0.019720
0.000000
0.002021
0.000000
0.034498
0.000000
0.000000
0.000000
0.014376
0.00000
0.00000
0.00000
Zhang, R.
Skarina, T.
Savchenko, A.
Edwards, A.
Joachimiak, A.
Midwest Center for Structural Genomics (MCSG)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90.00
95.85
90.00
50.710
28.987
69.924
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
C
N
80
N
C
N
81
N
O
N
82
N
N
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
O
N
102
N
O
N
103
N
O
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
N
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
N
N
124
S
C
N
125
N
C
N
126
N
O
N
127
N
C
Y
128
N
C
Y
129
N
N
Y
130
N
C
Y
131
N
C
Y
132
N
N
N
133
N
O
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
S
C
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
S
C
N
171
N
C
N
172
N
O
N
173
N
C
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
O
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
N
N
192
S
C
N
193
N
C
N
194
N
O
N
195
N
C
N
196
N
C
N
197
N
C
N
198
N
C
N
199
N
N
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
N
N
217
S
C
N
218
N
C
N
219
N
O
N
220
N
C
N
221
N
C
N
222
N
S
N
223
N
C
N
224
N
O
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
N
N
237
S
C
N
238
N
C
N
239
N
O
N
240
N
C
Y
241
N
C
Y
242
N
C
Y
243
N
C
Y
244
N
C
Y
245
N
C
Y
246
N
C
N
247
N
O
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
N
N
260
S
C
N
261
N
C
N
262
N
O
N
263
N
C
N
264
N
C
N
265
N
C
N
266
N
O
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
N
N
277
S
C
N
278
N
C
N
279
N
O
N
280
N
C
N
281
N
O
N
282
N
O
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
R
C
N
295
N
O
N
296
N
C
N
297
N
O
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
N
N
308
S
C
N
309
N
C
N
310
N
O
N
311
N
C
Y
312
N
C
Y
313
N
C
Y
314
N
C
Y
315
N
N
Y
316
N
C
Y
317
N
C
Y
318
N
C
Y
319
N
C
Y
320
N
C
N
321
N
O
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
N
N
335
S
C
N
336
N
C
N
337
N
O
N
338
N
C
Y
339
N
C
Y
340
N
C
Y
341
N
C
Y
342
N
C
Y
343
N
C
Y
344
N
C
N
345
N
O
N
346
N
O
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
N
N
359
S
C
N
360
N
C
N
361
N
O
N
362
N
C
N
363
N
C
N
364
N
C
N
365
N
O
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
doub
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
doub
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
doub
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
doub
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
sing
Y
128
N
doub
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
Y
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
doub
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
doub
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
doub
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
Y
235
N
doub
Y
236
N
sing
Y
237
N
sing
N
238
N
sing
Y
239
N
doub
N
240
N
sing
Y
241
N
doub
N
242
N
sing
Y
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
doub
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
doub
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
doub
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
Y
304
N
doub
Y
305
N
sing
Y
306
N
sing
N
307
N
sing
Y
308
N
doub
Y
309
N
sing
Y
310
N
sing
N
311
N
sing
Y
312
N
sing
Y
313
N
doub
N
314
N
sing
Y
315
N
doub
N
316
N
sing
Y
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
doub
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
Y
332
N
doub
Y
333
N
sing
Y
334
N
sing
N
335
N
sing
Y
336
N
doub
N
337
N
sing
Y
338
N
doub
N
339
N
sing
Y
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
doub
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
To be Published
0353
1.5A crystal structure of a hypothetical protein APE0754 from Aeropyrum pernix
10.2210/pdb1tua/pdb
pdb_00001tua
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
mirrors
CCD
2004-06-21
SBC-2
Si 111 channel
SINGLE WAVELENGTH
M
x-ray
1
0.9797
1.0
19-ID
APS
0.9797
SYNCHROTRON
APS BEAMLINE 19-ID
21770.502
Hypothetical protein APE0754
1
man
polymer
18.015
water
164
nat
water
no
no
AMKPRIYVKVKPERLGAVIGPRGEVKAEIMRRTGTVITVDTENSMVIVEPEAEGIPPVNLMKAAEVVKAISLGFPPEKAF
RLLEEDQILVVVDLKQVVGDSQNHLKRIKGRIIGEGGRARRTIEEMTDTYINVGEYEVAIIGDYERAMAAKQAIEMLAEG
RMHSTVYRHLERIMREIKRRERLKMWAREEL
AMKPRIYVKVKPERLGAVIGPRGEVKAEIMRRTGTVITVDTENSMVIVEPEAEGIPPVNLMKAAEVVKAISLGFPPEKAF
RLLEEDQILVVVDLKQVVGDSQNHLKRIKGRIIGEGGRARRTIEEMTDTYINVGEYEVAIIGDYERAMAAKQAIEMLAEG
RMHSTVYRHLERIMREIKRRERLKMWAREEL
A
APC5052
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Aeropyrum
Escherichia
Escherichia coli
sample
GI:14600942
56636
Aeropyrum pernix
469008
Escherichia coli BL21(DE3)
BL21 (DE3)
plasmid
pET15b
1
2.412
47
VAPOR DIFFUSION, HANGING DROP
VAPOR DIFFUSION, HANGING DROP
Midwest Center for Structural Genomics
MCSG
PSI, Protein Structure Initiative
chem_comp_atom
chem_comp_bond
database_2
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
1
0
2004-08-17
1
1
2008-04-30
1
2
2011-07-13
1
3
2024-02-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
Y
RCSB
Y
RCSB
2004-06-24
REL
REL
HOH
water
TIP
301
2
HOH
HOH
301
A
TIP
302
2
HOH
HOH
302
A
TIP
303
2
HOH
HOH
303
A
TIP
304
2
HOH
HOH
304
A
TIP
305
2
HOH
HOH
305
A
TIP
306
2
HOH
HOH
306
A
TIP
307
2
HOH
HOH
307
A
TIP
308
2
HOH
HOH
308
A
TIP
309
2
HOH
HOH
309
A
TIP
310
2
HOH
HOH
310
A
TIP
311
2
HOH
HOH
311
A
TIP
312
2
HOH
HOH
312
A
TIP
313
2
HOH
HOH
313
A
TIP
314
2
HOH
HOH
314
A
TIP
315
2
HOH
HOH
315
A
TIP
316
2
HOH
HOH
316
A
TIP
317
2
HOH
HOH
317
A
TIP
318
2
HOH
HOH
318
A
TIP
319
2
HOH
HOH
319
A
TIP
320
2
HOH
HOH
320
A
TIP
321
2
HOH
HOH
321
A
TIP
322
2
HOH
HOH
322
A
TIP
323
2
HOH
HOH
323
A
TIP
324
2
HOH
HOH
324
A
TIP
325
2
HOH
HOH
325
A
TIP
326
2
HOH
HOH
326
A
TIP
327
2
HOH
HOH
327
A
TIP
328
2
HOH
HOH
328
A
TIP
329
2
HOH
HOH
329
A
TIP
330
2
HOH
HOH
330
A
TIP
331
2
HOH
HOH
331
A
TIP
332
2
HOH
HOH
332
A
TIP
333
2
HOH
HOH
333
A
TIP
334
2
HOH
HOH
334
A
TIP
335
2
HOH
HOH
335
A
TIP
336
2
HOH
HOH
336
A
TIP
337
2
HOH
HOH
337
A
TIP
338
2
HOH
HOH
338
A
TIP
339
2
HOH
HOH
339
A
TIP
340
2
HOH
HOH
340
A
TIP
341
2
HOH
HOH
341
A
TIP
342
2
HOH
HOH
342
A
TIP
343
2
HOH
HOH
343
A
TIP
344
2
HOH
HOH
344
A
TIP
345
2
HOH
HOH
345
A
TIP
346
2
HOH
HOH
346
A
TIP
347
2
HOH
HOH
347
A
TIP
348
2
HOH
HOH
348
A
TIP
349
2
HOH
HOH
349
A
TIP
350
2
HOH
HOH
350
A
TIP
351
2
HOH
HOH
351
A
TIP
352
2
HOH
HOH
352
A
TIP
353
2
HOH
HOH
353
A
TIP
354
2
HOH
HOH
354
A
TIP
355
2
HOH
HOH
355
A
TIP
356
2
HOH
HOH
356
A
TIP
357
2
HOH
HOH
357
A
TIP
358
2
HOH
HOH
358
A
TIP
359
2
HOH
HOH
359
A
TIP
360
2
HOH
HOH
360
A
TIP
361
2
HOH
HOH
361
A
TIP
362
2
HOH
HOH
362
A
TIP
363
2
HOH
HOH
363
A
TIP
364
2
HOH
HOH
364
A
TIP
365
2
HOH
HOH
365
A
TIP
366
2
HOH
HOH
366
A
TIP
367
2
HOH
HOH
367
A
TIP
368
2
HOH
HOH
368
A
TIP
369
2
HOH
HOH
369
A
TIP
370
2
HOH
HOH
370
A
TIP
371
2
HOH
HOH
371
A
TIP
372
2
HOH
HOH
372
A
TIP
373
2
HOH
HOH
373
A
TIP
374
2
HOH
HOH
374
A
TIP
375
2
HOH
HOH
375
A
TIP
376
2
HOH
HOH
376
A
TIP
377
2
HOH
HOH
377
A
TIP
378
2
HOH
HOH
378
A
TIP
379
2
HOH
HOH
379
A
TIP
380
2
HOH
HOH
380
A
TIP
381
2
HOH
HOH
381
A
TIP
382
2
HOH
HOH
382
A
TIP
383
2
HOH
HOH
383
A
TIP
384
2
HOH
HOH
384
A
TIP
385
2
HOH
HOH
385
A
TIP
386
2
HOH
HOH
386
A
TIP
387
2
HOH
HOH
387
A
TIP
388
2
HOH
HOH
388
A
TIP
389
2
HOH
HOH
389
A
TIP
390
2
HOH
HOH
390
A
TIP
391
2
HOH
HOH
391
A
TIP
392
2
HOH
HOH
392
A
TIP
393
2
HOH
HOH
393
A
TIP
394
2
HOH
HOH
394
A
TIP
395
2
HOH
HOH
395
A
TIP
396
2
HOH
HOH
396
A
TIP
397
2
HOH
HOH
397
A
TIP
398
2
HOH
HOH
398
A
TIP
399
2
HOH
HOH
399
A
TIP
400
2
HOH
HOH
400
A
TIP
401
2
HOH
HOH
401
A
TIP
402
2
HOH
HOH
402
A
TIP
403
2
HOH
HOH
403
A
TIP
404
2
HOH
HOH
404
A
TIP
405
2
HOH
HOH
405
A
TIP
406
2
HOH
HOH
406
A
TIP
407
2
HOH
HOH
407
A
TIP
408
2
HOH
HOH
408
A
TIP
409
2
HOH
HOH
409
A
TIP
410
2
HOH
HOH
410
A
TIP
411
2
HOH
HOH
411
A
TIP
412
2
HOH
HOH
412
A
TIP
413
2
HOH
HOH
413
A
TIP
414
2
HOH
HOH
414
A
TIP
415
2
HOH
HOH
415
A
TIP
416
2
HOH
HOH
416
A
TIP
417
2
HOH
HOH
417
A
TIP
418
2
HOH
HOH
418
A
TIP
419
2
HOH
HOH
419
A
TIP
420
2
HOH
HOH
420
A
TIP
421
2
HOH
HOH
421
A
TIP
422
2
HOH
HOH
422
A
TIP
423
2
HOH
HOH
423
A
TIP
424
2
HOH
HOH
424
A
TIP
425
2
HOH
HOH
425
A
TIP
426
2
HOH
HOH
426
A
TIP
427
2
HOH
HOH
427
A
TIP
428
2
HOH
HOH
428
A
TIP
429
2
HOH
HOH
429
A
TIP
430
2
HOH
HOH
430
A
TIP
431
2
HOH
HOH
431
A
TIP
432
2
HOH
HOH
432
A
TIP
433
2
HOH
HOH
433
A
TIP
434
2
HOH
HOH
434
A
TIP
435
2
HOH
HOH
435
A
TIP
436
2
HOH
HOH
436
A
TIP
437
2
HOH
HOH
437
A
TIP
438
2
HOH
HOH
438
A
TIP
439
2
HOH
HOH
439
A
TIP
440
2
HOH
HOH
440
A
TIP
441
2
HOH
HOH
441
A
TIP
442
2
HOH
HOH
442
A
TIP
443
2
HOH
HOH
443
A
TIP
444
2
HOH
HOH
444
A
TIP
445
2
HOH
HOH
445
A
TIP
446
2
HOH
HOH
446
A
TIP
447
2
HOH
HOH
447
A
TIP
448
2
HOH
HOH
448
A
TIP
449
2
HOH
HOH
449
A
TIP
450
2
HOH
HOH
450
A
TIP
451
2
HOH
HOH
451
A
TIP
452
2
HOH
HOH
452
A
TIP
453
2
HOH
HOH
453
A
TIP
454
2
HOH
HOH
454
A
TIP
455
2
HOH
HOH
455
A
TIP
456
2
HOH
HOH
456
A
TIP
457
2
HOH
HOH
457
A
TIP
458
2
HOH
HOH
458
A
TIP
459
2
HOH
HOH
459
A
TIP
460
2
HOH
HOH
460
A
TIP
461
2
HOH
HOH
461
A
TIP
462
2
HOH
HOH
462
A
TIP
463
2
HOH
HOH
463
A
TIP
464
2
HOH
HOH
464
A
ALA
0
n
1
ALA
0
A
MET
1
n
2
MET
1
A
LYS
2
n
3
LYS
2
A
PRO
3
n
4
PRO
3
A
ARG
4
n
5
ARG
4
A
ILE
5
n
6
ILE
5
A
TYR
6
n
7
TYR
6
A
VAL
7
n
8
VAL
7
A
LYS
8
n
9
LYS
8
A
VAL
9
n
10
VAL
9
A
LYS
10
n
11
LYS
10
A
PRO
11
n
12
PRO
11
A
GLU
12
n
13
GLU
12
A
ARG
13
n
14
ARG
13
A
LEU
14
n
15
LEU
14
A
GLY
15
n
16
GLY
15
A
ALA
16
n
17
ALA
16
A
VAL
17
n
18
VAL
17
A
ILE
18
n
19
ILE
18
A
GLY
19
n
20
GLY
19
A
PRO
20
n
21
PRO
20
A
ARG
21
n
22
ARG
21
A
GLY
22
n
23
GLY
22
A
GLU
23
n
24
GLU
23
A
VAL
24
n
25
VAL
24
A
LYS
25
n
26
LYS
25
A
ALA
26
n
27
ALA
26
A
GLU
27
n
28
GLU
27
A
ILE
28
n
29
ILE
28
A
MET
29
n
30
MET
29
A
ARG
30
n
31
ARG
30
A
ARG
31
n
32
ARG
31
A
THR
32
n
33
THR
32
A
GLY
33
n
34
GLY
33
A
THR
34
n
35
THR
34
A
VAL
35
n
36
VAL
35
A
ILE
36
n
37
ILE
36
A
THR
37
n
38
THR
37
A
VAL
38
n
39
VAL
38
A
ASP
39
n
40
ASP
39
A
THR
40
n
41
THR
40
A
GLU
41
n
42
GLU
41
A
ASN
42
n
43
ASN
42
A
SER
43
n
44
SER
43
A
MET
44
n
45
MET
44
A
VAL
45
n
46
VAL
45
A
ILE
46
n
47
ILE
46
A
VAL
47
n
48
VAL
47
A
GLU
48
n
49
GLU
48
A
PRO
49
n
50
PRO
49
A
GLU
50
n
51
GLU
50
A
ALA
51
n
52
ALA
51
A
GLU
52
n
53
GLU
52
A
GLY
53
n
54
GLY
53
A
ILE
54
n
55
ILE
54
A
PRO
55
n
56
PRO
55
A
PRO
56
n
57
PRO
56
A
VAL
57
n
58
VAL
57
A
ASN
58
n
59
ASN
58
A
LEU
59
n
60
LEU
59
A
MET
60
n
61
MET
60
A
LYS
61
n
62
LYS
61
A
ALA
62
n
63
ALA
62
A
ALA
63
n
64
ALA
63
A
GLU
64
n
65
GLU
64
A
VAL
65
n
66
VAL
65
A
VAL
66
n
67
VAL
66
A
LYS
67
n
68
LYS
67
A
ALA
68
n
69
ALA
68
A
ILE
69
n
70
ILE
69
A
SER
70
n
71
SER
70
A
LEU
71
n
72
LEU
71
A
GLY
72
n
73
GLY
72
A
PHE
73
n
74
PHE
73
A
PRO
74
n
75
PRO
74
A
PRO
75
n
76
PRO
75
A
GLU
76
n
77
GLU
76
A
LYS
77
n
78
LYS
77
A
ALA
78
n
79
ALA
78
A
PHE
79
n
80
PHE
79
A
ARG
80
n
81
ARG
80
A
LEU
81
n
82
LEU
81
A
LEU
82
n
83
LEU
82
A
GLU
83
n
84
GLU
83
A
GLU
84
n
85
GLU
84
A
ASP
85
n
86
ASP
85
A
GLN
86
n
87
GLN
86
A
ILE
87
n
88
ILE
87
A
LEU
88
n
89
LEU
88
A
VAL
89
n
90
VAL
89
A
VAL
90
n
91
VAL
90
A
VAL
91
n
92
VAL
91
A
ASP
92
n
93
ASP
92
A
LEU
93
n
94
LEU
93
A
LYS
94
n
95
LYS
94
A
GLN
95
n
96
GLN
95
A
VAL
96
n
97
VAL
96
A
VAL
97
n
98
VAL
97
A
GLY
98
n
99
GLY
98
A
ASP
99
n
100
ASP
99
A
SER
100
n
101
SER
100
A
GLN
101
n
102
GLN
101
A
ASN
102
n
103
ASN
102
A
HIS
103
n
104
HIS
103
A
LEU
104
n
105
LEU
104
A
LYS
105
n
106
LYS
105
A
ARG
106
n
107
ARG
106
A
ILE
107
n
108
ILE
107
A
LYS
108
n
109
LYS
108
A
GLY
109
n
110
GLY
109
A
ARG
110
n
111
ARG
110
A
ILE
111
n
112
ILE
111
A
ILE
112
n
113
ILE
112
A
GLY
113
n
114
GLY
113
A
GLU
114
n
115
GLU
114
A
GLY
115
n
116
GLY
115
A
GLY
116
n
117
GLY
116
A
ARG
117
n
118
ARG
117
A
ALA
118
n
119
ALA
118
A
ARG
119
n
120
ARG
119
A
ARG
120
n
121
ARG
120
A
THR
121
n
122
THR
121
A
ILE
122
n
123
ILE
122
A
GLU
123
n
124
GLU
123
A
GLU
124
n
125
GLU
124
A
MET
125
n
126
MET
125
A
THR
126
n
127
THR
126
A
ASP
127
n
128
ASP
127
A
THR
128
n
129
THR
128
A
TYR
129
n
130
TYR
129
A
ILE
130
n
131
ILE
130
A
ASN
131
n
132
ASN
131
A
VAL
132
n
133
VAL
132
A
GLY
133
n
134
GLY
133
A
GLU
134
n
135
GLU
134
A
TYR
135
n
136
TYR
135
A
GLU
136
n
137
GLU
136
A
VAL
137
n
138
VAL
137
A
ALA
138
n
139
ALA
138
A
ILE
139
n
140
ILE
139
A
ILE
140
n
141
ILE
140
A
GLY
141
n
142
GLY
141
A
ASP
142
n
143
ASP
142
A
TYR
143
n
144
TYR
143
A
GLU
144
n
145
GLU
144
A
ARG
145
n
146
ARG
145
A
ALA
146
n
147
ALA
146
A
MET
147
n
148
MET
147
A
ALA
148
n
149
ALA
148
A
ALA
149
n
150
ALA
149
A
LYS
150
n
151
LYS
150
A
GLN
151
n
152
GLN
151
A
ALA
152
n
153
ALA
152
A
ILE
153
n
154
ILE
153
A
GLU
154
n
155
GLU
154
A
MET
155
n
156
MET
155
A
LEU
156
n
157
LEU
156
A
ALA
157
n
158
ALA
157
A
GLU
158
n
159
GLU
158
A
GLY
159
n
160
GLY
159
A
ARG
160
n
161
ARG
160
A
MET
161
n
162
MET
161
A
HIS
162
n
163
HIS
162
A
SER
163
n
164
SER
163
A
THR
164
n
165
THR
164
A
VAL
165
n
166
VAL
165
A
TYR
166
n
167
TYR
166
A
ARG
167
n
168
ARG
167
A
HIS
168
n
169
HIS
168
A
LEU
169
n
170
LEU
169
A
GLU
170
n
171
GLU
170
A
ARG
171
n
172
ARG
171
A
ILE
172
n
173
ILE
172
A
MET
173
n
174
MET
173
A
ARG
174
n
175
ARG
174
A
GLU
175
n
176
GLU
175
A
ILE
176
n
177
ILE
176
A
LYS
177
n
178
LYS
177
A
ARG
178
n
179
ARG
178
A
ARG
179
n
180
ARG
179
A
GLU
180
n
181
GLU
180
A
ARG
181
n
182
ARG
181
A
LEU
182
n
183
LEU
182
A
LYS
183
n
184
LYS
183
A
MET
184
n
185
MET
184
A
TRP
185
n
186
TRP
185
A
ALA
186
n
187
ALA
186
A
ARG
187
n
188
ARG
187
A
GLU
188
n
189
GLU
188
A
n
190
189
A
n
191
190
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
VAL
7
A
N
VAL
8
A
O
VAL
45
A
O
VAL
46
A
O
GLU
48
A
O
GLU
49
A
N
VAL
35
A
N
VAL
36
A
N
VAL
89
A
N
VAL
90
A
O
ILE
139
A
O
ILE
140
A
O
ALA
138
A
O
ALA
139
A
N
ASN
131
A
N
ASN
132
1
A
GLU
189
A
GLU
190
1
Y
1
A
LEU
190
A
LEU
191
1
Y
1
A
ASP
85
71.62
-1.91
PROTEIN_REP.PARAM
PROTEIN.TOP
WATER_REP.PARAM
ION.PARAM
20.6
-0.62
0.00
-0.80
1.17
0.00
-0.56
0.229
0.004
0.208
0.21
0.208
1.50
20.88
2879
63292
58656
4.9
92.4
RANDOM
439793.35
0.000000
1
RESTRAINED
THROUGHOUT
0.0
SAD
Engh & Huber
FLAT MODEL
61.2203
0.443564
0.21
0.19
5.00
0.16
0.19
1.50
20.88
164
1667
0
0
1503
0.007
1.2
20.5
0.78
0.277
0.014
0.285
1.59
419
8210
6
4.9
81.5
15.9
1.5
50
1TUA
63292
61520
2.0
4.0
0.053
1
17.61
1.9
97.2
0.437
1.5
1.55
2.15
6292
1.9
95.4
refinement
CNS
1.1
data collection
SBC-Collect
data scaling
HKL-2000
phasing
CNS
1.5 A Crystal Structure of a Protein of Unknown Function APE0754 from Aeropyrum pernix
1
N
N
2
N
N
This protein existed as monomer. The deposited coords. represents the monomer in the asymmtric unit
A
LYS
10
A
LYS
11
HELX_P
A
GLU
12
A
GLU
13
5
1
3
A
ARG
13
A
ARG
14
HELX_P
A
GLY
19
A
GLY
20
1
2
7
A
GLY
22
A
GLY
23
HELX_P
A
GLY
33
A
GLY
34
1
3
12
A
PRO
55
A
PRO
56
HELX_P
A
GLY
72
A
GLY
73
1
4
18
A
PRO
74
A
PRO
75
HELX_P
A
PHE
79
A
PHE
80
1
5
6
A
ARG
80
A
ARG
81
HELX_P
A
GLU
83
A
GLU
84
5
6
4
A
LEU
93
A
LEU
94
HELX_P
A
GLY
98
A
GLY
99
1
7
6
A
SER
100
A
SER
101
HELX_P
A
GLY
113
A
GLY
114
1
8
14
A
GLY
116
A
GLY
117
HELX_P
A
ASP
127
A
ASP
128
1
9
12
A
TYR
143
A
TYR
144
HELX_P
A
GLU
158
A
GLU
159
1
10
16
A
MET
161
A
MET
162
HELX_P
A
GLU
188
A
GLU
189
1
11
28
STRUCTURAL GENOMICS, UNKNOWN FUNCTION
Structural Genomics, protein structure initiative, MCSG, Aeropyrum pernix, Four layers alpha-beta sandwich, PSI, Midwest Center for Structural Genomics, UNKNOWN FUNCTION
Q9YE16_AERPE
UNP
1
1
Q9YE16
MKPRIYVKVKPERLGAVIGPRGEVKAEIMRRTGTVITVDTENSMVIVEPEAEGIPPVNLMKAAEVVKAISLGFPPEKAFR
LLEEDQILVVVDLKQVVGDSQNHLKRIKGRIIGEGGRARRTIEEMTDTYINVGEYEVAIIGDYERAMAAKQAIEMLAEGR
MHSTVYRHLERIMREIKRRERLKMWAREEL
1
190
1TUA
1
190
Q9YE16
A
1
2
191
1
cloning artifact
ALA
0
1TUA
A
Q9YE16
UNP
1
3
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ILE
5
A
ILE
6
A
LYS
8
A
LYS
9
A
MET
44
A
MET
45
A
PRO
49
A
PRO
50
A
THR
34
A
THR
35
A
ASP
39
A
ASP
40
A
GLN
86
A
GLN
87
A
ASP
92
A
ASP
93
A
GLU
136
A
GLU
137
A
ASP
142
A
ASP
143
A
TYR
129
A
TYR
130
A
VAL
132
A
VAL
133
4
P 1 21 1