0.008496
0.000000
0.000594
0.000000
0.022272
0.000000
0.000000
0.000000
0.026380
0.00000
0.00000
0.00000
CIS PROLINE - PRO 84
Ko, T.-P.
Day, J.
Greenwood, A.
McPherson, A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
94.00
90.00
117.700
44.900
38.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
50
813
825
10.1107/S0907444994005512
15299348
Structures of three crystal forms of the sweet protein thaumatin.
1994
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
22243.119
THAUMATIN ISOFORM B
1
man
polymer
no
no
ATFEIVNRCSYTVWAAASKGDAALDAGGRQLNSGESWTINVEPGTKGGKIWARTDCYFDDSGSGICKTGDCGGLLRCKRF
GRPPTTLAEFSLNQYGKDYIDISNIKGFNVPMDFSPTTRGCRGVRCAADIVGQCPAKLKAPGGGCNDACTVFQTSEYCCT
TGKCGPTEYSRFFKRLCPDAFSYVLDKPTTVTCPGSSNYRVTFCPTA
ATFEIVNRCSYTVWAAASKGDAALDAGGRQLNSGESWTINVEPGTKGGKIWARTDCYFDDSGSGICKTGDCGGLLRCKRF
GRPPTTLAEFSLNQYGKDYIDISNIKGFNVPMDFSPTTRGCRGVRCAADIVGQCPAKLKAPGGGCNDACTVFQTSEYCCT
TGKCGPTEYSRFFKRLCPDAFSYVLDKPTTVTCPGSSNYRVTFCPTA
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
miracle fruit
Thaumatococcus
sample
4621
Thaumatococcus daniellii
2.25
45.34
repository
Initial release
Version format compliance
Version format compliance
1
0
1994-12-20
1
1
2008-03-24
1
2
2011-07-13
Y
1994-06-10
REL
REL
CROSS REFERENCE TO SEQUENCE DATABASE
SWISS-PROT ENTRY NAME PDB ENTRY CHAIN NAME
THM1_THADA
SEQUENCE ADVISORY NOTICE
DIFFERENCE BETWEEN SWISS-PROT AND PDB SEQUENCE.
SWISS-PROT ENTRY NAME: THM1_THADA
SWISS-PROT RESIDUE PDB SEQRES
NAME NUMBER NAME CHAIN SEQ/INSERT CODE
ASN 56 LYS 56
ASN 113 ASP 113
ALA
1
n
1
ALA
1
A
THR
2
n
2
THR
2
A
PHE
3
n
3
PHE
3
A
GLU
4
n
4
GLU
4
A
ILE
5
n
5
ILE
5
A
VAL
6
n
6
VAL
6
A
ASN
7
n
7
ASN
7
A
ARG
8
n
8
ARG
8
A
CYS
9
n
9
CYS
9
A
SER
10
n
10
SER
10
A
TYR
11
n
11
TYR
11
A
THR
12
n
12
THR
12
A
VAL
13
n
13
VAL
13
A
TRP
14
n
14
TRP
14
A
ALA
15
n
15
ALA
15
A
ALA
16
n
16
ALA
16
A
ALA
17
n
17
ALA
17
A
SER
18
n
18
SER
18
A
LYS
19
n
19
LYS
19
A
GLY
20
n
20
GLY
20
A
ASP
21
n
21
ASP
21
A
ALA
22
n
22
ALA
22
A
ALA
23
n
23
ALA
23
A
LEU
24
n
24
LEU
24
A
ASP
25
n
25
ASP
25
A
ALA
26
n
26
ALA
26
A
GLY
27
n
27
GLY
27
A
GLY
28
n
28
GLY
28
A
ARG
29
n
29
ARG
29
A
GLN
30
n
30
GLN
30
A
LEU
31
n
31
LEU
31
A
ASN
32
n
32
ASN
32
A
SER
33
n
33
SER
33
A
GLY
34
n
34
GLY
34
A
GLU
35
n
35
GLU
35
A
SER
36
n
36
SER
36
A
TRP
37
n
37
TRP
37
A
THR
38
n
38
THR
38
A
ILE
39
n
39
ILE
39
A
ASN
40
n
40
ASN
40
A
VAL
41
n
41
VAL
41
A
GLU
42
n
42
GLU
42
A
PRO
43
n
43
PRO
43
A
GLY
44
n
44
GLY
44
A
THR
45
n
45
THR
45
A
LYS
46
n
46
LYS
46
A
GLY
47
n
47
GLY
47
A
GLY
48
n
48
GLY
48
A
LYS
49
n
49
LYS
49
A
ILE
50
n
50
ILE
50
A
TRP
51
n
51
TRP
51
A
ALA
52
n
52
ALA
52
A
ARG
53
n
53
ARG
53
A
THR
54
n
54
THR
54
A
ASP
55
n
55
ASP
55
A
CYS
56
n
56
CYS
56
A
TYR
57
n
57
TYR
57
A
PHE
58
n
58
PHE
58
A
ASP
59
n
59
ASP
59
A
ASP
60
n
60
ASP
60
A
SER
61
n
61
SER
61
A
GLY
62
n
62
GLY
62
A
SER
63
n
63
SER
63
A
GLY
64
n
64
GLY
64
A
ILE
65
n
65
ILE
65
A
CYS
66
n
66
CYS
66
A
LYS
67
n
67
LYS
67
A
THR
68
n
68
THR
68
A
GLY
69
n
69
GLY
69
A
ASP
70
n
70
ASP
70
A
CYS
71
n
71
CYS
71
A
GLY
72
n
72
GLY
72
A
GLY
73
n
73
GLY
73
A
LEU
74
n
74
LEU
74
A
LEU
75
n
75
LEU
75
A
ARG
76
n
76
ARG
76
A
CYS
77
n
77
CYS
77
A
LYS
78
n
78
LYS
78
A
ARG
79
n
79
ARG
79
A
PHE
80
n
80
PHE
80
A
GLY
81
n
81
GLY
81
A
ARG
82
n
82
ARG
82
A
PRO
83
n
83
PRO
83
A
PRO
84
n
84
PRO
84
A
THR
85
n
85
THR
85
A
THR
86
n
86
THR
86
A
LEU
87
n
87
LEU
87
A
ALA
88
n
88
ALA
88
A
GLU
89
n
89
GLU
89
A
PHE
90
n
90
PHE
90
A
SER
91
n
91
SER
91
A
LEU
92
n
92
LEU
92
A
ASN
93
n
93
ASN
93
A
GLN
94
n
94
GLN
94
A
TYR
95
n
95
TYR
95
A
GLY
96
n
96
GLY
96
A
LYS
97
n
97
LYS
97
A
ASP
98
n
98
ASP
98
A
TYR
99
n
99
TYR
99
A
ILE
100
n
100
ILE
100
A
ASP
101
n
101
ASP
101
A
ILE
102
n
102
ILE
102
A
SER
103
n
103
SER
103
A
ASN
104
n
104
ASN
104
A
ILE
105
n
105
ILE
105
A
LYS
106
n
106
LYS
106
A
GLY
107
n
107
GLY
107
A
PHE
108
n
108
PHE
108
A
ASN
109
n
109
ASN
109
A
VAL
110
n
110
VAL
110
A
PRO
111
n
111
PRO
111
A
MET
112
n
112
MET
112
A
ASP
113
n
113
ASP
113
A
PHE
114
n
114
PHE
114
A
SER
115
n
115
SER
115
A
PRO
116
n
116
PRO
116
A
THR
117
n
117
THR
117
A
THR
118
n
118
THR
118
A
ARG
119
n
119
ARG
119
A
GLY
120
n
120
GLY
120
A
CYS
121
n
121
CYS
121
A
ARG
122
n
122
ARG
122
A
GLY
123
n
123
GLY
123
A
VAL
124
n
124
VAL
124
A
ARG
125
n
125
ARG
125
A
CYS
126
n
126
CYS
126
A
ALA
127
n
127
ALA
127
A
ALA
128
n
128
ALA
128
A
ASP
129
n
129
ASP
129
A
ILE
130
n
130
ILE
130
A
VAL
131
n
131
VAL
131
A
GLY
132
n
132
GLY
132
A
GLN
133
n
133
GLN
133
A
CYS
134
n
134
CYS
134
A
PRO
135
n
135
PRO
135
A
ALA
136
n
136
ALA
136
A
LYS
137
n
137
LYS
137
A
LEU
138
n
138
LEU
138
A
LYS
139
n
139
LYS
139
A
ALA
140
n
140
ALA
140
A
PRO
141
n
141
PRO
141
A
GLY
142
n
142
GLY
142
A
GLY
143
n
143
GLY
143
A
GLY
144
n
144
GLY
144
A
CYS
145
n
145
CYS
145
A
ASN
146
n
146
ASN
146
A
ASP
147
n
147
ASP
147
A
ALA
148
n
148
ALA
148
A
CYS
149
n
149
CYS
149
A
THR
150
n
150
THR
150
A
VAL
151
n
151
VAL
151
A
PHE
152
n
152
PHE
152
A
GLN
153
n
153
GLN
153
A
THR
154
n
154
THR
154
A
SER
155
n
155
SER
155
A
GLU
156
n
156
GLU
156
A
TYR
157
n
157
TYR
157
A
CYS
158
n
158
CYS
158
A
CYS
159
n
159
CYS
159
A
THR
160
n
160
THR
160
A
THR
161
n
161
THR
161
A
GLY
162
n
162
GLY
162
A
LYS
163
n
163
LYS
163
A
CYS
164
n
164
CYS
164
A
GLY
165
n
165
GLY
165
A
PRO
166
n
166
PRO
166
A
THR
167
n
167
THR
167
A
GLU
168
n
168
GLU
168
A
TYR
169
n
169
TYR
169
A
SER
170
n
170
SER
170
A
ARG
171
n
171
ARG
171
A
PHE
172
n
172
PHE
172
A
PHE
173
n
173
PHE
173
A
LYS
174
n
174
LYS
174
A
ARG
175
n
175
ARG
175
A
LEU
176
n
176
LEU
176
A
CYS
177
n
177
CYS
177
A
PRO
178
n
178
PRO
178
A
ASP
179
n
179
ASP
179
A
ALA
180
n
180
ALA
180
A
PHE
181
n
181
PHE
181
A
SER
182
n
182
SER
182
A
TYR
183
n
183
TYR
183
A
VAL
184
n
184
VAL
184
A
LEU
185
n
185
LEU
185
A
ASP
186
n
186
ASP
186
A
LYS
187
n
187
LYS
187
A
PRO
188
n
188
PRO
188
A
THR
189
n
189
THR
189
A
THR
190
n
190
THR
190
A
VAL
191
n
191
VAL
191
A
THR
192
n
192
THR
192
A
CYS
193
n
193
CYS
193
A
PRO
194
n
194
PRO
194
A
GLY
195
n
195
GLY
195
A
SER
196
n
196
SER
196
A
SER
197
n
197
SER
197
A
ASN
198
n
198
ASN
198
A
TYR
199
n
199
TYR
199
A
ARG
200
n
200
ARG
200
A
VAL
201
n
201
VAL
201
A
THR
202
n
202
THR
202
A
PHE
203
n
203
PHE
203
A
CYS
204
n
204
CYS
204
A
PRO
205
n
205
PRO
205
A
THR
206
n
206
THR
206
A
ALA
207
n
207
ALA
207
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
ILE
39
A
O
ILE
39
A
N
PHE
3
A
N
PHE
3
A
O
THR
2
A
O
THR
2
A
N
TYR
199
A
N
TYR
199
A
N
THR
202
A
N
THR
202
A
O
ASP
113
A
O
ASP
113
A
O
PHE
114
A
O
PHE
114
A
N
VAL
124
A
N
VAL
124
A
O
GLY
27
A
O
GLY
27
A
N
ALA
17
A
N
ALA
17
A
O
SER
18
A
O
SER
18
A
N
LYS
49
A
N
LYS
49
A
N
TYR
57
A
N
TYR
57
A
O
ILE
65
A
O
ILE
65
A
O
GLY
27
A
O
GLY
27
A
N
ALA
17
A
N
ALA
17
A
O
SER
18
A
O
SER
18
A
N
LYS
49
A
N
LYS
49
A
N
ILE
50
A
N
ILE
50
A
O
ALA
88
A
O
ALA
88
A
O
LEU
87
A
O
LEU
87
A
N
SER
103
A
N
SER
103
A
O
ILE
100
A
O
ILE
100
A
N
VAL
191
A
N
VAL
191
1
A
A
O
N
PHE
CYS
173
177
2.19
1
A
A
OG
OD2
SER
ASP
182
186
2.19
1
3.61
0.50
120.30
123.91
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
8
8
8
N
1
9.26
1.50
110.10
119.36
A
A
A
CB
CA
C
ALA
ALA
ALA
16
16
16
N
1
12.42
1.40
110.10
122.52
A
A
A
N
CA
CB
ALA
ALA
ALA
22
22
22
N
1
5.87
0.90
118.30
124.17
A
A
A
CB
CG
OD1
ASP
ASP
ASP
25
25
25
N
1
-6.56
0.90
118.30
111.74
A
A
A
CB
CG
OD2
ASP
ASP
ASP
25
25
25
N
1
-6.30
0.90
118.30
112.00
A
A
A
CB
CG
OD1
ASP
ASP
ASP
55
55
55
N
1
6.62
0.90
118.30
124.92
A
A
A
CB
CG
OD2
ASP
ASP
ASP
55
55
55
N
1
-6.47
0.90
118.30
111.83
A
A
A
CB
CG
OD1
ASP
ASP
ASP
59
59
59
N
1
-6.35
0.90
118.30
111.95
A
A
A
CB
CG
OD1
ASP
ASP
ASP
70
70
70
N
1
5.85
0.90
118.30
124.15
A
A
A
CB
CG
OD2
ASP
ASP
ASP
70
70
70
N
1
3.43
0.50
120.30
123.73
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
82
82
82
N
1
5.70
0.90
118.30
124.00
A
A
A
CB
CG
OD1
ASP
ASP
ASP
101
101
101
N
1
-6.20
0.90
118.30
112.10
A
A
A
CB
CG
OD2
ASP
ASP
ASP
101
101
101
N
1
3.49
0.50
120.30
123.79
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
119
119
119
N
1
-11.08
1.80
114.00
102.92
A
A
A
CA
CB
SG
CYS
CYS
CYS
121
121
121
N
1
-5.62
0.90
118.30
112.68
A
A
A
CB
CG
OD1
ASP
ASP
ASP
147
147
147
N
1
3.12
0.50
120.30
123.42
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
175
175
175
N
1
-9.93
0.90
118.30
108.37
A
A
A
CB
CG
OD1
ASP
ASP
ASP
179
179
179
N
1
-17.16
2.10
128.40
111.24
A
A
A
C
N
CD
LYS
PRO
PRO
187
188
188
Y
1
-13.63
2.10
128.40
114.77
A
A
A
C
N
CD
CYS
PRO
PRO
193
194
194
Y
1
A
A
CD
OE2
GLU
GLU
4
4
0.080
0.011
1.252
1.332
N
1
A
A
CD
OE1
GLU
GLU
35
35
0.072
0.011
1.252
1.324
N
1
A
A
CD
OE1
GLU
GLU
42
42
0.085
0.011
1.252
1.337
N
1
A
A
CG
OD1
ASP
ASP
60
60
0.173
0.023
1.249
1.422
N
1
A
A
CD
OE2
GLU
GLU
156
156
0.074
0.011
1.252
1.326
N
1
A
A
CD
OE2
GLU
GLU
168
168
0.075
0.011
1.252
1.327
N
1
A
ALA
17
-160.76
107.00
1
A
ASP
25
62.98
-118.98
1
A
ARG
29
-128.52
-163.53
1
A
ASP
55
58.93
83.99
1
A
ASP
59
-75.81
-157.63
1
A
SER
61
-167.46
16.09
1
A
SER
63
-105.43
-160.23
1
A
LEU
75
-25.50
-62.42
1
A
CYS
77
-36.29
120.39
1
A
TYR
95
68.00
75.78
1
A
ASP
101
174.73
146.36
1
A
ILE
105
-48.57
-18.76
1
A
ASN
109
-153.22
8.57
1
A
VAL
110
-173.33
134.05
1
A
ALA
136
-33.99
-11.27
1
A
GLU
156
-34.05
-83.20
1
A
THR
160
-56.15
34.02
1
A
THR
161
-144.12
-53.39
1
A
CYS
164
-122.83
-168.70
1
A
LEU
185
-69.00
30.30
1
A
LYS
187
-50.92
104.28
1
A
PRO
188
-36.48
141.15
1
A
SER
196
56.90
18.59
1
A
CYS
204
71.92
67.10
1
A
PRO
205
-59.57
-177.10
0.184
2.6
8.0
4622
1
3.0
2.6
8.0
0
1552
0
0
1552
0.020
2.95
refinement
TNT
THAUMATIN ISOFORM B (MONOCLINIC CRYSTAL FORM)
THE STRUCTURES OF THREE CRYSTAL FORMS OF THE SWEET PROTEIN THAUMATIN
1
N
N
A
ASP
129
A
ASP
129
HELX_P
A
CYS
134
A
CYS
134
1
1
6
A
ASP
147
A
ASP
147
HELX_P
A
GLN
153
A
GLN
153
1
2
7
A
THR
154
A
THR
154
HELX_P
A
CYS
159
A
CYS
159
1
3
6
A
TYR
169
A
TYR
169
HELX_P
A
CYS
177
A
CYS
177
1
4
9
disulf
2.022
A
CYS
9
A
SG
CYS
9
1_555
A
CYS
204
A
SG
CYS
204
1_555
disulf
1.978
A
CYS
56
A
SG
CYS
56
1_555
A
CYS
66
A
SG
CYS
66
1_555
disulf
2.028
A
CYS
71
A
SG
CYS
71
1_555
A
CYS
77
A
SG
CYS
77
1_555
disulf
1.966
A
CYS
121
A
SG
CYS
121
1_555
A
CYS
193
A
SG
CYS
193
1_555
disulf
2.011
A
CYS
126
A
SG
CYS
126
1_555
A
CYS
177
A
SG
CYS
177
1_555
disulf
2.075
A
CYS
134
A
SG
CYS
134
1_555
A
CYS
145
A
SG
CYS
145
1_555
disulf
2.143
A
CYS
149
A
SG
CYS
149
1_555
A
CYS
158
A
SG
CYS
158
1_555
disulf
2.037
A
CYS
159
A
SG
CYS
159
1_555
A
CYS
164
A
SG
CYS
164
1_555
SWEET TASTING PROTEIN
SWEET TASTING PROTEIN
A
PRO
83
A
PRO
83
1
A
PRO
84
A
PRO
84
1.46
THM1_THADA
UNP
1
1
P02883
ATFEIVNRCSYTVWAAASKGDAALDAGGRQLNSGESWTINVEPGTNGGKIWARTDCYFDDSGSGICKTGDCGGLLRCKRF
GRPPTTLAEFSLNQYGKDYIDISNIKGFNVPMNFSPTTRGCRGVRCAADIVGQCPAKLKAPGGGCNDACTVFQTSEYCCT
TGKCGPTEYSRFFKRLCPDAFSYVLDKPTTVTCPGSSNYRVTFCPTA
1
207
1THU
1
207
P02883
A
1
1
207
1
ASN
CONFLICT
LYS
46
1THU
A
P02883
UNP
46
46
1
ASN
CONFLICT
ASP
113
1THU
A
P02883
UNP
113
113
5
4
5
2
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLU
35
A
GLU
35
A
ASN
40
A
ASN
40
A
THR
2
A
THR
2
A
ASN
7
A
ASN
7
A
TYR
199
A
TYR
199
A
PHE
203
A
PHE
203
A
MET
112
A
MET
112
A
PRO
116
A
PRO
116
A
VAL
124
A
VAL
124
A
CYS
126
A
CYS
126
A
ALA
23
A
ALA
23
A
GLY
28
A
GLY
28
A
TRP
14
A
TRP
14
A
SER
18
A
SER
18
A
GLY
48
A
GLY
48
A
TYR
57
A
TYR
57
A
ILE
65
A
ILE
65
A
THR
68
A
THR
68
A
ALA
23
A
ALA
23
A
GLY
28
A
GLY
28
A
TRP
14
A
TRP
14
A
SER
18
A
SER
18
A
GLY
48
A
GLY
48
A
TYR
57
A
TYR
57
A
LEU
87
A
LEU
87
A
PHE
90
A
PHE
90
A
ILE
102
A
ILE
102
A
SER
103
A
SER
103
A
LYS
97
A
LYS
97
A
ILE
100
A
ILE
100
A
VAL
191
A
VAL
191
A
PRO
194
A
PRO
194
5
C 1 2 1