0.015513
0.008957
0.000000
0.000000
0.017913
0.000000
0.000000
0.000000
0.004209
0.00000
0.00000
0.00000
MET 1 - SIDE CHAIN OMITTED.
ASP 20 - SIDE CHAIN BEYOND CB OMITTED.
ARG 30 - SIDE CHAIN BEYOND CB OMITTED.
LYS 91 - SIDE CHAIN BEYOND CG OMITTED.
GLU 92 - SIDE CHAIN BEYOND CB OMITTED.
GLU 103 - SIDE CHAIN BEYOND CB OMITTED.
GLU 112 - SIDE CHAIN BEYOND CB OMITTED.
ILE 158 - SIDE CHAIN BEYOND CB OMITTED.
GLU 159 - SIDE CHAIN BEYOND CB OMITTED.
THR 160 - SIDE CHAIN BEYOND CB OMITTED.
ARG 214 - SIDE CHAIN BEYOND CB OMITTED.
LYS 230 - SIDE CHAIN BEYOND CG OMITTED.
LYS 233 - SIDE CHAIN BEYOND CB OMITTED.
GLU 235 - SIDE CHAIN BEYOND CB OMITTED.
SER 236 - SIDE CHAIN BEYOND CB OMITTED.
GLU 276 - SIDE CHAIN BEYOND CG OMITTED.
GLU 284 - SIDE CHAIN BEYOND CB OMITTED.
GLU 287 - SIDE CHAIN BEYOND CG OMITTED.
GLU 290 - SIDE CHAIN BEYOND CB OMITTED.
LYS 291 - SIDE CHAIN BEYOND CG OMITTED.
LYS 296 - SIDE CHAIN BEYOND CG OMITTED.
GLU 310 - SIDE CHAIN BEYOND CB OMITTED.
SER 319 - SIDE CHAIN BEYOND CB OMITTED.
Brown, K.A.
De Meester, P.
Blow, D.M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
64.460
64.460
237.600
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
To be Published
0353
Structural Analysis of a Series of Mutants of Tyrosyl-tRNA Synthetase: Enhancement of Catalysis by Hydrophobic Interactions
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
208
83
Structure of Tyrosyl-T/RNA Synthetase Refined at 2.3 Angstroms Resolution. Interaction of the Enzyme with the Tyrosyl Adenylate Intermediate
1989
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
194
287
Crystal Structure of a Deletion Mutant of a Tyrosyl-T/RNA Synthetase Complexed with Tyrosine
1987
UK
Nature
NATUAS
0006
0028-0836
326
416
Structure of a Mutant of Tyrosyl-tRNA Synthetase with Enhanced Catalytic Properties
1987
US
Biochemistry
BICHAW
0033
0006-2960
25
1891
Internal Thermodynamics of Position 51 Mutants and Natural Variants of Tyrosyl-tRNA Synthetase
1986
US
Biochemistry
BICHAW
0033
0006-2960
25
11887
Natural Variation of Tyrosyl-tRNA Synthetase and Comparison with Engineered Mutants
1986
US
Biochemistry
BICHAW
0033
0006-2960
25
1881
Use of Binding Energy in Catalysis Analyzed by Mutagenesis of the Tyrosyl-tRNA Synthetase
1986
US
Biochemistry
BICHAW
0033
0006-2960
24
5858
Fine Structure-Activity Analysis of Mutations at Position 51 of Tyrosyl-tRNA Synthetase
1985
US
Cell(Cambridge,Mass.)
CELLB5
0998
0092-8674
38
835
The Use of Double Mutants to Detect Structural Changes in the Active Site of the Tyrosyl-tRNA Synthetase (Bacillus Stearothermophilus)
1984
UK
Nature
NATUAS
0006
0028-0836
307
187
A Large Increase in Enzyme-Substrate Affinity by Protein Engineering
1984
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
173
477
Interaction of Crystalline Tyrosol-T/RNA Synthetase with Adenosine, Adenosine Monophosphate, Adenosine Triphosphate and Pyrophosphate in the Presence of Tyrosinol
1984
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
158
699
Tyrosyl-T/RNA Synthetase Forms a Mononucleotide-Binding Fold
1982
DK
Acta Crystallogr.,Sect.A
ACACEQ
0621
0108-7673
38
21
A Density-Modification Method for the Improvement of Poorly Resolved Protein Electron-Density Maps
1982
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
122
407
Binding of Tyrosine, Adenosine Triphosphate and Analogues to Crystalline Tyrosyl Transfer RNA Synthetase
1978
UK
Proc.FEBS Meet.
FEBPBY
0924
0071-4402
52
59
Structure of Aminoacyl T/RNA Synthetases
1978
US
Biochem.Biophys.Res.Commun.
BBRCA9
0146
0006-291X
76
728
The Peptide Chain of Tyrosyl T/RNA Synthetase. No Evidence for a Super-Secondary Structure of Four Alpha-Helices
1977
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
105
577
The Crystal Structure of Tyrosyl-Transfer RNA Synthetase at 2.7 Angstroms Resolution
1976
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
80
199
Crystallization and Preliminary X-Ray Diffraction Studies on Tyrosyl-Transfer RNA Synthetase from Bacillus Stearothermophilus
1973
10.2210/pdb1tyb/pdb
pdb_00001tyb
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
x-ray
1
1.0
36279.125
TYROSYL-tRNA SYNTHETASE
6.1.1.1
1
man
polymer
181.189
TYROSINE
1
syn
non-polymer
18.015
water
165
nat
water
no
no
MDLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGHLAGILTMRRFQQAGHRPIALVGGATGLIGDPS
GKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIKNNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRIET
GISFTEFSYMMLQAYDFLRLYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTIW
LDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKTLAEEVTKLVHGEEALRQAIRIS
MDLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGHLAGILTMRRFQQAGHRPIALVGGATGLIGDPS
GKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIKNNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRIET
GISFTEFSYMMLQAYDFLRLYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTIW
LDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKTLAEEVTKLVHGEEALRQAIRIS
E
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Geobacillus
sample
1422
Geobacillus stearothermophilus
3.93
68.68
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Derived calculations
Version format compliance
Data collection
Database references
Derived calculations
Other
1
0
1994-01-31
1
1
2008-03-24
1
2
2011-07-13
1
3
2024-02-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
BNL
1992-07-06
REL
TYR
TYROSINE
HOH
water
TYR
1
2
TYR
TYR
320
E
HOH
1
3
HOH
HOH
321
E
HOH
2
3
HOH
HOH
322
E
HOH
3
3
HOH
HOH
323
E
HOH
4
3
HOH
HOH
324
E
HOH
5
3
HOH
HOH
325
E
HOH
6
3
HOH
HOH
326
E
HOH
7
3
HOH
HOH
327
E
HOH
8
3
HOH
HOH
328
E
HOH
9
3
HOH
HOH
329
E
HOH
10
3
HOH
HOH
330
E
HOH
11
3
HOH
HOH
331
E
HOH
12
3
HOH
HOH
332
E
HOH
13
3
HOH
HOH
333
E
HOH
14
3
HOH
HOH
334
E
HOH
15
3
HOH
HOH
335
E
HOH
16
3
HOH
HOH
336
E
HOH
17
3
HOH
HOH
337
E
HOH
18
3
HOH
HOH
338
E
HOH
19
3
HOH
HOH
339
E
HOH
20
3
HOH
HOH
340
E
HOH
21
3
HOH
HOH
341
E
HOH
22
3
HOH
HOH
342
E
HOH
23
3
HOH
HOH
343
E
HOH
24
3
HOH
HOH
344
E
HOH
25
3
HOH
HOH
345
E
HOH
26
3
HOH
HOH
346
E
HOH
27
3
HOH
HOH
347
E
HOH
28
3
HOH
HOH
348
E
HOH
29
3
HOH
HOH
349
E
HOH
30
3
HOH
HOH
350
E
HOH
31
3
HOH
HOH
351
E
HOH
32
3
HOH
HOH
352
E
HOH
33
3
HOH
HOH
353
E
HOH
34
3
HOH
HOH
354
E
HOH
35
3
HOH
HOH
355
E
HOH
36
3
HOH
HOH
356
E
HOH
37
3
HOH
HOH
357
E
HOH
38
3
HOH
HOH
358
E
HOH
39
3
HOH
HOH
359
E
HOH
40
3
HOH
HOH
360
E
HOH
41
3
HOH
HOH
361
E
HOH
42
3
HOH
HOH
362
E
HOH
43
3
HOH
HOH
363
E
HOH
44
3
HOH
HOH
364
E
HOH
45
3
HOH
HOH
365
E
HOH
46
3
HOH
HOH
366
E
HOH
47
3
HOH
HOH
367
E
HOH
48
3
HOH
HOH
368
E
HOH
49
3
HOH
HOH
369
E
HOH
50
3
HOH
HOH
370
E
HOH
51
3
HOH
HOH
371
E
HOH
52
3
HOH
HOH
372
E
HOH
53
3
HOH
HOH
373
E
HOH
54
3
HOH
HOH
374
E
HOH
55
3
HOH
HOH
375
E
HOH
56
3
HOH
HOH
376
E
HOH
57
3
HOH
HOH
377
E
HOH
58
3
HOH
HOH
378
E
HOH
59
3
HOH
HOH
379
E
HOH
60
3
HOH
HOH
380
E
HOH
61
3
HOH
HOH
381
E
HOH
62
3
HOH
HOH
382
E
HOH
63
3
HOH
HOH
383
E
HOH
64
3
HOH
HOH
384
E
HOH
65
3
HOH
HOH
385
E
HOH
66
3
HOH
HOH
386
E
HOH
67
3
HOH
HOH
387
E
HOH
68
3
HOH
HOH
388
E
HOH
69
3
HOH
HOH
389
E
HOH
70
3
HOH
HOH
390
E
HOH
71
3
HOH
HOH
391
E
HOH
72
3
HOH
HOH
392
E
HOH
73
3
HOH
HOH
393
E
HOH
74
3
HOH
HOH
394
E
HOH
75
3
HOH
HOH
395
E
HOH
76
3
HOH
HOH
396
E
HOH
77
3
HOH
HOH
397
E
HOH
78
3
HOH
HOH
398
E
HOH
79
3
HOH
HOH
399
E
HOH
501
3
HOH
HOH
400
E
HOH
502
3
HOH
HOH
401
E
HOH
503
3
HOH
HOH
402
E
HOH
504
3
HOH
HOH
403
E
HOH
505
3
HOH
HOH
404
E
HOH
506
3
HOH
HOH
405
E
HOH
507
3
HOH
HOH
406
E
HOH
508
3
HOH
HOH
407
E
HOH
509
3
HOH
HOH
408
E
HOH
510
3
HOH
HOH
409
E
HOH
511
3
HOH
HOH
410
E
HOH
512
3
HOH
HOH
411
E
HOH
513
3
HOH
HOH
412
E
HOH
514
3
HOH
HOH
413
E
HOH
515
3
HOH
HOH
414
E
HOH
516
3
HOH
HOH
415
E
HOH
517
3
HOH
HOH
416
E
HOH
518
3
HOH
HOH
417
E
HOH
519
3
HOH
HOH
418
E
HOH
520
3
HOH
HOH
419
E
HOH
521
3
HOH
HOH
420
E
HOH
522
3
HOH
HOH
421
E
HOH
523
3
HOH
HOH
422
E
HOH
524
3
HOH
HOH
423
E
HOH
525
3
HOH
HOH
424
E
HOH
526
3
HOH
HOH
425
E
HOH
527
3
HOH
HOH
426
E
HOH
528
3
HOH
HOH
427
E
HOH
529
3
HOH
HOH
428
E
HOH
530
3
HOH
HOH
429
E
HOH
531
3
HOH
HOH
430
E
HOH
532
3
HOH
HOH
431
E
HOH
533
3
HOH
HOH
432
E
HOH
534
3
HOH
HOH
433
E
HOH
535
3
HOH
HOH
434
E
HOH
536
3
HOH
HOH
435
E
HOH
537
3
HOH
HOH
436
E
HOH
538
3
HOH
HOH
437
E
HOH
539
3
HOH
HOH
438
E
HOH
540
3
HOH
HOH
439
E
HOH
541
3
HOH
HOH
440
E
HOH
542
3
HOH
HOH
441
E
HOH
543
3
HOH
HOH
442
E
HOH
544
3
HOH
HOH
443
E
HOH
545
3
HOH
HOH
444
E
HOH
546
3
HOH
HOH
445
E
HOH
547
3
HOH
HOH
446
E
HOH
548
3
HOH
HOH
447
E
HOH
549
3
HOH
HOH
448
E
HOH
550
3
HOH
HOH
449
E
HOH
551
3
HOH
HOH
450
E
HOH
552
3
HOH
HOH
451
E
HOH
553
3
HOH
HOH
452
E
HOH
554
3
HOH
HOH
453
E
HOH
555
3
HOH
HOH
454
E
HOH
556
3
HOH
HOH
455
E
HOH
557
3
HOH
HOH
456
E
HOH
558
3
HOH
HOH
457
E
HOH
559
3
HOH
HOH
458
E
HOH
560
3
HOH
HOH
459
E
HOH
561
3
HOH
HOH
460
E
HOH
562
3
HOH
HOH
461
E
HOH
563
3
HOH
HOH
462
E
HOH
564
3
HOH
HOH
463
E
HOH
565
3
HOH
HOH
464
E
HOH
566
3
HOH
HOH
465
E
HOH
567
3
HOH
HOH
466
E
HOH
568
3
HOH
HOH
467
E
HOH
569
3
HOH
HOH
468
E
HOH
570
3
HOH
HOH
469
E
HOH
571
3
HOH
HOH
470
E
HOH
572
3
HOH
HOH
471
E
HOH
573
3
HOH
HOH
472
E
HOH
574
3
HOH
HOH
473
E
HOH
575
3
HOH
HOH
474
E
HOH
576
3
HOH
HOH
475
E
HOH
577
3
HOH
HOH
476
E
HOH
578
3
HOH
HOH
477
E
HOH
580
3
HOH
HOH
478
E
HOH
581
3
HOH
HOH
479
E
HOH
582
3
HOH
HOH
480
E
HOH
583
3
HOH
HOH
481
E
HOH
584
3
HOH
HOH
482
E
HOH
601
3
HOH
HOH
483
E
HOH
602
3
HOH
HOH
484
E
HOH
603
3
HOH
HOH
485
E
MET
1
n
1
MET
1
E
ASP
2
n
2
ASP
2
E
LEU
3
n
3
LEU
3
E
LEU
4
n
4
LEU
4
E
ALA
5
n
5
ALA
5
E
GLU
6
n
6
GLU
6
E
LEU
7
n
7
LEU
7
E
GLN
8
n
8
GLN
8
E
TRP
9
n
9
TRP
9
E
ARG
10
n
10
ARG
10
E
GLY
11
n
11
GLY
11
E
LEU
12
n
12
LEU
12
E
VAL
13
n
13
VAL
13
E
ASN
14
n
14
ASN
14
E
GLN
15
n
15
GLN
15
E
THR
16
n
16
THR
16
E
THR
17
n
17
THR
17
E
ASP
18
n
18
ASP
18
E
GLU
19
n
19
GLU
19
E
ASP
20
n
20
ASP
20
E
GLY
21
n
21
GLY
21
E
LEU
22
n
22
LEU
22
E
ARG
23
n
23
ARG
23
E
LYS
24
n
24
LYS
24
E
LEU
25
n
25
LEU
25
E
LEU
26
n
26
LEU
26
E
ASN
27
n
27
ASN
27
E
GLU
28
n
28
GLU
28
E
GLU
29
n
29
GLU
29
E
ARG
30
n
30
ARG
30
E
VAL
31
n
31
VAL
31
E
THR
32
n
32
THR
32
E
LEU
33
n
33
LEU
33
E
TYR
34
n
34
TYR
34
E
CYS
35
n
35
CYS
35
E
GLY
36
n
36
GLY
36
E
PHE
37
n
37
PHE
37
E
ASP
38
n
38
ASP
38
E
PRO
39
n
39
PRO
39
E
THR
40
n
40
THR
40
E
ALA
41
n
41
ALA
41
E
ASP
42
n
42
ASP
42
E
SER
43
n
43
SER
43
E
LEU
44
n
44
LEU
44
E
HIS
45
n
45
HIS
45
E
ILE
46
n
46
ILE
46
E
GLY
47
n
47
GLY
47
E
HIS
48
n
48
HIS
48
E
LEU
49
n
49
LEU
49
E
ALA
50
n
50
ALA
50
E
GLY
51
n
51
GLY
51
E
ILE
52
n
52
ILE
52
E
LEU
53
n
53
LEU
53
E
THR
54
n
54
THR
54
E
MET
55
n
55
MET
55
E
ARG
56
n
56
ARG
56
E
ARG
57
n
57
ARG
57
E
PHE
58
n
58
PHE
58
E
GLN
59
n
59
GLN
59
E
GLN
60
n
60
GLN
60
E
ALA
61
n
61
ALA
61
E
GLY
62
n
62
GLY
62
E
HIS
63
n
63
HIS
63
E
ARG
64
n
64
ARG
64
E
PRO
65
n
65
PRO
65
E
ILE
66
n
66
ILE
66
E
ALA
67
n
67
ALA
67
E
LEU
68
n
68
LEU
68
E
VAL
69
n
69
VAL
69
E
GLY
70
n
70
GLY
70
E
GLY
71
n
71
GLY
71
E
ALA
72
n
72
ALA
72
E
THR
73
n
73
THR
73
E
GLY
74
n
74
GLY
74
E
LEU
75
n
75
LEU
75
E
ILE
76
n
76
ILE
76
E
GLY
77
n
77
GLY
77
E
ASP
78
n
78
ASP
78
E
PRO
79
n
79
PRO
79
E
SER
80
n
80
SER
80
E
GLY
81
n
81
GLY
81
E
LYS
82
n
82
LYS
82
E
LYS
83
n
83
LYS
83
E
SER
84
n
84
SER
84
E
GLU
85
n
85
GLU
85
E
ARG
86
n
86
ARG
86
E
THR
87
n
87
THR
87
E
LEU
88
n
88
LEU
88
E
ASN
89
n
89
ASN
89
E
ALA
90
n
90
ALA
90
E
LYS
91
n
91
LYS
91
E
GLU
92
n
92
GLU
92
E
THR
93
n
93
THR
93
E
VAL
94
n
94
VAL
94
E
GLU
95
n
95
GLU
95
E
ALA
96
n
96
ALA
96
E
TRP
97
n
97
TRP
97
E
SER
98
n
98
SER
98
E
ALA
99
n
99
ALA
99
E
ARG
100
n
100
ARG
100
E
ILE
101
n
101
ILE
101
E
LYS
102
n
102
LYS
102
E
GLU
103
n
103
GLU
103
E
GLN
104
n
104
GLN
104
E
LEU
105
n
105
LEU
105
E
GLY
106
n
106
GLY
106
E
ARG
107
n
107
ARG
107
E
PHE
108
n
108
PHE
108
E
LEU
109
n
109
LEU
109
E
ASP
110
n
110
ASP
110
E
PHE
111
n
111
PHE
111
E
GLU
112
n
112
GLU
112
E
ALA
113
n
113
ALA
113
E
ASP
114
n
114
ASP
114
E
GLY
115
n
115
GLY
115
E
ASN
116
n
116
ASN
116
E
PRO
117
n
117
PRO
117
E
ALA
118
n
118
ALA
118
E
LYS
119
n
119
LYS
119
E
ILE
120
n
120
ILE
120
E
LYS
121
n
121
LYS
121
E
ASN
122
n
122
ASN
122
E
ASN
123
n
123
ASN
123
E
TYR
124
n
124
TYR
124
E
ASP
125
n
125
ASP
125
E
TRP
126
n
126
TRP
126
E
ILE
127
n
127
ILE
127
E
GLY
128
n
128
GLY
128
E
PRO
129
n
129
PRO
129
E
LEU
130
n
130
LEU
130
E
ASP
131
n
131
ASP
131
E
VAL
132
n
132
VAL
132
E
ILE
133
n
133
ILE
133
E
THR
134
n
134
THR
134
E
PHE
135
n
135
PHE
135
E
LEU
136
n
136
LEU
136
E
ARG
137
n
137
ARG
137
E
ASP
138
n
138
ASP
138
E
VAL
139
n
139
VAL
139
E
GLY
140
n
140
GLY
140
E
LYS
141
n
141
LYS
141
E
HIS
142
n
142
HIS
142
E
PHE
143
n
143
PHE
143
E
SER
144
n
144
SER
144
E
VAL
145
n
145
VAL
145
E
ASN
146
n
146
ASN
146
E
TYR
147
n
147
TYR
147
E
MET
148
n
148
MET
148
E
MET
149
n
149
MET
149
E
ALA
150
n
150
ALA
150
E
LYS
151
n
151
LYS
151
E
GLU
152
n
152
GLU
152
E
SER
153
n
153
SER
153
E
VAL
154
n
154
VAL
154
E
GLN
155
n
155
GLN
155
E
SER
156
n
156
SER
156
E
ARG
157
n
157
ARG
157
E
ILE
158
n
158
ILE
158
E
GLU
159
n
159
GLU
159
E
THR
160
n
160
THR
160
E
GLY
161
n
161
GLY
161
E
ILE
162
n
162
ILE
162
E
SER
163
n
163
SER
163
E
PHE
164
n
164
PHE
164
E
THR
165
n
165
THR
165
E
GLU
166
n
166
GLU
166
E
PHE
167
n
167
PHE
167
E
SER
168
n
168
SER
168
E
TYR
169
n
169
TYR
169
E
MET
170
n
170
MET
170
E
MET
171
n
171
MET
171
E
LEU
172
n
172
LEU
172
E
GLN
173
n
173
GLN
173
E
ALA
174
n
174
ALA
174
E
TYR
175
n
175
TYR
175
E
ASP
176
n
176
ASP
176
E
PHE
177
n
177
PHE
177
E
LEU
178
n
178
LEU
178
E
ARG
179
n
179
ARG
179
E
LEU
180
n
180
LEU
180
E
TYR
181
n
181
TYR
181
E
GLU
182
n
182
GLU
182
E
THR
183
n
183
THR
183
E
GLU
184
n
184
GLU
184
E
GLY
185
n
185
GLY
185
E
CYS
186
n
186
CYS
186
E
ARG
187
n
187
ARG
187
E
LEU
188
n
188
LEU
188
E
GLN
189
n
189
GLN
189
E
ILE
190
n
190
ILE
190
E
GLY
191
n
191
GLY
191
E
GLY
192
n
192
GLY
192
E
SER
193
n
193
SER
193
E
ASP
194
n
194
ASP
194
E
GLN
195
n
195
GLN
195
E
TRP
196
n
196
TRP
196
E
GLY
197
n
197
GLY
197
E
ASN
198
n
198
ASN
198
E
ILE
199
n
199
ILE
199
E
THR
200
n
200
THR
200
E
ALA
201
n
201
ALA
201
E
GLY
202
n
202
GLY
202
E
LEU
203
n
203
LEU
203
E
GLU
204
n
204
GLU
204
E
LEU
205
n
205
LEU
205
E
ILE
206
n
206
ILE
206
E
ARG
207
n
207
ARG
207
E
LYS
208
n
208
LYS
208
E
THR
209
n
209
THR
209
E
LYS
210
n
210
LYS
210
E
GLY
211
n
211
GLY
211
E
n
212
212
E
n
213
213
E
ARG
214
n
214
ARG
214
E
ALA
215
n
215
ALA
215
E
PHE
216
n
216
PHE
216
E
GLY
217
n
217
GLY
217
E
LEU
218
n
218
LEU
218
E
THR
219
n
219
THR
219
E
ILE
220
n
220
ILE
220
E
PRO
221
n
221
PRO
221
E
LEU
222
n
222
LEU
222
E
VAL
223
n
223
VAL
223
E
THR
224
n
224
THR
224
E
LYS
225
n
225
LYS
225
E
ALA
226
n
226
ALA
226
E
ASP
227
n
227
ASP
227
E
GLY
228
n
228
GLY
228
E
THR
229
n
229
THR
229
E
LYS
230
n
230
LYS
230
E
PHE
231
n
231
PHE
231
E
GLY
232
n
232
GLY
232
E
LYS
233
n
233
LYS
233
E
THR
234
n
234
THR
234
E
GLU
235
n
235
GLU
235
E
SER
236
n
236
SER
236
E
GLY
237
n
237
GLY
237
E
THR
238
n
238
THR
238
E
ILE
239
n
239
ILE
239
E
TRP
240
n
240
TRP
240
E
LEU
241
n
241
LEU
241
E
ASP
242
n
242
ASP
242
E
LYS
243
n
243
LYS
243
E
GLU
244
n
244
GLU
244
E
LYS
245
n
245
LYS
245
E
THR
246
n
246
THR
246
E
SER
247
n
247
SER
247
E
PRO
248
n
248
PRO
248
E
TYR
249
n
249
TYR
249
E
GLU
250
n
250
GLU
250
E
PHE
251
n
251
PHE
251
E
TYR
252
n
252
TYR
252
E
GLN
253
n
253
GLN
253
E
PHE
254
n
254
PHE
254
E
TRP
255
n
255
TRP
255
E
ILE
256
n
256
ILE
256
E
ASN
257
n
257
ASN
257
E
THR
258
n
258
THR
258
E
ASP
259
n
259
ASP
259
E
ASP
260
n
260
ASP
260
E
ARG
261
n
261
ARG
261
E
ASP
262
n
262
ASP
262
E
VAL
263
n
263
VAL
263
E
ILE
264
n
264
ILE
264
E
ARG
265
n
265
ARG
265
E
TYR
266
n
266
TYR
266
E
LEU
267
n
267
LEU
267
E
LYS
268
n
268
LYS
268
E
TYR
269
n
269
TYR
269
E
PHE
270
n
270
PHE
270
E
THR
271
n
271
THR
271
E
PHE
272
n
272
PHE
272
E
LEU
273
n
273
LEU
273
E
SER
274
n
274
SER
274
E
LYS
275
n
275
LYS
275
E
GLU
276
n
276
GLU
276
E
GLU
277
n
277
GLU
277
E
ILE
278
n
278
ILE
278
E
GLU
279
n
279
GLU
279
E
ALA
280
n
280
ALA
280
E
LEU
281
n
281
LEU
281
E
GLU
282
n
282
GLU
282
E
GLN
283
n
283
GLN
283
E
GLU
284
n
284
GLU
284
E
LEU
285
n
285
LEU
285
E
ARG
286
n
286
ARG
286
E
GLU
287
n
287
GLU
287
E
ALA
288
n
288
ALA
288
E
PRO
289
n
289
PRO
289
E
GLU
290
n
290
GLU
290
E
LYS
291
n
291
LYS
291
E
ARG
292
n
292
ARG
292
E
ALA
293
n
293
ALA
293
E
ALA
294
n
294
ALA
294
E
GLN
295
n
295
GLN
295
E
LYS
296
n
296
LYS
296
E
THR
297
n
297
THR
297
E
LEU
298
n
298
LEU
298
E
ALA
299
n
299
ALA
299
E
GLU
300
n
300
GLU
300
E
GLU
301
n
301
GLU
301
E
VAL
302
n
302
VAL
302
E
THR
303
n
303
THR
303
E
LYS
304
n
304
LYS
304
E
LEU
305
n
305
LEU
305
E
VAL
306
n
306
VAL
306
E
HIS
307
n
307
HIS
307
E
GLY
308
n
308
GLY
308
E
GLU
309
n
309
GLU
309
E
GLU
310
n
310
GLU
310
E
ALA
311
n
311
ALA
311
E
LEU
312
n
312
LEU
312
E
ARG
313
n
313
ARG
313
E
GLN
314
n
314
GLN
314
E
ALA
315
n
315
ALA
315
E
ILE
316
n
316
ILE
316
E
ARG
317
n
317
ARG
317
E
ILE
318
n
318
ILE
318
E
SER
319
n
319
SER
319
E
author_and_software_defined_assembly
PISA
2
dimeric
3030
-24
25980
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
0.8660254038
0.5000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
4_555
y,x,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
E
O
GLN
15
A
O
GLN
15
E
N
THR
219
A
N
THR
219
E
N
LEU
218
A
N
LEU
218
E
O
GLN
189
A
O
GLN
189
E
O
LEU
188
A
O
LEU
188
E
N
TYR
34
A
N
TYR
34
E
N
CYS
35
A
N
CYS
35
E
O
ILE
66
A
O
ILE
66
E
O
ALA
67
A
O
ALA
67
E
N
LYS
121
A
N
LYS
121
1
E
CB
MET
1
A
CB
MET
1
1
Y
1
E
CG
MET
1
A
CG
MET
1
1
Y
1
E
SD
MET
1
A
SD
MET
1
1
Y
1
E
CE
MET
1
A
CE
MET
1
1
Y
1
E
CG
ASP
20
A
CG
ASP
20
1
Y
1
E
OD1
ASP
20
A
OD1
ASP
20
1
Y
1
E
OD2
ASP
20
A
OD2
ASP
20
1
Y
1
E
CG
ARG
30
A
CG
ARG
30
1
Y
1
E
CD
ARG
30
A
CD
ARG
30
1
Y
1
E
NE
ARG
30
A
NE
ARG
30
1
Y
1
E
CZ
ARG
30
A
CZ
ARG
30
1
Y
1
E
NH1
ARG
30
A
NH1
ARG
30
1
Y
1
E
NH2
ARG
30
A
NH2
ARG
30
1
Y
1
E
CD
LYS
91
A
CD
LYS
91
1
Y
1
E
CE
LYS
91
A
CE
LYS
91
1
Y
1
E
NZ
LYS
91
A
NZ
LYS
91
1
Y
1
E
CG
GLU
92
A
CG
GLU
92
1
Y
1
E
CD
GLU
92
A
CD
GLU
92
1
Y
1
E
OE1
GLU
92
A
OE1
GLU
92
1
Y
1
E
OE2
GLU
92
A
OE2
GLU
92
1
Y
1
E
CG
GLU
103
A
CG
GLU
103
1
Y
1
E
CD
GLU
103
A
CD
GLU
103
1
Y
1
E
OE1
GLU
103
A
OE1
GLU
103
1
Y
1
E
OE2
GLU
103
A
OE2
GLU
103
1
Y
1
E
CG
GLU
112
A
CG
GLU
112
1
Y
1
E
CD
GLU
112
A
CD
GLU
112
1
Y
1
E
OE1
GLU
112
A
OE1
GLU
112
1
Y
1
E
OE2
GLU
112
A
OE2
GLU
112
1
Y
1
E
CG1
ILE
158
A
CG1
ILE
158
1
Y
1
E
CG2
ILE
158
A
CG2
ILE
158
1
Y
1
E
CD1
ILE
158
A
CD1
ILE
158
1
Y
1
E
CG
GLU
159
A
CG
GLU
159
1
Y
1
E
CD
GLU
159
A
CD
GLU
159
1
Y
1
E
OE1
GLU
159
A
OE1
GLU
159
1
Y
1
E
OE2
GLU
159
A
OE2
GLU
159
1
Y
1
E
OG1
THR
160
A
OG1
THR
160
1
Y
1
E
CG2
THR
160
A
CG2
THR
160
1
Y
1
E
CG
ARG
214
A
CG
ARG
214
1
Y
1
E
CD
ARG
214
A
CD
ARG
214
1
Y
1
E
NE
ARG
214
A
NE
ARG
214
1
Y
1
E
CZ
ARG
214
A
CZ
ARG
214
1
Y
1
E
NH1
ARG
214
A
NH1
ARG
214
1
Y
1
E
NH2
ARG
214
A
NH2
ARG
214
1
Y
1
E
CD
LYS
230
A
CD
LYS
230
1
Y
1
E
CE
LYS
230
A
CE
LYS
230
1
Y
1
E
NZ
LYS
230
A
NZ
LYS
230
1
Y
1
E
CG
LYS
233
A
CG
LYS
233
1
Y
1
E
CD
LYS
233
A
CD
LYS
233
1
Y
1
E
CE
LYS
233
A
CE
LYS
233
1
Y
1
E
NZ
LYS
233
A
NZ
LYS
233
1
Y
1
E
CG
GLU
235
A
CG
GLU
235
1
Y
1
E
CD
GLU
235
A
CD
GLU
235
1
Y
1
E
OE1
GLU
235
A
OE1
GLU
235
1
Y
1
E
OE2
GLU
235
A
OE2
GLU
235
1
Y
1
E
OG
SER
236
A
OG
SER
236
1
Y
1
E
CD
GLU
276
A
CD
GLU
276
1
Y
1
E
OE1
GLU
276
A
OE1
GLU
276
1
Y
1
E
OE2
GLU
276
A
OE2
GLU
276
1
Y
1
E
CG
GLU
284
A
CG
GLU
284
1
Y
1
E
CD
GLU
284
A
CD
GLU
284
1
Y
1
E
OE1
GLU
284
A
OE1
GLU
284
1
Y
1
E
OE2
GLU
284
A
OE2
GLU
284
1
Y
1
E
CD
GLU
287
A
CD
GLU
287
1
Y
1
E
OE1
GLU
287
A
OE1
GLU
287
1
Y
1
E
OE2
GLU
287
A
OE2
GLU
287
1
Y
1
E
CG
GLU
290
A
CG
GLU
290
1
Y
1
E
CD
GLU
290
A
CD
GLU
290
1
Y
1
E
OE1
GLU
290
A
OE1
GLU
290
1
Y
1
E
OE2
GLU
290
A
OE2
GLU
290
1
Y
1
E
CD
LYS
291
A
CD
LYS
291
1
Y
1
E
CE
LYS
291
A
CE
LYS
291
1
Y
1
E
NZ
LYS
291
A
NZ
LYS
291
1
Y
1
E
CD
LYS
296
A
CD
LYS
296
1
Y
1
E
CE
LYS
296
A
CE
LYS
296
1
Y
1
E
NZ
LYS
296
A
NZ
LYS
296
1
Y
1
E
CG
GLU
310
A
CG
GLU
310
1
Y
1
E
CD
GLU
310
A
CD
GLU
310
1
Y
1
E
OE1
GLU
310
A
OE1
GLU
310
1
Y
1
E
OE2
GLU
310
A
OE2
GLU
310
1
Y
1
E
OG
SER
319
A
OG
SER
319
1
Y
1
E
GLU
212
A
GLU
212
1
Y
1
E
ALA
213
A
ALA
213
1
Y
1
10.37
1.40
123.60
133.97
E
E
E
CD
NE
CZ
ARG
ARG
ARG
10
10
10
N
1
5.85
0.50
120.30
126.15
E
E
E
NE
CZ
NH1
ARG
ARG
ARG
10
10
10
N
1
13.72
2.20
113.40
127.12
E
E
E
CA
CB
CG
GLU
GLU
GLU
28
28
28
N
1
9.11
1.40
110.10
119.21
E
E
E
N
CA
CB
ALA
ALA
ALA
41
41
41
N
1
-3.33
0.50
120.30
116.97
E
E
E
NE
CZ
NH2
ARG
ARG
ARG
56
56
56
N
1
9.07
1.40
123.60
132.67
E
E
E
CD
NE
CZ
ARG
ARG
ARG
64
64
64
N
1
3.46
0.50
120.30
123.76
E
E
E
NE
CZ
NH1
ARG
ARG
ARG
64
64
64
N
1
55.06
1.40
123.60
178.66
E
E
E
CD
NE
CZ
ARG
ARG
ARG
86
86
86
N
1
6.51
0.50
120.30
126.81
E
E
E
NE
CZ
NH2
ARG
ARG
ARG
86
86
86
N
1
-3.40
0.50
120.30
116.90
E
E
E
NE
CZ
NH2
ARG
ARG
ARG
100
100
100
N
1
8.09
0.90
118.30
126.39
E
E
E
CB
CG
OD1
ASP
ASP
ASP
110
110
110
N
1
6.22
0.90
118.30
124.52
E
E
E
CB
CG
OD2
ASP
ASP
ASP
131
131
131
N
1
6.90
0.90
118.30
125.20
E
E
E
CB
CG
OD1
ASP
ASP
ASP
138
138
138
N
1
3.02
0.50
120.30
123.32
E
E
E
NE
CZ
NH1
ARG
ARG
ARG
157
157
157
N
1
-4.34
0.50
120.30
115.96
E
E
E
NE
CZ
NH2
ARG
ARG
ARG
157
157
157
N
1
-4.23
0.50
120.30
116.07
E
E
E
NE
CZ
NH2
ARG
ARG
ARG
179
179
179
N
1
5.80
0.90
118.30
124.10
E
E
E
CB
CG
OD1
ASP
ASP
ASP
194
194
194
N
1
3.43
0.50
120.30
123.73
E
E
E
NE
CZ
NH1
ARG
ARG
ARG
207
207
207
N
1
18.58
2.10
111.80
130.38
E
E
E
CG
CD
NE
ARG
ARG
ARG
261
261
261
N
1
12.86
1.40
123.60
136.46
E
E
E
CD
NE
CZ
ARG
ARG
ARG
261
261
261
N
1
4.66
0.50
120.30
124.96
E
E
E
NE
CZ
NH1
ARG
ARG
ARG
261
261
261
N
1
-4.66
0.50
120.30
115.64
E
E
E
NE
CZ
NH2
ARG
ARG
ARG
286
286
286
N
1
9.76
1.40
123.60
133.36
E
E
E
CD
NE
CZ
ARG
ARG
ARG
313
313
313
N
1
4.93
0.50
120.30
125.23
E
E
E
NE
CZ
NH1
ARG
ARG
ARG
313
313
313
N
1
E
E
N
O
ALA
HOH
90
418
1.46
1_555
5_664
1
E
E
C
O
ASN
HOH
89
418
2.15
1_555
5_664
1
E
ASP
18
-161.73
98.93
THE 83 WATER MOLECULES WITH RESIDUE NUMBERS GREATER
THAN 500 PROBABLY REPRESENT DISORDERED PROTEIN.
0.23
2.5
18193
1
2.5
165
2638
13
0
2460
0.012
0.03
0.032
0.04
0.031
0.05
1.81
1.75
2.82
2.25
2.54
2.00
3.70
2.50
0.009
0.02
0.106
0.15
0.18
0.30
0.26
0.30
17.2
15.0
refinement
PROLSQ
STRUCTURAL ANALYSIS OF A SERIES OF MUTANTS OF TYROSYL-TRNA SYNTHETASE: ENHANCEMENT OF CATALYSIS BY HYDROPHOBIC INTERACTIONS
1
N
N
2
N
N
3
N
N
E
ASP
2
A
ASP
2
HELX_P
E
ARG
10
A
ARG
10
1
H1
9
E
GLU
19
A
GLU
19
HELX_P
E
GLU
28
A
GLU
28
1
H2
10
E
LEU
49
A
LEU
49
HELX_P
E
GLN
60
A
GLN
60
1
H3
12
E
THR
73
A
THR
73
HELX_P
E
LEU
75
A
LEU
75
5
H4
3
E
LYS
91
A
LYS
91
HELX_P
E
LEU
105
A
LEU
105
1
H5
15
E
TYR
124
A
TYR
124
HELX_P
E
ILE
127
A
ILE
127
1
H6
4
E
VAL
132
A
VAL
132
HELX_P
E
ASP
138
A
ASP
138
1
H7
7
E
GLY
140
A
GLY
140
HELX_P
E
HIS
142
A
HIS
142
5
H
3
E
VAL
145
A
VAL
145
HELX_P
E
MET
149
A
MET
149
1
H8
5
E
GLU
152
A
GLU
152
HELX_P
E
GLN
155
A
GLN
155
1
H9
4
E
PHE
164
A
PHE
164
HELX_P
E
GLU
184
A
GLU
184
1
H10
21
E
TRP
196
A
TRP
196
HELX_P
E
LYS
210
A
LYS
210
1
H11
15
E
PRO
248
A
PRO
248
HELX_P
E
ILE
256
A
ILE
256
1
H1*
9
E
VAL
263
A
VAL
263
HELX_P
E
PHE
270
A
PHE
270
1
H2*
8
E
LYS
275
A
LYS
275
HELX_P
E
GLU
287
A
GLU
287
1
H3*
13
E
ALA
293
A
ALA
293
HELX_P
E
VAL
306
A
VAL
306
1
H4*
14
E
GLU
309
A
GLU
309
HELX_P
E
ILE
318
A
ILE
318
1
H5*
10
AMINOACYL-TRNA SYNTHASE
AMINOACYL-TRNA SYNTHASE
SYY_BACST
UNP
1
1
P00952
MDLLAELQWRGLVNQTTDEDGLRKLLNEERVTLYCGFDPTADSLHIGHLATILTMRRFQQAGHRPIALVGGATGLIGDPS
GKKSERTLNAKETVEAWSARIKEQLGRFLDFEADGNPAKIKNNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSRIET
GISFTEFSYMMLQAYDFLRLYETEGCRLQIGGSDQWGNITAGLELIRKTKGEARAFGLTIPLVTKADGTKFGKTESGTIW
LDKEKTSPYEFYQFWINTDDRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKTLAEEVTKLVHGEEALRQAIRISE
ALFSGDIANLTAAEIEQGFKDVPSFVHEGGDVPLVELLVSAGISPSKRQAREDIQNGAIYVNGERLQDVGAILTAEHRLE
GRFTVIRRGKKKYYLIRYA
1
319
1TYB
1
319
P00952
E
1
1
319
1
THR
conflict
GLY
51
1TYB
E
P00952
UNP
51
51
6
anti-parallel
parallel
parallel
parallel
parallel
E
GLN
15
A
GLN
15
E
THR
16
A
THR
16
E
PHE
216
A
PHE
216
E
ILE
220
A
ILE
220
E
ARG
187
A
ARG
187
E
GLY
192
A
GLY
192
E
THR
32
A
THR
32
E
PHE
37
A
PHE
37
E
ARG
64
A
ARG
64
E
VAL
69
A
VAL
69
E
LYS
119
A
LYS
119
E
ASN
122
A
ASN
122
BINDING SITE FOR RESIDUE TYR E 320
E
TYR
320
Software
11
E
TYR
34
A
TYR
34
11
1_555
E
GLY
36
A
GLY
36
11
1_555
E
ASP
38
A
ASP
38
11
1_555
E
LEU
68
A
LEU
68
11
1_555
E
THR
73
A
THR
73
11
1_555
E
ASP
78
A
ASP
78
11
1_555
E
TYR
169
A
TYR
169
11
1_555
E
GLN
173
A
GLN
173
11
1_555
E
ASP
176
A
ASP
176
11
1_555
E
GLN
195
A
GLN
195
11
1_555
E
HOH
349
C
HOH
11
1_555
152
P 31 2 1