0.022727 0.000000 0.000000 0.000000 0.015221 0.000000 0.000000 0.000000 0.008540 0.00000 0.00000 0.00000 Houbaviy, H.B. Usheva, A. Shenk, T. 0000-0002-2487-9713 Burley, S.K. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 44.000 65.700 117.100 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N O N 89 N P N 90 N O N 91 N O N 92 N O N 93 N C N 94 R C N 95 N O N 96 S C N 97 N O N 98 N C N 99 R C Y 100 N N Y 101 N C Y 102 N N Y 103 N C Y 104 N C N 105 N N Y 106 N N Y 107 N C Y 108 N N Y 109 N C N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N O N 125 N P N 126 N O N 127 N O N 128 N O N 129 N C N 130 R C N 131 N O N 132 S C N 133 N O N 134 N C N 135 R C N 136 N N N 137 N C N 138 N O N 139 N N N 140 N C N 141 N N N 142 N C N 143 N C N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N P N 160 N O N 161 N O N 162 N O N 163 N C N 164 R C N 165 N O N 166 S C N 167 N O N 168 N C N 169 R C Y 170 N N Y 171 N C Y 172 N N Y 173 N C N 174 N C N 175 N O N 176 N N N 177 N C N 178 N N N 179 N N Y 180 N C N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N O N 196 N P N 197 N O N 198 N O N 199 N O N 200 N C N 201 R C N 202 N O N 203 S C N 204 N O N 205 N C N 206 R C N 207 N N N 208 N C N 209 N O N 210 N N N 211 N C N 212 N O N 213 N C N 214 N C N 215 N C N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N N N 232 S C N 233 N C N 234 N O N 235 N C N 236 N C N 237 N C N 238 N O N 239 N N N 240 N O N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N N N 252 S C N 253 N C N 254 N O N 255 N C N 256 N C N 257 N C N 258 N O N 259 N O N 260 N O N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N N N 271 N C N 272 N C N 273 N O N 274 N O N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N N N 281 S C N 282 N C N 283 N O N 284 N C Y 285 N C Y 286 N N Y 287 N C Y 288 N C Y 289 N N N 290 N O N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N O N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 S C N 309 N C N 310 N C N 311 N C N 312 N O N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N N N 327 S C N 328 N C N 329 N O N 330 N C N 331 N C N 332 N C N 333 N C N 334 N O N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C N 353 N C N 354 N C N 355 N C N 356 N N N 357 N O N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N N N 374 S C N 375 N C N 376 N O N 377 N C N 378 N C N 379 N S N 380 N C N 381 N O N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N N N 394 S C N 395 N C N 396 N O N 397 N C Y 398 N C Y 399 N C Y 400 N C Y 401 N C Y 402 N C Y 403 N C N 404 N O N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N N N 417 S C N 418 N C N 419 N O N 420 N C N 421 N C N 422 N C N 423 N O N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N N N 434 S C N 435 N C N 436 N O N 437 N C N 438 N O N 439 N O N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N N N 448 S C N 449 N C N 450 N O N 451 R C N 452 N O N 453 N C N 454 N O N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N N N 465 S C N 466 N C N 467 N O N 468 N C Y 469 N C Y 470 N C Y 471 N C Y 472 N C Y 473 N C Y 474 N C N 475 N O N 476 N O N 477 N H N 478 N H N 479 N H N 480 N H N 481 N H N 482 N H N 483 N H N 484 N H N 485 N H N 486 N H N 487 N H N 488 N N N 489 S C N 490 N C N 491 N O N 492 N C N 493 N C N 494 N C N 495 N O N 496 N H N 497 N H N 498 N H N 499 N H N 500 N H N 501 N H N 502 N H N 503 N H N 504 N H N 505 N H N 506 N H N 507 N ZN N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing Y 106 N sing Y 107 N sing Y 108 N doub N 109 N sing Y 110 N sing Y 111 N sing Y 112 N doub N 113 N sing Y 114 N doub N 115 N sing N 116 N sing Y 117 N sing Y 118 N doub N 119 N sing Y 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing Y 179 N sing Y 180 N sing Y 181 N doub N 182 N sing Y 183 N sing N 184 N sing Y 185 N doub N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N doub N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N doub N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N doub N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N doub N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N doub N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N doub N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N doub N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N doub N 285 N sing N 286 N sing N 287 N sing N 288 N sing Y 289 N sing Y 290 N doub Y 291 N doub N 292 N sing Y 293 N sing N 294 N sing Y 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N doub N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N doub N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N doub N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N doub N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N doub N 393 N sing N 394 N sing N 395 N sing N 396 N sing Y 397 N doub Y 398 N sing Y 399 N sing N 400 N sing Y 401 N doub N 402 N sing Y 403 N doub N 404 N sing Y 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N doub N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N doub N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N doub N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N doub N 462 N sing N 463 N sing N 464 N sing N 465 N sing Y 466 N doub Y 467 N sing Y 468 N sing N 469 N sing Y 470 N doub N 471 N sing Y 472 N doub N 473 N sing Y 474 N sing N 475 N sing N 476 N sing N 477 N sing N 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N doub N 486 N sing N 487 N sing N 488 N sing N 489 N sing N 490 N sing N 491 N sing N 492 N sing N 493 N sing N 494 N sing N 495 N sing N 496 N sing US Proc.Natl.Acad.Sci.USA PNASA6 0040 0027-8424 93 13577 13582 10.1073/pnas.93.24.13577 8942976 Cocrystal structure of YY1 bound to the adeno-associated virus P5 initiator. 1996 0000-0002-2487-9713 10.2210/pdb1ubd/pdb pdb_00001ubd 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 IMAGE PLATE 1995-06-16 MARRESEARCH SINGLE WAVELENGTH M x-ray 1 1.0 X12B NSLS SYNCHROTRON NSLS BEAMLINE X12B 6164.989 DNA (5'-D(*AP*GP*GP*GP*TP*CP*TP*CP*CP*AP*TP*TP*TP*TP*GP*AP*A P*GP*CP*G)-3') 1 syn polymer 6102.968 DNA (5'-D(*CP*GP*CP*TP*TP*CP*AP*AP*AP*AP*TP*GP*GP*AP*GP*AP*C P*CP*CP*T)-3') 1 syn polymer 14189.473 PROTEIN (YY1 ZINC FINGER DOMAIN) 1 man polymer 65.409 ZINC ION 4 syn non-polymer 18.015 water 87 nat water MUTANT D291M, A292E no no (DA)(DG)(DG)(DG)(DT)(DC)(DT)(DC)(DC)(DA)(DT)(DT)(DT)(DT)(DG)(DA)(DA)(DG)(DC)(DG) AGGGTCTCCATTTTGAAGCG A polydeoxyribonucleotide no no (DC)(DG)(DC)(DT)(DT)(DC)(DA)(DA)(DA)(DA)(DT)(DG)(DG)(DA)(DG)(DA)(DC)(DC)(DC)(DT) CGCTTCAAAATGGAGACCCT B polydeoxyribonucleotide no no MEPRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ MEPRTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNL RTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ C polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia sample 9606 Homo sapiens 562 Escherichia coli 3.14 60.84 -6.921 1 20 A 1 B 40 -25.004 A_DA1:DT40_B 1 -6.099 2.051 0.178 -0.188 13.461 1 19 A 2 B 39 -3.659 A_DG2:DC39_B 2 6.830 0.926 0.413 -0.352 6.228 1 19 A 3 B 38 -3.166 A_DG3:DC38_B 3 -3.808 0.437 0.417 -0.314 9.476 1 19 A 4 B 37 -3.528 A_DG4:DC37_B 4 -14.708 -0.269 0.349 -0.273 1.007 1 20 A 5 B 36 -1.992 A_DT5:DA36_B 5 -15.345 0.021 0.421 -0.404 -17.777 1 19 A 6 B 35 -2.152 A_DC6:DG35_B 6 -18.049 -0.091 0.791 -0.362 -7.508 1 20 A 7 B 34 2.360 A_DT7:DA34_B 7 -13.400 -0.845 0.328 -0.115 -2.653 1 19 A 8 B 33 -2.592 A_DC8:DG33_B 8 -8.736 0.610 0.211 -0.218 -2.521 1 19 A 9 B 32 0.358 A_DC9:DG32_B 9 -6.564 0.144 0.235 -0.262 8.787 1 20 A 10 B 31 -3.250 A_DA10:DT31_B 10 -9.813 0.503 -0.109 -0.235 -6.459 1 20 A 11 B 30 2.117 A_DT11:DA30_B 11 -19.007 0.109 -0.352 -0.348 -4.439 1 20 A 12 B 29 6.274 A_DT12:DA29_B 12 -15.929 -0.019 -0.439 -0.067 -1.626 1 20 A 13 B 28 3.046 A_DT13:DA28_B 13 -11.965 0.151 -0.148 -0.163 4.614 1 20 A 14 B 27 1.194 A_DT14:DA27_B 14 -20.236 -0.870 0.024 -0.230 -11.452 1 19 A 15 B 26 -2.066 A_DG15:DC26_B 15 -15.425 0.256 -0.799 -0.463 5.576 1 20 A 16 B 25 7.825 A_DA16:DT25_B 16 -9.324 -0.430 0.120 -0.256 -4.508 1 20 A 17 B 24 -16.954 A_DA17:DT24_B 17 -5.332 1.407 0.355 -0.142 -3.557 1 19 A 18 B 23 -0.474 A_DG18:DC23_B 18 -5.642 0.257 0.356 -0.359 19.695 1 19 A 19 B 22 0.524 A_DC19:DG22_B 19 -8.981 -0.706 -0.479 -0.281 10.840 1 A 20 B 21 15.093 A_DG20:DC21_B 20 -16.819 1.589 0.989 0.285 2.743 27.172 A A 1 2 2.834 B B 40 39 2.803 1.328 0.513 0.508 AA_DA1DG2:DC39DT40_BB 1 -3.301 7.047 26.943 0.796 -1.800 3.616 35.606 A A 2 3 -1.147 B B 39 38 3.606 -0.701 -0.585 0.452 AA_DG2DG3:DC38DC39_BB 2 -1.427 2.334 35.571 0.851 0.727 3.096 31.167 A A 3 4 7.656 B B 38 37 3.103 4.100 -0.688 -0.127 AA_DG3DG4:DC37DC38_BB 3 -1.825 3.408 30.850 -0.980 0.948 3.680 36.086 A A 4 5 -13.403 B B 37 36 3.581 -8.233 0.432 -0.911 AA_DG4DT5:DA36DC37_BB 4 -1.032 1.680 35.150 -0.160 -0.862 3.799 40.927 A A 5 6 -1.109 B B 36 35 3.742 -0.774 0.694 -0.089 AA_DT5DC6:DG35DA36_BB 5 4.975 -7.131 40.629 -0.030 -0.362 2.892 29.018 A A 6 7 6.834 B B 35 34 2.967 3.417 -0.964 -0.338 AA_DC6DT7:DA34DG35_BB 6 0.469 -0.939 28.817 -1.350 2.016 3.059 39.003 A A 7 8 -9.283 B B 34 33 3.125 -6.171 0.602 -0.038 AA_DT7DC8:DG33DA34_BB 7 -2.106 3.168 38.475 0.653 -1.144 3.464 33.831 A A 8 9 3.268 B B 33 32 3.457 1.894 0.434 -0.255 AA_DC8DC9:DG32DG33_BB 8 5.254 -9.068 33.380 -0.765 0.158 2.814 38.465 A A 9 10 12.356 B B 32 31 2.875 8.076 -0.110 0.074 AA_DC9DA10:DT31DG32_BB 9 2.969 -4.542 37.526 -0.773 0.492 3.710 32.300 A A 10 11 1.475 B B 31 30 3.685 0.819 0.592 -0.617 AA_DA10DT11:DA30DT31_BB 10 3.376 -6.079 32.117 -1.274 -0.386 3.224 31.339 A A 11 12 -2.526 B B 30 29 3.210 -1.364 -0.131 -0.392 AA_DT11DT12:DA29DA30_BB 11 0.003 -0.006 31.310 -0.473 0.244 3.125 38.090 A A 12 13 7.126 B B 29 28 3.210 4.635 0.314 -0.227 AA_DT12DT13:DA28DA29_BB 12 -3.230 4.966 37.684 -0.919 -0.879 3.159 29.018 A A 13 14 -8.648 B B 28 27 3.086 -4.317 0.025 -0.734 AA_DT13DT14:DA27DA28_BB 13 1.079 -2.161 28.682 -0.553 0.179 3.551 39.257 A A 14 15 17.532 B B 27 26 3.862 11.597 -0.150 -0.417 AA_DT14DG15:DC26DA27_BB 14 3.880 -5.865 37.375 -2.229 0.761 2.719 34.674 A A 15 16 -2.232 B B 26 25 2.867 -1.309 0.024 0.054 AA_DG15DA16:DT25DC26_BB 15 -10.870 18.537 32.951 0.267 -1.503 3.528 43.807 A A 16 17 -7.960 B B 25 24 3.450 -5.921 -1.138 -0.586 AA_DA16DA17:DT24DT25_BB 16 -1.331 1.789 43.405 -0.181 1.389 3.069 30.942 A A 17 18 6.063 B B 24 23 3.176 3.227 0.661 -0.485 AA_DA17DG18:DC23DT24_BB 17 -1.758 3.302 30.728 -1.507 -1.564 2.750 20.773 A A 18 19 -17.757 B B 23 22 2.848 -5.966 0.191 -1.320 AA_DG18DC19:DG22DC23_BB 18 11.116 -33.084 16.537 -1.197 4.061 3.338 59.045 A A 19 20 1.226 B B 22 21 3.584 1.205 1.836 0.899 AA_DC19DG20:DC21DG22_BB 19 -8.228 8.372 58.509 0.846 -2.311 audit_author citation_author pdbx_struct_conn_angle struct_conn struct_site database_2 struct_ref_seq_dif chem_comp_atom chem_comp_bond repository Initial release Version format compliance Version format compliance Database references Derived calculations Structure summary Database references Data collection 1 0 1996-12-23 1 1 2008-05-22 1 2 2011-07-13 1 3 2021-02-03 1 4 2021-11-03 1 5 2024-02-14 _audit_author.identifier_ORCID _citation_author.identifier_ORCID _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details Y NDB 1996-10-04 REL ZN ZINC ION HOH water ZN 501 4 ZN ZN 501 C ZN 502 4 ZN ZN 502 C ZN 503 4 ZN ZN 503 C ZN 504 4 ZN ZN 504 C HOH 613 5 HOH HOH 613 A HOH 614 5 HOH HOH 614 A HOH 615 5 HOH HOH 615 A HOH 619 5 HOH HOH 619 A HOH 620 5 HOH HOH 620 A HOH 623 5 HOH HOH 623 A HOH 624 5 HOH HOH 624 A HOH 630 5 HOH HOH 630 A HOH 633 5 HOH HOH 633 A HOH 636 5 HOH HOH 636 A HOH 638 5 HOH HOH 638 A HOH 646 5 HOH HOH 646 A HOH 652 5 HOH HOH 652 A HOH 654 5 HOH HOH 654 A HOH 655 5 HOH HOH 655 A HOH 660 5 HOH HOH 660 A HOH 685 5 HOH HOH 685 A HOH 687 5 HOH HOH 687 A HOH 690 5 HOH HOH 690 A HOH 691 5 HOH HOH 691 A HOH 695 5 HOH HOH 695 A HOH 696 5 HOH HOH 696 A HOH 601 5 HOH HOH 601 B HOH 604 5 HOH HOH 604 B HOH 605 5 HOH HOH 605 B HOH 607 5 HOH HOH 607 B HOH 610 5 HOH HOH 610 B HOH 616 5 HOH HOH 616 B HOH 625 5 HOH HOH 625 B HOH 626 5 HOH HOH 626 B HOH 628 5 HOH HOH 628 B HOH 629 5 HOH HOH 629 B HOH 632 5 HOH HOH 632 B HOH 635 5 HOH HOH 635 B HOH 640 5 HOH HOH 640 B HOH 645 5 HOH HOH 645 B HOH 651 5 HOH HOH 651 B HOH 669 5 HOH HOH 669 B HOH 671 5 HOH HOH 671 B HOH 672 5 HOH HOH 672 B HOH 676 5 HOH HOH 676 B HOH 682 5 HOH HOH 682 B HOH 683 5 HOH HOH 683 B HOH 686 5 HOH HOH 686 B HOH 688 5 HOH HOH 688 B HOH 689 5 HOH HOH 689 B HOH 693 5 HOH HOH 693 B HOH 600 5 HOH HOH 600 C HOH 603 5 HOH HOH 603 C HOH 608 5 HOH HOH 608 C HOH 609 5 HOH HOH 609 C HOH 611 5 HOH HOH 611 C HOH 612 5 HOH HOH 612 C HOH 617 5 HOH HOH 617 C HOH 618 5 HOH HOH 618 C HOH 621 5 HOH HOH 621 C HOH 622 5 HOH HOH 622 C HOH 631 5 HOH HOH 631 C HOH 637 5 HOH HOH 637 C HOH 639 5 HOH HOH 639 C HOH 642 5 HOH HOH 642 C HOH 643 5 HOH HOH 643 C HOH 644 5 HOH HOH 644 C HOH 647 5 HOH HOH 647 C HOH 649 5 HOH HOH 649 C HOH 650 5 HOH HOH 650 C HOH 656 5 HOH HOH 656 C HOH 657 5 HOH HOH 657 C HOH 658 5 HOH HOH 658 C HOH 659 5 HOH HOH 659 C HOH 661 5 HOH HOH 661 C HOH 663 5 HOH HOH 663 C HOH 664 5 HOH HOH 664 C HOH 665 5 HOH HOH 665 C HOH 668 5 HOH HOH 668 C HOH 670 5 HOH HOH 670 C HOH 673 5 HOH HOH 673 C HOH 674 5 HOH HOH 674 C HOH 675 5 HOH HOH 675 C HOH 677 5 HOH HOH 677 C HOH 678 5 HOH HOH 678 C HOH 679 5 HOH HOH 679 C HOH 681 5 HOH HOH 681 C HOH 684 5 HOH HOH 684 C HOH 692 5 HOH HOH 692 C HOH 694 5 HOH HOH 694 C HOH 698 5 HOH HOH 698 C A 1 n 1 DA 1 A G 2 n 2 DG 2 A G 3 n 3 DG 3 A G 4 n 4 DG 4 A T 5 n 5 DT 5 A C 6 n 6 DC 6 A T 7 n 7 DT 7 A C 8 n 8 DC 8 A C 9 n 9 DC 9 A A 10 n 10 DA 10 A T 11 n 11 DT 11 A T 12 n 12 DT 12 A T 13 n 13 DT 13 A T 14 n 14 DT 14 A G 15 n 15 DG 15 A A 16 n 16 DA 16 A A 17 n 17 DA 17 A G 18 n 18 DG 18 A C 19 n 19 DC 19 A G 20 n 20 DG 20 A C 21 n 1 DC 21 B G 22 n 2 DG 22 B C 23 n 3 DC 23 B T 24 n 4 DT 24 B T 25 n 5 DT 25 B C 26 n 6 DC 26 B A 27 n 7 DA 27 B A 28 n 8 DA 28 B A 29 n 9 DA 29 B A 30 n 10 DA 30 B T 31 n 11 DT 31 B G 32 n 12 DG 32 B G 33 n 13 DG 33 B A 34 n 14 DA 34 B G 35 n 15 DG 35 B A 36 n 16 DA 36 B C 37 n 17 DC 37 B C 38 n 18 DC 38 B C 39 n 19 DC 39 B T 40 n 20 DT 40 B n 1 291 C n 2 292 C n 3 293 C n 4 294 C THR 295 n 5 THR 295 C ILE 296 n 6 ILE 296 C ALA 297 n 7 ALA 297 C CYS 298 n 8 CYS 298 C PRO 299 n 9 PRO 299 C HIS 300 n 10 HIS 300 C LYS 301 n 11 LYS 301 C GLY 302 n 12 GLY 302 C CYS 303 n 13 CYS 303 C THR 304 n 14 THR 304 C LYS 305 n 15 LYS 305 C MET 306 n 16 MET 306 C PHE 307 n 17 PHE 307 C ARG 308 n 18 ARG 308 C ASP 309 n 19 ASP 309 C ASN 310 n 20 ASN 310 C SER 311 n 21 SER 311 C ALA 312 n 22 ALA 312 C MET 313 n 23 MET 313 C ARG 314 n 24 ARG 314 C LYS 315 n 25 LYS 315 C HIS 316 n 26 HIS 316 C LEU 317 n 27 LEU 317 C HIS 318 n 28 HIS 318 C THR 319 n 29 THR 319 C HIS 320 n 30 HIS 320 C GLY 321 n 31 GLY 321 C PRO 322 n 32 PRO 322 C ARG 323 n 33 ARG 323 C VAL 324 n 34 VAL 324 C HIS 325 n 35 HIS 325 C VAL 326 n 36 VAL 326 C CYS 327 n 37 CYS 327 C ALA 328 n 38 ALA 328 C GLU 329 n 39 GLU 329 C CYS 330 n 40 CYS 330 C GLY 331 n 41 GLY 331 C LYS 332 n 42 LYS 332 C ALA 333 n 43 ALA 333 C PHE 334 n 44 PHE 334 C VAL 335 n 45 VAL 335 C GLU 336 n 46 GLU 336 C SER 337 n 47 SER 337 C SER 338 n 48 SER 338 C LYS 339 n 49 LYS 339 C LEU 340 n 50 LEU 340 C LYS 341 n 51 LYS 341 C ARG 342 n 52 ARG 342 C HIS 343 n 53 HIS 343 C GLN 344 n 54 GLN 344 C LEU 345 n 55 LEU 345 C VAL 346 n 56 VAL 346 C HIS 347 n 57 HIS 347 C THR 348 n 58 THR 348 C GLY 349 n 59 GLY 349 C GLU 350 n 60 GLU 350 C LYS 351 n 61 LYS 351 C PRO 352 n 62 PRO 352 C PHE 353 n 63 PHE 353 C GLN 354 n 64 GLN 354 C CYS 355 n 65 CYS 355 C THR 356 n 66 THR 356 C PHE 357 n 67 PHE 357 C GLU 358 n 68 GLU 358 C GLY 359 n 69 GLY 359 C CYS 360 n 70 CYS 360 C GLY 361 n 71 GLY 361 C LYS 362 n 72 LYS 362 C ARG 363 n 73 ARG 363 C PHE 364 n 74 PHE 364 C SER 365 n 75 SER 365 C LEU 366 n 76 LEU 366 C ASP 367 n 77 ASP 367 C PHE 368 n 78 PHE 368 C ASN 369 n 79 ASN 369 C LEU 370 n 80 LEU 370 C ARG 371 n 81 ARG 371 C THR 372 n 82 THR 372 C HIS 373 n 83 HIS 373 C VAL 374 n 84 VAL 374 C ARG 375 n 85 ARG 375 C ILE 376 n 86 ILE 376 C HIS 377 n 87 HIS 377 C THR 378 n 88 THR 378 C GLY 379 n 89 GLY 379 C ASP 380 n 90 ASP 380 C ARG 381 n 91 ARG 381 C PRO 382 n 92 PRO 382 C TYR 383 n 93 TYR 383 C VAL 384 n 94 VAL 384 C CYS 385 n 95 CYS 385 C PRO 386 n 96 PRO 386 C PHE 387 n 97 PHE 387 C ASP 388 n 98 ASP 388 C GLY 389 n 99 GLY 389 C CYS 390 n 100 CYS 390 C ASN 391 n 101 ASN 391 C LYS 392 n 102 LYS 392 C LYS 393 n 103 LYS 393 C PHE 394 n 104 PHE 394 C ALA 395 n 105 ALA 395 C GLN 396 n 106 GLN 396 C SER 397 n 107 SER 397 C THR 398 n 108 THR 398 C ASN 399 n 109 ASN 399 C LEU 400 n 110 LEU 400 C LYS 401 n 111 LYS 401 C SER 402 n 112 SER 402 C HIS 403 n 113 HIS 403 C ILE 404 n 114 ILE 404 C LEU 405 n 115 LEU 405 C THR 406 n 116 THR 406 C HIS 407 n 117 HIS 407 C ALA 408 n 118 ALA 408 C n 119 409 C n 120 410 C n 121 411 C n 122 412 C n 123 413 C n 124 414 C author_defined_assembly 3 trimeric C CYS 298 C SG CYS 8 1_555 C ZN 501 D ZN ZN 1_555 C CYS 303 C SG CYS 13 1_555 110.4 C CYS 298 C SG CYS 8 1_555 C ZN 501 D ZN ZN 1_555 C HIS 316 C NE2 HIS 26 1_555 106.9 C CYS 303 C SG CYS 13 1_555 C ZN 501 D ZN ZN 1_555 C HIS 316 C NE2 HIS 26 1_555 109.3 C CYS 298 C SG CYS 8 1_555 C ZN 501 D ZN ZN 1_555 C HIS 320 C NE2 HIS 30 1_555 109.1 C CYS 303 C SG CYS 13 1_555 C ZN 501 D ZN ZN 1_555 C HIS 320 C NE2 HIS 30 1_555 110.9 C HIS 316 C NE2 HIS 26 1_555 C ZN 501 D ZN ZN 1_555 C HIS 320 C NE2 HIS 30 1_555 110.2 C CYS 327 C SG CYS 37 1_555 C ZN 502 E ZN ZN 1_555 C CYS 330 C SG CYS 40 1_555 112.6 C CYS 327 C SG CYS 37 1_555 C ZN 502 E ZN ZN 1_555 C HIS 343 C NE2 HIS 53 1_555 108.7 C CYS 330 C SG CYS 40 1_555 C ZN 502 E ZN ZN 1_555 C HIS 343 C NE2 HIS 53 1_555 107.2 C CYS 327 C SG CYS 37 1_555 C ZN 502 E ZN ZN 1_555 C HIS 347 C NE2 HIS 57 1_555 108.7 C CYS 330 C SG CYS 40 1_555 C ZN 502 E ZN ZN 1_555 C HIS 347 C NE2 HIS 57 1_555 111.6 C HIS 343 C NE2 HIS 53 1_555 C ZN 502 E ZN ZN 1_555 C HIS 347 C NE2 HIS 57 1_555 107.9 C CYS 355 C SG CYS 65 1_555 C ZN 503 F ZN ZN 1_555 C CYS 360 C SG CYS 70 1_555 110.2 C CYS 355 C SG CYS 65 1_555 C ZN 503 F ZN ZN 1_555 C HIS 373 C NE2 HIS 83 1_555 115.3 C CYS 360 C SG CYS 70 1_555 C ZN 503 F ZN ZN 1_555 C HIS 373 C NE2 HIS 83 1_555 107.8 C CYS 355 C SG CYS 65 1_555 C ZN 503 F ZN ZN 1_555 C HIS 377 C NE2 HIS 87 1_555 105.5 C CYS 360 C SG CYS 70 1_555 C ZN 503 F ZN ZN 1_555 C HIS 377 C NE2 HIS 87 1_555 110.9 C HIS 373 C NE2 HIS 83 1_555 C ZN 503 F ZN ZN 1_555 C HIS 377 C NE2 HIS 87 1_555 107.1 C CYS 385 C SG CYS 95 1_555 C ZN 504 G ZN ZN 1_555 C CYS 390 C SG CYS 100 1_555 106.5 C CYS 385 C SG CYS 95 1_555 C ZN 504 G ZN ZN 1_555 C HIS 403 C NE2 HIS 113 1_555 111.8 C CYS 390 C SG CYS 100 1_555 C ZN 504 G ZN ZN 1_555 C HIS 403 C NE2 HIS 113 1_555 113.9 C CYS 385 C SG CYS 95 1_555 C ZN 504 G ZN ZN 1_555 C HIS 407 C NE2 HIS 117 1_555 108.4 C CYS 390 C SG CYS 100 1_555 C ZN 504 G ZN ZN 1_555 C HIS 407 C NE2 HIS 117 1_555 109.1 C HIS 403 C NE2 HIS 113 1_555 C ZN 504 G ZN ZN 1_555 C HIS 407 C NE2 HIS 117 1_555 107.0 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 C O ILE 296 C O ILE 6 C N PHE 307 C N PHE 17 C O HIS 325 C O HIS 35 C N PHE 334 C N PHE 44 C O PHE 353 C O PHE 63 C N PHE 364 C N PHE 74 1 C OG1 THR 295 C OG1 THR 5 1 Y 1 C CG2 THR 295 C CG2 THR 5 1 Y 1 C MET 291 C MET 1 1 Y 1 C GLU 292 C GLU 2 1 Y 1 C PRO 293 C PRO 3 1 Y 1 C ARG 294 C ARG 4 1 Y 1 C LYS 409 C LYS 119 1 Y 1 C ALA 410 C ALA 120 1 Y 1 C LYS 411 C LYS 121 1 Y 1 C ASN 412 C ASN 122 1 Y 1 C ASN 413 C ASN 123 1 Y 1 C GLN 414 C GLN 124 1 Y 1 A DA 1 0.071 SIDE CHAIN 1 B DC 38 0.068 SIDE CHAIN 1 B DT 40 0.069 SIDE CHAIN 1 -3.96 0.40 104.50 100.54 A A A O4' C4' C3' DA DA DA 1 1 1 N 1 2.34 0.30 108.30 110.64 A A A O4' C1' N9 DA DA DA 1 1 1 N 1 4.47 0.30 108.30 112.77 A A A O4' C1' N9 DG DG DG 2 2 2 N 1 4.04 0.30 108.30 112.34 A A A O4' C1' N1 DT DT DT 5 5 5 N 1 -3.90 0.60 122.90 119.00 A A A C6 C5 C7 DT DT DT 5 5 5 N 1 3.31 0.30 108.30 111.61 A A A O4' C1' N1 DC DC DC 6 6 6 N 1 7.87 1.20 119.70 127.57 A A A C3' O3' P DC DC DT 6 6 7 Y 1 -6.12 0.80 105.90 99.78 A A A O4' C1' C2' DT DT DT 7 7 7 N 1 -5.52 0.60 122.90 117.38 A A A C6 C5 C7 DT DT DT 7 7 7 N 1 -7.64 1.00 110.10 102.46 A A A C1' O4' C4' DC DC DC 8 8 8 N 1 3.18 0.30 108.30 111.48 A A A O4' C1' N1 DC DC DC 8 8 8 N 1 3.10 0.30 108.30 111.40 A A A O4' C1' N1 DT DT DT 12 12 12 N 1 -4.24 0.60 122.90 118.66 A A A C6 C5 C7 DT DT DT 12 12 12 N 1 10.05 1.20 119.70 129.75 A A A C3' O3' P DT DT DT 12 12 13 Y 1 4.28 0.30 108.30 112.58 A A A O4' C1' N1 DT DT DT 14 14 14 N 1 2.63 0.30 108.30 110.93 A A A O4' C1' N9 DA DA DA 16 16 16 N 1 -4.03 0.40 104.50 100.47 A A A O4' C4' C3' DA DA DA 17 17 17 N 1 5.11 0.30 108.30 113.41 A A A O4' C1' N9 DG DG DG 18 18 18 N 1 -5.55 0.80 102.40 96.85 A A A C3' C2' C1' DC DC DC 19 19 19 N 1 3.47 0.30 108.30 111.77 A A A O4' C1' N1 DC DC DC 19 19 19 N 1 7.23 0.30 108.30 115.53 B B B O4' C1' N1 DC DC DC 21 21 21 N 1 7.48 0.30 108.30 115.78 B B B O4' C1' N9 DG DG DG 22 22 22 N 1 7.32 0.30 108.30 115.62 B B B O4' C1' N1 DT DT DT 24 24 24 N 1 3.86 0.30 108.30 112.16 B B B O4' C1' N1 DT DT DT 25 25 25 N 1 -4.02 0.60 122.90 118.88 B B B C6 C5 C7 DT DT DT 25 25 25 N 1 -9.14 1.00 110.10 100.96 B B B C1' O4' C4' DC DC DC 26 26 26 N 1 3.92 0.30 108.30 112.22 B B B O4' C1' N9 DA DA DA 27 27 27 N 1 2.01 0.30 108.30 110.31 B B B O4' C1' N9 DA DA DA 28 28 28 N 1 -5.88 0.70 108.00 102.12 B B B O4' C1' N9 DA DA DA 29 29 29 N 1 -6.42 1.00 110.10 103.68 B B B C1' O4' C4' DA DA DA 30 30 30 N 1 -6.28 0.80 105.90 99.62 B B B O4' C1' C2' DT DT DT 31 31 31 N 1 2.08 0.30 108.30 110.38 B B B O4' C1' N1 DT DT DT 31 31 31 N 1 -4.05 0.60 122.90 118.85 B B B C6 C5 C7 DT DT DT 31 31 31 N 1 4.52 0.30 108.30 112.82 B B B O4' C1' N9 DG DG DG 32 32 32 N 1 4.57 0.30 108.30 112.87 B B B O4' C1' N9 DG DG DG 33 33 33 N 1 2.25 0.30 108.30 110.55 B B B O4' C1' N9 DA DA DA 34 34 34 N 1 6.40 0.30 108.30 114.70 B B B O4' C1' N9 DG DG DG 35 35 35 N 1 10.38 1.20 119.70 130.08 B B B C3' O3' P DG DG DA 35 35 36 Y 1 10.01 1.20 119.70 129.71 B B B C3' O3' P DA DA DC 36 36 37 Y 1 3.01 0.30 108.30 111.31 B B B O4' C1' N1 DC DC DC 37 37 37 N 1 -6.26 1.00 110.10 103.84 B B B C1' O4' C4' DC DC DC 38 38 38 N 1 -6.94 0.80 105.90 98.96 B B B O4' C1' C2' DC DC DC 38 38 38 N 1 5.81 0.30 108.30 114.11 B B B O4' C1' N1 DC DC DC 38 38 38 N 1 -2.99 0.40 104.50 101.51 B B B O4' C4' C3' DC DC DC 39 39 39 N 1 9.11 0.30 108.30 117.41 B B B O4' C1' N1 DT DT DT 40 40 40 N 1 -4.31 0.60 122.90 118.59 B B B C6 C5 C7 DT DT DT 40 40 40 N 1 9.53 1.50 119.30 128.83 C C C C N CA LYS PRO PRO 351 352 352 Y 1 4.81 0.50 120.30 125.11 C C C NE CZ NH1 ARG ARG ARG 363 363 363 N 1 -4.40 0.50 120.30 115.90 C C C NE CZ NH2 ARG ARG ARG 363 363 363 N 1 A A C5 C7 DT DT 7 7 0.052 0.006 1.496 1.548 N 1 A A C5 C7 DT DT 11 11 0.039 0.006 1.496 1.535 N 1 B B P O5' DG DG 22 22 0.063 0.010 1.593 1.656 N 1 B B C5' C4' DG DG 22 22 0.049 0.007 1.512 1.561 N 1 B B O3' C3' DA DA 29 29 -0.057 0.006 1.419 1.362 N 1 B B O3' P DA DA 29 30 -0.077 0.012 1.607 1.530 Y 1 B B C6 N1 DA DA 30 30 -0.048 0.007 1.351 1.303 N 1 B B C5 C7 DT DT 31 31 0.042 0.006 1.496 1.538 N 1 B B C5' C4' DC DC 38 38 0.055 0.007 1.512 1.567 N 1 C PRO 299 -48.32 -72.05 1 C HIS 300 -8.92 111.16 1 C LYS 301 -16.55 -84.45 1 C CYS 360 -86.33 -90.35 1 C ASP 380 -59.04 91.66 1 C TYR 383 -112.72 77.94 1 C ASP 388 -53.71 108.00 LOCAL SCALING OF F(OBSERVED) AGAINST F(CALCULATED) WITH LSCALE (AUTHOR: M. ROULD) TO CORRECT FOR ANISOTROPIC DIFFRACTION AND ABSORPTION EFFECTS 0.3300000 0.2120000 0.2120000 2.500 6.000 9726 1 2.000 2.500 6.000 87 1809 4 814 904 0.016 2.07 1.500 2.000 2.000 2.500 1UBD 12347 3.000 0.0800000 1 5.000 93.600 refinement X-PLOR 3.1 data reduction DENZO data scaling SCALEPACK CO-CRYSTAL STRUCTURE OF HUMAN YY1 ZINC FINGER DOMAIN BOUND TO THE ADENO-ASSOCIATED VIRUS P5 INITIATOR ELEMENT 1 N N 2 N N 3 N N 4 N N 4 N N 4 N N 4 N N 5 N N 5 N N 5 N N C ASN 310 C ASN 20 HELX_P C HIS 320 C HIS 30 1 1 11 C SER 337 C SER 47 HELX_P C VAL 346 C VAL 56 1 2 10 C ASP 367 C ASP 77 HELX_P C THR 378 C THR 88 1 3 12 C LYS 401 C LYS 111 HELX_P C THR 406 C THR 116 1 4 6 metalc 2.332 C CYS 298 C SG CYS 8 1_555 C ZN 501 D ZN ZN 1_555 metalc 2.322 C CYS 303 C SG CYS 13 1_555 C ZN 501 D ZN ZN 1_555 metalc 1.997 C HIS 316 C NE2 HIS 26 1_555 C ZN 501 D ZN ZN 1_555 metalc 2.008 C HIS 320 C NE2 HIS 30 1_555 C ZN 501 D ZN ZN 1_555 metalc 2.278 C CYS 327 C SG CYS 37 1_555 C ZN 502 E ZN ZN 1_555 metalc 2.307 C CYS 330 C SG CYS 40 1_555 C ZN 502 E ZN ZN 1_555 metalc 2.041 C HIS 343 C NE2 HIS 53 1_555 C ZN 502 E ZN ZN 1_555 metalc 2.007 C HIS 347 C NE2 HIS 57 1_555 C ZN 502 E ZN ZN 1_555 metalc 2.288 C CYS 355 C SG CYS 65 1_555 C ZN 503 F ZN ZN 1_555 metalc 2.286 C CYS 360 C SG CYS 70 1_555 C ZN 503 F ZN ZN 1_555 metalc 2.001 C HIS 373 C NE2 HIS 83 1_555 C ZN 503 F ZN ZN 1_555 metalc 1.998 C HIS 377 C NE2 HIS 87 1_555 C ZN 503 F ZN ZN 1_555 metalc 2.321 C CYS 385 C SG CYS 95 1_555 C ZN 504 G ZN ZN 1_555 metalc 2.361 C CYS 390 C SG CYS 100 1_555 C ZN 504 G ZN ZN 1_555 metalc 2.009 C HIS 403 C NE2 HIS 113 1_555 C ZN 504 G ZN ZN 1_555 metalc 2.018 C HIS 407 C NE2 HIS 117 1_555 C ZN 504 G ZN ZN 1_555 hydrog WATSON-CRICK A DA 1 A N1 DA 1 1_555 B DT 40 B N3 DT 20 1_555 hydrog WATSON-CRICK A DA 1 A N6 DA 1 1_555 B DT 40 B O4 DT 20 1_555 hydrog WATSON-CRICK A DG 2 A N1 DG 2 1_555 B DC 39 B N3 DC 19 1_555 hydrog WATSON-CRICK A DG 2 A N2 DG 2 1_555 B DC 39 B O2 DC 19 1_555 hydrog WATSON-CRICK A DG 2 A O6 DG 2 1_555 B DC 39 B N4 DC 19 1_555 hydrog WATSON-CRICK A DG 3 A N1 DG 3 1_555 B DC 38 B N3 DC 18 1_555 hydrog WATSON-CRICK A DG 3 A N2 DG 3 1_555 B DC 38 B O2 DC 18 1_555 hydrog WATSON-CRICK A DG 3 A O6 DG 3 1_555 B DC 38 B N4 DC 18 1_555 hydrog WATSON-CRICK A DG 4 A N1 DG 4 1_555 B DC 37 B N3 DC 17 1_555 hydrog WATSON-CRICK A DG 4 A N2 DG 4 1_555 B DC 37 B O2 DC 17 1_555 hydrog WATSON-CRICK A DG 4 A O6 DG 4 1_555 B DC 37 B N4 DC 17 1_555 hydrog WATSON-CRICK A DT 5 A N3 DT 5 1_555 B DA 36 B N1 DA 16 1_555 hydrog WATSON-CRICK A DT 5 A O4 DT 5 1_555 B DA 36 B N6 DA 16 1_555 hydrog WATSON-CRICK A DC 6 A N3 DC 6 1_555 B DG 35 B N1 DG 15 1_555 hydrog WATSON-CRICK A DC 6 A N4 DC 6 1_555 B DG 35 B O6 DG 15 1_555 hydrog WATSON-CRICK A DC 6 A O2 DC 6 1_555 B DG 35 B N2 DG 15 1_555 hydrog WATSON-CRICK A DT 7 A N3 DT 7 1_555 B DA 34 B N1 DA 14 1_555 hydrog WATSON-CRICK A DT 7 A O4 DT 7 1_555 B DA 34 B N6 DA 14 1_555 hydrog WATSON-CRICK A DC 8 A N3 DC 8 1_555 B DG 33 B N1 DG 13 1_555 hydrog WATSON-CRICK A DC 8 A N4 DC 8 1_555 B DG 33 B O6 DG 13 1_555 hydrog WATSON-CRICK A DC 8 A O2 DC 8 1_555 B DG 33 B N2 DG 13 1_555 hydrog WATSON-CRICK A DC 9 A N3 DC 9 1_555 B DG 32 B N1 DG 12 1_555 hydrog WATSON-CRICK A DC 9 A N4 DC 9 1_555 B DG 32 B O6 DG 12 1_555 hydrog WATSON-CRICK A DC 9 A O2 DC 9 1_555 B DG 32 B N2 DG 12 1_555 hydrog WATSON-CRICK A DA 10 A N1 DA 10 1_555 B DT 31 B N3 DT 11 1_555 hydrog WATSON-CRICK A DA 10 A N6 DA 10 1_555 B DT 31 B O4 DT 11 1_555 hydrog WATSON-CRICK A DT 11 A N3 DT 11 1_555 B DA 30 B N1 DA 10 1_555 hydrog WATSON-CRICK A DT 11 A O4 DT 11 1_555 B DA 30 B N6 DA 10 1_555 hydrog WATSON-CRICK A DT 12 A N3 DT 12 1_555 B DA 29 B N1 DA 9 1_555 hydrog WATSON-CRICK A DT 12 A O4 DT 12 1_555 B DA 29 B N6 DA 9 1_555 hydrog WATSON-CRICK A DT 13 A N3 DT 13 1_555 B DA 28 B N1 DA 8 1_555 hydrog WATSON-CRICK A DT 13 A O4 DT 13 1_555 B DA 28 B N6 DA 8 1_555 hydrog WATSON-CRICK A DT 14 A N3 DT 14 1_555 B DA 27 B N1 DA 7 1_555 hydrog WATSON-CRICK A DT 14 A O4 DT 14 1_555 B DA 27 B N6 DA 7 1_555 hydrog WATSON-CRICK A DG 15 A N1 DG 15 1_555 B DC 26 B N3 DC 6 1_555 hydrog WATSON-CRICK A DG 15 A N2 DG 15 1_555 B DC 26 B O2 DC 6 1_555 hydrog WATSON-CRICK A DG 15 A O6 DG 15 1_555 B DC 26 B N4 DC 6 1_555 hydrog WATSON-CRICK A DA 16 A N1 DA 16 1_555 B DT 25 B N3 DT 5 1_555 hydrog WATSON-CRICK A DA 16 A N6 DA 16 1_555 B DT 25 B O4 DT 5 1_555 hydrog WATSON-CRICK A DA 17 A N1 DA 17 1_555 B DT 24 B N3 DT 4 1_555 hydrog WATSON-CRICK A DA 17 A N6 DA 17 1_555 B DT 24 B O4 DT 4 1_555 hydrog WATSON-CRICK A DG 18 A N1 DG 18 1_555 B DC 23 B N3 DC 3 1_555 hydrog WATSON-CRICK A DG 18 A N2 DG 18 1_555 B DC 23 B O2 DC 3 1_555 hydrog WATSON-CRICK A DG 18 A O6 DG 18 1_555 B DC 23 B N4 DC 3 1_555 hydrog WATSON-CRICK A DC 19 A N3 DC 19 1_555 B DG 22 B N1 DG 2 1_555 hydrog WATSON-CRICK A DC 19 A N4 DC 19 1_555 B DG 22 B O6 DG 2 1_555 hydrog WATSON-CRICK A DC 19 A O2 DC 19 1_555 B DG 22 B N2 DG 2 1_555 hydrog DG-DC PAIR A DG 20 A N1 DG 20 1_555 B DC 21 B N3 DC 1 1_555 TRANSCRIPTION/DNA TRANSCRIPTION INITIATION, INITIATOR ELEMENT, YY1, ZINC FINGER PROTEIN, DNA- PROTEIN RECOGNITION, COMPLEX (TRANSCRIPTION REGULATION-DNA), TRANSCRIPTION-DNA COMPLEX TYY1_HUMAN UNP 3 293 P25490 1UBD PDB 1 1UBD 1UBD PDB 2 1UBD 293 414 1UBD 291 414 P25490 C 1 1 124 1 20 1UBD 1 20 1UBD A 2 1 20 21 40 1UBD 21 40 1UBD B 3 1 20 1 ASP engineered mutation MET 291 1UBD C P25490 UNP 291 1 1 ALA engineered mutation GLU 292 1UBD C P25490 UNP 292 2 2 2 2 anti-parallel anti-parallel anti-parallel C ILE 296 C ILE 6 C ALA 297 C ALA 7 C MET 306 C MET 16 C PHE 307 C PHE 17 C HIS 325 C HIS 35 C VAL 326 C VAL 36 C ALA 333 C ALA 43 C PHE 334 C PHE 44 C PHE 353 C PHE 63 C GLN 354 C GLN 64 C ARG 363 C ARG 73 C PHE 364 C PHE 74 BINDING SITE FOR RESIDUE ZN C 501 C ZN 501 Software 4 BINDING SITE FOR RESIDUE ZN C 502 C ZN 502 Software 4 BINDING SITE FOR RESIDUE ZN C 503 C ZN 503 Software 4 BINDING SITE FOR RESIDUE ZN C 504 C ZN 504 Software 4 C CYS 298 C CYS 8 4 1_555 C CYS 303 C CYS 13 4 1_555 C HIS 316 C HIS 26 4 1_555 C HIS 320 C HIS 30 4 1_555 C CYS 327 C CYS 37 4 1_555 C CYS 330 C CYS 40 4 1_555 C HIS 343 C HIS 53 4 1_555 C HIS 347 C HIS 57 4 1_555 C CYS 355 C CYS 65 4 1_555 C CYS 360 C CYS 70 4 1_555 C HIS 373 C HIS 83 4 1_555 C HIS 377 C HIS 87 4 1_555 C CYS 385 C CYS 95 4 1_555 C CYS 390 C CYS 100 4 1_555 C HIS 403 C HIS 113 4 1_555 C HIS 407 C HIS 117 4 1_555 19 P 21 21 21