1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Ohashi, W.
Hirota, H.
Yamazaki, T.
Muto, Y.
Yokoyama, S.
RIKEN Structural Genomics/Proteomics Initiative (RSGI)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
N
N
159
S
C
N
160
N
C
N
161
N
O
N
162
S
C
N
163
N
C
N
164
N
C
N
165
N
C
N
166
N
O
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
N
N
181
S
C
N
182
N
C
N
183
N
O
N
184
N
C
N
185
N
C
N
186
N
C
N
187
N
C
N
188
N
O
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
N
N
203
S
C
N
204
N
C
N
205
N
O
N
206
N
C
N
207
N
C
N
208
N
C
N
209
N
C
N
210
N
N
N
211
N
O
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
N
N
228
S
C
N
229
N
C
N
230
N
O
N
231
N
C
N
232
N
C
N
233
N
S
N
234
N
C
N
235
N
O
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
N
N
248
S
C
N
249
N
C
N
250
N
O
N
251
N
C
Y
252
N
C
Y
253
N
C
Y
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
N
258
N
O
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
N
N
271
S
C
N
272
N
C
N
273
N
O
N
274
N
C
N
275
N
C
N
276
N
C
N
277
N
O
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
N
C
N
292
N
O
N
293
N
O
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
N
N
302
S
C
N
303
N
C
N
304
N
O
N
305
R
C
N
306
N
O
N
307
N
C
N
308
N
O
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
N
C
Y
323
N
C
Y
324
N
C
Y
325
N
C
Y
326
N
N
Y
327
N
C
Y
328
N
C
Y
329
N
C
Y
330
N
C
Y
331
N
C
N
332
N
O
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
N
N
346
S
C
N
347
N
C
N
348
N
O
N
349
N
C
Y
350
N
C
Y
351
N
C
Y
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
N
356
N
O
N
357
N
O
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
N
N
370
S
C
N
371
N
C
N
372
N
O
N
373
N
C
N
374
N
C
N
375
N
C
N
376
N
O
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
doub
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
doub
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
doub
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
doub
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
Y
246
N
doub
Y
247
N
sing
Y
248
N
sing
N
249
N
sing
Y
250
N
doub
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
doub
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
doub
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
doub
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
doub
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
Y
315
N
doub
Y
316
N
sing
Y
317
N
sing
N
318
N
sing
Y
319
N
doub
Y
320
N
sing
Y
321
N
sing
N
322
N
sing
Y
323
N
sing
Y
324
N
doub
N
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
doub
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
Y
343
N
doub
Y
344
N
sing
Y
345
N
sing
N
346
N
sing
Y
347
N
doub
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
doub
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
To be published
0353
Solution Structure of RSGI RUH-003, a PDZ domain of hypothetical KIAA0559 protein from human cDNA
10.2210/pdb1ujd/pdb
pdb_00001ujd
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
1
1.0
12279.770
KIAA0559 protein
PDZ domain
1
man
polymer
no
no
GSSGSSGHYIFPHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGI
PLTSKTYEEVQSIISQQSGEAEICVRLDLNMSGPSSG
GSSGSSGHYIFPHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGI
PLTSKTYEEVQSIISQQSGEAEICVRLDLNMSGPSSG
A
hsk002000544.1
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
sample
Cell-free protein synthesis
9606
Homo sapiens
RIKEN Structural Genomics/Proteomics Initiative
RSGI
database_2
pdbx_nmr_software
pdbx_nmr_spectrometer
pdbx_struct_assembly
pdbx_struct_oper_list
struct_ref_seq_dif
chem_comp_atom
chem_comp_bond
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Data collection
1
0
2004-01-31
1
1
2008-04-27
1
2
2011-07-13
1
3
2022-03-02
1
4
2023-12-27
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
_pdbx_nmr_spectrometer.model
_struct_ref_seq_dif.details
Y
PDBJ
Y
PDBJ
2003-07-31
REL
REL
The structure was determined using triple-resonance NMR spectroscopy
The submitted conformer models are those with the lowest number of target function
100
20
3D_13C-separated_NOESY
3D_15N-separated_NOESY
100mM NaCl
7.0
ambient
298
K
simulated annealing, torsion angle dynamics
1
lowest target function
1.5mM RSGI RUH-003 U-13C,15N; 20mM Tris-HCl, 100mM NaCl, 1mM DTT U-2H, 0.02% NaN3; 90% H2O, 10% D2O
90% H2O/10% D2O
Bruker
collection
XwinNMR
3.1
Delaglio
processing
NMRPipe
2.1
Johnson
data analysis
NMRView
5.0.4
Guentert
structure solution
CYANA
1.0.7
Guentert
refinement
CYANA
1.0.7
800
Bruker
AVANCE
GLY
1
n
1
GLY
1
A
SER
2
n
2
SER
2
A
SER
3
n
3
SER
3
A
GLY
4
n
4
GLY
4
A
SER
5
n
5
SER
5
A
SER
6
n
6
SER
6
A
GLY
7
n
7
GLY
7
A
HIS
8
n
8
HIS
8
A
TYR
9
n
9
TYR
9
A
ILE
10
n
10
ILE
10
A
PHE
11
n
11
PHE
11
A
PRO
12
n
12
PRO
12
A
HIS
13
n
13
HIS
13
A
ALA
14
n
14
ALA
14
A
ARG
15
n
15
ARG
15
A
ILE
16
n
16
ILE
16
A
LYS
17
n
17
LYS
17
A
ILE
18
n
18
ILE
18
A
THR
19
n
19
THR
19
A
ARG
20
n
20
ARG
20
A
ASP
21
n
21
ASP
21
A
SER
22
n
22
SER
22
A
LYS
23
n
23
LYS
23
A
ASP
24
n
24
ASP
24
A
HIS
25
n
25
HIS
25
A
THR
26
n
26
THR
26
A
VAL
27
n
27
VAL
27
A
SER
28
n
28
SER
28
A
GLY
29
n
29
GLY
29
A
ASN
30
n
30
ASN
30
A
GLY
31
n
31
GLY
31
A
LEU
32
n
32
LEU
32
A
GLY
33
n
33
GLY
33
A
ILE
34
n
34
ILE
34
A
ARG
35
n
35
ARG
35
A
ILE
36
n
36
ILE
36
A
VAL
37
n
37
VAL
37
A
GLY
38
n
38
GLY
38
A
GLY
39
n
39
GLY
39
A
LYS
40
n
40
LYS
40
A
GLU
41
n
41
GLU
41
A
ILE
42
n
42
ILE
42
A
PRO
43
n
43
PRO
43
A
GLY
44
n
44
GLY
44
A
HIS
45
n
45
HIS
45
A
SER
46
n
46
SER
46
A
GLY
47
n
47
GLY
47
A
GLU
48
n
48
GLU
48
A
ILE
49
n
49
ILE
49
A
GLY
50
n
50
GLY
50
A
ALA
51
n
51
ALA
51
A
TYR
52
n
52
TYR
52
A
ILE
53
n
53
ILE
53
A
ALA
54
n
54
ALA
54
A
LYS
55
n
55
LYS
55
A
ILE
56
n
56
ILE
56
A
LEU
57
n
57
LEU
57
A
PRO
58
n
58
PRO
58
A
GLY
59
n
59
GLY
59
A
GLY
60
n
60
GLY
60
A
SER
61
n
61
SER
61
A
ALA
62
n
62
ALA
62
A
GLU
63
n
63
GLU
63
A
GLN
64
n
64
GLN
64
A
THR
65
n
65
THR
65
A
GLY
66
n
66
GLY
66
A
LYS
67
n
67
LYS
67
A
LEU
68
n
68
LEU
68
A
MET
69
n
69
MET
69
A
GLU
70
n
70
GLU
70
A
GLY
71
n
71
GLY
71
A
MET
72
n
72
MET
72
A
GLN
73
n
73
GLN
73
A
VAL
74
n
74
VAL
74
A
LEU
75
n
75
LEU
75
A
GLU
76
n
76
GLU
76
A
TRP
77
n
77
TRP
77
A
ASN
78
n
78
ASN
78
A
GLY
79
n
79
GLY
79
A
ILE
80
n
80
ILE
80
A
PRO
81
n
81
PRO
81
A
LEU
82
n
82
LEU
82
A
THR
83
n
83
THR
83
A
SER
84
n
84
SER
84
A
LYS
85
n
85
LYS
85
A
THR
86
n
86
THR
86
A
TYR
87
n
87
TYR
87
A
GLU
88
n
88
GLU
88
A
GLU
89
n
89
GLU
89
A
VAL
90
n
90
VAL
90
A
GLN
91
n
91
GLN
91
A
SER
92
n
92
SER
92
A
ILE
93
n
93
ILE
93
A
ILE
94
n
94
ILE
94
A
SER
95
n
95
SER
95
A
GLN
96
n
96
GLN
96
A
GLN
97
n
97
GLN
97
A
SER
98
n
98
SER
98
A
GLY
99
n
99
GLY
99
A
GLU
100
n
100
GLU
100
A
ALA
101
n
101
ALA
101
A
GLU
102
n
102
GLU
102
A
ILE
103
n
103
ILE
103
A
CYS
104
n
104
CYS
104
A
VAL
105
n
105
VAL
105
A
ARG
106
n
106
ARG
106
A
LEU
107
n
107
LEU
107
A
ASP
108
n
108
ASP
108
A
LEU
109
n
109
LEU
109
A
ASN
110
n
110
ASN
110
A
MET
111
n
111
MET
111
A
SER
112
n
112
SER
112
A
GLY
113
n
113
GLY
113
A
PRO
114
n
114
PRO
114
A
SER
115
n
115
SER
115
A
SER
116
n
116
SER
116
A
GLY
117
n
117
GLY
117
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
18
A
N
ILE
18
A
O
ALA
101
A
O
ALA
101
A
O
CYS
104
A
O
CYS
104
A
N
GLU
76
A
N
GLU
76
A
O
VAL
74
A
O
VAL
74
A
N
ALA
51
A
N
ALA
51
A
O
TYR
52
A
O
TYR
52
A
N
VAL
37
A
N
VAL
37
A
N
ILE
18
A
N
ILE
18
A
O
ALA
101
A
O
ALA
101
A
O
CYS
104
A
O
CYS
104
A
N
GLU
76
A
N
GLU
76
A
N
TRP
77
A
N
TRP
77
A
O
ILE
80
A
O
ILE
80
1
A
A
O
H
GLN
SER
91
95
1.48
2
A
A
O
H
ARG
ALA
35
54
1.52
2
A
A
O
H
GLU
SER
88
92
1.53
3
A
A
O
H
GLN
SER
91
95
1.48
3
A
A
H
O
TRP
ILE
77
80
1.50
3
A
A
O
H
ILE
GLY
53
71
1.57
3
A
A
H
O
ILE
ALA
18
101
1.58
4
A
A
H
O
ASN
GLU
78
102
1.52
4
A
A
O
H
GLN
SER
91
95
1.54
5
A
A
O
HG1
ALA
THR
62
65
1.44
5
A
A
O
H
GLN
SER
91
95
1.55
6
A
A
O
H
GLN
SER
91
95
1.52
6
A
A
O
H
GLY
MET
71
111
1.58
6
A
A
H
O
ASN
GLU
78
102
1.59
6
A
A
H
O
LEU
CYS
75
104
1.60
7
A
A
O
H
GLN
SER
91
95
1.53
7
A
A
O
HG1
ALA
THR
62
65
1.59
7
A
A
HH11
O
ARG
ASP
106
108
1.60
8
A
A
O
H
GLN
SER
91
95
1.50
9
A
A
O
H
GLU
SER
88
92
1.54
9
A
A
O
H
GLN
SER
91
95
1.58
10
A
A
O
HG
GLN
SER
91
95
1.57
10
A
A
O
H
ILE
SER
49
84
1.57
10
A
A
O
H
ARG
ALA
35
54
1.60
11
A
A
H
O
ASN
GLU
78
102
1.50
11
A
A
O
H
ARG
ALA
35
54
1.52
12
A
A
O
H
GLY
MET
71
111
1.52
12
A
A
O
H
ARG
ALA
35
54
1.52
12
A
A
O
H
GLN
SER
91
95
1.54
13
A
A
O
H
GLN
SER
91
95
1.54
14
A
A
O
H
GLN
SER
91
95
1.47
14
A
A
H
O
ASN
GLU
78
102
1.60
15
A
A
H
O
ASN
GLU
78
102
1.58
16
A
A
O
H
GLN
SER
91
95
1.46
16
A
A
O
H
GLY
MET
71
111
1.55
16
A
A
H
O
ASN
GLU
78
102
1.55
16
A
A
H
O
LEU
CYS
75
104
1.60
17
A
A
O
H
GLN
SER
91
95
1.51
18
A
A
O
H
GLN
SER
91
95
1.49
18
A
A
H
O
ILE
ALA
18
101
1.57
19
A
A
H
O
ILE
ALA
18
101
1.52
19
A
A
O
H
GLU
SER
88
92
1.54
19
A
A
O
H
GLN
SER
91
95
1.55
20
A
A
O
H
GLN
SER
91
95
1.51
20
A
A
O
H
ARG
ALA
35
54
1.51
1
A
SER
2
-164.65
-57.96
1
A
SER
6
61.80
133.52
1
A
LYS
23
67.45
146.87
1
A
ASP
24
-172.64
-61.02
1
A
HIS
25
-175.47
64.38
1
A
VAL
27
-155.21
56.40
1
A
SER
28
-150.04
-57.72
1
A
LEU
32
66.78
151.31
1
A
HIS
45
-45.89
151.23
1
A
SER
84
71.37
42.31
1
A
LYS
85
-132.02
-156.77
1
A
SER
95
-66.97
71.12
1
A
GLN
96
-179.05
70.40
1
A
GLN
97
-169.60
109.51
1
A
GLU
100
-39.04
157.12
1
A
LEU
107
-73.07
-80.73
1
A
ASP
108
-69.36
94.80
1
A
LEU
109
-177.77
136.77
1
A
SER
112
61.26
88.52
2
A
SER
3
67.64
93.89
2
A
SER
5
-176.11
112.80
2
A
TYR
9
-60.11
-179.98
2
A
SER
22
68.06
-69.51
2
A
LYS
23
168.82
78.11
2
A
ASP
24
174.02
137.60
2
A
HIS
25
168.16
156.11
2
A
VAL
27
62.15
122.07
2
A
SER
28
63.61
125.89
2
A
LEU
32
68.11
-69.47
2
A
HIS
45
-44.76
167.53
2
A
LEU
57
-40.61
157.43
2
A
SER
84
81.13
32.23
2
A
GLU
89
-39.96
-71.12
2
A
GLU
100
-40.60
160.23
2
A
LEU
109
-177.13
124.85
2
A
MET
111
-106.31
-64.83
2
A
SER
112
67.64
128.18
3
A
SER
2
-177.44
-57.31
3
A
ASP
21
48.82
80.06
3
A
SER
22
-175.56
-49.24
3
A
LYS
23
56.23
96.66
3
A
ASP
24
-55.64
-70.38
3
A
HIS
25
-167.17
-67.42
3
A
THR
26
-159.32
-91.36
3
A
PRO
43
-74.95
-72.40
3
A
SER
46
-64.13
85.63
3
A
LEU
57
-41.19
150.10
3
A
SER
84
80.49
35.29
3
A
GLU
88
-50.86
-70.47
3
A
SER
95
-38.55
-76.09
3
A
GLN
96
-48.18
109.01
3
A
GLN
97
-160.67
-79.60
3
A
SER
98
68.86
67.05
3
A
GLU
100
-41.85
156.76
3
A
LEU
107
-71.68
-99.03
3
A
ASP
108
-43.67
166.11
3
A
LEU
109
69.10
159.10
3
A
ASN
110
-172.89
137.22
3
A
MET
111
-67.46
94.67
3
A
SER
112
61.02
-176.22
3
A
SER
115
67.11
118.15
3
A
SER
116
-138.13
-59.01
4
A
SER
2
69.22
-80.45
4
A
SER
5
65.11
138.24
4
A
SER
6
-132.03
-56.17
4
A
ASP
21
-173.30
120.04
4
A
SER
22
-172.67
123.22
4
A
ASP
24
-178.32
104.80
4
A
SER
28
76.57
-59.09
4
A
ASN
30
-166.05
108.06
4
A
HIS
45
-163.05
38.81
4
A
SER
84
84.25
33.86
4
A
LYS
85
-123.14
-162.27
4
A
GLN
96
55.16
102.12
4
A
SER
98
-118.33
73.57
4
A
GLU
100
-53.33
-179.33
4
A
ALA
101
-174.73
149.35
4
A
LEU
107
-81.60
-85.25
5
A
SER
2
42.82
91.59
5
A
SER
3
-151.85
78.81
5
A
ASP
21
-178.89
122.90
5
A
SER
22
178.87
86.77
5
A
LYS
23
41.18
76.51
5
A
ASP
24
59.38
157.25
5
A
SER
28
62.68
172.59
5
A
ASN
30
-120.21
-54.29
5
A
LEU
57
-40.22
152.69
5
A
LYS
85
-122.40
-157.94
5
A
SER
95
-54.40
-169.10
5
A
GLN
96
78.42
-60.95
5
A
GLU
100
-49.55
152.55
5
A
SER
112
-157.22
-64.67
5
A
SER
115
-179.11
138.30
6
A
HIS
8
-158.11
-58.18
6
A
ASP
21
-173.27
107.80
6
A
SER
22
-172.53
-53.90
6
A
HIS
25
-159.72
-75.90
6
A
VAL
27
-47.18
151.99
6
A
SER
28
-172.82
87.14
6
A
ASN
30
57.11
95.72
6
A
LEU
32
-128.72
-79.50
6
A
LEU
57
-39.93
145.11
6
A
SER
95
-38.77
137.57
6
A
GLN
96
74.22
94.03
6
A
ASP
108
-41.07
-72.50
6
A
SER
112
-100.33
77.83
6
A
PRO
114
-75.01
-169.87
6
A
SER
116
62.34
129.90
7
A
SER
2
-169.69
86.51
7
A
SER
3
-167.02
117.40
7
A
SER
6
59.33
108.73
7
A
SER
22
179.04
85.34
7
A
LYS
23
60.63
103.40
7
A
ASP
24
61.01
160.16
7
A
LEU
57
-40.50
152.68
7
A
SER
84
76.55
42.58
7
A
LYS
85
-126.95
-156.77
7
A
GLN
96
70.57
70.95
7
A
GLN
97
-173.45
76.81
7
A
GLU
100
68.24
148.95
7
A
LEU
107
-67.72
-96.02
7
A
ASP
108
-48.46
175.39
7
A
LEU
109
59.48
156.47
7
A
SER
112
-167.49
-66.54
7
A
SER
115
-47.86
104.51
8
A
SER
5
70.40
112.86
8
A
TYR
9
-56.84
177.07
8
A
ALA
14
-174.49
125.81
8
A
SER
22
163.48
-84.98
8
A
ASP
24
49.37
86.13
8
A
HIS
25
72.72
-87.49
8
A
ASN
30
57.67
91.43
8
A
HIS
45
-170.22
43.02
8
A
LEU
57
-40.96
151.05
8
A
LYS
85
-121.03
-164.35
8
A
GLN
97
-179.08
148.54
8
A
SER
98
-166.84
80.40
8
A
GLU
100
60.27
145.34
8
A
LEU
107
-40.48
-71.70
8
A
ASP
108
-71.35
-169.48
8
A
LEU
109
65.07
-83.86
8
A
ASN
110
61.59
143.28
8
A
SER
112
63.25
108.67
9
A
SER
3
66.37
-82.38
9
A
HIS
8
-106.23
-78.47
9
A
SER
22
50.28
74.78
9
A
LYS
23
-64.65
90.24
9
A
SER
28
-39.64
110.26
9
A
LEU
32
71.18
-62.93
9
A
LYS
85
-114.48
-154.65
9
A
GLU
89
-38.51
-71.89
9
A
GLN
96
66.01
-160.53
9
A
GLN
97
75.50
43.32
9
A
SER
98
57.16
-171.96
9
A
GLU
100
-44.87
164.13
9
A
LEU
107
-75.40
-77.44
9
A
LEU
109
-179.59
124.62
9
A
SER
116
-165.38
114.07
10
A
ASP
21
-49.16
170.71
10
A
SER
22
-49.26
101.37
10
A
ASP
24
-47.27
151.26
10
A
VAL
27
69.64
-69.62
10
A
SER
28
66.20
-72.82
10
A
ASN
30
-171.61
-46.89
10
A
LEU
32
-47.54
-71.24
10
A
SER
46
-106.84
54.11
10
A
GLU
48
-137.59
-153.42
10
A
ILE
49
-176.77
128.63
10
A
LEU
57
-38.25
142.62
10
A
GLU
88
-54.12
-72.22
10
A
SER
95
-40.92
158.06
10
A
GLN
96
72.72
66.24
10
A
GLU
100
-61.44
-175.56
10
A
ALA
101
-174.35
122.78
10
A
LEU
109
63.89
137.55
11
A
SER
6
59.56
92.05
11
A
ASP
21
-114.76
-83.36
11
A
SER
22
56.12
91.05
11
A
LYS
23
71.03
-73.52
11
A
SER
28
-152.83
-62.57
11
A
ASN
30
-158.44
-51.60
11
A
SER
46
67.27
-79.57
11
A
LEU
57
-40.50
153.26
11
A
ASN
78
43.82
28.71
11
A
LYS
85
-114.54
-153.94
11
A
SER
95
-60.56
83.28
11
A
GLN
96
-177.19
-47.58
11
A
GLN
97
-57.17
172.79
11
A
LEU
109
71.87
172.64
11
A
ASN
110
174.28
119.16
12
A
SER
2
-176.50
115.19
12
A
SER
3
63.91
159.99
12
A
SER
6
62.83
150.23
12
A
LYS
23
-141.85
-54.98
12
A
ASP
24
69.92
-64.75
12
A
HIS
25
-56.97
173.24
12
A
THR
26
63.53
138.95
12
A
LEU
32
71.87
145.58
12
A
LEU
57
-39.71
139.12
12
A
LYS
85
-123.93
-158.64
12
A
GLU
88
-50.81
-71.12
12
A
SER
95
-65.04
92.51
12
A
GLN
96
175.79
-55.13
12
A
GLN
97
-52.49
176.70
12
A
GLU
100
-39.42
135.75
12
A
LEU
109
70.55
127.14
12
A
SER
112
-100.77
-65.74
12
A
SER
116
70.69
-59.85
13
A
SER
5
-164.43
114.46
13
A
SER
6
54.18
82.53
13
A
HIS
8
-121.61
-60.04
13
A
ARG
20
-97.92
-65.35
13
A
ASP
21
66.34
97.05
13
A
THR
26
-124.44
-57.50
13
A
SER
28
57.01
102.03
13
A
HIS
45
-43.90
164.83
13
A
LEU
57
-42.02
163.09
13
A
GLN
73
-59.73
108.87
13
A
GLU
89
-38.39
-72.69
13
A
SER
95
-49.37
171.91
13
A
GLN
96
74.24
-58.95
13
A
GLN
97
-61.30
81.66
13
A
GLU
100
-52.03
170.41
13
A
LEU
109
87.36
137.93
14
A
SER
2
-154.99
-46.34
14
A
SER
3
62.34
-87.49
14
A
SER
5
-156.25
-66.67
14
A
SER
22
-108.52
79.27
14
A
THR
26
-131.86
-49.75
14
A
SER
28
69.17
-69.66
14
A
ASN
30
-48.10
156.06
14
A
LEU
32
-55.48
90.11
14
A
HIS
45
-161.95
47.01
14
A
SER
84
84.98
31.54
14
A
TYR
87
-38.09
-36.58
14
A
SER
95
-68.49
63.84
14
A
GLN
96
-179.41
77.54
14
A
SER
98
-113.08
68.00
14
A
GLU
100
74.73
149.06
14
A
LEU
109
-176.95
147.72
14
A
SER
116
-121.56
-59.89
15
A
SER
2
178.85
139.14
15
A
THR
26
42.41
-162.97
15
A
ASN
30
58.57
94.60
15
A
LEU
32
70.02
-69.06
15
A
LEU
57
-40.40
150.87
15
A
LYS
85
-112.94
-160.68
15
A
SER
95
38.84
62.62
15
A
GLN
96
28.48
63.86
15
A
ASP
108
-66.39
-176.71
15
A
LEU
109
71.35
-79.54
15
A
ASN
110
43.75
91.69
15
A
SER
112
50.93
99.54
15
A
SER
115
-155.49
-58.66
16
A
SER
2
-150.70
-58.62
16
A
HIS
8
-165.20
-81.51
16
A
ASP
21
53.18
88.32
16
A
ASP
24
55.84
98.59
16
A
HIS
25
-172.51
123.81
16
A
THR
26
-55.59
179.72
16
A
SER
28
-164.95
81.72
16
A
ASN
30
70.40
-63.60
16
A
VAL
37
-73.93
-156.12
16
A
GLU
41
-41.23
151.26
16
A
ILE
53
-55.03
109.47
16
A
LEU
57
-40.18
152.81
16
A
GLU
70
-46.68
157.42
16
A
ASN
78
43.62
28.95
16
A
GLN
96
-178.28
81.12
16
A
GLU
100
-60.47
-176.05
16
A
LEU
109
168.16
158.07
16
A
ASN
110
-174.97
107.69
17
A
SER
2
74.47
-66.77
17
A
LYS
23
59.17
101.40
17
A
ASP
24
52.98
100.30
17
A
HIS
25
-175.86
69.57
17
A
VAL
27
-125.38
-51.81
17
A
ASN
30
-159.88
-46.22
17
A
HIS
45
-39.88
150.71
17
A
LYS
55
-170.98
125.23
17
A
LEU
57
-39.78
153.45
17
A
LYS
85
-125.67
-169.98
17
A
GLU
89
-38.14
-72.27
17
A
SER
98
-173.08
118.71
17
A
GLU
100
44.39
-171.28
17
A
ALA
101
-178.01
143.91
17
A
ASP
108
-53.63
-73.79
17
A
ASN
110
-151.48
89.17
17
A
SER
115
-173.98
140.69
18
A
SER
2
-171.34
144.31
18
A
SER
5
78.75
-57.84
18
A
SER
6
58.23
86.33
18
A
ASP
21
-179.10
-67.39
18
A
SER
22
56.83
106.63
18
A
LYS
23
43.79
86.02
18
A
HIS
25
-158.65
-57.64
18
A
THR
26
-161.10
-48.70
18
A
LEU
32
-42.02
-72.39
18
A
THR
65
-39.75
-36.95
18
A
SER
95
-39.64
153.77
18
A
GLN
96
77.41
-170.32
18
A
GLN
97
71.73
63.97
18
A
GLU
100
89.34
168.76
18
A
ASP
108
-40.58
-80.56
18
A
LEU
109
-57.57
172.25
18
A
ASN
110
-179.54
38.89
18
A
MET
111
37.56
84.99
18
A
SER
112
81.50
-69.94
19
A
SER
2
-171.90
122.55
19
A
SER
5
-176.46
104.88
19
A
ALA
14
-162.61
110.67
19
A
SER
22
-60.33
96.07
19
A
THR
26
63.78
153.21
19
A
SER
28
58.16
-91.49
19
A
LEU
32
57.24
177.13
19
A
SER
46
-107.23
54.28
19
A
GLU
48
-139.37
-152.41
19
A
ILE
49
-171.71
135.00
19
A
GLN
73
-59.77
106.54
19
A
GLU
89
-38.84
-70.22
19
A
SER
95
-69.04
-176.93
19
A
GLN
96
41.13
91.07
19
A
GLU
100
-38.98
145.59
19
A
LEU
109
87.33
119.21
20
A
SER
2
-174.75
143.00
20
A
SER
3
59.30
155.93
20
A
HIS
8
70.83
141.76
20
A
ARG
20
-69.89
95.55
20
A
LYS
23
-139.11
-53.04
20
A
HIS
25
51.50
95.25
20
A
SER
28
70.19
108.76
20
A
ASN
30
165.48
120.72
20
A
HIS
45
-179.86
42.91
20
A
GLU
88
-56.58
-70.58
20
A
SER
95
-49.31
154.82
20
A
GLN
96
69.88
102.05
20
A
VAL
105
-105.34
-169.76
20
A
ASP
108
-42.38
169.85
20
A
LEU
109
77.54
-167.51
20
A
ASN
110
171.94
93.15
20
A
SER
112
49.90
98.11
Solution Structure of RSGI RUH-003, a PDZ domain of hypothetical KIAA0559 protein from human cDNA
1
N
N
A
GLY
60
A
GLY
60
HELX_P
A
GLY
66
A
GLY
66
1
1
7
A
THR
86
A
THR
86
HELX_P
A
SER
95
A
SER
95
1
2
10
STRUCTURAL GENOMICS, UNKNOWN FUNCTION
PDZ domain, structural genomics, human cdna, RIKEN Structural Genomics/Proteomics Initiative, RSGI, UNKNOWN FUNCTION
PCLO_HUMAN
UNP
1
766
Q9Y6V0
HYIFPHARIKITRDSKDHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTY
EEVQSIISQQSGEAEICVRLDLNM
766
869
1UJD
8
111
Q9Y6V0
A
1
8
111
1
cloning artifact
GLY
1
1UJD
A
Q9Y6V0
UNP
1
1
cloning artifact
SER
2
1UJD
A
Q9Y6V0
UNP
2
1
cloning artifact
SER
3
1UJD
A
Q9Y6V0
UNP
3
1
cloning artifact
GLY
4
1UJD
A
Q9Y6V0
UNP
4
1
cloning artifact
SER
5
1UJD
A
Q9Y6V0
UNP
5
1
cloning artifact
SER
6
1UJD
A
Q9Y6V0
UNP
6
1
cloning artifact
GLY
7
1UJD
A
Q9Y6V0
UNP
7
1
cloning artifact
SER
112
1UJD
A
Q9Y6V0
UNP
112
1
cloning artifact
GLY
113
1UJD
A
Q9Y6V0
UNP
113
1
cloning artifact
PRO
114
1UJD
A
Q9Y6V0
UNP
114
1
cloning artifact
SER
115
1UJD
A
Q9Y6V0
UNP
115
1
cloning artifact
SER
116
1UJD
A
Q9Y6V0
UNP
116
1
cloning artifact
GLY
117
1UJD
A
Q9Y6V0
UNP
117
5
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
HIS
13
A
HIS
13
A
ILE
18
A
ILE
18
A
ALA
101
A
ALA
101
A
ARG
106
A
ARG
106
A
GLN
73
A
GLN
73
A
TRP
77
A
TRP
77
A
ILE
49
A
ILE
49
A
ILE
56
A
ILE
56
A
ILE
34
A
ILE
34
A
GLU
41
A
GLU
41
A
HIS
13
A
HIS
13
A
ILE
18
A
ILE
18
A
ALA
101
A
ALA
101
A
ARG
106
A
ARG
106
A
GLN
73
A
GLN
73
A
TRP
77
A
TRP
77
A
ILE
80
A
ILE
80
A
PRO
81
A
PRO
81
1
P 1