0.012755
0.007364
0.000000
0.000000
0.014728
0.000000
0.000000
0.000000
0.028490
0.00000
0.00000
0.00000
RESIDUE 76 IS A CIS PROLINE.
Nikkola, M.
Langsetmo, K.
Fuchs, J.A.
Eklund, H.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
78.400
78.400
35.100
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Cu 2
63.546
COPPER (II) ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be Published
0353
Crystal Structure of a Mutant Escherichia Coli Thioredoxin with an Arginine Insertion in the Active Site
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
212
167
The Refined Structure of E. Coli Thioredoxin
1990
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
11844.580
THIOREDOXIN
1
man
polymer
63.546
COPPER (II) ION
1
syn
non-polymer
18.015
water
26
nat
water
no
no
SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGRPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLL
LFKNGEVAATKVGALSKGQLKEFLDANLA
SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGRPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLL
LFKNGEVAATKVGALSKGQLKEFLDANLA
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Escherichia
sample
562
Escherichia coli
PLASMID
2.63
53.19
pdbx_database_status
struct_conf
struct_conf_type
repository
Initial release
Version format compliance
Version format compliance
Derived calculations
Other
1
0
1993-10-31
1
1
2008-03-24
1
2
2011-07-13
1
3
2017-11-29
_pdbx_database_status.process_site
Y
BNL
1993-01-28
REL
CU
COPPER (II) ION
HOH
water
CU
109
2
CU
CU
109
A
HOH
110
3
HOH
HOH
110
A
HOH
111
3
HOH
HOH
111
A
HOH
112
3
HOH
HOH
112
A
HOH
113
3
HOH
HOH
113
A
HOH
114
3
HOH
HOH
114
A
HOH
115
3
HOH
HOH
115
A
HOH
116
3
HOH
HOH
116
A
HOH
117
3
HOH
HOH
117
A
HOH
118
3
HOH
HOH
118
A
HOH
119
3
HOH
HOH
119
A
HOH
120
3
HOH
HOH
120
A
HOH
121
3
HOH
HOH
121
A
HOH
122
3
HOH
HOH
122
A
HOH
123
3
HOH
HOH
123
A
HOH
124
3
HOH
HOH
124
A
HOH
125
3
HOH
HOH
125
A
HOH
126
3
HOH
HOH
126
A
HOH
127
3
HOH
HOH
127
A
HOH
128
3
HOH
HOH
128
A
HOH
129
3
HOH
HOH
129
A
HOH
130
3
HOH
HOH
130
A
HOH
131
3
HOH
HOH
131
A
HOH
132
3
HOH
HOH
132
A
HOH
133
3
HOH
HOH
133
A
HOH
134
3
HOH
HOH
134
A
HOH
135
3
HOH
HOH
135
A
SER
1
n
1
SER
1
A
ASP
2
n
2
ASP
2
A
LYS
3
n
3
LYS
3
A
ILE
4
n
4
ILE
4
A
ILE
5
n
5
ILE
5
A
HIS
6
n
6
HIS
6
A
LEU
7
n
7
LEU
7
A
THR
8
n
8
THR
8
A
ASP
9
n
9
ASP
9
A
ASP
10
n
10
ASP
10
A
SER
11
n
11
SER
11
A
PHE
12
n
12
PHE
12
A
ASP
13
n
13
ASP
13
A
THR
14
n
14
THR
14
A
ASP
15
n
15
ASP
15
A
VAL
16
n
16
VAL
16
A
LEU
17
n
17
LEU
17
A
LYS
18
n
18
LYS
18
A
ALA
19
n
19
ALA
19
A
ASP
20
n
20
ASP
20
A
GLY
21
n
21
GLY
21
A
ALA
22
n
22
ALA
22
A
ILE
23
n
23
ILE
23
A
LEU
24
n
24
LEU
24
A
VAL
25
n
25
VAL
25
A
ASP
26
n
26
ASP
26
A
PHE
27
n
27
PHE
27
A
TRP
28
n
28
TRP
28
A
ALA
29
n
29
ALA
29
A
GLU
30
n
30
GLU
30
A
TRP
31
n
31
TRP
31
A
CYS
32
n
32
CYS
32
A
GLY
33
n
33
GLY
33
A
ARG
33
n
34
A
ARG
33
A
PRO
34
n
35
PRO
34
A
CYS
35
n
36
CYS
35
A
LYS
36
n
37
LYS
36
A
MET
37
n
38
MET
37
A
ILE
38
n
39
ILE
38
A
ALA
39
n
40
ALA
39
A
PRO
40
n
41
PRO
40
A
ILE
41
n
42
ILE
41
A
LEU
42
n
43
LEU
42
A
ASP
43
n
44
ASP
43
A
GLU
44
n
45
GLU
44
A
ILE
45
n
46
ILE
45
A
ALA
46
n
47
ALA
46
A
ASP
47
n
48
ASP
47
A
GLU
48
n
49
GLU
48
A
TYR
49
n
50
TYR
49
A
GLN
50
n
51
GLN
50
A
GLY
51
n
52
GLY
51
A
LYS
52
n
53
LYS
52
A
LEU
53
n
54
LEU
53
A
THR
54
n
55
THR
54
A
VAL
55
n
56
VAL
55
A
ALA
56
n
57
ALA
56
A
LYS
57
n
58
LYS
57
A
LEU
58
n
59
LEU
58
A
ASN
59
n
60
ASN
59
A
ILE
60
n
61
ILE
60
A
ASP
61
n
62
ASP
61
A
GLN
62
n
63
GLN
62
A
ASN
63
n
64
ASN
63
A
PRO
64
n
65
PRO
64
A
GLY
65
n
66
GLY
65
A
THR
66
n
67
THR
66
A
ALA
67
n
68
ALA
67
A
PRO
68
n
69
PRO
68
A
LYS
69
n
70
LYS
69
A
TYR
70
n
71
TYR
70
A
GLY
71
n
72
GLY
71
A
ILE
72
n
73
ILE
72
A
ARG
73
n
74
ARG
73
A
GLY
74
n
75
GLY
74
A
ILE
75
n
76
ILE
75
A
PRO
76
n
77
PRO
76
A
THR
77
n
78
THR
77
A
LEU
78
n
79
LEU
78
A
LEU
79
n
80
LEU
79
A
LEU
80
n
81
LEU
80
A
PHE
81
n
82
PHE
81
A
LYS
82
n
83
LYS
82
A
ASN
83
n
84
ASN
83
A
GLY
84
n
85
GLY
84
A
GLU
85
n
86
GLU
85
A
VAL
86
n
87
VAL
86
A
ALA
87
n
88
ALA
87
A
ALA
88
n
89
ALA
88
A
THR
89
n
90
THR
89
A
LYS
90
n
91
LYS
90
A
VAL
91
n
92
VAL
91
A
GLY
92
n
93
GLY
92
A
ALA
93
n
94
ALA
93
A
LEU
94
n
95
LEU
94
A
SER
95
n
96
SER
95
A
LYS
96
n
97
LYS
96
A
GLY
97
n
98
GLY
97
A
GLN
98
n
99
GLN
98
A
LEU
99
n
100
LEU
99
A
LYS
100
n
101
LYS
100
A
GLU
101
n
102
GLU
101
A
PHE
102
n
103
PHE
102
A
LEU
103
n
104
LEU
103
A
ASP
104
n
105
ASP
104
A
ALA
105
n
106
ALA
105
A
ASN
106
n
107
ASN
106
A
LEU
107
n
108
LEU
107
A
ALA
108
n
109
ALA
108
A
author_defined_assembly
1
monomeric
A
SER
1
A
N
SER
1
1_555
A
CU
109
B
CU
CU
1_555
A
ASP
2
A
N
ASP
2
1_555
74.1
A
SER
1
A
N
SER
1
1_555
A
CU
109
B
CU
CU
1_555
A
ASP
2
A
OD1
ASP
2
1_555
166.4
A
ASP
2
A
N
ASP
2
1_555
A
CU
109
B
CU
CU
1_555
A
ASP
2
A
OD1
ASP
2
1_555
93.2
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
5
A
N
ILE
5
A
O
VAL
55
A
O
VAL
56
A
N
THR
54
A
N
THR
55
A
O
ALA
22
A
O
ALA
22
A
N
PHE
27
A
N
PHE
27
A
O
THR
77
A
O
THR
78
A
N
LEU
78
A
N
LEU
79
A
O
LYS
90
A
O
LYS
91
1
6.25
0.80
106.30
112.55
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
31
31
31
N
1
-5.23
0.80
107.30
102.07
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
31
31
31
N
1
A
A
NE2
CD2
HIS
HIS
6
6
-0.076
0.011
1.373
1.297
N
1
A
GLN
50
-38.76
125.56
0.173
0.173
2.3
1
2.3
26
860
1
0
833
0.016
3.28
model building
X-PLOR
refinement
X-PLOR
phasing
X-PLOR
THIOREDOXIN MUTANT WITH ARG INSERTED BETWEEN GLY 33 AND PRO 34 (33R34)
CRYSTAL STRUCTURE OF A MUTANT ESCHERICHIA COLI THIOREDOXIN WITH AN ARGININE INSERTION IN THE ACTIVE SITE
1
N
N
2
N
N
3
N
N
A
SER
11
A
SER
11
HELX_P
A
LEU
17
A
LEU
17
1
A1
7
A
CYS
32
A
CYS
32
HELX_P
A
TYR
49
A
TYR
50
1
A2
19
A
ASN
59
A
ASN
60
HELX_P
A
ASN
63
A
ASN
64
1
A3
5
A
SER
95
A
SER
96
HELX_P
A
LEU
107
A
LEU
108
1
A4
13
disulf
2.015
A
CYS
32
A
SG
CYS
32
1_555
A
CYS
35
A
SG
CYS
36
1_555
metalc
2.603
A
CU
109
B
CU
CU
1_555
A
SER
1
A
N
SER
1
1_555
metalc
2.088
A
CU
109
B
CU
CU
1_555
A
ASP
2
A
N
ASP
2
1_555
metalc
1.794
A
CU
109
B
CU
CU
1_555
A
ASP
2
A
OD1
ASP
2
1_555
ELECTRON TRANSPORT
ELECTRON TRANSPORT
A
ILE
75
A
ILE
76
1
A
PRO
76
A
PRO
77
-7.00
THIO_ECOLI
UNP
1
1
P0AA25
SDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLL
FKNGEVAATKVGALSKGQLKEFLDANLA
1
108
1THO
1
108
P0AA25
A
1
1
109
1
INSERTION
ARG
33
1THO
A
A
P0AA25
UNP
34
5
parallel
parallel
anti-parallel
anti-parallel
A
LYS
3
A
LYS
3
A
THR
8
A
THR
8
A
LEU
53
A
LEU
54
A
ASN
59
A
ASN
60
A
GLY
21
A
GLY
21
A
TRP
28
A
TRP
28
A
PRO
76
A
PRO
77
A
LYS
82
A
LYS
83
A
VAL
86
A
VAL
87
A
GLY
92
A
GLY
93
BINDING SITE FOR RESIDUE CU A 109
Software
2
A
SER
1
A
SER
1
2
1_555
A
ASP
2
A
ASP
2
2
1_555
169
P 61