0.012741
0.000000
0.000000
0.000000
0.012741
0.000000
0.000000
0.000000
0.012741
0.00000
0.00000
0.00000
Yadav, M.K.
Redman, J.E.
Alvarez-Gutierrez, J.M.
Zhang, Y.
Stout, C.D.
Ghadiri, M.R.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
48
90.00
90.00
90.00
78.486
78.486
78.486
C2 H4 O
44.053
ACETYL GROUP
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Cl -1
35.453
CHLORIDE ION
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Biochemistry
BICHAW
0033
0006-2960
44
9723
10.1021/BI050742A
16008357
Structure-Based Engineering of Internal Cavities in Coiled-Coil Peptides
2005
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
114.0
1
2003-07-15
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
DIMER ASYMMETRIC UNIT OF FOUR HELIX BUNDLE MUTATION LEU9SER
4046.757
GENERAL CONTROL PROTEIN GCN4
YES
2
syn
polymer
35.453
CHLORIDE ION
1
syn
non-polymer
18.015
water
28
nat
water
GCN4 LEUCINE ZIPPER, AMINO ACID BIOSYNTHESIS REGULATORY PROTEIN, PLI
no
yes
(ACE)RMKQIEDKSEEILSKLYHIENELARIKKLLGER
XRMKQIEDKSEEILSKLYHIENELARIKKLLGER
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
1
2.5
50
VAPOR DIFFUSION, HANGING DROP
7.00
HANGING DROP, RESERVOIR: 10%W/V PEG 6K, 2 M NACL, PH 7.0
database_PDB_rev
database_PDB_rev_record
exptl_crystal_grow
pdbx_database_proc
pdbx_database_status
repository
Initial release
Version format compliance
Version format compliance
Data collection
Experimental preparation
Other
1
0
2004-10-13
1
1
2011-05-08
1
2
2011-07-13
1
3
2019-05-08
_exptl_crystal_grow.method
_pdbx_database_status.recvd_author_approval
GCN4 LEUCINE ZIPPER CORE MUTANT P-LI
GCN4 LEUCINE ZIPPER CORE MUTANT P-LI
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
PDBE
Y
PDBE
2003-09-15
REL
CL
CHLORIDE ION
HOH
water
BASED ON SEQUENCE FROM SACCHAROMYCES CEREVISIAE (BAKER'S YEAST)
4932
BAKER'S YEAST
SACCHAROMYCES CEREVISIAE
sample
ENGINEERED RESIDUE VAL 257 SER, CHAINS A AND B
CL
1033
2
CL
CL
1033
A
HOH
2001
3
HOH
HOH
2001
A
HOH
2002
3
HOH
HOH
2002
A
HOH
2003
3
HOH
HOH
2003
A
HOH
2004
3
HOH
HOH
2004
A
HOH
2005
3
HOH
HOH
2005
A
HOH
2006
3
HOH
HOH
2006
A
HOH
2007
3
HOH
HOH
2007
A
HOH
2008
3
HOH
HOH
2008
A
HOH
2009
3
HOH
HOH
2009
A
HOH
2010
3
HOH
HOH
2010
A
HOH
2011
3
HOH
HOH
2011
A
HOH
2012
3
HOH
HOH
2012
A
HOH
2013
3
HOH
HOH
2013
A
HOH
2014
3
HOH
HOH
2014
A
HOH
2015
3
HOH
HOH
2015
A
HOH
2016
3
HOH
HOH
2016
A
HOH
2001
3
HOH
HOH
2001
B
HOH
2002
3
HOH
HOH
2002
B
HOH
2003
3
HOH
HOH
2003
B
HOH
2004
3
HOH
HOH
2004
B
HOH
2005
3
HOH
HOH
2005
B
HOH
2006
3
HOH
HOH
2006
B
HOH
2007
3
HOH
HOH
2007
B
HOH
2008
3
HOH
HOH
2008
B
HOH
2009
3
HOH
HOH
2009
B
HOH
2010
3
HOH
HOH
2010
B
HOH
2011
3
HOH
HOH
2011
B
HOH
2012
3
HOH
HOH
2012
B
n
1
-1
A
n
2
1
A
MET
2
n
3
MET
2
A
LYS
3
n
4
LYS
3
A
GLN
4
n
5
GLN
4
A
ILE
5
n
6
ILE
5
A
GLU
6
n
7
GLU
6
A
ASP
7
n
8
ASP
7
A
LYS
8
n
9
LYS
8
A
SER
9
n
10
SER
9
A
GLU
10
n
11
GLU
10
A
GLU
11
n
12
GLU
11
A
ILE
12
n
13
ILE
12
A
LEU
13
n
14
LEU
13
A
SER
14
n
15
SER
14
A
LYS
15
n
16
LYS
15
A
LEU
16
n
17
LEU
16
A
TYR
17
n
18
TYR
17
A
HIS
18
n
19
HIS
18
A
ILE
19
n
20
ILE
19
A
GLU
20
n
21
GLU
20
A
ASN
21
n
22
ASN
21
A
GLU
22
n
23
GLU
22
A
LEU
23
n
24
LEU
23
A
ALA
24
n
25
ALA
24
A
ARG
25
n
26
ARG
25
A
ILE
26
n
27
ILE
26
A
LYS
27
n
28
LYS
27
A
LYS
28
n
29
LYS
28
A
LEU
29
n
30
LEU
29
A
LEU
30
n
31
LEU
30
A
GLY
31
n
32
GLY
31
A
GLU
32
n
33
GLU
32
A
n
34
33
A
n
1
-1
B
n
2
1
B
MET
2
n
3
MET
2
B
LYS
3
n
4
LYS
3
B
GLN
4
n
5
GLN
4
B
ILE
5
n
6
ILE
5
B
GLU
6
n
7
GLU
6
B
ASP
7
n
8
ASP
7
B
LYS
8
n
9
LYS
8
B
SER
9
n
10
SER
9
B
GLU
10
n
11
GLU
10
B
GLU
11
n
12
GLU
11
B
ILE
12
n
13
ILE
12
B
LEU
13
n
14
LEU
13
B
SER
14
n
15
SER
14
B
LYS
15
n
16
LYS
15
B
LEU
16
n
17
LEU
16
B
TYR
17
n
18
TYR
17
B
HIS
18
n
19
HIS
18
B
ILE
19
n
20
ILE
19
B
GLU
20
n
21
GLU
20
B
ASN
21
n
22
ASN
21
B
GLU
22
n
23
GLU
22
B
LEU
23
n
24
LEU
23
B
ALA
24
n
25
ALA
24
B
ARG
25
n
26
ARG
25
B
ILE
26
n
27
ILE
26
B
LYS
27
n
28
LYS
27
B
LYS
28
n
29
LYS
28
B
LEU
29
n
30
LEU
29
B
LEU
30
n
31
LEU
30
B
GLY
31
n
32
GLY
31
B
GLU
32
n
33
GLU
32
B
n
34
33
B
author_and_software_defined_assembly
PQS
4
tetrameric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
-1.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
24_555
-z+3/4,-y+3/4,-x+3/4
crystal symmetry operation
58.8645000000
58.8645000000
58.8645000000
1
A
HOH
2004
D
HOH
1
A
HOH
2006
D
HOH
1
B
HOH
2002
E
HOH
1
A
ACE
-1
A
ACE
1
1
Y
1
A
ARG
1
A
ARG
2
1
Y
1
A
ARG
33
A
ARG
34
1
Y
1
B
ACE
-1
B
ACE
1
1
Y
1
B
ARG
1
B
ARG
2
1
Y
1
B
ARG
33
B
ARG
34
1
Y
1
4.83
0.50
120.30
125.13
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
25
25
25
N
1
B
B
CB
OG
SER
SER
9
9
0.085
0.013
1.418
1.503
N
1
B
B
CD
OE1
GLU
GLU
22
22
-0.087
0.011
1.252
1.165
N
1
B
B
CD
CE
LYS
LYS
28
28
0.187
0.025
1.508
1.695
N
1
A
B
CL
O
CL
HOH
1033
2004
1.88
1_555
8_645
42.627
0.27265
0.22536
0.22730
2.07
55.90
245
5168
4.5
99.83
4.314
0.118
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.203
0.186
2.07
55.90
28
545
1
0
516
2.070
35.100
1UNU
5435
2.000
0.02700
1
17.0000
5.530
100.0
0.22300
2.07
2.14
3.100
1
5.39
100.0
refinement
REFMAC
data reduction
CrystalClear
(MSC/RIGAKU)
data scaling
SCALA
phasing
MOLREP
GENERAL CONTROL PROTEIN GCN4
Structure Based Engineering of Internal Molecular Surfaces Of Four Helix Bundles
1
N
N
1
N
N
2
N
N
3
N
N
3
N
N
A
MET
2
A
MET
3
HELX_P
A
GLY
31
A
GLY
32
1
1
30
B
MET
2
B
MET
3
HELX_P
B
GLY
31
B
GLY
32
1
2
30
FOUR HELIX BUNDLE
FOUR HELIX BUNDLE, CAVITY
1UNU
PDB
1
1UNU
GCN4_YEAST
UNP
1
P03069
-1
-1
1UNU
-1
-1
1UNU
A
1
1
1
249
281
1UNU
1
33
P03069
A
2
2
34
-1
-1
1UNU
-1
-1
1UNU
B
1
1
1
249
281
1UNU
1
33
P03069
B
2
2
34
1
LEU
conflict
ILE
5
1UNU
A
P03069
UNP
253
6
1
VAL
engineered mutation
SER
9
1UNU
A
P03069
UNP
257
10
1
LEU
conflict
ILE
12
1UNU
A
P03069
UNP
260
13
1
ASN
conflict
LEU
16
1UNU
A
P03069
UNP
264
17
1
LEU
conflict
ILE
19
1UNU
A
P03069
UNP
267
20
1
VAL
conflict
LEU
23
1UNU
A
P03069
UNP
271
24
1
LEU
conflict
ILE
26
1UNU
A
P03069
UNP
274
27
1
VAL
conflict
LEU
30
1UNU
A
P03069
UNP
278
31
3
LEU
conflict
ILE
5
1UNU
B
P03069
UNP
253
6
3
VAL
engineered mutation
SER
9
1UNU
B
P03069
UNP
257
10
3
LEU
conflict
ILE
12
1UNU
B
P03069
UNP
260
13
3
ASN
conflict
LEU
16
1UNU
B
P03069
UNP
264
17
3
LEU
conflict
ILE
19
1UNU
B
P03069
UNP
267
20
3
VAL
conflict
LEU
23
1UNU
B
P03069
UNP
271
24
3
LEU
conflict
ILE
26
1UNU
B
P03069
UNP
274
27
3
VAL
conflict
LEU
30
1UNU
B
P03069
UNP
278
31
BINDING SITE FOR RESIDUE CL A1033
Software
5
A
GLU
10
A
GLU
11
5
1_555
B
LYS
8
B
LYS
9
5
1_555
B
HIS
18
B
HIS
19
5
1_555
B
ASN
21
B
ASN
22
5
1_555
B
HOH
2004
E
HOH
5
1_555
213
P 41 3 2