0.032169 0.000000 0.009413 0.000000 0.013182 0.000000 0.000000 0.000000 0.020106 0.00000 0.00000 0.00000 Beach, H. Cole, R. Gill, M.L. Loria, J.P. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 106.31 90.00 31.086 75.861 51.821 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C20 H27 N7 O20 P4 -2 809.358 5'-PHOSPHOTHYMIDINE (3'-5')-PYROPHOSPHATE ADENOSINE 3'-PHOSPHATE non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N P N 251 N O N 252 N O N 253 N O N 254 N P N 255 N O N 256 N O N 257 N O N 258 N P N 259 N O N 260 N O N 261 N O Y 262 N N Y 263 N C Y 264 N N Y 265 N C Y 266 N N Y 267 N C N 268 N N Y 269 N C Y 270 N N Y 271 N C N 272 N C N 273 R C N 274 N O N 275 R C N 276 R C N 277 N O N 278 S C N 279 N O N 280 N O N 281 N C N 282 R C N 283 N O N 284 R C N 285 N C N 286 S C N 287 N O N 288 N P N 289 N O N 290 N O N 291 N O Y 292 N N Y 293 N C Y 294 N C N 295 N O Y 296 N N Y 297 N C N 298 N O Y 299 N C N 300 N C N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N N N 329 S C N 330 N C N 331 N O N 332 N C Y 333 N C Y 334 N C Y 335 N C Y 336 N C Y 337 N C Y 338 N C N 339 N O N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N N N 352 S C N 353 N C N 354 N O N 355 N C N 356 N C N 357 N C N 358 N O N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N N N 369 S C N 370 N C N 371 N O N 372 N C N 373 N O N 374 N O N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N N N 383 S C N 384 N C N 385 N O N 386 R C N 387 N O N 388 N C N 389 N O N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N N N 400 S C N 401 N C N 402 N O N 403 N C Y 404 N C Y 405 N C Y 406 N C Y 407 N C Y 408 N C Y 409 N C N 410 N O N 411 N O N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N N N 424 S C N 425 N C N 426 N O N 427 N C N 428 N C N 429 N C N 430 N O N 431 N H N 432 N H N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N doub N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N doub N 249 N sing N 250 N sing Y 251 N sing Y 252 N sing N 253 N sing Y 254 N doub Y 255 N sing Y 256 N sing Y 257 N doub N 258 N sing Y 259 N sing N 260 N sing Y 261 N doub N 262 N sing N 263 N sing Y 264 N sing Y 265 N doub N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N doub N 302 N sing Y 303 N sing Y 304 N sing Y 305 N doub N 306 N sing N 307 N doub Y 308 N sing Y 309 N sing N 310 N sing N 311 N doub Y 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N doub N 326 N sing N 327 N sing N 328 N sing N 329 N sing Y 330 N doub Y 331 N sing Y 332 N sing N 333 N sing Y 334 N doub N 335 N sing Y 336 N doub N 337 N sing Y 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N doub N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N doub N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N doub N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N doub N 395 N sing N 396 N sing N 397 N sing N 398 N sing Y 399 N doub Y 400 N sing Y 401 N sing N 402 N sing Y 403 N doub N 404 N sing Y 405 N doub N 406 N sing Y 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N doub N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing US J.Am.Chem.Soc. JACSAT 0004 0002-7863 127 9167 9176 10.1021/ja0514949 15969595 Conservation of mus-ms enzyme motions in the apo- and substrate-mimicked state. 2005 10.2210/pdb1u1b/pdb pdb_00001u1b 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 298 1 CCD 2003-10-09 Nonius Kappa CCD graphite SINGLE WAVELENGTH M x-ray 1 0.7107 1.0 0.7107 SEALED TUBE OTHER 13708.326 Ribonuclease, pancreatic 3.1.27.5 2 man polymer 809.358 5'-PHOSPHOTHYMIDINE (3'-5')-PYROPHOSPHATE ADENOSINE 3'-PHOSPHATE 2 syn non-polymer 18.015 water 72 nat water RNase 1, RNase A no no KETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMS ITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV KETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMS ITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n cattle Bos Escherichia Escherichia coli sample RNASE1 9913 Bos taurus 469008 Escherichia coli BL21(DE3) BL21(DE3) PLASMID pBXR 1 2.187 41.60 VAPOR DIFFUSION, HANGING DROP 5.5 27% PEG 4000, 20 mM sodium citrate, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K 298 diffrn_source chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_site repository Initial release Version format compliance Version format compliance Data collection Data collection Database references Derived calculations Refinement description 1 0 2005-06-28 1 1 2008-04-30 1 2 2011-07-13 1 3 2018-04-04 1 4 2023-08-23 _diffrn_source.type _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Crystal Structure Of Ribonuclease A In Complex With 5'-Phospho-2'-Deoxyuridine-3'-Pyrophosphate Adenosine-3'-Phosphate RCSB Y RCSB 2004-07-15 REL REL PAX 5'-PHOSPHOTHYMIDINE (3'-5')-PYROPHOSPHATE ADENOSINE 3'-PHOSPHATE HOH water 1QHC PDB ENTRY 1QHC PDB experimental model PTA 901 2 PAX PAX 901 A PTA 902 2 PAX PAX 902 B HOH 2 3 HOH HOH 902 A HOH 4 3 HOH HOH 903 A HOH 5 3 HOH HOH 904 A HOH 9 3 HOH HOH 905 A HOH 10 3 HOH HOH 906 A HOH 12 3 HOH HOH 907 A HOH 13 3 HOH HOH 908 A HOH 14 3 HOH HOH 909 A HOH 18 3 HOH HOH 910 A HOH 19 3 HOH HOH 911 A HOH 20 3 HOH HOH 912 A HOH 21 3 HOH HOH 913 A HOH 23 3 HOH HOH 914 A HOH 24 3 HOH HOH 915 A HOH 25 3 HOH HOH 916 A HOH 28 3 HOH HOH 917 A HOH 29 3 HOH HOH 918 A HOH 33 3 HOH HOH 919 A HOH 35 3 HOH HOH 920 A HOH 37 3 HOH HOH 921 A HOH 38 3 HOH HOH 922 A HOH 39 3 HOH HOH 923 A HOH 40 3 HOH HOH 924 A HOH 41 3 HOH HOH 925 A HOH 42 3 HOH HOH 926 A HOH 43 3 HOH HOH 927 A HOH 44 3 HOH HOH 928 A HOH 45 3 HOH HOH 929 A HOH 46 3 HOH HOH 930 A HOH 47 3 HOH HOH 931 A HOH 48 3 HOH HOH 932 A HOH 49 3 HOH HOH 933 A HOH 50 3 HOH HOH 934 A HOH 53 3 HOH HOH 935 A HOH 55 3 HOH HOH 936 A HOH 56 3 HOH HOH 937 A HOH 58 3 HOH HOH 938 A HOH 61 3 HOH HOH 939 A HOH 63 3 HOH HOH 940 A HOH 64 3 HOH HOH 941 A HOH 65 3 HOH HOH 942 A HOH 66 3 HOH HOH 943 A HOH 72 3 HOH HOH 944 A HOH 74 3 HOH HOH 945 A HOH 1 3 HOH HOH 903 B HOH 3 3 HOH HOH 904 B HOH 6 3 HOH HOH 905 B HOH 7 3 HOH HOH 906 B HOH 11 3 HOH HOH 907 B HOH 17 3 HOH HOH 908 B HOH 22 3 HOH HOH 909 B HOH 26 3 HOH HOH 910 B HOH 27 3 HOH HOH 911 B HOH 30 3 HOH HOH 912 B HOH 31 3 HOH HOH 913 B HOH 51 3 HOH HOH 914 B HOH 52 3 HOH HOH 915 B HOH 54 3 HOH HOH 916 B HOH 57 3 HOH HOH 917 B HOH 59 3 HOH HOH 918 B HOH 60 3 HOH HOH 919 B HOH 68 3 HOH HOH 920 B HOH 69 3 HOH HOH 921 B HOH 70 3 HOH HOH 922 B HOH 71 3 HOH HOH 923 B HOH 73 3 HOH HOH 924 B HOH 75 3 HOH HOH 925 B HOH 76 3 HOH HOH 926 B HOH 77 3 HOH HOH 927 B HOH 79 3 HOH HOH 928 B HOH 80 3 HOH HOH 929 B HOH 81 3 HOH HOH 930 B LYS 1 n 1 LYS 1 A GLU 2 n 2 GLU 2 A THR 3 n 3 THR 3 A ALA 4 n 4 ALA 4 A ALA 5 n 5 ALA 5 A ALA 6 n 6 ALA 6 A LYS 7 n 7 LYS 7 A PHE 8 n 8 PHE 8 A GLU 9 n 9 GLU 9 A ARG 10 n 10 ARG 10 A GLN 11 n 11 GLN 11 A HIS 12 n 12 HIS 12 A MET 13 n 13 MET 13 A ASP 14 n 14 ASP 14 A SER 15 n 15 SER 15 A SER 16 n 16 SER 16 A THR 17 n 17 THR 17 A SER 18 n 18 SER 18 A ALA 19 n 19 ALA 19 A ALA 20 n 20 ALA 20 A SER 21 n 21 SER 21 A SER 22 n 22 SER 22 A SER 23 n 23 SER 23 A ASN 24 n 24 ASN 24 A TYR 25 n 25 TYR 25 A CYS 26 n 26 CYS 26 A ASN 27 n 27 ASN 27 A GLN 28 n 28 GLN 28 A MET 29 n 29 MET 29 A MET 30 n 30 MET 30 A LYS 31 n 31 LYS 31 A SER 32 n 32 SER 32 A ARG 33 n 33 ARG 33 A ASN 34 n 34 ASN 34 A LEU 35 n 35 LEU 35 A THR 36 n 36 THR 36 A LYS 37 n 37 LYS 37 A ASP 38 n 38 ASP 38 A ARG 39 n 39 ARG 39 A CYS 40 n 40 CYS 40 A LYS 41 n 41 LYS 41 A PRO 42 n 42 PRO 42 A VAL 43 n 43 VAL 43 A ASN 44 n 44 ASN 44 A THR 45 n 45 THR 45 A PHE 46 n 46 PHE 46 A VAL 47 n 47 VAL 47 A HIS 48 n 48 HIS 48 A GLU 49 n 49 GLU 49 A SER 50 n 50 SER 50 A LEU 51 n 51 LEU 51 A ALA 52 n 52 ALA 52 A ASP 53 n 53 ASP 53 A VAL 54 n 54 VAL 54 A GLN 55 n 55 GLN 55 A ALA 56 n 56 ALA 56 A VAL 57 n 57 VAL 57 A CYS 58 n 58 CYS 58 A SER 59 n 59 SER 59 A GLN 60 n 60 GLN 60 A LYS 61 n 61 LYS 61 A ASN 62 n 62 ASN 62 A VAL 63 n 63 VAL 63 A ALA 64 n 64 ALA 64 A CYS 65 n 65 CYS 65 A LYS 66 n 66 LYS 66 A ASN 67 n 67 ASN 67 A GLY 68 n 68 GLY 68 A GLN 69 n 69 GLN 69 A THR 70 n 70 THR 70 A ASN 71 n 71 ASN 71 A CYS 72 n 72 CYS 72 A TYR 73 n 73 TYR 73 A GLN 74 n 74 GLN 74 A SER 75 n 75 SER 75 A TYR 76 n 76 TYR 76 A SER 77 n 77 SER 77 A THR 78 n 78 THR 78 A MET 79 n 79 MET 79 A SER 80 n 80 SER 80 A ILE 81 n 81 ILE 81 A THR 82 n 82 THR 82 A ASP 83 n 83 ASP 83 A CYS 84 n 84 CYS 84 A ARG 85 n 85 ARG 85 A GLU 86 n 86 GLU 86 A THR 87 n 87 THR 87 A GLY 88 n 88 GLY 88 A SER 89 n 89 SER 89 A SER 90 n 90 SER 90 A LYS 91 n 91 LYS 91 A TYR 92 n 92 TYR 92 A PRO 93 n 93 PRO 93 A ASN 94 n 94 ASN 94 A CYS 95 n 95 CYS 95 A ALA 96 n 96 ALA 96 A TYR 97 n 97 TYR 97 A LYS 98 n 98 LYS 98 A THR 99 n 99 THR 99 A THR 100 n 100 THR 100 A GLN 101 n 101 GLN 101 A ALA 102 n 102 ALA 102 A ASN 103 n 103 ASN 103 A LYS 104 n 104 LYS 104 A HIS 105 n 105 HIS 105 A ILE 106 n 106 ILE 106 A ILE 107 n 107 ILE 107 A VAL 108 n 108 VAL 108 A ALA 109 n 109 ALA 109 A CYS 110 n 110 CYS 110 A GLU 111 n 111 GLU 111 A GLY 112 n 112 GLY 112 A ASN 113 n 113 ASN 113 A PRO 114 n 114 PRO 114 A TYR 115 n 115 TYR 115 A VAL 116 n 116 VAL 116 A PRO 117 n 117 PRO 117 A VAL 118 n 118 VAL 118 A HIS 119 n 119 HIS 119 A PHE 120 n 120 PHE 120 A ASP 121 n 121 ASP 121 A ALA 122 n 122 ALA 122 A SER 123 n 123 SER 123 A VAL 124 n 124 VAL 124 A LYS 1 n 1 LYS 1 B GLU 2 n 2 GLU 2 B THR 3 n 3 THR 3 B ALA 4 n 4 ALA 4 B ALA 5 n 5 ALA 5 B ALA 6 n 6 ALA 6 B LYS 7 n 7 LYS 7 B PHE 8 n 8 PHE 8 B GLU 9 n 9 GLU 9 B ARG 10 n 10 ARG 10 B GLN 11 n 11 GLN 11 B HIS 12 n 12 HIS 12 B MET 13 n 13 MET 13 B ASP 14 n 14 ASP 14 B SER 15 n 15 SER 15 B SER 16 n 16 SER 16 B THR 17 n 17 THR 17 B SER 18 n 18 SER 18 B ALA 19 n 19 ALA 19 B ALA 20 n 20 ALA 20 B SER 21 n 21 SER 21 B SER 22 n 22 SER 22 B SER 23 n 23 SER 23 B ASN 24 n 24 ASN 24 B TYR 25 n 25 TYR 25 B CYS 26 n 26 CYS 26 B ASN 27 n 27 ASN 27 B GLN 28 n 28 GLN 28 B MET 29 n 29 MET 29 B MET 30 n 30 MET 30 B LYS 31 n 31 LYS 31 B SER 32 n 32 SER 32 B ARG 33 n 33 ARG 33 B ASN 34 n 34 ASN 34 B LEU 35 n 35 LEU 35 B THR 36 n 36 THR 36 B LYS 37 n 37 LYS 37 B ASP 38 n 38 ASP 38 B ARG 39 n 39 ARG 39 B CYS 40 n 40 CYS 40 B LYS 41 n 41 LYS 41 B PRO 42 n 42 PRO 42 B VAL 43 n 43 VAL 43 B ASN 44 n 44 ASN 44 B THR 45 n 45 THR 45 B PHE 46 n 46 PHE 46 B VAL 47 n 47 VAL 47 B HIS 48 n 48 HIS 48 B GLU 49 n 49 GLU 49 B SER 50 n 50 SER 50 B LEU 51 n 51 LEU 51 B ALA 52 n 52 ALA 52 B ASP 53 n 53 ASP 53 B VAL 54 n 54 VAL 54 B GLN 55 n 55 GLN 55 B ALA 56 n 56 ALA 56 B VAL 57 n 57 VAL 57 B CYS 58 n 58 CYS 58 B SER 59 n 59 SER 59 B GLN 60 n 60 GLN 60 B LYS 61 n 61 LYS 61 B ASN 62 n 62 ASN 62 B VAL 63 n 63 VAL 63 B ALA 64 n 64 ALA 64 B CYS 65 n 65 CYS 65 B LYS 66 n 66 LYS 66 B ASN 67 n 67 ASN 67 B GLY 68 n 68 GLY 68 B GLN 69 n 69 GLN 69 B THR 70 n 70 THR 70 B ASN 71 n 71 ASN 71 B CYS 72 n 72 CYS 72 B TYR 73 n 73 TYR 73 B GLN 74 n 74 GLN 74 B SER 75 n 75 SER 75 B TYR 76 n 76 TYR 76 B SER 77 n 77 SER 77 B THR 78 n 78 THR 78 B MET 79 n 79 MET 79 B SER 80 n 80 SER 80 B ILE 81 n 81 ILE 81 B THR 82 n 82 THR 82 B ASP 83 n 83 ASP 83 B CYS 84 n 84 CYS 84 B ARG 85 n 85 ARG 85 B GLU 86 n 86 GLU 86 B THR 87 n 87 THR 87 B GLY 88 n 88 GLY 88 B SER 89 n 89 SER 89 B SER 90 n 90 SER 90 B LYS 91 n 91 LYS 91 B TYR 92 n 92 TYR 92 B PRO 93 n 93 PRO 93 B ASN 94 n 94 ASN 94 B CYS 95 n 95 CYS 95 B ALA 96 n 96 ALA 96 B TYR 97 n 97 TYR 97 B LYS 98 n 98 LYS 98 B THR 99 n 99 THR 99 B THR 100 n 100 THR 100 B GLN 101 n 101 GLN 101 B ALA 102 n 102 ALA 102 B ASN 103 n 103 ASN 103 B LYS 104 n 104 LYS 104 B HIS 105 n 105 HIS 105 B ILE 106 n 106 ILE 106 B ILE 107 n 107 ILE 107 B VAL 108 n 108 VAL 108 B ALA 109 n 109 ALA 109 B CYS 110 n 110 CYS 110 B GLU 111 n 111 GLU 111 B GLY 112 n 112 GLY 112 B ASN 113 n 113 ASN 113 B PRO 114 n 114 PRO 114 B TYR 115 n 115 TYR 115 B VAL 116 n 116 VAL 116 B PRO 117 n 117 PRO 117 B VAL 118 n 118 VAL 118 B HIS 119 n 119 HIS 119 B PHE 120 n 120 PHE 120 B ASP 121 n 121 ASP 121 B ALA 122 n 122 ALA 122 B SER 123 n 123 SER 123 B VAL 124 n 124 VAL 124 B author_defined_assembly 1 monomeric author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ASN 44 A N ASN 44 A O CYS 84 A O CYS 84 A N MET 79 A N MET 79 A O LYS 104 A O LYS 104 A O VAL 108 A O VAL 108 A N TYR 73 A N TYR 73 A O GLN 74 A O GLN 74 A N LYS 61 A N LYS 61 A N ASN 44 A N ASN 44 A O CYS 84 A O CYS 84 A N MET 79 A N MET 79 A O LYS 104 A O LYS 104 A N HIS 105 A N HIS 105 A O VAL 124 A O VAL 124 B N PHE 46 B N PHE 46 B O THR 82 B O THR 82 B N ILE 81 B N ILE 81 B O ALA 102 B O ALA 102 B N VAL 63 B N VAL 63 B O CYS 72 B O CYS 72 B N TYR 73 B N TYR 73 B O VAL 108 B O VAL 108 B N ALA 109 B N ALA 109 B O VAL 118 B O VAL 118 1 A SER 21 -68.99 -102.61 1 A HIS 48 -102.91 63.03 1 A GLN 60 -105.32 -146.87 1 B ALA 20 -69.52 98.38 1 B SER 21 -56.57 -99.92 1 B SER 23 -69.80 1.06 1 B THR 36 -146.24 28.16 1 B ARG 39 176.27 159.79 1 B GLN 60 -107.91 -137.07 1 B PRO 93 -84.83 44.20 1 B ASN 113 -50.75 -87.64 PROTEIN_REP.PARAM PROTEIN.TOP PTPPAP.PARAM PTPPAP.TOP WATER_REP.PARAM WATER.TOP 28.4 5.71 0.00 2.38 -3.44 0.00 -2.27 0.258 0.007 0.218 0.218 0.218 2.00 17.73 1459 15654 14938 9.8 95.5 RANDOM 25477.30 0.000000 1 RESTRAINED THROUGHOUT 0.0 0.0 MOLECULAR REPLACEMENT PDB ENTRY 1QHC Engh & Huber FLAT MODEL 73.9573 0.503643 0.31 0.25 5.00 0.32 0.24 2.00 17.73 72 2076 102 0 1902 0.008 1.3 23.4 0.86 0.349 0.023 0.279 2.13 230 2119 6 9.8 91.3 12.0 2.0 19.6 1U1B 15654 14950 0.0 0.0 0.092 1 16.1 2.0 2.13 91.3 refinement CNS 1.1 data reduction DENZO data scaling SCALEPACK phasing CNS Structure of bovine pancreatic Ribonuclease A in complex with 3'-phosphothymidine (3'-5')-pyrophosphate adenosine 3'-phosphate 1 N N 1 N N 2 N N 2 N N 3 N N 3 N N A THR 3 A THR 3 HELX_P A MET 13 A MET 13 1 1 11 A ASN 24 A ASN 24 HELX_P A ARG 33 A ARG 33 1 2 10 A SER 50 A SER 50 HELX_P A ALA 56 A ALA 56 1 3 7 A VAL 57 A VAL 57 HELX_P A GLN 60 A GLN 60 5 4 4 B THR 3 B THR 3 HELX_P B MET 13 B MET 13 1 5 11 B ASN 24 B ASN 24 HELX_P B ARG 33 B ARG 33 1 6 10 B SER 50 B SER 50 HELX_P B ALA 56 B ALA 56 1 7 7 B VAL 57 B VAL 57 HELX_P B GLN 60 B GLN 60 5 8 4 disulf 2.028 A CYS 26 A SG CYS 26 1_555 A CYS 84 A SG CYS 84 1_555 disulf 2.025 A CYS 40 A SG CYS 40 1_555 A CYS 95 A SG CYS 95 1_555 disulf 2.022 A CYS 58 A SG CYS 58 1_555 A CYS 110 A SG CYS 110 1_555 disulf 2.030 A CYS 65 A SG CYS 65 1_555 A CYS 72 A SG CYS 72 1_555 disulf 2.030 B CYS 26 B SG CYS 26 1_555 B CYS 84 B SG CYS 84 1_555 disulf 2.029 B CYS 40 B SG CYS 40 1_555 B CYS 95 B SG CYS 95 1_555 disulf 2.022 B CYS 58 B SG CYS 58 1_555 B CYS 110 B SG CYS 110 1_555 disulf 2.035 B CYS 65 B SG CYS 65 1_555 B CYS 72 B SG CYS 72 1_555 HYDROLASE HYDROLASE, RIBONUCLEASE, ENDONUCLEASE, NUCLEOTIDE INHIBITOR A TYR 92 A TYR 92 1 A PRO 93 A PRO 93 0.29 A ASN 113 A ASN 113 1 A PRO 114 A PRO 114 0.26 B TYR 92 B TYR 92 1 B PRO 93 B PRO 93 0.02 RNAS1_BOVIN UNP 1 27 P61823 KETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMS ITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV 27 150 1U1B 1 124 P61823 A 1 1 124 27 150 1U1B 1 124 P61823 B 1 1 124 5 4 3 4 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A VAL 43 A VAL 43 A VAL 47 A VAL 47 A MET 79 A MET 79 A GLU 86 A GLU 86 A TYR 97 A TYR 97 A GLU 111 A GLU 111 A CYS 72 A CYS 72 A GLN 74 A GLN 74 A LYS 61 A LYS 61 A VAL 63 A VAL 63 A VAL 43 A VAL 43 A VAL 47 A VAL 47 A MET 79 A MET 79 A GLU 86 A GLU 86 A TYR 97 A TYR 97 A GLU 111 A GLU 111 A VAL 116 A VAL 116 A VAL 124 A VAL 124 B VAL 43 B VAL 43 B VAL 47 B VAL 47 B MET 79 B MET 79 B GLU 86 B GLU 86 B TYR 97 B TYR 97 B LYS 104 B LYS 104 B LYS 61 B LYS 61 B VAL 63 B VAL 63 B CYS 72 B CYS 72 B GLN 74 B GLN 74 B ILE 106 B ILE 106 B GLU 111 B GLU 111 B VAL 116 B VAL 116 B SER 123 B SER 123 BINDING SITE FOR RESIDUE PAX A 901 A PAX 901 Software 17 BINDING SITE FOR RESIDUE PAX B 902 B PAX 902 Software 17 A LYS 7 A LYS 7 17 1_555 A GLN 11 A GLN 11 17 1_555 A HIS 12 A HIS 12 17 1_555 A VAL 43 A VAL 43 17 1_555 A ASN 44 A ASN 44 17 1_555 A THR 45 A THR 45 17 1_555 A CYS 65 A CYS 65 17 1_555 A ASN 67 A ASN 67 17 1_555 A GLN 69 A GLN 69 17 1_555 A ASN 71 A ASN 71 17 1_555 A HIS 105 A HIS 105 17 1_455 A ALA 109 A ALA 109 17 1_555 A GLU 111 A GLU 111 17 1_555 A VAL 118 A VAL 118 17 1_555 A HIS 119 A HIS 119 17 1_555 A PHE 120 A PHE 120 17 1_555 A HOH 929 E HOH 17 1_555 B LYS 7 B LYS 7 17 1_555 B GLN 11 B GLN 11 17 1_555 B HIS 12 B HIS 12 17 1_555 B LYS 41 B LYS 41 17 1_555 B VAL 43 B VAL 43 17 1_555 B ASN 44 B ASN 44 17 1_555 B THR 45 B THR 45 17 1_555 B CYS 65 B CYS 65 17 1_555 B ASN 67 B ASN 67 17 1_555 B GLN 69 B GLN 69 17 1_555 B ASN 71 B ASN 71 17 1_555 B HIS 105 B HIS 105 17 1_455 B ALA 109 B ALA 109 17 1_555 B GLU 111 B GLU 111 17 1_555 B VAL 118 B VAL 118 17 1_555 B HIS 119 B HIS 119 17 1_555 B PHE 120 B PHE 120 17 1_555 4 P 1 21 1