXL
322
A
NAD
316
3
NAD
NAD
323
A
GOL
1
4
GOL
GOL
324
A
HOH
1
5
HOH
HOH
325
A
HOH
2
5
HOH
HOH
326
A
HOH
3
5
HOH
HOH
327
A
HOH
4
5
HOH
HOH
328
A
HOH
5
5
HOH
HOH
329
A
HOH
6
5
HOH
HOH
330
A
HOH
8
5
HOH
HOH
331
A
HOH
9
5
HOH
HOH
332
A
HOH
10
5
HOH
HOH
333
A
HOH
11
5
HOH
HOH
334
A
HOH
12
5
HOH
HOH
335
A
HOH
13
5
HOH
HOH
336
A
HOH
14
5
HOH
HOH
337
A
HOH
15
5
HOH
HOH
338
A
HOH
16
5
HOH
HOH
339
A
HOH
18
5
HOH
HOH
340
A
HOH
19
5
HOH
HOH
341
A
HOH
20
5
HOH
HOH
342
A
HOH
21
5
HOH
HOH
343
A
HOH
22
5
HOH
HOH
344
A
HOH
23
5
HOH
HOH
345
A
HOH
24
5
HOH
HOH
346
A
HOH
25
5
HOH
HOH
347
A
HOH
26
5
HOH
HOH
348
A
HOH
27
5
HOH
HOH
349
A
HOH
28
5
HOH
HOH
350
A
HOH
29
5
HOH
HOH
351
A
HOH
30
5
HOH
HOH
352
A
HOH
31
5
HOH
HOH
353
A
HOH
32
5
HOH
HOH
354
A
HOH
33
5
HOH
HOH
355
A
HOH
34
5
HOH
HOH
356
A
HOH
35
5
HOH
HOH
357
A
HOH
36
5
HOH
HOH
358
A
HOH
37
5
HOH
HOH
359
A
HOH
38
5
HOH
HOH
360
A
HOH
39
5
HOH
HOH
361
A
HOH
40
5
HOH
HOH
362
A
HOH
41
5
HOH
HOH
363
A
HOH
42
5
HOH
HOH
364
A
HOH
43
5
HOH
HOH
365
A
HOH
44
5
HOH
HOH
366
A
HOH
45
5
HOH
HOH
367
A
HOH
46
5
HOH
HOH
368
A
HOH
47
5
HOH
HOH
369
A
HOH
48
5
HOH
HOH
370
A
HOH
49
5
HOH
HOH
371
A
HOH
50
5
HOH
HOH
372
A
HOH
51
5
HOH
HOH
373
A
HOH
52
5
HOH
HOH
374
A
HOH
53
5
HOH
HOH
375
A
HOH
54
5
HOH
HOH
376
A
HOH
55
5
HOH
HOH
377
A
HOH
56
5
HOH
HOH
378
A
HOH
57
5
HOH
HOH
379
A
HOH
58
5
HOH
HOH
380
A
HOH
59
5
HOH
HOH
381
A
HOH
60
5
HOH
HOH
382
A
HOH
61
5
HOH
HOH
383
A
HOH
62
5
HOH
HOH
384
A
HOH
63
5
HOH
HOH
385
A
HOH
64
5
HOH
HOH
386
A
HOH
65
5
HOH
HOH
387
A
HOH
66
5
HOH
HOH
388
A
HOH
67
5
HOH
HOH
389
A
HOH
68
5
HOH
HOH
390
A
HOH
69
5
HOH
HOH
391
A
HOH
70
5
HOH
HOH
392
A
HOH
71
5
HOH
HOH
393
A
HOH
72
5
HOH
HOH
394
A
HOH
73
5
HOH
HOH
395
A
HOH
74
5
HOH
HOH
396
A
HOH
75
5
HOH
HOH
397
A
HOH
76
5
HOH
HOH
398
A
HOH
77
5
HOH
HOH
399
A
HOH
78
5
HOH
HOH
400
A
HOH
79
5
HOH
HOH
401
A
HOH
80
5
HOH
HOH
402
A
HOH
81
5
HOH
HOH
403
A
HOH
82
5
HOH
HOH
404
A
HOH
83
5
HOH
HOH
405
A
HOH
84
5
HOH
HOH
406
A
HOH
85
5
HOH
HOH
407
A
HOH
86
5
HOH
HOH
408
A
HOH
87
5
HOH
HOH
409
A
HOH
88
5
HOH
HOH
410
A
HOH
89
5
HOH
HOH
411
A
HOH
90
5
HOH
HOH
412
A
HOH
91
5
HOH
HOH
413
A
HOH
92
5
HOH
HOH
414
A
HOH
93
5
HOH
HOH
415
A
HOH
94
5
HOH
HOH
416
A
HOH
95
5
HOH
HOH
417
A
HOH
96
5
HOH
HOH
418
A
HOH
97
5
HOH
HOH
419
A
HOH
98
5
HOH
HOH
420
A
HOH
99
5
HOH
HOH
421
A
HOH
100
5
HOH
HOH
422
A
HOH
101
5
HOH
HOH
423
A
HOH
102
5
HOH
HOH
424
A
HOH
103
5
HOH
HOH
425
A
HOH
104
5
HOH
HOH
426
A
HOH
105
5
HOH
HOH
427
A
HOH
106
5
HOH
HOH
428
A
HOH
107
5
HOH
HOH
429
A
HOH
108
5
HOH
HOH
430
A
HOH
109
5
HOH
HOH
431
A
HOH
110
5
HOH
HOH
432
A
HOH
111
5
HOH
HOH
433
A
HOH
112
5
HOH
HOH
434
A
HOH
114
5
HOH
HOH
435
A
HOH
115
5
HOH
HOH
436
A
HOH
116
5
HOH
HOH
437
A
HOH
117
5
HOH
HOH
438
A
HOH
118
5
HOH
HOH
439
A
HOH
119
5
HOH
HOH
440
A
HOH
120
5
HOH
HOH
441
A
HOH
121
5
HOH
HOH
442
A
HOH
122
5
HOH
HOH
443
A
HOH
123
5
HOH
HOH
444
A
HOH
124
5
HOH
HOH
445
A
HOH
125
5
HOH
HOH
446
A
HOH
126
5
HOH
HOH
447
A
HOH
127
5
HOH
HOH
448
A
HOH
128
5
HOH
HOH
449
A
HOH
129
5
HOH
HOH
450
A
HOH
130
5
HOH
HOH
451
A
HOH
131
5
HOH
HOH
452
A
HOH
132
5
HOH
HOH
453
A
HOH
133
5
HOH
HOH
454
A
HOH
134
5
HOH
HOH
455
A
HOH
135
5
HOH
HOH
456
A
HOH
136
5
HOH
HOH
457
A
HOH
137
5
HOH
HOH
458
A
HOH
138
5
HOH
HOH
459
A
HOH
139
5
HOH
HOH
460
A
HOH
140
5
HOH
HOH
461
A
HOH
141
5
HOH
HOH
462
A
HOH
142
5
HOH
HOH
463
A
HOH
143
5
HOH
HOH
464
A
HOH
144
5
HOH
HOH
465
A
HOH
145
5
HOH
HOH
466
A
HOH
146
5
HOH
HOH
467
A
HOH
147
5
HOH
HOH
468
A
HOH
148
5
HOH
HOH
469
A
HOH
149
5
HOH
HOH
470
A
HOH
150
5
HOH
HOH
471
A
HOH
151
5
HOH
HOH
472
A
HOH
152
5
HOH
HOH
473
A
HOH
153
5
HOH
HOH
474
A
HOH
154
5
HOH
HOH
475
A
HOH
155
5
HOH
HOH
476
A
HOH
156
5
HOH
HOH
477
A
HOH
157
5
HOH
HOH
478
A
HOH
158
5
HOH
HOH
479
A
HOH
159
5
HOH
HOH
480
A
HOH
160
5
HOH
HOH
481
A
HOH
161
5
HOH
HOH
482
A
HOH
162
5
HOH
HOH
483
A
HOH
163
5
HOH
HOH
484
A
HOH
164
5
HOH
HOH
485
A
HOH
165
5
HOH
HOH
486
A
HOH
166
5
HOH
HOH
487
A
HOH
167
5
HOH
HOH
488
A
HOH
168
5
HOH
HOH
489
A
HOH
169
5
HOH
HOH
490
A
HOH
170
5
HOH
HOH
491
A
HOH
171
5
HOH
HOH
492
A
HOH
172
5
HOH
HOH
493
A
HOH
173
5
HOH
HOH
494
A
HOH
174
5
HOH
HOH
495
A
HOH
175
5
HOH
HOH
496
A
HOH
176
5
HOH
HOH
497
A
HOH
177
5
HOH
HOH
498
A
HOH
178
5
HOH
HOH
499
A
HOH
179
5
HOH
HOH
500
A
HOH
180
5
HOH
HOH
501
A
HOH
181
5
HOH
HOH
502
A
HOH
182
5
HOH
HOH
503
A
HOH
183
5
HOH
HOH
504
A
HOH
184
5
HOH
HOH
505
A
HOH
185
5
HOH
HOH
506
A
HOH
186
5
HOH
HOH
507
A
HOH
187
5
HOH
HOH
508
A
HOH
188
5
HOH
HOH
509
A
HOH
189
5
HOH
HOH
510
A
HOH
190
5
HOH
HOH
511
A
HOH
192
5
HOH
HOH
512
A
HOH
193
5
HOH
HOH
513
A
HOH
194
5
HOH
HOH
514
A
HOH
195
5
HOH
HOH
515
A
HOH
196
5
HOH
HOH
516
A
HOH
197
5
HOH
HOH
517
A
HOH
198
5
HOH
HOH
518
A
HOH
199
5
HOH
HOH
519
A
HOH
200
5
HOH
HOH
520
A
HOH
201
5
HOH
HOH
521
A
HOH
202
5
HOH
HOH
522
A
HOH
203
5
HOH
HOH
523
A
HOH
204
5
HOH
HOH
524
A
HOH
205
5
HOH
HOH
525
A
HOH
206
5
HOH
HOH
526
A
HOH
207
5
HOH
HOH
527
A
HOH
208
5
HOH
HOH
528
A
HOH
209
5
HOH
HOH
529
A
HOH
210
5
HOH
HOH
530
A
HOH
211
5
HOH
HOH
531
A
HOH
212
5
HOH
HOH
532
A
HOH
213
5
HOH
HOH
533
A
HOH
214
5
HOH
HOH
534
A
HOH
215
5
HOH
HOH
535
A
HOH
216
5
HOH
HOH
536
A
HOH
217
5
HOH
HOH
537
A
HOH
218
5
HOH
HOH
538
A
HOH
219
5
HOH
HOH
539
A
HOH
220
5
HOH
HOH
540
A
HOH
221
5
HOH
HOH
541
A
HOH
222
5
HOH
HOH
542
A
HOH
223
5
HOH
HOH
543
A
HOH
224
5
HOH
HOH
544
A
HOH
225
5
HOH
HOH
545
A
HOH
226
5
HOH
HOH
546
A
HOH
227
5
HOH
HOH
547
A
HOH
228
5
HOH
HOH
548
A
HOH
229
5
HOH
HOH
549
A
HOH
230
5
HOH
HOH
550
A
HOH
231
5
HOH
HOH
551
A
HOH
232
5
HOH
HOH
552
A
HOH
233
5
HOH
HOH
553
A
HOH
234
5
HOH
HOH
554
A
HOH
235
5
HOH
HOH
555
A
HOH
237
5
HOH
HOH
556
A
HOH
238
5
HOH
HOH
557
A
HOH
239
5
HOH
HOH
558
A
HOH
240
5
HOH
HOH
559
A
HOH
241
5
HOH
HOH
560
A
HOH
242
5
HOH
HOH
561
A
HOH
243
5
HOH
HOH
562
A
HOH
244
5
HOH
HOH
563
A
HOH
245
5
HOH
HOH
564
A
HOH
246
5
HOH
HOH
565
A
HOH
247
5
HOH
HOH
566
A
HOH
248
5
HOH
HOH
567
A
HOH
249
5
HOH
HOH
568
A
HOH
250
5
HOH
HOH
569
A
HOH
251
5
HOH
HOH
570
A
HOH
252
5
HOH
HOH
571
A
HOH
253
5
HOH
HOH
572
A
HOH
254
5
HOH
HOH
573
A
HOH
255
5
HOH
HOH
574
A
HOH
256
5
HOH
HOH
575
A
HOH
257
5
HOH
HOH
576
A
HOH
258
5
HOH
HOH
577
A
HOH
259
5
HOH
HOH
578
A
HOH
260
5
HOH
HOH
579
A
HOH
261
5
HOH
HOH
580
A
HOH
262
5
HOH
HOH
581
A
HOH
263
5
HOH
HOH
582
A
HOH
264
5
HOH
HOH
583
A
HOH
265
5
HOH
HOH
584
A
HOH
266
5
HOH
HOH
585
A
HOH
267
5
HOH
HOH
586
A
HOH
268
5
HOH
HOH
587
A
HOH
269
5
HOH
HOH
588
A
HOH
270
5
HOH
HOH
589
A
HOH
271
5
HOH
HOH
590
A
HOH
272
5
HOH
HOH
591
A
HOH
273
5
HOH
HOH
592
A
HOH
274
5
HOH
HOH
593
A
HOH
275
5
HOH
HOH
594
A
HOH
276
5
HOH
HOH
595
A
HOH
277
5
HOH
HOH
596
A
HOH
278
5
HOH
HOH
597
A
HOH
279
5
HOH
HOH
598
A
HOH
280
5
HOH
HOH
599
A
HOH
281
5
HOH
HOH
600
A
HOH
282
5
HOH
HOH
601
A
HOH
283
5
HOH
HOH
602
A
HOH
284
5
HOH
HOH
603
A
HOH
285
5
HOH
HOH
604
A
HOH
286
5
HOH
HOH
605
A
HOH
287
5
HOH
HOH
606
A
HOH
288
5
HOH
HOH
607
A
HOH
289
5
HOH
HOH
608
A
HOH
290
5
HOH
HOH
609
A
HOH
291
5
HOH
HOH
610
A
HOH
292
5
HOH
HOH
611
A
HOH
293
5
HOH
HOH
612
A
HOH
294
5
HOH
HOH
613
A
HOH
295
5
HOH
HOH
614
A
HOH
296
5
HOH
HOH
615
A
HOH
297
5
HOH
HOH
616
A
HOH
298
5
HOH
HOH
617
A
HOH
299
5
HOH
HOH
618
A
HOH
300
5
HOH
HOH
619
A
n
1
0
A
ALA
1
n
2
ALA
1
A
PRO
2
n
3
PRO
2
A
LYS
3
n
4
LYS
3
A
ALA
4
n
5
ALA
4
A
LYS
5
n
6
LYS
5
A
ILE
6
n
7
ILE
6
A
VAL
7
n
8
VAL
7
A
LEU
8
n
9
LEU
8
A
VAL
9
n
10
VAL
9
A
GLY
10
n
11
GLY
10
A
SER
11
n
12
SER
11
A
GLY
12
n
13
GLY
12
A
MET
13
n
14
MET
13
A
ILE
14
n
15
ILE
14
A
GLY
15
n
16
GLY
15
A
GLY
16
n
17
GLY
16
A
VAL
17
n
18
VAL
17
A
MET
18
n
19
MET
18
A
ALA
19
n
20
ALA
19
A
THR
20
n
21
THR
20
A
LEU
21
n
22
LEU
21
A
ILE
22
n
23
ILE
22
A
VAL
23
n
24
VAL
23
A
GLN
24
n
25
GLN
24
A
LYS
25
n
26
LYS
25
A
ASN
26
n
27
ASN
26
A
LEU
27
n
28
LEU
27
A
GLY
28
n
29
GLY
28
A
ASP
29
n
30
ASP
29
A
VAL
30
n
31
VAL
30
A
VAL
31
n
32
VAL
31
A
LEU
32
n
33
LEU
32
A
PHE
33
n
34
PHE
33
A
ASP
34
n
35
ASP
34
A
ILE
35
n
36
ILE
35
A
VAL
36
n
37
VAL
36
A
LYS
37
n
38
LYS
37
A
ASN
38
n
39
ASN
38
A
MET
39
n
40
MET
39
A
PRO
40
n
41
PRO
40
A
HIS
41
n
42
HIS
41
A
GLY
42
n
43
GLY
42
A
LYS
43
n
44
LYS
43
A
ALA
44
n
45
ALA
44
A
LEU
45
n
46
LEU
45
A
ASP
46
n
47
ASP
46
A
THR
47
n
48
THR
47
A
SER
48
n
49
SER
48
A
HIS
49
n
50
HIS
49
A
THR
50
n
51
THR
50
A
ASN
51
n
52
ASN
51
A
VAL
52
n
53
VAL
52
A
MET
53
n
54
MET
53
A
ALA
54
n
55
ALA
54
A
TYR
55
n
56
TYR
55
A
SER
56
n
57
SER
56
A
ASN
57
n
58
ASN
57
A
CYS
58
n
59
CYS
58
A
LYS
59
n
60
LYS
59
A
VAL
60
n
61
VAL
60
A
SER
61
n
62
SER
61
A
GLY
62
n
63
GLY
62
A
SER
63
n
64
SER
63
A
ASN
64
n
65
ASN
64
A
THR
65
n
66
THR
65
A
TYR
66
n
67
TYR
66
A
ASP
67
n
68
ASP
67
A
ASP
68
n
69
ASP
68
A
LEU
69
n
70
LEU
69
A
ALA
70
n
71
ALA
70
A
GLY
71
n
72
GLY
71
A
ALA
72
n
73
ALA
72
A
ASP
73
n
74
ASP
73
A
VAL
74
n
75
VAL
74
A
VAL
75
n
76
VAL
75
A
ILE
76
n
77
ILE
76
A
VAL
77
n
78
VAL
77
A
THR
78
n
79
THR
78
A
ALA
79
n
80
ALA
79
A
GLY
80
n
81
GLY
80
A
PHE
81
n
82
PHE
81
A
THR
82
n
83
THR
82
A
LYS
83
n
84
LYS
83
A
ALA
84
n
85
ALA
84
A
PRO
85
n
86
PRO
85
A
GLY
86
n
87
GLY
86
A
LYS
87
n
88
LYS
87
A
SER
88
n
89
SER
88
A
ASP
89
n
90
ASP
89
A
LYS
90
n
91
LYS
90
A
GLU
91
n
92
GLU
91
A
TRP
92
n
93
TRP
92
A
ASN
93
n
94
ASN
93
A
ARG
94
n
95
ARG
94
A
ASP
95
n
96
ASP
95
A
ASP
96
n
97
ASP
96
A
LEU
97
n
98
LEU
97
A
LEU
98
n
99
LEU
98
A
PRO
99
n
100
PRO
99
A
LEU
100
n
101
LEU
100
A
ASN
101
n
102
ASN
101
A
ASN
102
n
103
ASN
102
A
LYS
103
n
104
LYS
103
A
ILE
104
n
105
ILE
104
A
MET
105
n
106
MET
105
A
ILE
106
n
107
ILE
106
A
GLU
107
n
108
GLU
107
A
ILE
108
n
109
ILE
108
A
GLY
109
n
110
GLY
109
A
GLY
110
n
111
GLY
110
A
HIS
111
n
112
HIS
111
A
ILE
112
n
113
ILE
112
A
LYS
113
n
114
LYS
113
A
LYS
114
n
115
LYS
114
A
ASN
115
n
116
ASN
115
A
CYS
116
n
117
CYS
116
A
PRO
117
n
118
PRO
117
A
ASN
118
n
119
ASN
118
A
ALA
119
n
120
ALA
119
A
PHE
120
n
121
PHE
120
A
ILE
121
n
122
ILE
121
A
ILE
122
n
123
ILE
122
A
VAL
123
n
124
VAL
123
A
VAL
124
n
125
VAL
124
A
THR
125
n
126
THR
125
A
ASN
126
n
127
ASN
126
A
PRO
127
n
128
PRO
127
A
VAL
128
n
129
VAL
128
A
ASP
129
n
130
ASP
129
A
VAL
130
n
131
VAL
130
A
MET
131
n
132
MET
131
A
VAL
132
n
133
VAL
132
A
GLN
133
n
134
GLN
133
A
LEU
134
n
135
LEU
134
A
LEU
135
n
136
LEU
135
A
HIS
136
n
137
HIS
136
A
GLN
137
n
138
GLN
137
A
HIS
138
n
139
HIS
138
A
SER
139
n
140
SER
139
A
GLY
140
n
141
GLY
140
A
VAL
141
n
142
VAL
141
A
PRO
142
n
143
PRO
142
A
LYS
143
n
144
LYS
143
A
ASN
144
n
145
ASN
144
A
LYS
145
n
146
LYS
145
A
ILE
146
n
147
ILE
146
A
ILE
147
n
148
ILE
147
A
GLY
148
n
149
GLY
148
A
LEU
149
n
150
LEU
149
A
GLY
150
n
151
GLY
150
A
GLY
151
n
152
GLY
151
A
VAL
152
n
153
VAL
152
A
LEU
153
n
154
LEU
153
A
ASP
154
n
155
ASP
154
A
THR
155
n
156
THR
155
A
SER
156
n
157
SER
156
A
ARG
157
n
158
ARG
157
A
LEU
158
n
159
LEU
158
A
LYS
159
n
160
LYS
159
A
TYR
160
n
161
TYR
160
A
TYR
161
n
162
TYR
161
A
ILE
162
n
163
ILE
162
A
SER
163
n
164
SER
163
A
GLN
164
n
165
GLN
164
A
LYS
165
n
166
LYS
165
A
LEU
166
n
167
LEU
166
A
ASN
167
n
168
ASN
167
A
VAL
168
n
169
VAL
168
A
CYS
169
n
170
CYS
169
A
PRO
170
n
171
PRO
170
A
ARG
171
n
172
ARG
171
A
ASP
172
n
173
ASP
172
A
VAL
173
n
174
VAL
173
A
ASN
174
n
175
ASN
174
A
ALA
175
n
176
ALA
175
A
HIS
176
n
177
HIS
176
A
ILE
177
n
178
ILE
177
A
VAL
178
n
179
VAL
178
A
GLY
179
n
180
GLY
179
A
ALA
180
n
181
ALA
180
A
HIS
181
n
182
HIS
181
A
GLY
182
n
183
GLY
182
A
ASN
183
n
184
ASN
183
A
LYS
184
n
185
LYS
184
A
MET
185
n
186
MET
185
A
VAL
186
n
187
VAL
186
A
LEU
187
n
188
LEU
187
A
LEU
188
n
189
LEU
188
A
LYS
189
n
190
LYS
189
A
ARG
190
n
191
ARG
190
A
TYR
191
n
192
TYR
191
A
ILE
192
n
193
ILE
192
A
THR
193
n
194
THR
193
A
VAL
194
n
195
VAL
194
A
GLY
195
n
196
GLY
195
A
GLY
196
n
197
GLY
196
A
ILE
197
n
198
ILE
197
A
PRO
198
n
199
PRO
198
A
LEU
199
n
200
LEU
199
A
GLN
200
n
201
GLN
200
A
GLU
201
n
202
GLU
201
A
PHE
202
n
203
PHE
202
A
ILE
203
n
204
ILE
203
A
ASN
204
n
205
ASN
204
A
ASN
205
n
206
ASN
205
A
LYS
206
n
207
LYS
206
A
LEU
207
n
208
LEU
207
A
ILE
208
n
209
ILE
208
A
SER
209
n
210
SER
209
A
ASP
210
n
211
ASP
210
A
ALA
211
n
212
ALA
211
A
GLU
212
n
213
GLU
212
A
LEU
213
n
214
LEU
213
A
GLU
214
n
215
GLU
214
A
ALA
215
n
216
ALA
215
A
ILE
216
n
217
ILE
216
A
PHE
217
n
218
PHE
217
A
ASP
218
n
219
ASP
218
A
ARG
219
n
220
ARG
219
A
THR
220
n
221
THR
220
A
VAL
221
n
222
VAL
221
A
ASN
222
n
223
ASN
222
A
THR
223
n
224
THR
223
A
ALA
224
n
225
ALA
224
A
LEU
225
n
226
LEU
225
A
GLU
226
n
227
GLU
226
A
ILE
227
n
228
ILE
227
A
VAL
228
n
229
VAL
228
A
ASN
229
n
230
ASN
229
A
LEU
230
n
231
LEU
230
A
HIS
231
n
232
HIS
231
A
ALA
232
n
233
ALA
232
A
SER
233
n
234
SER
233
A
PRO
234
n
235
PRO
234
A
TYR
235
n
236
TYR
235
A
VAL
236
n
237
VAL
236
A
ALA
237
n
238
ALA
237
A
PRO
238
n
239
PRO
238
A
ALA
239
n
240
ALA
239
A
ALA
240
n
241
ALA
240
A
ALA
241
n
242
ALA
241
A
ILE
242
n
243
ILE
242
A
ILE
243
n
244
ILE
243
A
GLU
244
n
245
GLU
244
A
MET
245
n
246
MET
245
A
ALA
246
n
247
ALA
246
A
GLU
247
n
248
GLU
247
A
SER
248
n
249
SER
248
A
TYR
249
n
250
TYR
249
A
LEU
250
n
251
LEU
250
A
LYS
251
n
252
LYS
251
A
ASP
252
n
253
ASP
252
A
LEU
253
n
254
LEU
253
A
LYS
254
n
255
LYS
254
A
LYS
255
n
256
LYS
255
A
VAL
256
n
257
VAL
256
A
LEU
257
n
258
LEU
257
A
ILE
258
n
259
ILE
258
A
CYS
259
n
260
CYS
259
A
SER
260
n
261
SER
260
A
THR
261
n
262
THR
261
A
LEU
262
n
263
LEU
262
A
LEU
263
n
264
LEU
263
A
GLU
264
n
265
GLU
264
A
GLY
265
n
266
GLY
265
A
GLN
266
n
267
GLN
266
A
TYR
267
n
268
TYR
267
A
GLY
268
n
269
GLY
268
A
HIS
269
n
270
HIS
269
A
SER
270
n
271
SER
270
A
ASP
271
n
272
ASP
271
A
ILE
272
n
273
ILE
272
A
PHE
273
n
274
PHE
273
A
GLY
274
n
275
GLY
274
A
GLY
275
n
276
GLY
275
A
THR
276
n
277
THR
276
A
PRO
277
n
278
PRO
277
A
VAL
278
n
279
VAL
278
A
VAL
279
n
280
VAL
279
A
LEU
280
n
281
LEU
280
A
GLY
281
n
282
GLY
281
A
ALA
282
n
283
ALA
282
A
ASN
283
n
284
ASN
283
A
GLY
284
n
285
GLY
284
A
VAL
285
n
286
VAL
285
A
GLU
286
n
287
GLU
286
A
GLN
287
n
288
GLN
287
A
VAL
288
n
289
VAL
288
A
ILE
289
n
290
ILE
289
A
GLU
290
n
291
GLU
290
A
LEU
291
n
292
LEU
291
A
GLN
292
n
293
GLN
292
A
LEU
293
n
294
LEU
293
A
ASN
294
n
295
ASN
294
A
SER
295
n
296
SER
295
A
GLU
296
n
297
GLU
296
A
GLU
297
n
298
GLU
297
A
LYS
298
n
299
LYS
298
A
ALA
299
n
300
ALA
299
A
LYS
300
n
301
LYS
300
A
PHE
301
n
302
PHE
301
A
ASP
302
n
303
ASP
302
A
GLU
303
n
304
GLU
303
A
ALA
304
n
305
ALA
304
A
ILE
305
n
306
ILE
305
A
ALA
306
n
307
ALA
306
A
GLU
307
n
308
GLU
307
A
THR
308
n
309
THR
308
A
LYS
309
n
310
LYS
309
A
ARG
310
n
311
ARG
310
A
MET
311
n
312
MET
311
A
LYS
312
n
313
LYS
312
A
ALA
313
n
314
ALA
313
A
LEU
314
n
315
LEU
314
A
ALA
315
n
316
ALA
315
A
n
317
316
A
n
318
317
A
n
319
318
A
n
320
319
A
n
321
320
A
n
322
321
A
author_and_software_defined_assembly
PISA,PQS
4
tetrameric
22590
-114
39120
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_665
-x+1,-y+1,z
crystal symmetry operation
80.5070000000
86.5830000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
3_655
-x+1,y,-z
crystal symmetry operation
80.5070000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
4_565
x,-y+1,-z
crystal symmetry operation
0.0000000000
86.5830000000
0.0000000000
A
O
SER
61
A
O
SER
62
A
N
LEU
32
A
N
LEU
33
A
O
VAL
31
A
O
VAL
32
A
N
LEU
8
A
N
LEU
9
A
N
VAL
7
A
N
VAL
8
A
O
VAL
74
A
O
VAL
75
A
N
VAL
77
A
N
VAL
78
A
O
ILE
122
A
O
ILE
123
A
N
VAL
123
A
N
VAL
124
A
O
ILE
147
A
O
ILE
148
A
N
ASN
174
A
N
ASN
175
A
O
THR
193
A
O
THR
194
A
N
VAL
194
A
N
VAL
195
A
O
ILE
197
A
O
ILE
198
A
N
VAL
178
A
N
VAL
179
A
O
VAL
186
A
O
VAL
187
A
N
LEU
263
A
N
LEU
264
A
O
ILE
272
A
O
ILE
273
A
N
VAL
279
A
N
VAL
280
A
O
GLU
286
A
O
GLU
287
1
A
MET
0
A
MET
1
1
Y
1
A
HIS
316
A
HIS
317
1
Y
1
A
HIS
317
A
HIS
318
1
Y
1
A
HIS
318
A
HIS
319
1
Y
1
A
HIS
319
A
HIS
320
1
Y
1
A
HIS
320
A
HIS
321
1
Y
1
A
HIS
321
A
HIS
322
1
Y
1
A
ASN
38
73.92
-46.66
1
A
HIS
231
-157.35
-73.30
1
A
TYR
235
-141.90
-31.38
6.560
0.00
0.00
0.00
0.00
0.00
0.00
0.970
0.968
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.15169
0.14279
0.14324
0.14324
1.10
29.49
6169
122251
116082
5.0
95.90
0.310
0.015
RANDOM
1
THROUGHOUT
0
0
MOLECULAR REPLACEMENT
0.028
0.027
0.80
0.80
1.40
1LDG
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
1.10
29.49
295
2734
56
0
2383
0.007
0.022
2506
0.002
0.020
2334
1.287
1.992
3397
1.305
3.000
5467
5.238
5.000
314
0.105
0.200
402
0.004
0.020
2709
0.002
0.020
431
0.214
0.200
529
0.238
0.200
2651
0.084
0.200
1415
0.087
0.200
196
0.230
0.200
22
0.314
0.200
100
0.107
0.200
31
0.559
1.500
1560
0.982
2.000
2529
1.384
3.000
946
2.225
4.500
868
0.655
2.000
2506
1.610
2.000
295
1.043
2.000
2465
0.228
0.222
1.129
407
7617
8024
20
1.1
30
1T2D
127550
127177
2
2
0.072
1
22.5
5.6
99.7
1.10
1.12
2.1
6036
0.473
1
95.6
refinement
REFMAC
5.1.24
data reduction
DENZO
data scaling
SCALEPACK
phasing
AMoRE
Plasmodium falciparum lactate dehydrogenase complexed with NAD+ and oxalate
1
N
N
2
N
N
3
N
N
4
N
N
5
N
N
The biological assembly is a tetramer generated from the monomer
in the asymmetric unit by the operations:
A
GLY
12
A
GLY
13
HELX_P
A
LYS
25
A
LYS
26
1
1
14
A
ASN
38
A
ASN
39
HELX_P
A
HIS
49
A
HIS
50
1
2
12
A
HIS
49
A
HIS
50
HELX_P
A
TYR
55
A
TYR
56
1
3
7
A
THR
65
A
THR
66
HELX_P
A
ALA
70
A
ALA
71
5
4
6
A
ASN
93
A
ASN
94
HELX_P
A
ASP
96
A
ASP
97
5
5
4
A
LEU
97
A
LEU
98
HELX_P
A
CYS
116
A
CYS
117
1
6
20
A
PRO
127
A
PRO
128
HELX_P
A
GLY
140
A
GLY
141
1
7
14
A
PRO
142
A
PRO
143
HELX_P
A
ASN
144
A
ASN
145
5
8
3
A
GLY
150
A
GLY
151
HELX_P
A
ASN
167
A
ASN
168
1
9
18
A
CYS
169
A
CYS
170
HELX_P
A
ARG
171
A
ARG
172
5
10
3
A
LYS
189
A
LYS
190
HELX_P
A
TYR
191
A
TYR
192
5
11
3
A
LEU
199
A
LEU
200
HELX_P
A
ASN
205
A
ASN
206
1
12
7
A
SER
209
A
SER
210
HELX_P
A
ASN
222
A
ASN
223
1
13
14
A
ASN
222
A
ASN
223
HELX_P
A
HIS
231
A
HIS
232
1
14
10
A
TYR
235
A
TYR
236
HELX_P
A
LYS
251
A
LYS
252
1
15
17
A
GLN
266
A
GLN
267
HELX_P
A
GLY
268
A
GLY
269
5
16
3
A
ASN
294
A
ASN
295
HELX_P
A
ALA
315
A
ALA
316
1
17
22
OXIDOREDUCTASE
Ternary complex, OXIDOREDUCTASE
A
ALA
1
A
ALA
2
1
A
PRO
2
A
PRO
3
-9.88
A
ASN
126
A
ASN
127
1
A
PRO
127
A
PRO
128
-4.49
LDH1_PLAFD
UNP
1
1
Q27743
MAPKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTYDDLAGADVVIVTA
GFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTNPVDVMVQLLHQHSGVPKNKIIGLGGVLDTSRLK
YYISQKLNVCPRDVNAHIVGAHGNKMVLLKRYITVGGIPLQEFINNKLISDAELEAIFDRTVNTALEIVNLHASPYVAPA
AAIIEMAESYLKDLKKVLICSTLLEGQYGHSDIFGGTPVVLGANGVEQVIELQLNSEEKAKFDEAIAETKRMKALA
1
316
1T2D
0
315
Q27743
A
1
1
316
1
expression tag
HIS
316
1T2D
A
Q27743
UNP
317
1
expression tag
HIS
317
1T2D
A
Q27743
UNP
318
1
expression tag
HIS
318
1T2D
A
Q27743
UNP
319
1
expression tag
HIS
319
1T2D
A
Q27743
UNP
320
1
expression tag
HIS
320
1T2D
A
Q27743
UNP
321
1
expression tag
HIS
321
1T2D
A
Q27743
UNP
322
6
3
2
3
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
VAL
60
A
VAL
61
A
SER
63
A
SER
64
A
ASP
29
A
ASP
30
A
PHE
33
A
PHE
34
A
LYS
5
A
LYS
6
A
VAL
9
A
VAL
10
A
VAL
74
A
VAL
75
A
VAL
77
A
VAL
78
A
PHE
120
A
PHE
121
A
VAL
123
A
VAL
124
A
ILE
146
A
ILE
147
A
GLY
148
A
GLY
149
A
VAL
173
A
VAL
174
A
ASN
174
A
ASN
175
A
THR
193
A
THR
194
A
VAL
194
A
VAL
195
A
ILE
197
A
ILE
198
A
PRO
198
A
PRO
199
A
ILE
177
A
ILE
178
A
VAL
178
A
VAL
179
A
VAL
186
A
VAL
187
A
LEU
187
A
LEU
188
A
LYS
255
A
LYS
256
A
GLU
264
A
GLU
265
A
SER
270
A
SER
271
A
GLY
281
A
GLY
282
A
GLY
284
A
GLY
285
A
VAL
288
A
VAL
289
BINDING SITE FOR RESIDUE OXL A 322
A
OXL
322
Software
9
BINDING SITE FOR RESIDUE NAD A 323
A
NAD
323
Software
35
BINDING SITE FOR RESIDUE GOL A 324
A
GOL
324
Software
10
A
ARG
94
A
ARG
95
9
1_555
A
ASN
126
A
ASN
127
9
1_555
A
LEU
153
A
LEU
154
9
1_555
A
ARG
157
A
ARG
158
9
1_555
A
HIS
181
A
HIS
182
9
1_555
A
ALA
224
A
ALA
225
9
1_555
A
PRO
234
A
PRO
235
9
1_555
A
NAD
323
C
NAD
9
1_555
A
HOH
404
E
HOH
9
1_555
A
GLY
12
A
GLY
13
35
1_555
A
MET
13
A
MET
14
35
1_555
A
ILE
14
A
ILE
15
35
1_555
A
PHE
33
A
PHE
34
35
1_555
A
ASP
34
A
ASP
35
35
1_555
A
ILE
35
A
ILE
36
35
1_555
A
VAL
36
A
VAL
37
35
1_555
A
TYR
66
A
TYR
67
35
1_555
A
THR
78
A
THR
79
35
1_555
A
ALA
79
A
ALA
80
35
1_555
A
GLY
80
A
GLY
81
35
1_555
A
PHE
81
A
PHE
82
35
1_555
A
THR
82
A
THR
83
35
1_555
A
LEU
97
A
LEU
98
35
1_555
A
ASN
101
A
ASN
102
35
1_555
A
VAL
124
A
VAL
125
35
1_555
A
THR
125
A
THR
126
35
1_555
A
ASN
126
A
ASN
127
35
1_555
A
VAL
128
A
VAL
129
35
1_555
A
LEU
149
A
LEU
150
35
1_555
A
LEU
153
A
LEU
154
35
1_555
A
HIS
181
A
HIS
182
35
1_555
A
PRO
234
A
PRO
235
35
1_555
A
OXL
322
B
OXL
35
1_555
A
HOH
371
E
HOH
35
1_555
A
HOH
377
E
HOH
35
1_555
A
HOH
404
E
HOH
35
1_555
A
HOH
413
E
HOH
35
1_555
A
HOH
441
E
HOH
35
1_555
A
HOH
463
E
HOH
35
1_555
A
HOH
494
E
HOH
35
1_555
A
HOH
534
E
HOH
35
1_555
A
HOH
551
E
HOH
35
1_555
A
HOH
607
E
HOH
35
1_555
A
HOH
617
E
HOH
35
1_555
A
THR
155
A
THR
156
10
1_555
A
LYS
159
A
LYS
160
10
1_555
A
ASN
174
A
ASN
175
10
1_555
A
ALA
175
A
ALA
176
10
1_555
A
GLY
195
A
GLY
196
10
4_565
A
VAL
256
A
VAL
257
10
1_555
A
ILE
258
A
ILE
259
10
1_555
A
HOH
376
E
HOH
10
1_555
A
HOH
410
E
HOH
10
1_555
A
HOH
508
E
HOH
10
1_555
23
I 2 2 2