29.78
23.493
17.682
17.515
A
O5'
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1
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A
O5'
DG
1
1
1.00
1
O
28.60
24.408
18.509
18.243
A
C5'
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1
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A
C5'
DG
1
1
1.00
1
C
28.04
25.726
18.763
17.547
A
C4'
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1
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A
C4'
DG
1
1
1.00
1
C
28.47
26.436
17.523
17.332
A
O4'
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1
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A
O4'
DG
1
1
1.00
1
O
27.47
25.640
19.465
16.191
A
C3'
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1
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A
C3'
DG
1
1
1.00
1
C
30.05
26.531
20.587
16.196
A
O3'
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1
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A
O3'
DG
1
1
1.00
1
O
26.54
26.064
18.401
15.187
A
C2'
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1
ATOM
A
C2'
DG
1
1
1.00
1
C
26.73
26.930
17.456
16.005
A
C1'
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1
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A
C1'
DG
1
1
1.00
1
C
23.83
26.863
16.053
15.595
A
N9
DG
1
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A
N9
DG
1
1
1.00
1
N
23.26
25.751
15.249
15.638
A
C8
DG
1
ATOM
A
C8
DG
1
1
1.00
1
C
25.88
25.990
14.029
15.243
A
N7
DG
1
ATOM
A
N7
DG
1
1
1.00
1
N
22.44
27.341
14.024
14.914
A
C5
DG
1
ATOM
A
C5
DG
1
1
1.00
1
C
23.06
28.165
12.970
14.441
A
C6
DG
1
ATOM
A
C6
DG
1
1
1.00
1
C
23.71
27.866
11.786
14.239
A
O6
DG
1
ATOM
A
O6
DG
1
1
1.00
1
O
19.57
29.466
13.398
14.222
A
N1
DG
1
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A
N1
DG
1
1
1.00
1
N
24.87
29.925
14.668
14.454
A
C2
DG
1
ATOM
A
C2
DG
1
1
1.00
1
C
19.74
31.226
14.861
14.196
A
N2
DG
1
ATOM
A
N2
DG
1
1
1.00
1
N
20.32
29.167
15.665
14.910
A
N3
DG
1
ATOM
A
N3
DG
1
1
1.00
1
N
20.58
27.891
15.276
15.117
A
C4
DG
1
ATOM
A
C4
DG
1
1
1.00
1
C
28.14
26.428
21.701
15.045
A
P
C38
2
HETATM
A
P
C38
1
2
1.00
1
P
28.51
25.024
21.800
14.580
A
O1P
C38
2
HETATM
A
O1P
C38
1
2
1.00
1
O
25.24
27.118
22.903
15.570
A
O2P
C38
2
HETATM
A
O2P
C38
1
2
1.00
1
O
28.70
27.314
21.093
13.876
A
O5'
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2
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A
O5'
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1
2
1.00
1
O
29.64
28.696
20.852
14.089
A
C5'
C38
2
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A
C5'
C38
1
2
1.00
1
C
31.05
29.288
20.113
12.917
A
C4'
C38
2
HETATM
A
C4'
C38
1
2
1.00
1
C
31.04
28.875
18.733
12.923
A
O4'
C38
2
HETATM
A
O4'
C38
1
2
1.00
1
O
31.28
28.928
20.666
11.536
A
C3'
C38
2
HETATM
A
C3'
C38
1
2
1.00
1
C
30.64
30.125
21.148
10.917
A
O3'
C38
2
HETATM
A
O3'
C38
1
2
1.00
1
O
30.76
28.324
19.477
10.798
A
C2'
C38
2
HETATM
A
C2'
C38
1
2
1.00
1
C
30.13
28.845
18.290
11.589
A
C1'
C38
2
HETATM
A
C1'
C38
1
2
1.00
1
C
27.32
28.027
17.074
11.546
A
N1
C38
2
HETATM
A
N1
C38
1
2
1.00
1
N
25.03
28.666
15.854
11.334
A
C2
C38
2
HETATM
A
C2
C38
1
2
1.00
1
C
26.37
29.887
15.850
11.165
A
O2
C38
2
HETATM
A
O2
C38
1
2
1.00
1
O
28.02
27.941
14.717
11.316
A
N3
C38
2
HETATM
A
N3
C38
1
2
1.00
1
N
28.72
26.620
14.766
11.496
A
C4
C38
2
HETATM
A
C4
C38
1
2
1.00
1
C
30.57
25.944
13.614
11.456
A
N4
C38
2
HETATM
A
N4
C38
1
2
1.00
1
N
27.60
25.944
16.004
11.714
A
C5
C38
2
HETATM
A
C5
C38
1
2
1.00
1
C
27.29
26.674
17.121
11.727
A
C6
C38
2
HETATM
A
C6
C38
1
2
1.00
1
C
26.10
23.830
16.055
12.156
A
I
C38
2
HETATM
A
I
C38
1
2
1.00
1
I
34.25
30.043
21.956
9.535
A
P
DG
3
ATOM
A
P
DG
1
3
1.00
1
P
37.23
31.319
22.703
9.366
A
OP1
DG
3
ATOM
A
OP1
DG
1
3
1.00
1
O
33.73
28.750
22.687
9.486
A
OP2
DG
3
ATOM
A
OP2
DG
1
3
1.00
1
O
31.93
29.997
20.794
8.453
A
O5'
DG
3
ATOM
A
O5'
DG
1
3
1.00
1
O
29.55
30.813
19.643
8.623
A
C5'
DG
3
ATOM
A
C5'
DG
1
3
1.00
1
C
26.66
30.220
18.466
7.889
A
C4'
DG
3
ATOM
A
C4'
DG
1
3
1.00
1
C
24.56
28.941
18.088
8.453
A
O4'
DG
3
ATOM
A
O4'
DG
1
3
1.00
1
O
25.59
29.978
18.701
6.393
A
C3'
DG
3
ATOM
A
C3'
DG
1
3
1.00
1
C
25.66
30.701
17.727
5.637
A
O3'
DG
3
ATOM
A
O3'
DG
1
3
1.00
1
O
24.31
28.479
18.509
6.233
A
C2'
DG
3
ATOM
A
C2'
DG
1
3
1.00
1
C
24.60
28.185
17.573
7.384
A
C1'
DG
3
ATOM
A
C1'
DG
1
3
1.00
1
C
23.85
26.793
17.460
7.803
A
N9
DG
3
ATOM
A
N9
DG
1
3
1.00
1
N
22.55
25.881
18.473
7.990
A
C8
DG
3
ATOM
A
C8
DG
1
3
1.00
1
C
20.83
24.696
18.036
8.323
A
N7
DG
3
ATOM
A
N7
DG
1
3
1.00
1
N
19.45
24.835
16.654
8.367
A
C5
DG
3
ATOM
A
C5
DG
1
3
1.00
1
C
21.03
23.889
15.650
8.661
A
C6
DG
3
ATOM
A
C6
DG
1
3
1.00
1
C
19.54
22.690
15.780
8.935
A
O6
DG
3
ATOM
A
O6
DG
1
3
1.00
1
O
20.63
24.457
14.377
8.609
A
N1
DG
3
ATOM
A
N1
DG
1
3
1.00
1
N
22.07
25.769
14.105
8.298
A
C2
DG
3
ATOM
A
C2
DG
1
3
1.00
1
C
21.48
26.132
12.805
8.307
A
N2
DG
3
ATOM
A
N2
DG
1
3
1.00
1
N
22.65
26.660
15.038
8.003
A
N3
DG
3
ATOM
A
N3
DG
1
3
1.00
1
N
23.77
26.128
16.285
8.061
A
C4
DG
3
ATOM
A
C4
DG
1
3
1.00
1
C
28.40
30.703
17.795
4.030
A
P
DA
4
ATOM
A
P
DA
1
4
1.00
1
P
25.95
32.120
17.699
3.611
A
OP1
DA
4
ATOM
A
OP1
DA
1
4
1.00
1
O
29.61
29.877
18.948
3.574
A
OP2
DA
4
ATOM
A
OP2
DA
1
4
1.00
1
O
26.46
29.987
16.438
3.606
A
O5'
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4
ATOM
A
O5'
DA
1
4
1.00
1
O
26.35
30.432
15.194
4.139
A
C5'
DA
4
ATOM
A
C5'
DA
1
4
1.00
1
C
25.94
29.303
14.191
4.136
A
C4'
DA
4
ATOM
A
C4'
DA
1
4
1.00
1
C
22.88
28.266
14.613
5.044
A
O4'
DA
4
ATOM
A
O4'
DA
1
4
1.00
1
O
26.39
28.620
14.029
2.785
A
C3'
DA
4
ATOM
A
C3'
DA
1
4
1.00
1
C
24.87
29.293
13.016
2.035
A
O3'
DA
4
ATOM
A
O3'
DA
1
4
1.00
1
O
26.25
27.211
13.606
3.163
A
C2'
DA
4
ATOM
A
C2'
DA
1
4
1.00
1
C
23.71
26.998
14.189
4.565
A
C1'
DA
4
ATOM
A
C1'
DA
1
4
1.00
1
C
25.71
26.118
15.349
4.606
A
N9
DA
4
ATOM
A
N9
DA
1
4
1.00
1
N
23.97
26.499
16.658
4.476
A
C8
DA
4
ATOM
A
C8
DA
1
4
1.00
1
C
21.52
25.515
17.511
4.576
A
N7
DA
4
ATOM
A
N7
DA
1
4
1.00
1
N
24.04
24.402
16.707
4.778
A
C5
DA
4
ATOM
A
C5
DA
1
4
1.00
1
C
23.07
23.050
17.013
4.955
A
C6
DA
4
ATOM
A
C6
DA
1
4
1.00
1
C
19.00
22.575
18.255
4.986
A
N6
DA
4
ATOM
A
N6
DA
1
4
1.00
1
N
23.46
22.190
15.984
5.113
A
N1
DA
4
ATOM
A
N1
DA
1
4
1.00
1
N
25.22
22.676
14.739
5.109
A
C2
DA
4
ATOM
A
C2
DA
1
4
1.00
1
C
27.72
23.932
14.327
4.965
A
N3
DA
4
ATOM
A
N3
DA
1
4
1.00
1
N
23.10
24.756
15.376
4.794
A
C4
DA
4
ATOM
A
C4
DA
1
4
1.00
1
C
28.19
29.500
13.199
0.458
A
P
DG
5
ATOM
A
P
DG
1
5
1.00
1
P
31.22
30.315
12.057
-0.036
A
OP1
DG
5
ATOM
A
OP1
DG
1
5
1.00
1
O
25.48
29.935
14.581
0.170
A
OP2
DG
5
ATOM
A
OP2
DG
1
5
1.00
1
O
27.55
28.024
13.064
-0.105
A
O5'
DG
5
ATOM
A
O5'
DG
1
5
1.00
1
O
29.06
27.792
12.940
-1.489
A
C5'
DG
5
ATOM
A
C5'
DG
1
5
1.00
1
C
25.75
26.470
12.256
-1.722
A
C4'
DG
5
ATOM
A
C4'
DG
1
5
1.00
1
C
25.78
25.399
13.074
-1.206
A
O4'
DG
5
ATOM
A
O4'
DG
1
5
1.00
1
O
24.64
26.181
12.055
-3.208
A
C3'
DG
5
ATOM
A
C3'
DG
1
5
1.00
1
C
23.52
26.063
10.665
-3.479
A
O3'
DG
5
ATOM
A
O3'
DG
1
5
1.00
1
O
24.64
24.871
12.787
-3.449
A
C2'
DG
5
ATOM
A
C2'
DG
1
5
1.00
1
C
26.04
24.287
12.919
-2.055
A
C1'
DG
5
ATOM
A
C1'
DG
1
5
1.00
1
C
24.71
23.448
14.085
-1.903
A
N9
DG
5
ATOM
A
N9
DG
1
5
1.00
1
N
23.26
23.856
15.396
-1.833
A
C8
DG
5
ATOM
A
C8
DG
1
5
1.00
1
C
26.06
22.872
16.236
-1.728
A
N7
DG
5
ATOM
A
N7
DG
1
5
1.00
1
N
24.45
21.738
15.432
-1.719
A
C5
DG
5
ATOM
A
C5
DG
1
5
1.00
1
C
22.82
20.385
15.782
-1.626
A
C6
DG
5
ATOM
A
C6
DG
1
5
1.00
1
C
21.86
19.884
16.890
-1.524
A
O6
DG
5
ATOM
A
O6
DG
1
5
1.00
1
O
26.52
19.571
14.669
-1.664
A
N1
DG
5
ATOM
A
N1
DG
1
5
1.00
1
N
27.36
20.001
13.387
-1.779
A
C2
DG
5
ATOM
A
C2
DG
1
5
1.00
1
C
28.88
19.038
12.473
-1.832
A
N2
DG
5
ATOM
A
N2
DG
1
5
1.00
1
N
26.35
21.270
13.034
-1.850
A
N3
DG
5
ATOM
A
N3
DG
1
5
1.00
1
N
24.57
22.083
14.113
-1.819
A
C4
DG
5
ATOM
A
C4
DG
1
5
1.00
1
C
23.40
27.270
9.892
-4.198
A
P
DA
6
ATOM
A
P
DA
1
6
1.00
1
P
22.79
28.389
9.811
-3.221
A
OP1
DA
6
ATOM
A
OP1
DA
1
6
1.00
1
O
18.82
27.519
10.439
-5.568
A
OP2
DA
6
ATOM
A
OP2
DA
1
6
1.00
1
O
25.52
26.673
8.432
-4.387
A
O5'
DA
6
ATOM
A
O5'
DA
1
6
1.00
1
O
22.13
26.469
7.567
-3.273
A
C5'
DA
6
ATOM
A
C5'
DA
1
6
1.00
1
C
22.26
26.506
6.129
-3.734
A
C4'
DA
6
ATOM
A
C4'
DA
1
6
1.00
1
C
19.27
25.341
5.808
-4.533
A
O4'
DA
6
ATOM
A
O4'
DA
1
6
1.00
1
O
18.37
27.704
5.804
-4.617
A
C3'
DA
6
ATOM
A
C3'
DA
1
6
1.00
1
C
18.69
28.089
4.447
-4.404
A
O3'
DA
6
ATOM
A
O3'
DA
1
6
1.00
1
O
16.13
27.171
6.039
-6.017
A
C2'
DA
6
ATOM
A
C2'
DA
1
6
1.00
1
C
18.53
25.705
5.630
-5.902
A
C1'
DA
6
ATOM
A
C1'
DA
1
6
1.00
1
C
20.51
24.785
6.414
-6.716
A
N9
DA
6
ATOM
A
N9
DA
1
6
1.00
1
N
17.76
24.949
7.681
-7.231
A
C8
DA
6
ATOM
A
C8
DA
1
6
1.00
1
C
22.83
23.920
8.119
-7.916
A
N7
DA
6
ATOM
A
N7
DA
1
6
1.00
1
N
20.98
23.010
7.067
-7.856
A
C5
DA
6
ATOM
A
C5
DA
1
6
1.00
1
C
22.25
21.713
6.901
-8.388
A
C6
DA
6
ATOM
A
C6
DA
1
6
1.00
1
C
24.44
21.078
7.821
-9.118
A
N6
DA
6
ATOM
A
N6
DA
1
6
1.00
1
N
23.70
21.085
5.733
-8.141
A
N1
DA
6
ATOM
A
N1
DA
1
6
1.00
1
N
23.30
21.716
4.802
-7.418
A
C2
DA
6
ATOM
A
C2
DA
1
6
1.00
1
C
23.98
22.927
4.837
-6.865
A
N3
DA
6
ATOM
A
N3
DA
1
6
1.00
1
N
21.07
23.528
6.015
-7.126
A
C4
DA
6
ATOM
A
C4
DA
1
6
1.00
1
C
21.06
29.194
3.771
-5.354
A
P
DG
7
ATOM
A
P
DG
1
7
1.00
1
P
23.20
29.822
2.666
-4.585
A
OP1
DG
7
ATOM
A
OP1
DG
1
7
1.00
1
O
17.69
30.043
4.850
-5.925
A
OP2
DG
7
ATOM
A
OP2
DG
1
7
1.00
1
O
21.86
28.319
3.135
-6.520
A
O5'
DG
7
ATOM
A
O5'
DG
1
7
1.00
1
O
22.03
27.257
2.232
-6.210
A
C5'
DG
7
ATOM
A
C5'
DG
1
7
1.00
1
C
22.56
26.430
1.949
-7.441
A
C4'
DG
7
ATOM
A
C4'
DG
1
7
1.00
1
C
18.45
25.824
3.170
-7.916
A
O4'
DG
7
ATOM
A
O4'
DG
1
7
1.00
1
O
24.83
27.209
1.355
-8.616
A
C3'
DG
7
ATOM
A
C3'
DG
1
7
1.00
1
C
31.16
26.778
0.006
-8.833
A
O3'
DG
7
ATOM
A
O3'
DG
1
7
1.00
1
O
20.69
26.897
2.259
-9.801
A
C2'
DG
7
ATOM
A
C2'
DG
1
7
1.00
1
C
18.07
25.780
3.179
-9.326
A
C1'
DG
7
ATOM
A
C1'
DG
1
7
1.00
1
C
17.16
25.895
4.575
-9.758
A
N9
DG
7
ATOM
A
N9
DG
1
7
1.00
1
N
15.81
26.989
5.402
-9.641
A
C8
DG
7
ATOM
A
C8
DG
1
7
1.00
1
C
14.35
26.760
6.614
-10.074
A
N7
DG
7
ATOM
A
N7
DG
1
7
1.00
1
N
17.02
25.441
6.579
-10.510
A
C5
DG
7
ATOM
A
C5
DG
1
7
1.00
1
C
19.94
24.621
7.603
-11.073
A
C6
DG
7
ATOM
A
C6
DG
1
7
1.00
1
C
18.33
24.915
8.787
-11.302
A
O6
DG
7
ATOM
A
O6
DG
1
7
1.00
1
O
14.04
23.342
7.129
-11.373
A
N1
DG
7
ATOM
A
N1
DG
1
7
1.00
1
N
17.71
22.907
5.840
-11.158
A
C2
DG
7
ATOM
A
C2
DG
1
7
1.00
1
C
16.79
21.635
5.566
-11.495
A
N2
DG
7
ATOM
A
N2
DG
1
7
1.00
1
N
18.38
23.661
4.885
-10.643
A
N3
DG
7
ATOM
A
N3
DG
1
7
1.00
1
N
16.32
24.898
5.319
-10.339
A
C4
DG
7
ATOM
A
C4
DG
1
7
1.00
1
C
33.43
27.237
-0.790
-10.153
A
P
DC
8
ATOM
A
P
DC
1
8
1.00
1
P
36.18
27.259
-2.228
-9.797
A
OP1
DC
8
ATOM
A
OP1
DC
1
8
1.00
1
O
34.40
28.463
-0.152
-10.689
A
OP2
DC
8
ATOM
A
OP2
DC
1
8
1.00
1
O
31.91
26.038
-0.539
-11.177
A
O5'
DC
8
ATOM
A
O5'
DC
1
8
1.00
1
O
29.08
24.683
-0.775
-10.782
A
C5'
DC
8
ATOM
A
C5'
DC
1
8
1.00
1
C
29.08
23.720
-0.325
-11.861
A
C4'
DC
8
ATOM
A
C4'
DC
1
8
1.00
1
C
25.39
23.715
1.119
-11.997
A
O4'
DC
8
ATOM
A
O4'
DC
1
8
1.00
1
O
28.05
23.974
-0.882
-13.264
A
C3'
DC
8
ATOM
A
C3'
DC
1
8
1.00
1
C
31.56
22.731
-1.030
-13.939
A
O3'
DC
8
ATOM
A
O3'
DC
1
8
1.00
1
O
28.43
24.650
0.281
-13.961
A
C2'
DC
8
ATOM
A
C2'
DC
1
8
1.00
1
C
24.66
23.894
1.453
-13.365
A
C1'
DC
8
ATOM
A
C1'
DC
1
8
1.00
1
C
18.79
24.599
2.739
-13.434
A
N1
DC
8
ATOM
A
N1
DC
1
8
1.00
1
N
18.15
23.889
3.871
-13.837
A
C2
DC
8
ATOM
A
C2
DC
1
8
1.00
1
C
17.88
22.681
3.754
-14.087
A
O2
DC
8
ATOM
A
O2
DC
1
8
1.00
1
O
12.86
24.523
5.057
-13.937
A
N3
DC
8
ATOM
A
N3
DC
1
8
1.00
1
N
16.22
25.826
5.138
-13.666
A
C4
DC
8
ATOM
A
C4
DC
1
8
1.00
1
C
14.06
26.417
6.329
-13.789
A
N4
DC
8
ATOM
A
N4
DC
1
8
1.00
1
N
18.26
26.581
4.003
-13.247
A
C5
DC
8
ATOM
A
C5
DC
1
8
1.00
1
C
13.93
25.933
2.835
-13.144
A
C6
DC
8
ATOM
A
C6
DC
1
8
1.00
1
C
23.99
20.684
12.502
-19.490
B
O5'
DG
9
ATOM
B
O5'
DG
1
1
1.00
1
O
17.72
20.131
13.103
-18.334
B
C5'
DG
9
ATOM
B
C5'
DG
1
1
1.00
1
C
17.69
19.028
12.242
-17.764
B
C4'
DG
9
ATOM
B
C4'
DG
1
1
1.00
1
C
19.08
19.545
10.936
-17.430
B
O4'
DG
9
ATOM
B
O4'
DG
1
1
1.00
1
O
20.06
18.429
12.784
-16.476
B
C3'
DG
9
ATOM
B
C3'
DG
1
1
1.00
1
C
23.66
17.061
12.391
-16.360
B
O3'
DG
9
ATOM
B
O3'
DG
1
1
1.00
1
O
19.58
19.268
12.124
-15.397
B
C2'
DG
9
ATOM
B
C2'
DG
1
1
1.00
1
C
16.56
19.712
10.803
-16.018
B
C1'
DG
9
ATOM
B
C1'
DG
1
1
1.00
1
C
16.41
21.109
10.516
-15.748
B
N9
DG
9
ATOM
B
N9
DG
1
1
1.00
1
N
16.06
22.153
11.414
-15.778
B
C8
DG
9
ATOM
B
C8
DG
1
1
1.00
1
C
17.38
23.302
10.891
-15.452
B
N7
DG
9
ATOM
B
N7
DG
1
1
1.00
1
N
13.85
23.008
9.560
-15.198
B
C5
DG
9
ATOM
B
C5
DG
1
1
1.00
1
C
11.97
23.860
8.496
-14.794
B
C6
DG
9
ATOM
B
C6
DG
1
1
1.00
1
C
11.78
25.077
8.527
-14.569
B
O6
DG
9
ATOM
B
O6
DG
1
1
1.00
1
O
7.18
23.155
7.307
-14.650
B
N1
DG
9
ATOM
B
N1
DG
1
1
1.00
1
N
11.41
21.807
7.162
-14.849
B
C2
DG
9
ATOM
B
C2
DG
1
1
1.00
1
C
9.37
21.309
5.941
-14.625
B
N2
DG
9
ATOM
B
N2
DG
1
1
1.00
1
N
11.58
20.999
8.142
-15.228
B
N3
DG
9
ATOM
B
N3
DG
1
1
1.00
1
N
13.71
21.671
9.303
-15.381
B
C4
DG
9
ATOM
B
C4
DG
1
1
1.00
1
C
25.69
16.150
13.027
-15.203
B
P
C38
10
HETATM
B
P
C38
1
2
1.00
1
P
25.42
16.944
14.094
-14.543
B
O1P
C38
10
HETATM
B
O1P
C38
1
2
1.00
1
O
29.50
14.828
13.346
-15.789
B
O2P
C38
10
HETATM
B
O2P
C38
1
2
1.00
1
O
23.19
15.965
11.850
-14.150
B
O5'
C38
10
HETATM
B
O5'
C38
1
2
1.00
1
O
22.14
15.577
10.546
-14.567
B
C5'
C38
10
HETATM
B
C5'
C38
1
2
1.00
1
C
21.96
15.998
9.534
-13.528
B
C4'
C38
10
HETATM
B
C4'
C38
1
2
1.00
1
C
17.00
17.444
9.452
-13.472
B
O4'
C38
10
HETATM
B
O4'
C38
1
2
1.00
1
O
22.01
15.533
9.852
-12.103
B
C3'
C38
10
HETATM
B
C3'
C38
1
2
1.00
1
C
21.36
14.900
8.695
-11.559
B
O3'
C38
10
HETATM
B
O3'
C38
1
2
1.00
1
O
19.84
16.815
10.197
-11.353
B
C2'
C38
10
HETATM
B
C2'
C38
1
2
1.00
1
C
18.62
17.850
9.391
-12.119
B
C1'
C38
10
HETATM
B
C1'
C38
1
2
1.00
1
C
16.87
19.241
9.852
-12.051
B
N1
C38
10
HETATM
B
N1
C38
1
2
1.00
1
N
15.82
20.229
8.886
-11.819
B
C2
C38
10
HETATM
B
C2
C38
1
2
1.00
1
C
7.89
19.883
7.721
-11.592
B
O2
C38
10
HETATM
B
O2
C38
1
2
1.00
1
O
12.04
21.520
9.256
-11.828
B
N3
C38
10
HETATM
B
N3
C38
1
2
1.00
1
N
18.36
21.851
10.521
-12.027
B
C4
C38
10
HETATM
B
C4
C38
1
2
1.00
1
C
12.19
23.141
10.838
-12.029
B
N4
C38
10
HETATM
B
N4
C38
1
2
1.00
1
N
19.04
20.872
11.530
-12.229
B
C5
C38
10
HETATM
B
C5
C38
1
2
1.00
1
C
15.23
19.586
11.160
-12.238
B
C6
C38
10
HETATM
B
C6
C38
1
2
1.00
1
C
24.11
21.439
13.599
-12.482
B
I
C38
10
HETATM
B
I
C38
1
2
1.00
1
I
24.93
14.073
8.807
-10.192
B
P
DG
11
ATOM
B
P
DG
1
3
1.00
1
P
21.19
13.040
7.736
-10.247
B
OP1
DG
11
ATOM
B
OP1
DG
1
3
1.00
1
O
28.07
13.653
10.218
-9.984
B
OP2
DG
11
ATOM
B
OP2
DG
1
3
1.00
1
O
23.71
15.163
8.409
-9.105
B
O5'
DG
11
ATOM
B
O5'
DG
1
3
1.00
1
O
24.59
15.924
7.215
-9.284
B
C5'
DG
11
ATOM
B
C5'
DG
1
3
1.00
1
C
24.72
17.172
7.236
-8.433
B
C4'
DG
11
ATOM
B
C4'
DG
1
3
1.00
1
C
28.26
17.999
8.361
-8.815
B
O4'
DG
11
ATOM
B
O4'
DG
1
3
1.00
1
O
26.27
16.959
7.346
-6.919
B
C3'
DG
11
ATOM
B
C3'
DG
1
3
1.00
1
C
31.24
17.790
6.388
-6.252
B
O3'
DG
11
ATOM
B
O3'
DG
1
3
1.00
1
O
28.27
17.408
8.758
-6.595
B
C2'
DG
11
ATOM
B
C2'
DG
1
3
1.00
1
C
28.48
18.468
9.010
-7.650
B
C1'
DG
11
ATOM
B
C1'
DG
1
3
1.00
1
C
28.18
18.672
10.416
-7.974
B
N9
DG
11
ATOM
B
N9
DG
1
3
1.00
1
N
26.81
17.720
11.406
-8.025
B
C8
DG
11
ATOM
B
C8
DG
1
3
1.00
1
C
26.73
18.213
12.573
-8.335
B
N7
DG
11
ATOM
B
N7
DG
1
3
1.00
1
N
27.62
19.568
12.337
-8.508
B
C5
DG
11
ATOM
B
C5
DG
1
3
1.00
1
C
27.28
20.609
13.222
-8.859
B
C6
DG
11
ATOM
B
C6
DG
1
3
1.00
1
C
26.60
20.541
14.426
-9.112
B
O6
DG
11
ATOM
B
O6
DG
1
3
1.00
1
O
26.97
21.836
12.572
-8.908
B
N1
DG
11
ATOM
B
N1
DG
1
3
1.00
1
N
27.44
22.032
11.242
-8.653
B
C2
DG
11
ATOM
B
C2
DG
1
3
1.00
1
C
26.61
23.294
10.813
-8.724
B
N2
DG
11
ATOM
B
N2
DG
1
3
1.00
1
N
29.97
21.064
10.399
-8.344
B
N3
DG
11
ATOM
B
N3
DG
1
3
1.00
1
N
28.23
19.866
11.012
-8.285
B
C4
DG
11
ATOM
B
C4
DG
1
3
1.00
1
C
32.52
17.869
6.364
-4.647
B
P
DA
12
ATOM
B
P
DA
1
4
1.00
1
P
33.95
17.900
4.933
-4.253
B
OP1
DA
12
ATOM
B
OP1
DA
1
4
1.00
1
O
34.19
16.818
7.254
-4.089
B
OP2
DA
12
ATOM
B
OP2
DA
1
4
1.00
1
O
33.70
19.284
7.022
-4.318
B
O5'
DA
12
ATOM
B
O5'
DA
1
4
1.00
1
O
32.11
20.497
6.387
-4.716
B
C5'
DA
12
ATOM
B
C5'
DA
1
4
1.00
1
C
29.42
21.655
7.353
-4.610
B
C4'
DA
12
ATOM
B
C4'
DA
1
4
1.00
1
C
29.04
21.473
8.468
-5.509
B
O4'
DA
12
ATOM
B
O4'
DA
1
4
1.00
1
O
27.64
21.817
7.988
-3.239
B
C3'
DA
12
ATOM
B
C3'
DA
1
4
1.00
1
C
29.30
22.578
7.122
-2.402
B
O3'
DA
12
ATOM
B
O3'
DA
1
4
1.00
1
O
29.54
22.577
9.260
-3.557
B
C2'
DA
12
ATOM
B
C2'
DA
1
4
1.00
1
C
30.41
22.044
9.644
-4.939
B
C1'
DA
12
ATOM
B
C1'
DA
1
4
1.00
1
C
32.12
21.012
10.675
-4.917
B
N9
DA
12
ATOM
B
N9
DA
1
4
1.00
1
N
33.28
19.656
10.504
-4.774
B
C8
DA
12
ATOM
B
C8
DA
1
4
1.00
1
C
33.80
18.973
11.623
-4.806
B
N7
DA
12
ATOM
B
N7
DA
1
4
1.00
1
N
32.59
19.947
12.601
-4.978
B
C5
DA
12
ATOM
B
C5
DA
1
4
1.00
1
C
33.97
19.869
13.995
-5.087
B
C6
DA
12
ATOM
B
C6
DA
1
4
1.00
1
C
37.96
18.725
14.681
-5.042
B
N6
DA
12
ATOM
B
N6
DA
1
4
1.00
1
N
33.20
21.025
14.674
-5.245
B
N1
DA
12
ATOM
B
N1
DA
1
4
1.00
1
N
28.98
22.171
13.988
-5.284
B
C2
DA
12
ATOM
B
C2
DA
1
4
1.00
1
C
30.03
22.371
12.680
-5.192
B
N3
DA
12
ATOM
B
N3
DA
1
4
1.00
1
N
30.50
21.200
12.032
-5.039
B
C4
DA
12
ATOM
B
C4
DA
1
4
1.00
1
C
26.90
22.247
7.040
-0.834
B
P
DG
13
ATOM
B
P
DG
1
5
1.00
1
P
29.92
22.972
5.887
-0.258
B
OP1
DG
13
ATOM
B
OP1
DG
1
5
1.00
1
O
25.01
20.772
7.134
-0.674
B
OP2
DG
13
ATOM
B
OP2
DG
1
5
1.00
1
O
27.06
22.909
8.359
-0.248
B
O5'
DG
13
ATOM
B
O5'
DG
1
5
1.00
1
O
27.53
23.130
8.487
1.144
B
C5'
DG
13
ATOM
B
C5'
DG
1
5
1.00
1
C
26.16
23.903
9.748
1.433
B
C4'
DG
13
ATOM
B
C4'
DG
1
5
1.00
1
C
25.41
23.145
10.887
0.965
B
O4'
DG
13
ATOM
B
O4'
DG
1
5
1.00
1
O
25.09
24.135
9.964
2.929
B
C3'
DG
13
ATOM
B
C3'
DG
1
5
1.00
1
C
27.39
25.520
10.177
3.175
B
O3'
DG
13
ATOM
B
O3'
DG
1
5
1.00
1
O
25.07
23.297
11.184
3.268
B
C2'
DG
13
ATOM
B
C2'
DG
1
5
1.00
1
C
24.55
23.214
11.904
1.937
B
C1'
DG
13
ATOM
B
C1'
DG
1
5
1.00
1
C
25.44
22.035
12.745
1.793
B
N9
DG
13
ATOM
B
N9
DG
1
5
1.00
1
N
24.99
20.724
12.343
1.731
B
C8
DG
13
ATOM
B
C8
DG
1
5
1.00
1
C
26.32
19.885
13.339
1.673
B
N7
DG
13
ATOM
B
N7
DG
1
5
1.00
1
N
27.21
20.694
14.467
1.676
B
C5
DG
13
ATOM
B
C5
DG
1
5
1.00
1
C
25.41
20.353
15.845
1.646
B
C6
DG
13
ATOM
B
C6
DG
1
5
1.00
1
C
25.87
19.237
16.363
1.591
B
O6
DG
13
ATOM
B
O6
DG
1
5
1.00
1
O
25.77
21.481
16.648
1.687
B
N1
DG
13
ATOM
B
N1
DG
1
5
1.00
1
N
26.94
22.773
16.195
1.740
B
C2
DG
13
ATOM
B
C2
DG
1
5
1.00
1
C
21.95
23.725
17.134
1.796
B
N2
DG
13
ATOM
B
N2
DG
1
5
1.00
1
N
26.82
23.106
14.919
1.751
B
N3
DG
13
ATOM
B
N3
DG
1
5
1.00
1
N
26.72
22.019
14.116
1.728
B
C4
DG
13
ATOM
B
C4
DG
1
5
1.00
1
C
23.48
26.385
9.023
3.884
B
P
DA
14
ATOM
B
P
DA
1
6
1.00
1
P
22.81
26.344
7.822
3.019
B
OP1
DA
14
ATOM
B
OP1
DA
1
6
1.00
1
O
25.59
25.963
8.924
5.306
B
OP2
DA
14
ATOM
B
OP2
DA
1
6
1.00
1
O
23.11
27.864
9.598
3.860
B
O5'
DA
14
ATOM
B
O5'
DA
1
6
1.00
1
O
22.21
28.611
9.633
2.653
B
C5'
DA
14
ATOM
B
C5'
DA
1
6
1.00
1
C
20.81
30.072
9.436
2.965
B
C4'
DA
14
ATOM
B
C4'
DA
1
6
1.00
1
C
19.13
30.548
10.548
3.758
B
O4'
DA
14
ATOM
B
O4'
DA
1
6
1.00
1
O
19.26
30.343
8.199
3.811
B
C3'
DA
14
ATOM
B
C3'
DA
1
6
1.00
1
C
17.67
31.664
7.740
3.534
B
O3'
DA
14
ATOM
B
O3'
DA
1
6
1.00
1
O
20.42
30.217
8.731
5.228
B
C2'
DA
14
ATOM
B
C2'
DA
1
6
1.00
1
C
22.26
30.805
10.127
5.096
B
C1'
DA
14
ATOM
B
C1'
DA
1
6
1.00
1
C
22.09
30.259
11.133
5.999
B
N9
DA
14
ATOM
B
N9
DA
1
6
1.00
1
N
21.75
29.016
11.206
6.592
B
C8
DA
14
ATOM
B
C8
DA
1
6
1.00
1
C
20.39
28.843
12.265
7.344
B
N7
DA
14
ATOM
B
N7
DA
1
6
1.00
1
N
20.36
30.058
12.940
7.246
B
C5
DA
14
ATOM
B
C5
DA
1
6
1.00
1
C
20.25
30.513
14.143
7.807
B
C6
DA
14
ATOM
B
C6
DA
1
6
1.00
1
C
22.87
29.787
14.908
8.619
B
N6
DA
14
ATOM
B
N6
DA
1
6
1.00
1
N
22.97
31.767
14.536
7.498
B
N1
DA
14
ATOM
B
N1
DA
1
6
1.00
1
N
23.65
32.504
13.766
6.690
B
C2
DA
14
ATOM
B
C2
DA
1
6
1.00
1
C
26.71
32.190
12.614
6.105
B
N3
DA
14
ATOM
B
N3
DA
1
6
1.00
1
N
23.71
30.929
12.253
6.430
B
C4
DA
14
ATOM
B
C4
DA
1
6
1.00
1
C
20.53
32.265
6.496
4.349
B
P
DG
15
ATOM
B
P
DG
1
7
1.00
1
P
18.04
33.365
5.933
3.532
B
OP1
DG
15
ATOM
B
OP1
DG
1
7
1.00
1
O
22.52
31.119
5.634
4.748
B
OP2
DG
15
ATOM
B
OP2
DG
1
7
1.00
1
O
17.93
32.902
7.151
5.656
B
O5'
DG
15
ATOM
B
O5'
DG
1
7
1.00
1
O
20.02
33.936
8.133
5.551
B
C5'
DG
15
ATOM
B
C5'
DG
1
7
1.00
1
C
19.64
34.285
8.685
6.916
B
C4'
DG
15
ATOM
B
C4'
DG
1
7
1.00
1
C
20.51
33.160
9.431
7.441
B
O4'
DG
15
ATOM
B
O4'
DG
1
7
1.00
1
O
18.62
34.661
7.667
8.004
B
C3'
DG
15
ATOM
B
C3'
DG
1
7
1.00
1
C
21.18
35.774
8.164
8.764
B
O3'
DG
15
ATOM
B
O3'
DG
1
7
1.00
1
O
19.31
33.433
7.650
8.898
B
C2'
DG
15
ATOM
B
C2'
DG
1
7
1.00
1
C
20.79
33.000
9.098
8.808
B
C1'
DG
15
ATOM
B
C1'
DG
1
7
1.00
1
C
18.02
31.616
9.349
9.177
B
N9
DG
15
ATOM
B
N9
DG
1
7
1.00
1
N
17.22
30.555
8.492
9.026
B
C8
DG
15
ATOM
B
C8
DG
1
7
1.00
1
C
15.76
29.428
8.990
9.441
B
N7
DG
15
ATOM
B
N7
DG
1
7
1.00
1
N
17.35
29.761
10.257
9.900
B
C5
DG
15
ATOM
B
C5
DG
1
7
1.00
1
C
15.07
28.948
11.265
10.469
B
C6
DG
15
ATOM
B
C6
DG
1
7
1.00
1
C
12.95
27.736
11.244
10.690
B
O6
DG
15
ATOM
B
O6
DG
1
7
1.00
1
O
13.44
29.691
12.392
10.795
B
N1
DG
15
ATOM
B
N1
DG
1
7
1.00
1
N
16.53
31.040
12.529
10.599
B
C2
DG
15
ATOM
B
C2
DG
1
7
1.00
1
C
16.41
31.580
13.698
10.987
B
N2
DG
15
ATOM
B
N2
DG
1
7
1.00
1
N
19.56
31.810
11.593
10.065
B
N3
DG
15
ATOM
B
N3
DG
1
7
1.00
1
N
16.56
31.105
10.489
9.743
B
C4
DG
15
ATOM
B
C4
DG
1
7
1.00
1
C
21.63
36.645
7.159
9.680
B
P
DC
16
ATOM
B
P
DC
1
8
1.00
1
P
23.62
37.952
6.923
9.016
B
OP1
DC
16
ATOM
B
OP1
DC
1
8
1.00
1
O
17.20
35.794
6.001
10.069
B
OP2
DC
16
ATOM
B
OP2
DC
1
8
1.00
1
O
19.76
36.930
8.009
10.993
B
O5'
DC
16
ATOM
B
O5'
DC
1
8
1.00
1
O
23.44
37.494
9.310
10.915
B
C5'
DC
16
ATOM
B
C5'
DC
1
8
1.00
1
C
25.94
36.936
10.175
12.019
B
C4'
DC
16
ATOM
B
C4'
DC
1
8
1.00
1
C
24.09
35.554
10.501
11.780
B
O4'
DC
16
ATOM
B
O4'
DC
1
8
1.00
1
O
27.21
36.919
9.501
13.384
B
C3'
DC
16
ATOM
B
C3'
DC
1
8
1.00
1
C
32.18
38.197
9.479
13.997
B
O3'
DC
16
ATOM
B
O3'
DC
1
8
1.00
1
O
25.85
35.849
10.275
14.134
B
C2'
DC
16
ATOM
B
C2'
DC
1
8
1.00
1
C
22.19
34.981
10.882
13.027
B
C1'
DC
16
ATOM
B
C1'
DC
1
8
1.00
1
C
22.63
33.576
10.460
13.040
B
N1
DC
16
ATOM
B
N1
DC
1
8
1.00
1
N
21.96
32.604
11.421
13.288
B
C2
DC
16
ATOM
B
C2
DC
1
8
1.00
1
C
20.86
32.968
12.581
13.520
B
O2
DC
16
ATOM
B
O2
DC
1
8
1.00
1
O
19.77
31.300
11.072
13.282
B
N3
DC
16
ATOM
B
N3
DC
1
8
1.00
1
N
21.17
30.950
9.811
13.035
B
C4
DC
16
ATOM
B
C4
DC
1
8
1.00
1
C
22.51
29.645
9.521
13.023
B
N4
DC
16
ATOM
B
N4
DC
1
8
1.00
1
N
21.25
31.918
8.795
12.791
B
C5
DC
16
ATOM
B
C5
DC
1
8
1.00
1
C
20.38
33.210
9.162
12.797
B
C6
DC
16
ATOM
B
C6
DC
1
8
1.00
1
C
13.97
18.090
18.190
0.000
A
K
K
114
HETATM
C
K
K
2
0.25
1
K
23.21
18.090
18.190
3.375
B
K
K
115
HETATM
D
K
K
2
0.50
1
K
46.66
18.091
18.191
7.314
A
O
HOH
17
HETATM
E
O
HOH
3
0.50
1
O
26.34
22.504
19.785
9.579
A
O
HOH
19
HETATM
E
O
HOH
3
1.00
1
O
22.94
28.959
24.448
14.880
A
O
HOH
21
HETATM
E
O
HOH
3
1.00
1
O
20.32
23.846
20.229
12.591
A
O
HOH
23
HETATM
E
O
HOH
3
1.00
1
O
29.26
27.452
1.050
-3.231
A
O
HOH
24
HETATM
E
O
HOH
3
1.00
1
O
23.09
25.716
11.861
-6.830
A
O
HOH
25
HETATM
E
O
HOH
3
1.00
1
O
10.33
30.860
1.168
-9.743
A
O
HOH
26
HETATM
E
O
HOH
3
1.00
1
O
41.57
33.307
22.344
11.706
A
O
HOH
28
HETATM
E
O
HOH
3
1.00
1
O
15.71
31.616
20.160
14.795
A
O
HOH
29
HETATM
E
O
HOH
3
1.00
1
O
29.18
33.601
15.992
16.347
A
O
HOH
31
HETATM
E
O
HOH
3
1.00
1
O
24.22
28.951
8.805
-10.955
A
O
HOH
33
HETATM
E
O
HOH
3
1.00
1
O
48.22
22.382
2.673
-10.147
A
O
HOH
35
HETATM
E
O
HOH
3
1.00
1
O
24.20
34.194
16.003
2.721
A
O
HOH
37
HETATM
E
O
HOH
3
1.00
1
O
33.52
34.054
19.245
13.202
A
O
HOH
38
HETATM
E
O
HOH
3
1.00
1
O
27.43
23.814
12.605
14.898
A
O
HOH
42
HETATM
E
O
HOH
3
1.00
1
O
30.26
22.546
1.043
-7.120
A
O
HOH
44
HETATM
E
O
HOH
3
1.00
1
O
45.45
19.298
4.377
-9.644
A
O
HOH
46
HETATM
E
O
HOH
3
1.00
1
O
39.51
19.269
1.393
-8.438
A
O
HOH
47
HETATM
E
O
HOH
3
1.00
1
O
32.74
19.889
19.134
5.115
A
O
HOH
49
HETATM
E
O
HOH
3
1.00
1
O
26.64
34.883
21.550
8.791
A
O
HOH
51
HETATM
E
O
HOH
3
1.00
1
O
21.54
20.763
-0.973
-9.316
A
O
HOH
53
HETATM
E
O
HOH
3
1.00
1
O
42.31
25.409
21.610
9.949
A
O
HOH
55
HETATM
E
O
HOH
3
1.00
1
O
45.79
31.449
0.443
-6.808
A
O
HOH
58
HETATM
E
O
HOH
3
1.00
1
O
32.90
32.168
18.029
10.502
A
O
HOH
61
HETATM
E
O
HOH
3
1.00
1
O
25.24
23.591
2.846
-5.427
A
O
HOH
63
HETATM
E
O
HOH
3
1.00
1
O
31.85
36.180
18.190
4.048
A
O
HOH
64
HETATM
E
O
HOH
3
0.50
1
O
26.73
38.115
17.621
6.782
A
O
HOH
66
HETATM
E
O
HOH
3
1.00
1
O
26.92
27.314
10.187
-8.998
A
O
HOH
67
HETATM
E
O
HOH
3
1.00
1
O
19.68
30.904
11.313
-11.470
A
O
HOH
71
HETATM
E
O
HOH
3
1.00
1
O
24.58
20.707
11.753
5.453
A
O
HOH
76
HETATM
E
O
HOH
3
1.00
1
O
35.01
32.183
7.437
-3.264
A
O
HOH
81
HETATM
E
O
HOH
3
1.00
1
O
45.76
34.117
8.322
-5.977
A
O
HOH
85
HETATM
E
O
HOH
3
1.00
1
O
24.98
19.654
14.619
7.859
A
O
HOH
86
HETATM
E
O
HOH
3
1.00
1
O
55.60
30.717
1.827
0.116
A
O
HOH
87
HETATM
E
O
HOH
3
1.00
1
O
19.36
23.354
12.303
11.845
A
O
HOH
90
HETATM
E
O
HOH
3
1.00
1
O
63.44
19.666
-2.102
-15.122
A
O
HOH
92
HETATM
E
O
HOH
3
1.00
1
O
33.99
34.370
1.327
-5.809
A
O
HOH
93
HETATM
E
O
HOH
3
1.00
1
O
29.07
21.067
14.430
11.133
A
O
HOH
94
HETATM
E
O
HOH
3
1.00
1
O
38.90
22.235
19.533
19.463
A
O
HOH
97
HETATM
E
O
HOH
3
1.00
1
O
37.42
32.434
21.744
5.212
A
O
HOH
98
HETATM
E
O
HOH
3
1.00
1
O
37.33
22.234
12.283
8.348
A
O
HOH
99
HETATM
E
O
HOH
3
1.00
1
O
42.10
18.774
17.052
11.049
A
O
HOH
100
HETATM
E
O
HOH
3
1.00
1
O
39.83
19.980
18.624
8.931
A
O
HOH
102
HETATM
E
O
HOH
3
1.00
1
O
62.98
32.012
17.343
12.990
A
O
HOH
103
HETATM
E
O
HOH
3
1.00
1
O
36.35
25.397
23.582
12.550
A
O
HOH
105
HETATM
E
O
HOH
3
1.00
1
O
30.25
36.124
21.633
5.731
A
O
HOH
106
HETATM
E
O
HOH
3
1.00
1
O
67.33
29.337
9.093
-0.566
A
O
HOH
109
HETATM
E
O
HOH
3
1.00
1
O
45.09
29.208
7.995
-7.613
A
O
HOH
110
HETATM
E
O
HOH
3
1.00
1
O
42.02
27.789
21.981
4.965
A
O
HOH
112
HETATM
E
O
HOH
3
1.00
1
O
43.06
27.501
19.753
2.143
A
O
HOH
113
HETATM
E
O
HOH
3
1.00
1
O
8.47
35.045
14.296
14.207
B
O
HOH
18
HETATM
F
O
HOH
3
1.00
1
O
32.19
12.456
6.366
-13.060
B
O
HOH
20
HETATM
F
O
HOH
3
1.00
1
O
15.84
23.200
13.193
-20.156
B
O
HOH
22
HETATM
F
O
HOH
3
1.00
1
O
21.09
14.536
4.115
-13.435
B
O
HOH
27
HETATM
F
O
HOH
3
1.00
1
O
36.80
28.894
6.785
12.621
B
O
HOH
30
HETATM
F
O
HOH
3
1.00
1
O
24.06
10.490
3.769
-13.163
B
O
HOH
32
HETATM
F
O
HOH
3
1.00
1
O
17.19
17.491
5.501
-11.747
B
O
HOH
34
HETATM
F
O
HOH
3
1.00
1
O
16.19
18.087
6.733
-14.646
B
O
HOH
36
HETATM
F
O
HOH
3
1.00
1
O
28.38
26.506
3.362
-0.035
B
O
HOH
39
HETATM
F
O
HOH
3
1.00
1
O
21.39
37.347
3.992
10.958
B
O
HOH
40
HETATM
F
O
HOH
3
1.00
1
O
55.17
25.918
8.863
12.541
B
O
HOH
41
HETATM
F
O
HOH
3
1.00
1
O
27.85
36.397
2.201
13.312
B
O
HOH
43
HETATM
F
O
HOH
3
1.00
1
O
53.28
37.361
-1.091
9.658
B
O
HOH
45
HETATM
F
O
HOH
3
1.00
1
O
26.08
39.261
11.612
14.788
B
O
HOH
48
HETATM
F
O
HOH
3
1.00
1
O
33.19
13.756
3.619
-9.449
B
O
HOH
50
HETATM
F
O
HOH
3
1.00
1
O
33.83
40.618
7.389
10.259
B
O
HOH
52
HETATM
F
O
HOH
3
1.00
1
O
38.66
11.401
9.846
-16.882
B
O
HOH
54
HETATM
F
O
HOH
3
1.00
1
O
27.00
33.637
16.203
9.201
B
O
HOH
56
HETATM
F
O
HOH
3
1.00
1
O
54.73
26.182
9.077
9.380
B
O
HOH
57
HETATM
F
O
HOH
3
1.00
1
O
39.85
16.232
3.156
-2.374
B
O
HOH
59
HETATM
F
O
HOH
3
1.00
1
O
38.55
33.944
1.904
15.354
B
O
HOH
60
HETATM
F
O
HOH
3
1.00
1
O
30.34
31.621
3.911
15.427
B
O
HOH
62
HETATM
F
O
HOH
3
1.00
1
O
23.22
39.033
1.502
11.530
B
O
HOH
65
HETATM
F
O
HOH
3
1.00
1
O
19.09
39.998
3.409
13.716
B
O
HOH
68
HETATM
F
O
HOH
3
1.00
1
O
34.31
28.960
5.839
0.776
B
O
HOH
69
HETATM
F
O
HOH
3
1.00
1
O
27.56
14.294
10.892
-18.053
B
O
HOH
70
HETATM
F
O
HOH
3
1.00
1
O
67.27
32.957
4.451
0.133
B
O
HOH
72
HETATM
F
O
HOH
3
1.00
1
O
37.11
11.712
12.311
-18.789
B
O
HOH
73
HETATM
F
O
HOH
3
1.00
1
O
24.82
24.794
11.046
6.147
B
O
HOH
74
HETATM
F
O
HOH
3
1.00
1
O
7.65
18.090
5.399
0.000
B
O
HOH
75
HETATM
F
O
HOH
3
0.50
1
O
36.67
25.904
5.144
5.726
B
O
HOH
77
HETATM
F
O
HOH
3
1.00
1
O
30.82
14.533
4.396
-6.613
B
O
HOH
78
HETATM
F
O
HOH
3
1.00
1
O
62.48
11.205
15.200
-19.632
B
O
HOH
79
HETATM
F
O
HOH
3
1.00
1
O
16.52
20.368
9.459
2.446
B
O
HOH
80
HETATM
F
O
HOH
3
1.00
1
O
72.31
15.170
16.848
-14.292
B
O
HOH
82
HETATM
F
O
HOH
3
1.00
1
O
30.78
35.471
4.157
4.786
B
O
HOH
83
HETATM
F
O
HOH
3
1.00
1
O
31.50
26.792
7.978
0.550
B
O
HOH
84
HETATM
F
O
HOH
3
1.00
1
O
18.08
23.738
3.965
-2.462
B
O
HOH
88
HETATM
F
O
HOH
3
1.00
1
O
36.39
32.862
1.612
2.158
B
O
HOH
89
HETATM
F
O
HOH
3
1.00
1
O
45.88
27.106
6.209
8.364
B
O
HOH
91
HETATM
F
O
HOH
3
1.00
1
O
51.23
16.658
6.781
-23.874
B
O
HOH
95
HETATM
F
O
HOH
3
1.00
1
O
31.99
34.010
8.699
0.656
B
O
HOH
96
HETATM
F
O
HOH
3
1.00
1
O
62.25
16.253
0.860
-5.493
B
O
HOH
101
HETATM
F
O
HOH
3
1.00
1
O
30.20
19.759
3.175
-5.367
B
O
HOH
104
HETATM
F
O
HOH
3
1.00
1
O
51.88
12.344
6.048
-7.804
B
O
HOH
107
HETATM
F
O
HOH
3
1.00
1
O
48.65
22.079
14.302
-23.116
B
O
HOH
108
HETATM
F
O
HOH
3
1.00
1
O
36.21
14.130
0.429
-1.949
B
O
HOH
111
HETATM
F
O
HOH
3
1.00
1
O
0.027640
0.000000
0.000000
0.000000
0.027488
0.000000
0.000000
0.000000
0.015843
0.00000
0.00000
0.00000
Kondo, J.
Umeda, S.
Sunami, T.
Takenaka, A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
16
90.00
90.00
90.00
36.180
36.380
63.120
C9 H13 I N3 O7 P
433.094
n
5-IODO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
H2 O
18.015
WATER
non-polymer
K 1
39.098
POTASSIUM ION
non-polymer
N
1
N
O
N
2
N
P
N
3
N
O
N
4
N
O
N
5
N
O
N
6
N
C
N
7
R
C
N
8
N
O
N
9
S
C
N
10
N
O
N
11
N
C
N
12
R
C
N
13
N
N
N
14
N
C
N
15
N
O
N
16
N
N
N
17
N
C
N
18
N
N
N
19
N
C
N
20
N
C
N
21
N
I
N
22
N
H
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
O
N
36
N
P
N
37
N
O
N
38
N
O
N
39
N
O
N
40
N
C
N
41
R
C
N
42
N
O
N
43
S
C
N
44
N
O
N
45
N
C
N
46
R
C
Y
47
N
N
Y
48
N
C
Y
49
N
N
Y
50
N
C
Y
51
N
C
N
52
N
N
Y
53
N
N
Y
54
N
C
Y
55
N
N
Y
56
N
C
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
O
N
72
N
P
N
73
N
O
N
74
N
O
N
75
N
O
N
76
N
C
N
77
R
C
N
78
N
O
N
79
S
C
N
80
N
O
N
81
N
C
N
82
R
C
N
83
N
N
N
84
N
C
N
85
N
O
N
86
N
N
N
87
N
C
N
88
N
N
N
89
N
C
N
90
N
C
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
O
N
106
N
P
N
107
N
O
N
108
N
O
N
109
N
O
N
110
N
C
N
111
R
C
N
112
N
O
N
113
S
C
N
114
N
O
N
115
N
C
N
116
R
C
Y
117
N
N
Y
118
N
C
Y
119
N
N
Y
120
N
C
N
121
N
C
N
122
N
O
N
123
N
N
N
124
N
C
N
125
N
N
N
126
N
N
Y
127
N
C
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
O
N
143
N
H
N
144
N
H
N
145
N
K
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
doub
N
27
N
sing
N
28
N
doub
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
doub
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
Y
59
N
sing
Y
60
N
sing
Y
61
N
doub
N
62
N
sing
Y
63
N
sing
Y
64
N
sing
Y
65
N
doub
N
66
N
sing
Y
67
N
doub
N
68
N
sing
N
69
N
sing
Y
70
N
sing
Y
71
N
doub
N
72
N
sing
Y
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
doub
N
100
N
sing
N
101
N
doub
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
doub
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
doub
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
Y
132
N
sing
Y
133
N
sing
Y
134
N
doub
N
135
N
sing
Y
136
N
sing
N
137
N
sing
Y
138
N
doub
N
139
N
doub
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
doub
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
UK
Nucleic Acids Res.
NARHAD
0389
0305-1048
32
2541
2549
10.1093/nar/gkh575
15133122
Crystal structures of a DNA octaplex with I-motif of G-quartets and its splitting into two quadruplexes suggest a folding mechanism of eight tandem repeats
2004
10.2210/pdb1v3p/pdb
pdb_00001v3p
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2000-11-11
ADSC QUANTUM 4
SINGLE WAVELENGTH
M
x-ray
1
1.0
1.0
BL-18B
Photon Factory
1.0
SYNCHROTRON
PHOTON FACTORY BEAMLINE BL-18B
2602.540
5'-D(*GP*(C38)P*GP*AP*GP*AP*GP*C)-3'
2
syn
polymer
39.098
POTASSIUM ION
2
syn
non-polymer
18.015
water
97
nat
water
no
yes
(DG)(C38)(DG)(DA)(DG)(DA)(DG)(DC)
GCGAGAGC
A,B
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
1
1.91
35.70
VAPOR DIFFUSION, HANGING DROP
7.0
2-methyl-2,4-pentanediol, spermine tetrahydrochloride, sodium chloride, potassium chloride, sodium cacodylate , pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
277
2-methyl-2,4-pentanediol
1
spermine tetrahydrochloride
1
sodium chloride
1
potassium chloride
1
sodium cacodylate
1
sodium chloride
2
potassium chloride
2
sodium cacodylate
2
-10.542
1
19
A
1
B
16
0.255
A_DG1:DC16_B
1
3.740
-0.473
-0.317
0.035
16.170
1
19
A
2
B
15
3.599
A_C382:DG15_B
2
3.583
0.511
0.050
-0.091
26.533
9
11
A
3
B
14
7.540
A_DG3:DA14_B
3
-22.600
6.418
1.476
-4.642
-25.910
9
11
A
6
B
11
16.130
A_DA6:DG11_B
4
-22.469
-6.137
1.547
-4.029
-16.031
1
19
A
7
B
10
-0.066
A_DG7:C3810_B
5
4.366
-0.298
0.080
-0.212
-0.182
1
19
A
8
B
9
-0.846
A_DC8:DG9_B
6
2.943
0.012
0.045
-0.288
2.771
30.814
A
A
1
2
0.265
B
B
16
15
2.793
0.141
0.568
-0.153
AA_DG1C382:DG15DC16_BB
1
-1.065
2.004
30.796
-0.312
-1.245
3.413
51.753
A
A
2
3
10.698
B
B
15
14
3.217
9.294
0.440
1.409
AA_C382DG3:DA14DG15_BB
2
0.790
-0.909
50.962
0.973
-0.449
3.548
58.087
A
A
6
7
5.958
B
B
11
10
3.379
5.776
-0.645
1.782
AA_DA6DG7:C3810DG11_BB
3
-2.366
2.441
57.779
1.511
0.531
3.078
28.729
A
A
7
8
1.211
B
B
10
9
3.072
0.601
-0.216
0.203
AA_DG7DC8:DG9C3810_BB
4
-0.365
0.736
28.721
0.282
0.357
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Refinement description
1
0
2004-06-08
1
1
2008-04-27
1
2
2011-07-13
1
3
2023-10-25
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_struct_conn.conn_type_id
_struct_conn.id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_symmetry
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
The same structure, Br-derivative
The same structure, I-derivative
PDBJ
Y
PDBJ
2003-11-03
REL
K
POTASSIUM ION
HOH
water
1V3N
PDB ENTRY 1V3N
PDB
experimental model
K
114
2
K
K
114
A
K
115
2
K
K
115
B
HOH
17
3
HOH
HOH
17
A
HOH
19
3
HOH
HOH
19
A
HOH
21
3
HOH
HOH
21
A
HOH
23
3
HOH
HOH
23
A
HOH
24
3
HOH
HOH
24
A
HOH
25
3
HOH
HOH
25
A
HOH
26
3
HOH
HOH
26
A
HOH
28
3
HOH
HOH
28
A
HOH
29
3
HOH
HOH
29
A
HOH
31
3
HOH
HOH
31
A
HOH
33
3
HOH
HOH
33
A
HOH
35
3
HOH
HOH
35
A
HOH
37
3
HOH
HOH
37
A
HOH
38
3
HOH
HOH
38
A
HOH
42
3
HOH
HOH
42
A
HOH
44
3
HOH
HOH
44
A
HOH
46
3
HOH
HOH
46
A
HOH
47
3
HOH
HOH
47
A
HOH
49
3
HOH
HOH
49
A
HOH
51
3
HOH
HOH
51
A
HOH
53
3
HOH
HOH
53
A
HOH
55
3
HOH
HOH
55
A
HOH
58
3
HOH
HOH
58
A
HOH
61
3
HOH
HOH
61
A
HOH
63
3
HOH
HOH
63
A
HOH
64
3
HOH
HOH
64
A
HOH
66
3
HOH
HOH
66
A
HOH
67
3
HOH
HOH
67
A
HOH
71
3
HOH
HOH
71
A
HOH
76
3
HOH
HOH
76
A
HOH
81
3
HOH
HOH
81
A
HOH
85
3
HOH
HOH
85
A
HOH
86
3
HOH
HOH
86
A
HOH
87
3
HOH
HOH
87
A
HOH
90
3
HOH
HOH
90
A
HOH
92
3
HOH
HOH
92
A
HOH
93
3
HOH
HOH
93
A
HOH
94
3
HOH
HOH
94
A
HOH
97
3
HOH
HOH
97
A
HOH
98
3
HOH
HOH
98
A
HOH
99
3
HOH
HOH
99
A
HOH
100
3
HOH
HOH
100
A
HOH
102
3
HOH
HOH
102
A
HOH
103
3
HOH
HOH
103
A
HOH
105
3
HOH
HOH
105
A
HOH
106
3
HOH
HOH
106
A
HOH
109
3
HOH
HOH
109
A
HOH
110
3
HOH
HOH
110
A
HOH
112
3
HOH
HOH
112
A
HOH
113
3
HOH
HOH
113
A
HOH
18
3
HOH
HOH
18
B
HOH
20
3
HOH
HOH
20
B
HOH
22
3
HOH
HOH
22
B
HOH
27
3
HOH
HOH
27
B
HOH
30
3
HOH
HOH
30
B
HOH
32
3
HOH
HOH
32
B
HOH
34
3
HOH
HOH
34
B
HOH
36
3
HOH
HOH
36
B
HOH
39
3
HOH
HOH
39
B
HOH
40
3
HOH
HOH
40
B
HOH
41
3
HOH
HOH
41
B
HOH
43
3
HOH
HOH
43
B
HOH
45
3
HOH
HOH
45
B
HOH
48
3
HOH
HOH
48
B
HOH
50
3
HOH
HOH
50
B
HOH
52
3
HOH
HOH
52
B
HOH
54
3
HOH
HOH
54
B
HOH
56
3
HOH
HOH
56
B
HOH
57
3
HOH
HOH
57
B
HOH
59
3
HOH
HOH
59
B
HOH
60
3
HOH
HOH
60
B
HOH
62
3
HOH
HOH
62
B
HOH
65
3
HOH
HOH
65
B
HOH
68
3
HOH
HOH
68
B
HOH
69
3
HOH
HOH
69
B
HOH
70
3
HOH
HOH
70
B
HOH
72
3
HOH
HOH
72
B
HOH
73
3
HOH
HOH
73
B
HOH
74
3
HOH
HOH
74
B
HOH
75
3
HOH
HOH
75
B
HOH
77
3
HOH
HOH
77
B
HOH
78
3
HOH
HOH
78
B
HOH
79
3
HOH
HOH
79
B
HOH
80
3
HOH
HOH
80
B
HOH
82
3
HOH
HOH
82
B
HOH
83
3
HOH
HOH
83
B
HOH
84
3
HOH
HOH
84
B
HOH
88
3
HOH
HOH
88
B
HOH
89
3
HOH
HOH
89
B
HOH
91
3
HOH
HOH
91
B
HOH
95
3
HOH
HOH
95
B
HOH
96
3
HOH
HOH
96
B
HOH
101
3
HOH
HOH
101
B
HOH
104
3
HOH
HOH
104
B
HOH
107
3
HOH
HOH
107
B
HOH
108
3
HOH
HOH
108
B
HOH
111
3
HOH
HOH
111
B
G
1
n
1
DG
1
A
CID
2
n
2
C38
2
A
G
3
n
3
DG
3
A
A
4
n
4
DA
4
A
G
5
n
5
DG
5
A
A
6
n
6
DA
6
A
G
7
n
7
DG
7
A
C
8
n
8
DC
8
A
G
9
n
1
DG
9
B
CID
10
n
2
C38
10
B
G
11
n
3
DG
11
B
A
12
n
4
DA
12
B
G
13
n
5
DG
13
B
A
14
n
6
DA
14
B
G
15
n
7
DG
15
B
C
16
n
8
DC
16
B
author_defined_assembly
8
octameric
A
DG
5
A
O6
DG
5
1_555
A
K
114
C
K
K
1_555
A
DG
5
A
O6
DG
5
3_655
122.2
A
DG
5
A
O6
DG
5
1_555
A
K
114
C
K
K
1_555
A
DG
5
A
O6
DG
5
2_665
111.0
A
DG
5
A
O6
DG
5
3_655
A
K
114
C
K
K
1_555
A
DG
5
A
O6
DG
5
2_665
96.3
A
DG
5
A
O6
DG
5
1_555
A
K
114
C
K
K
1_555
A
DG
5
A
O6
DG
5
4_565
96.3
A
DG
5
A
O6
DG
5
3_655
A
K
114
C
K
K
1_555
A
DG
5
A
O6
DG
5
4_565
111.0
A
DG
5
A
O6
DG
5
2_665
A
K
114
C
K
K
1_555
A
DG
5
A
O6
DG
5
4_565
122.2
A
DG
5
A
O6
DG
5
1_555
A
K
114
C
K
K
1_555
B
DG
13
B
O6
DG
5
1_555
73.8
A
DG
5
A
O6
DG
5
3_655
A
K
114
C
K
K
1_555
B
DG
13
B
O6
DG
5
1_555
67.6
A
DG
5
A
O6
DG
5
2_665
A
K
114
C
K
K
1_555
B
DG
13
B
O6
DG
5
1_555
162.1
A
DG
5
A
O6
DG
5
4_565
A
K
114
C
K
K
1_555
B
DG
13
B
O6
DG
5
1_555
73.0
A
DG
5
A
O6
DG
5
1_555
A
K
114
C
K
K
1_555
B
DG
13
B
O6
DG
5
3_655
67.6
A
DG
5
A
O6
DG
5
3_655
A
K
114
C
K
K
1_555
B
DG
13
B
O6
DG
5
3_655
73.8
A
DG
5
A
O6
DG
5
2_665
A
K
114
C
K
K
1_555
B
DG
13
B
O6
DG
5
3_655
73.0
A
DG
5
A
O6
DG
5
4_565
A
K
114
C
K
K
1_555
B
DG
13
B
O6
DG
5
3_655
162.1
B
DG
13
B
O6
DG
5
1_555
A
K
114
C
K
K
1_555
B
DG
13
B
O6
DG
5
3_655
94.1
A
DG
5
A
O6
DG
5
1_555
A
K
114
C
K
K
1_555
B
DG
13
B
O6
DG
5
4_565
73.0
A
DG
5
A
O6
DG
5
3_655
A
K
114
C
K
K
1_555
B
DG
13
B
O6
DG
5
4_565
162.1
A
DG
5
A
O6
DG
5
2_665
A
K
114
C
K
K
1_555
B
DG
13
B
O6
DG
5
4_565
67.6
A
DG
5
A
O6
DG
5
4_565
A
K
114
C
K
K
1_555
B
DG
13
B
O6
DG
5
4_565
73.8
B
DG
13
B
O6
DG
5
1_555
A
K
114
C
K
K
1_555
B
DG
13
B
O6
DG
5
4_565
129.3
B
DG
13
B
O6
DG
5
3_655
A
K
114
C
K
K
1_555
B
DG
13
B
O6
DG
5
4_565
107.2
A
DG
5
A
O6
DG
5
1_555
A
K
114
C
K
K
1_555
B
DG
13
B
O6
DG
5
2_665
162.1
A
DG
5
A
O6
DG
5
3_655
A
K
114
C
K
K
1_555
B
DG
13
B
O6
DG
5
2_665
73.0
A
DG
5
A
O6
DG
5
2_665
A
K
114
C
K
K
1_555
B
DG
13
B
O6
DG
5
2_665
73.8
A
DG
5
A
O6
DG
5
4_565
A
K
114
C
K
K
1_555
B
DG
13
B
O6
DG
5
2_665
67.6
B
DG
13
B
O6
DG
5
1_555
A
K
114
C
K
K
1_555
B
DG
13
B
O6
DG
5
2_665
107.2
B
DG
13
B
O6
DG
5
3_655
A
K
114
C
K
K
1_555
B
DG
13
B
O6
DG
5
2_665
129.3
B
DG
13
B
O6
DG
5
4_565
A
K
114
C
K
K
1_555
B
DG
13
B
O6
DG
5
2_665
94.1
A
DG
5
A
O6
DG
5
1_555
A
K
114
C
K
K
1_555
B
K
115
D
K
K
1_555
124.5
A
DG
5
A
O6
DG
5
3_655
A
K
114
C
K
K
1_555
B
K
115
D
K
K
1_555
55.5
A
DG
5
A
O6
DG
5
2_665
A
K
114
C
K
K
1_555
B
K
115
D
K
K
1_555
124.5
A
DG
5
A
O6
DG
5
4_565
A
K
114
C
K
K
1_555
B
K
115
D
K
K
1_555
55.5
B
DG
13
B
O6
DG
5
1_555
A
K
114
C
K
K
1_555
B
K
115
D
K
K
1_555
53.6
B
DG
13
B
O6
DG
5
3_655
A
K
114
C
K
K
1_555
B
K
115
D
K
K
1_555
126.4
B
DG
13
B
O6
DG
5
4_565
A
K
114
C
K
K
1_555
B
K
115
D
K
K
1_555
126.4
B
DG
13
B
O6
DG
5
2_665
A
K
114
C
K
K
1_555
B
K
115
D
K
K
1_555
53.6
A
DG
5
A
O6
DG
5
1_555
A
K
114
C
K
K
1_555
B
K
115
D
K
K
3_655
55.5
A
DG
5
A
O6
DG
5
3_655
A
K
114
C
K
K
1_555
B
K
115
D
K
K
3_655
124.5
A
DG
5
A
O6
DG
5
2_665
A
K
114
C
K
K
1_555
B
K
115
D
K
K
3_655
55.5
A
DG
5
A
O6
DG
5
4_565
A
K
114
C
K
K
1_555
B
K
115
D
K
K
3_655
124.5
B
DG
13
B
O6
DG
5
1_555
A
K
114
C
K
K
1_555
B
K
115
D
K
K
3_655
126.4
B
DG
13
B
O6
DG
5
3_655
A
K
114
C
K
K
1_555
B
K
115
D
K
K
3_655
53.6
B
DG
13
B
O6
DG
5
4_565
A
K
114
C
K
K
1_555
B
K
115
D
K
K
3_655
53.6
B
DG
13
B
O6
DG
5
2_665
A
K
114
C
K
K
1_555
B
K
115
D
K
K
3_655
126.4
B
K
115
D
K
K
1_555
A
K
114
C
K
K
1_555
B
K
115
D
K
K
3_655
180.0
A
DG
5
A
O6
DG
5
1_555
A
K
114
C
K
K
1_555
B
K
115
D
K
K
4_565
55.5
A
DG
5
A
O6
DG
5
3_655
A
K
114
C
K
K
1_555
B
K
115
D
K
K
4_565
124.5
A
DG
5
A
O6
DG
5
2_665
A
K
114
C
K
K
1_555
B
K
115
D
K
K
4_565
55.5
A
DG
5
A
O6
DG
5
4_565
A
K
114
C
K
K
1_555
B
K
115
D
K
K
4_565
124.5
B
DG
13
B
O6
DG
5
1_555
A
K
114
C
K
K
1_555
B
K
115
D
K
K
4_565
126.4
B
DG
13
B
O6
DG
5
3_655
A
K
114
C
K
K
1_555
B
K
115
D
K
K
4_565
53.6
B
DG
13
B
O6
DG
5
4_565
A
K
114
C
K
K
1_555
B
K
115
D
K
K
4_565
53.6
B
DG
13
B
O6
DG
5
2_665
A
K
114
C
K
K
1_555
B
K
115
D
K
K
4_565
126.4
B
K
115
D
K
K
1_555
A
K
114
C
K
K
1_555
B
K
115
D
K
K
4_565
180.0
B
K
115
D
K
K
3_655
A
K
114
C
K
K
1_555
B
K
115
D
K
K
4_565
0.0
A
DG
5
A
O6
DG
5
1_555
A
K
114
C
K
K
1_555
B
K
115
D
K
K
2_665
124.5
A
DG
5
A
O6
DG
5
3_655
A
K
114
C
K
K
1_555
B
K
115
D
K
K
2_665
55.5
A
DG
5
A
O6
DG
5
2_665
A
K
114
C
K
K
1_555
B
K
115
D
K
K
2_665
124.5
A
DG
5
A
O6
DG
5
4_565
A
K
114
C
K
K
1_555
B
K
115
D
K
K
2_665
55.5
B
DG
13
B
O6
DG
5
1_555
A
K
114
C
K
K
1_555
B
K
115
D
K
K
2_665
53.6
B
DG
13
B
O6
DG
5
3_655
A
K
114
C
K
K
1_555
B
K
115
D
K
K
2_665
126.4
B
DG
13
B
O6
DG
5
4_565
A
K
114
C
K
K
1_555
B
K
115
D
K
K
2_665
126.4
B
DG
13
B
O6
DG
5
2_665
A
K
114
C
K
K
1_555
B
K
115
D
K
K
2_665
53.6
B
K
115
D
K
K
1_555
A
K
114
C
K
K
1_555
B
K
115
D
K
K
2_665
0.0
B
K
115
D
K
K
3_655
A
K
114
C
K
K
1_555
B
K
115
D
K
K
2_665
180.0
B
K
115
D
K
K
4_565
A
K
114
C
K
K
1_555
B
K
115
D
K
K
2_665
180.0
A
DG
5
A
O6
DG
5
4_565
B
K
115
D
K
K
1_555
A
DG
5
A
O6
DG
5
3_655
100.2
A
DG
5
A
O6
DG
5
4_565
B
K
115
D
K
K
1_555
A
HOH
49
E
O
HOH
1_555
80.8
A
DG
5
A
O6
DG
5
3_655
B
K
115
D
K
K
1_555
A
HOH
49
E
O
HOH
1_555
173.7
A
DG
5
A
O6
DG
5
4_565
B
K
115
D
K
K
1_555
A
HOH
49
E
O
HOH
2_665
173.7
A
DG
5
A
O6
DG
5
3_655
B
K
115
D
K
K
1_555
A
HOH
49
E
O
HOH
2_665
80.8
A
HOH
49
E
O
HOH
1_555
B
K
115
D
K
K
1_555
A
HOH
49
E
O
HOH
2_665
98.8
A
DG
5
A
O6
DG
5
4_565
B
K
115
D
K
K
1_555
B
DG
13
B
O6
DG
5
1_555
68.3
A
DG
5
A
O6
DG
5
3_655
B
K
115
D
K
K
1_555
B
DG
13
B
O6
DG
5
1_555
63.4
A
HOH
49
E
O
HOH
1_555
B
K
115
D
K
K
1_555
B
DG
13
B
O6
DG
5
1_555
111.7
A
HOH
49
E
O
HOH
2_665
B
K
115
D
K
K
1_555
B
DG
13
B
O6
DG
5
1_555
117.4
A
DG
5
A
O6
DG
5
4_565
B
K
115
D
K
K
1_555
B
DG
13
B
O6
DG
5
2_665
63.4
A
DG
5
A
O6
DG
5
3_655
B
K
115
D
K
K
1_555
B
DG
13
B
O6
DG
5
2_665
68.3
A
HOH
49
E
O
HOH
1_555
B
K
115
D
K
K
1_555
B
DG
13
B
O6
DG
5
2_665
117.4
A
HOH
49
E
O
HOH
2_665
B
K
115
D
K
K
1_555
B
DG
13
B
O6
DG
5
2_665
111.7
B
DG
13
B
O6
DG
5
1_555
B
K
115
D
K
K
1_555
B
DG
13
B
O6
DG
5
2_665
100.8
A
C38
2
A
C38
2
DC
B
C38
10
B
C38
2
DC
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_665
-x+1,-y+1,z
crystal symmetry operation
36.1800000000
36.3800000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
3_655
-x+1,y,-z
crystal symmetry operation
36.1800000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
4_565
x,-y+1,-z
crystal symmetry operation
0.0000000000
36.3800000000
0.0000000000
1
A
K
114
C
K
1
B
K
115
D
K
1
A
HOH
17
E
HOH
1
A
HOH
64
E
HOH
1
B
HOH
75
F
HOH
0.265
0.234
2.3
9.0
174
1972
1903
RANDOM
1
3.0
MOLECULAR REPLACEMENT
PDB ENTRY 1V3N
G. PARKINSON ET AL., (1996) ACTACRYST. D52, 57-64
0.31
5.0
0.29
2.3
9.0
97
431
2
332
0
0.005
0.9
20.8
0.8
0.368
0.37
2.38
14
87.1
2.3
20
1V3P
2014
1980
0.0
0.0
0.084
1
7.1
98.4
0.24
2.3
2.38
2.4
199
99.0
data collection
CrystalClear
data scaling
SCALA
phasing
AMoRE
refinement
CNS
1.0
data reduction
CrystalClear
(MSC/RIGAKU)
data scaling
CCP4
(SCALA)
Crystal structure of d(GCGAGAGC): the DNA octaplex structure with I-motif of G-quartet
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
The biological assembly is an octaplex generated from the duplex in the asymmetric unit by the operations: (x, y, z), (1-x, 1-y, z), (x,1-y,2-z) and (1-x, y, 2-z).
covale
1.605
both
A
DG
1
A
O3'
DG
1
1_555
A
C38
2
A
P
C38
2
1_555
covale
1.603
one
A
C38
2
A
O3'
C38
2
1_555
A
DG
3
A
P
DG
3
1_555
covale
1.604
both
B
DG
9
B
O3'
DG
1
1_555
B
C38
10
B
P
C38
2
1_555
covale
1.602
one
B
C38
10
B
O3'
C38
2
1_555
B
DG
11
B
P
DG
3
1_555
metalc
2.689
A
DG
5
A
O6
DG
5
1_555
A
K
114
C
K
K
1_555
metalc
2.689
A
DG
5
A
O6
DG
5
3_655
A
K
114
C
K
K
1_555
metalc
2.689
A
DG
5
A
O6
DG
5
2_665
A
K
114
C
K
K
1_555
metalc
2.689
A
DG
5
A
O6
DG
5
4_565
A
K
114
C
K
K
1_555
metalc
2.887
A
DG
5
A
O6
DG
5
4_565
B
K
115
D
K
K
1_555
metalc
2.887
A
DG
5
A
O6
DG
5
3_655
B
K
115
D
K
K
1_555
metalc
2.675
A
HOH
49
E
O
HOH
1_555
B
K
115
D
K
K
1_555
metalc
2.675
A
HOH
49
E
O
HOH
2_665
B
K
115
D
K
K
1_555
metalc
2.680
A
K
114
C
K
K
1_555
B
DG
13
B
O6
DG
5
1_555
metalc
2.680
A
K
114
C
K
K
1_555
B
DG
13
B
O6
DG
5
3_655
metalc
2.680
A
K
114
C
K
K
1_555
B
DG
13
B
O6
DG
5
4_565
metalc
2.680
A
K
114
C
K
K
1_555
B
DG
13
B
O6
DG
5
2_665
metalc
3.375
A
K
114
C
K
K
1_555
B
K
115
D
K
K
1_555
metalc
3.375
A
K
114
C
K
K
1_555
B
K
115
D
K
K
3_655
metalc
3.375
A
K
114
C
K
K
1_555
B
K
115
D
K
K
4_565
metalc
3.375
A
K
114
C
K
K
1_555
B
K
115
D
K
K
2_665
metalc
2.799
B
DG
13
B
O6
DG
5
1_555
B
K
115
D
K
K
1_555
metalc
2.799
B
DG
13
B
O6
DG
5
2_665
B
K
115
D
K
K
1_555
hydrog
WATSON-CRICK
A
DG
1
A
N1
DG
1
1_555
B
DC
16
B
N3
DC
8
1_555
hydrog
WATSON-CRICK
A
DG
1
A
N2
DG
1
1_555
B
DC
16
B
O2
DC
8
1_555
hydrog
WATSON-CRICK
A
DG
1
A
O6
DG
1
1_555
B
DC
16
B
N4
DC
8
1_555
hydrog
WATSON-CRICK
A
C38
2
A
N3
C38
2
1_555
B
DG
15
B
N1
DG
7
1_555
hydrog
WATSON-CRICK
A
C38
2
A
N4
C38
2
1_555
B
DG
15
B
O6
DG
7
1_555
hydrog
WATSON-CRICK
A
C38
2
A
O2
C38
2
1_555
B
DG
15
B
N2
DG
7
1_555
hydrog
TYPE_11_PAIR
A
DG
3
A
N2
DG
3
1_555
B
DA
14
B
N7
DA
6
1_555
hydrog
TYPE_11_PAIR
A
DG
3
A
N3
DG
3
1_555
B
DA
14
B
N6
DA
6
1_555
hydrog
TYPE_11_PAIR
A
DA
6
A
N6
DA
6
1_555
B
DG
11
B
N3
DG
3
1_555
hydrog
TYPE_11_PAIR
A
DA
6
A
N7
DA
6
1_555
B
DG
11
B
N2
DG
3
1_555
hydrog
WATSON-CRICK
A
DG
7
A
N1
DG
7
1_555
B
C38
10
B
N3
C38
2
1_555
hydrog
WATSON-CRICK
A
DG
7
A
N2
DG
7
1_555
B
C38
10
B
O2
C38
2
1_555
hydrog
WATSON-CRICK
A
DG
7
A
O6
DG
7
1_555
B
C38
10
B
N4
C38
2
1_555
hydrog
WATSON-CRICK
A
DC
8
A
N3
DC
8
1_555
B
DG
9
B
N1
DG
1
1_555
hydrog
WATSON-CRICK
A
DC
8
A
N4
DC
8
1_555
B
DG
9
B
O6
DG
1
1_555
hydrog
WATSON-CRICK
A
DC
8
A
O2
DC
8
1_555
B
DG
9
B
N2
DG
1
1_555
DNA
octaplex, quadruplex, G-quartet, I-motif, I-motif of G-quartet, base-intercalated duplex, base-intercalated motif, sheared G:A pair, DNA, deoxyribonucleic acid, X-ray analysis
1V3P
PDB
1
1V3P
1
8
1V3P
1
8
1V3P
A
1
1
8
9
16
1V3P
9
16
1V3P
B
1
1
8
BINDING SITE FOR RESIDUE K A 114
A
K
114
Software
12
BINDING SITE FOR RESIDUE K B 115
B
K
115
Software
10
A
DG
5
A
DG
5
12
3_655
A
DG
5
A
DG
5
12
2_665
A
DG
5
A
DG
5
12
4_565
A
DG
5
A
DG
5
12
1_555
B
DG
13
B
DG
5
12
4_565
B
DG
13
B
DG
5
12
3_655
B
DG
13
B
DG
5
12
2_665
B
DG
13
B
DG
5
12
1_555
B
K
115
D
K
12
2_665
B
K
115
D
K
12
1_555
B
K
115
D
K
12
4_565
B
K
115
D
K
12
3_655
A
DG
5
A
DG
5
10
3_655
A
DG
5
A
DG
5
10
4_565
A
HOH
49
E
HOH
10
1_555
A
HOH
49
E
HOH
10
2_665
A
K
114
C
K
10
3_655
A
K
114
C
K
10
2_665
A
K
114
C
K
10
4_565
A
K
114
C
K
10
1_555
B
DG
13
B
DG
5
10
1_555
B
DG
13
B
DG
5
10
2_665
23
I 2 2 2