1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Tochio, N.
Koshiba, S.
Inoue, M.
Kigawa, T.
Yokoyama, S.
RIKEN Structural Genomics/Proteomics Initiative (RSGI)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
N
N
159
S
C
N
160
N
C
N
161
N
O
N
162
S
C
N
163
N
C
N
164
N
C
N
165
N
C
N
166
N
O
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
N
N
181
S
C
N
182
N
C
N
183
N
O
N
184
N
C
N
185
N
C
N
186
N
C
N
187
N
C
N
188
N
O
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
N
N
203
S
C
N
204
N
C
N
205
N
O
N
206
N
C
N
207
N
C
N
208
N
C
N
209
N
C
N
210
N
N
N
211
N
O
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
N
N
228
S
C
N
229
N
C
N
230
N
O
N
231
N
C
N
232
N
C
N
233
N
S
N
234
N
C
N
235
N
O
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
N
N
248
S
C
N
249
N
C
N
250
N
O
N
251
N
C
Y
252
N
C
Y
253
N
C
Y
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
N
258
N
O
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
N
N
271
S
C
N
272
N
C
N
273
N
O
N
274
N
C
N
275
N
C
N
276
N
C
N
277
N
O
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
N
C
N
292
N
O
N
293
N
O
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
N
N
302
S
C
N
303
N
C
N
304
N
O
N
305
R
C
N
306
N
O
N
307
N
C
N
308
N
O
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
N
N
319
S
C
N
320
N
C
N
321
N
O
N
322
N
C
Y
323
N
C
Y
324
N
C
Y
325
N
C
Y
326
N
N
Y
327
N
C
Y
328
N
C
Y
329
N
C
Y
330
N
C
Y
331
N
C
N
332
N
O
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
N
N
346
S
C
N
347
N
C
N
348
N
O
N
349
N
C
Y
350
N
C
Y
351
N
C
Y
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
N
356
N
O
N
357
N
O
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
N
N
370
S
C
N
371
N
C
N
372
N
O
N
373
N
C
N
374
N
C
N
375
N
C
N
376
N
O
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
doub
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
doub
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
doub
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
doub
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
Y
246
N
doub
Y
247
N
sing
Y
248
N
sing
N
249
N
sing
Y
250
N
doub
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
doub
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
doub
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
doub
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
doub
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
Y
315
N
doub
Y
316
N
sing
Y
317
N
sing
N
318
N
sing
Y
319
N
doub
Y
320
N
sing
Y
321
N
sing
N
322
N
sing
Y
323
N
sing
Y
324
N
doub
N
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
doub
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
Y
343
N
doub
Y
344
N
sing
Y
345
N
sing
N
346
N
sing
Y
347
N
doub
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
doub
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
To be Published
0353
Solution structure of PDZ domain of mouse Alpha-actinin-2 associated LIM protein
10.2210/pdb1v5l/pdb
pdb_00001v5l
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
1
1.0
10578.838
PDZ and LIM domain 3; actinin alpha 2 associated LIM protein
PDZ domain
1
man
polymer
no
no
GSSGSSGNVVLPGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQL
CLKIDRAETRLWSPQVSSGPSSG
GSSGSSGNVVLPGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQL
CLKIDRAETRLWSPQVSSGPSSG
A
mmt007020726.1
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
house mouse
Mus
sample
Cell-free protein synthesis
RIKEN cDNA 6720456D19
10090
Mus musculus
PLASMID
P030506-95
RIKEN Structural Genomics/Proteomics Initiative
RSGI
database_2
pdbx_nmr_software
pdbx_nmr_spectrometer
pdbx_struct_assembly
pdbx_struct_oper_list
struct_ref_seq_dif
chem_comp_atom
chem_comp_bond
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Data collection
1
0
2004-05-25
1
1
2008-04-27
1
2
2011-07-13
1
3
2022-03-02
1
4
2023-12-27
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
_pdbx_nmr_spectrometer.model
_struct_ref_seq_dif.details
Y
PDBJ
Y
PDBJ
2003-11-25
REL
REL
structures with the least restraint violations, target function
100
20
3D_13C-separated_NOESY
3D_15N-separated_NOESY
120mM
6.0
ambient
298
K
torsion angle dynamics
1
lowest energy
1.1mM PDZ domain U-15N, 13C; 20mM phosphate buffer NA; 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 10% D2O
90% H2O/10% D2O
Bruker
collection
XwinNMR
2.6
JEOL
collection
Delta
4.2
Delaglio, F.
processing
NMRPipe
20020425
Johnson, B.A.
data analysis
NMRView
5.0.4
Kobayashi, N.
data analysis
KUJIRA
0.853
Guentert, P.
structure solution
CYANA
2.0.17
Guentert, P.
refinement
CYANA
2.0.17
920
JEOL
ECA
800
Bruker
AVANCE
GLY
1
n
1
GLY
1
A
SER
2
n
2
SER
2
A
SER
3
n
3
SER
3
A
GLY
4
n
4
GLY
4
A
SER
5
n
5
SER
5
A
SER
6
n
6
SER
6
A
GLY
7
n
7
GLY
7
A
ASN
8
n
8
ASN
8
A
VAL
9
n
9
VAL
9
A
VAL
10
n
10
VAL
10
A
LEU
11
n
11
LEU
11
A
PRO
12
n
12
PRO
12
A
GLY
13
n
13
GLY
13
A
PRO
14
n
14
PRO
14
A
ALA
15
n
15
ALA
15
A
PRO
16
n
16
PRO
16
A
TRP
17
n
17
TRP
17
A
GLY
18
n
18
GLY
18
A
PHE
19
n
19
PHE
19
A
ARG
20
n
20
ARG
20
A
LEU
21
n
21
LEU
21
A
SER
22
n
22
SER
22
A
GLY
23
n
23
GLY
23
A
GLY
24
n
24
GLY
24
A
ILE
25
n
25
ILE
25
A
ASP
26
n
26
ASP
26
A
PHE
27
n
27
PHE
27
A
ASN
28
n
28
ASN
28
A
GLN
29
n
29
GLN
29
A
PRO
30
n
30
PRO
30
A
LEU
31
n
31
LEU
31
A
VAL
32
n
32
VAL
32
A
ILE
33
n
33
ILE
33
A
THR
34
n
34
THR
34
A
ARG
35
n
35
ARG
35
A
ILE
36
n
36
ILE
36
A
THR
37
n
37
THR
37
A
PRO
38
n
38
PRO
38
A
GLY
39
n
39
GLY
39
A
SER
40
n
40
SER
40
A
LYS
41
n
41
LYS
41
A
ALA
42
n
42
ALA
42
A
ALA
43
n
43
ALA
43
A
ALA
44
n
44
ALA
44
A
ALA
45
n
45
ALA
45
A
ASN
46
n
46
ASN
46
A
LEU
47
n
47
LEU
47
A
CYS
48
n
48
CYS
48
A
PRO
49
n
49
PRO
49
A
GLY
50
n
50
GLY
50
A
ASP
51
n
51
ASP
51
A
VAL
52
n
52
VAL
52
A
ILE
53
n
53
ILE
53
A
LEU
54
n
54
LEU
54
A
ALA
55
n
55
ALA
55
A
ILE
56
n
56
ILE
56
A
ASP
57
n
57
ASP
57
A
GLY
58
n
58
GLY
58
A
PHE
59
n
59
PHE
59
A
GLY
60
n
60
GLY
60
A
THR
61
n
61
THR
61
A
GLU
62
n
62
GLU
62
A
SER
63
n
63
SER
63
A
MET
64
n
64
MET
64
A
THR
65
n
65
THR
65
A
HIS
66
n
66
HIS
66
A
ALA
67
n
67
ALA
67
A
ASP
68
n
68
ASP
68
A
ALA
69
n
69
ALA
69
A
GLN
70
n
70
GLN
70
A
ASP
71
n
71
ASP
71
A
ARG
72
n
72
ARG
72
A
ILE
73
n
73
ILE
73
A
LYS
74
n
74
LYS
74
A
ALA
75
n
75
ALA
75
A
ALA
76
n
76
ALA
76
A
SER
77
n
77
SER
77
A
TYR
78
n
78
TYR
78
A
GLN
79
n
79
GLN
79
A
LEU
80
n
80
LEU
80
A
CYS
81
n
81
CYS
81
A
LEU
82
n
82
LEU
82
A
LYS
83
n
83
LYS
83
A
ILE
84
n
84
ILE
84
A
ASP
85
n
85
ASP
85
A
ARG
86
n
86
ARG
86
A
ALA
87
n
87
ALA
87
A
GLU
88
n
88
GLU
88
A
THR
89
n
89
THR
89
A
ARG
90
n
90
ARG
90
A
LEU
91
n
91
LEU
91
A
TRP
92
n
92
TRP
92
A
SER
93
n
93
SER
93
A
PRO
94
n
94
PRO
94
A
GLN
95
n
95
GLN
95
A
VAL
96
n
96
VAL
96
A
SER
97
n
97
SER
97
A
SER
98
n
98
SER
98
A
GLY
99
n
99
GLY
99
A
PRO
100
n
100
PRO
100
A
SER
101
n
101
SER
101
A
SER
102
n
102
SER
102
A
GLY
103
n
103
GLY
103
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LEU
11
A
N
LEU
11
A
O
LEU
80
A
O
LEU
80
A
N
GLY
24
A
N
GLY
24
A
O
GLN
29
A
O
GLN
29
A
O
PHE
59
A
O
PHE
59
A
N
ILE
56
A
N
ILE
56
A
N
ALA
55
A
N
ALA
55
A
O
LYS
83
A
O
LYS
83
1
A
PRO
14
-69.77
-170.78
1
A
ALA
42
-74.76
-71.40
1
A
THR
61
-101.73
44.25
1
A
ALA
76
-67.96
-175.07
1
A
ALA
87
-117.92
76.96
1
A
THR
89
-81.58
39.62
1
A
ARG
90
-77.59
47.56
1
A
VAL
96
-171.78
142.52
1
A
SER
97
-35.24
107.31
1
A
SER
101
-172.95
115.03
2
A
SER
2
-57.35
173.10
2
A
SER
5
-101.24
78.47
2
A
PRO
14
-69.80
-175.31
2
A
LEU
31
-68.39
97.48
2
A
ALA
42
-74.23
-71.99
2
A
PRO
49
-69.70
98.21
2
A
THR
61
-93.06
39.83
2
A
ALA
76
-53.29
-178.69
2
A
ASP
85
-94.90
35.17
2
A
ARG
86
36.23
32.93
2
A
TRP
92
-165.32
107.42
2
A
PRO
94
-69.68
-169.84
2
A
GLN
95
-106.72
50.02
3
A
SER
6
-173.07
129.60
3
A
PRO
14
-69.77
-179.48
3
A
PRO
16
-69.80
-179.88
3
A
PRO
38
-69.76
92.16
3
A
ALA
42
-74.79
-73.14
3
A
THR
61
-87.67
38.41
3
A
ALA
76
-56.83
-176.29
3
A
TYR
78
-39.31
-29.05
3
A
LEU
91
-112.85
-71.55
3
A
SER
93
-174.39
142.56
3
A
PRO
94
-69.73
-165.32
4
A
PRO
14
-69.81
-172.30
4
A
ALA
42
-82.55
-72.92
4
A
PRO
49
-69.75
96.96
4
A
ASP
57
39.77
32.31
4
A
THR
61
-89.20
35.09
4
A
ALA
76
-54.12
-174.62
4
A
TYR
78
-38.43
-27.91
4
A
ALA
87
-48.00
105.43
4
A
PRO
94
-69.77
-168.49
4
A
SER
98
34.37
52.85
4
A
SER
101
-48.96
153.96
5
A
PRO
14
-69.84
-171.98
5
A
ALA
42
-80.41
-73.36
5
A
PRO
49
-69.75
99.18
5
A
THR
61
-83.73
34.95
5
A
ALA
76
-52.95
-179.04
5
A
TRP
92
-53.68
86.92
5
A
PRO
94
-69.74
-173.13
5
A
GLN
95
-91.93
52.83
6
A
ALA
15
-47.03
167.56
6
A
PRO
38
-69.78
93.47
6
A
PRO
49
-69.85
88.06
6
A
THR
61
-97.28
35.33
6
A
ALA
76
-51.65
-175.15
6
A
TYR
78
-36.20
-35.19
6
A
LEU
91
-134.47
-44.75
6
A
SER
93
34.33
53.52
6
A
GLN
95
-88.68
35.75
6
A
VAL
96
-174.95
141.52
7
A
SER
2
-174.48
132.78
7
A
PRO
16
-69.75
-179.62
7
A
ALA
42
-75.19
-73.06
7
A
PRO
49
-69.80
91.29
7
A
ASP
57
34.33
42.89
7
A
THR
61
-92.36
39.85
7
A
ALA
76
-54.46
-176.31
7
A
TYR
78
-37.40
-35.85
7
A
ARG
86
36.15
49.66
7
A
ARG
90
31.64
49.52
7
A
SER
93
32.09
53.76
7
A
GLN
95
33.31
34.64
7
A
SER
97
-171.26
116.46
7
A
SER
101
36.01
45.34
8
A
PRO
14
-69.74
-169.73
8
A
ALA
42
-74.82
-73.14
8
A
PRO
49
-69.73
95.72
8
A
ALA
76
-60.53
-174.99
8
A
ARG
86
36.18
37.20
8
A
THR
89
-87.20
36.10
8
A
ARG
90
-60.84
75.88
8
A
TRP
92
-34.00
93.48
8
A
PRO
94
-69.82
-169.50
8
A
PRO
100
-69.78
88.44
8
A
SER
102
-69.74
88.09
9
A
PRO
14
-69.76
-169.99
9
A
ALA
42
-69.53
-73.13
9
A
PRO
49
-69.74
95.82
9
A
THR
61
-92.23
41.84
9
A
ALA
76
-49.02
178.13
9
A
ARG
86
73.46
40.64
9
A
LEU
91
-46.61
152.06
9
A
GLN
95
-57.88
98.47
10
A
SER
2
-49.82
151.57
10
A
ILE
25
-48.32
-19.05
10
A
PRO
49
-69.77
96.39
10
A
ASP
57
34.28
42.40
10
A
THR
61
-96.52
32.83
10
A
ALA
76
-52.97
-176.35
10
A
TYR
78
-39.68
-26.76
10
A
ASP
85
-92.88
31.33
10
A
ARG
86
34.26
51.88
10
A
ALA
87
-56.15
101.31
10
A
SER
93
-108.12
77.83
10
A
PRO
94
-69.78
-167.11
10
A
GLN
95
-37.22
139.62
10
A
VAL
96
-66.09
85.32
10
A
SER
97
35.46
54.16
11
A
PRO
14
-69.75
-167.40
11
A
ALA
42
-84.85
-71.20
11
A
PRO
49
-69.80
94.37
11
A
THR
61
-92.46
42.57
11
A
ALA
76
-62.58
-179.01
11
A
ARG
90
-39.62
-25.38
12
A
ALA
15
-47.66
167.80
12
A
PRO
38
-69.74
89.28
12
A
ALA
42
-74.77
-73.11
12
A
PRO
49
-69.77
98.37
12
A
THR
61
-96.05
39.75
12
A
ALA
76
-56.66
-174.87
12
A
TYR
78
-38.52
-29.24
12
A
ARG
86
74.92
52.99
12
A
LEU
91
-106.17
-65.06
12
A
SER
98
-46.85
160.53
12
A
SER
102
-105.99
42.26
13
A
PRO
14
-69.76
-173.78
13
A
PRO
38
-69.71
90.04
13
A
ALA
42
-77.96
-73.11
13
A
ASP
57
39.56
28.81
13
A
THR
61
-89.57
42.65
13
A
ALA
76
-58.94
178.46
13
A
ASP
85
-91.40
41.43
13
A
ARG
90
-45.25
101.41
13
A
PRO
94
-69.76
-167.08
13
A
VAL
96
-33.99
123.65
13
A
SER
102
-89.78
42.06
14
A
SER
5
-108.20
51.27
14
A
PRO
14
-69.78
-179.47
14
A
PRO
16
-69.78
-179.93
14
A
ILE
25
-48.53
-19.28
14
A
ALA
42
-74.66
-71.91
14
A
PRO
49
-69.79
91.78
14
A
THR
61
-96.87
36.08
14
A
ALA
76
-53.29
-174.95
14
A
TYR
78
-33.37
-35.15
14
A
ASP
85
-83.83
36.00
14
A
ARG
86
34.95
37.47
14
A
ARG
90
35.75
54.84
14
A
LEU
91
-134.57
-54.83
15
A
PRO
14
-69.77
-168.62
15
A
ALA
42
-75.21
-73.10
15
A
THR
61
-94.62
37.78
15
A
ALA
76
-53.26
-175.65
15
A
TYR
78
-38.13
-27.23
15
A
ARG
86
34.38
48.39
15
A
TRP
92
-35.58
95.94
15
A
SER
98
-46.46
103.70
15
A
PRO
100
-69.76
1.49
15
A
SER
101
-34.93
120.41
16
A
SER
5
-66.77
83.39
16
A
PRO
14
-69.76
-170.22
16
A
PRO
38
-69.72
97.76
16
A
ALA
42
-80.93
-73.06
16
A
ASN
46
70.46
35.25
16
A
PRO
49
-69.73
94.65
16
A
ASP
57
37.56
33.34
16
A
ALA
76
-66.66
-174.95
16
A
ASP
85
-86.92
32.76
16
A
ARG
86
35.41
32.42
16
A
ARG
90
33.98
45.65
16
A
SER
93
-118.40
74.73
16
A
GLN
95
-165.50
119.20
17
A
SER
6
-41.44
152.04
17
A
PRO
14
-69.80
-173.41
17
A
PRO
38
-69.79
96.85
17
A
ALA
42
-76.29
-72.93
17
A
ASP
57
36.06
33.79
17
A
ALA
76
-57.01
-175.81
17
A
TYR
78
-39.40
-25.79
17
A
THR
89
-93.00
31.13
17
A
ARG
90
-51.43
96.21
17
A
PRO
94
-69.73
-175.21
17
A
VAL
96
-34.91
111.87
17
A
SER
98
-48.05
105.26
18
A
SER
6
-34.27
122.18
18
A
PRO
14
-69.77
-171.78
18
A
PRO
38
-69.81
89.05
18
A
ALA
42
-81.88
-72.93
18
A
PRO
49
-69.75
97.05
18
A
ILE
53
-58.25
108.17
18
A
ASP
57
41.06
28.66
18
A
THR
61
-85.35
30.21
18
A
ALA
76
-54.47
-178.08
18
A
TYR
78
-38.43
-26.83
18
A
ASP
85
-92.56
40.93
18
A
ARG
86
29.81
43.44
18
A
ALA
87
-32.33
101.05
18
A
ARG
90
-40.68
98.60
18
A
LEU
91
-32.89
-38.94
18
A
SER
93
-174.78
119.98
18
A
SER
101
-39.44
103.57
19
A
SER
6
-34.47
125.20
19
A
PRO
14
-69.76
-169.25
19
A
ALA
42
-80.08
-72.67
19
A
THR
61
-87.19
31.94
19
A
ALA
76
-66.58
-174.66
19
A
ASP
85
-82.70
38.41
19
A
ARG
86
34.40
38.89
19
A
ALA
87
-54.06
94.19
19
A
SER
101
71.40
47.37
20
A
PRO
14
-69.76
-170.86
20
A
ALA
42
-84.75
-71.66
20
A
PRO
49
-69.76
95.22
20
A
ALA
76
-63.87
-175.99
20
A
TYR
78
-38.23
-27.34
20
A
ALA
87
-45.16
104.39
20
A
TRP
92
-50.83
92.86
20
A
VAL
96
-171.86
134.76
Solution structure of PDZ domain of mouse Alpha-actinin-2 associated LIM protein
1
N
N
A
ALA
42
A
ALA
42
HELX_P
A
ASN
46
A
ASN
46
5
1
5
A
THR
65
A
THR
65
HELX_P
A
LYS
74
A
LYS
74
1
2
10
STRUCTURAL PROTEIN
PDZ domain, cytoskeleton, actin binding, structural genomics, RIKEN Structural Genomics/Proteomics Initiative, RSGI, STRUCTURAL PROTEIN
A
GLY
13
A
GLY
13
1
A
PRO
14
A
PRO
14
0.08
A
ALA
15
A
ALA
15
1
A
PRO
16
A
PRO
16
0.05
A
GLY
13
A
GLY
13
2
A
PRO
14
A
PRO
14
0.05
A
ALA
15
A
ALA
15
2
A
PRO
16
A
PRO
16
-0.02
A
GLY
13
A
GLY
13
3
A
PRO
14
A
PRO
14
0.04
A
ALA
15
A
ALA
15
3
A
PRO
16
A
PRO
16
0.04
A
GLY
13
A
GLY
13
4
A
PRO
14
A
PRO
14
0.11
A
ALA
15
A
ALA
15
4
A
PRO
16
A
PRO
16
0.04
A
GLY
13
A
GLY
13
5
A
PRO
14
A
PRO
14
0.11
A
ALA
15
A
ALA
15
5
A
PRO
16
A
PRO
16
0.02
A
GLY
13
A
GLY
13
6
A
PRO
14
A
PRO
14
0.07
A
ALA
15
A
ALA
15
6
A
PRO
16
A
PRO
16
0.05
A
GLY
13
A
GLY
13
7
A
PRO
14
A
PRO
14
0.14
A
ALA
15
A
ALA
15
7
A
PRO
16
A
PRO
16
0.01
A
GLY
13
A
GLY
13
8
A
PRO
14
A
PRO
14
0.03
A
ALA
15
A
ALA
15
8
A
PRO
16
A
PRO
16
0.00
A
GLY
13
A
GLY
13
9
A
PRO
14
A
PRO
14
0.06
A
ALA
15
A
ALA
15
9
A
PRO
16
A
PRO
16
-0.07
A
GLY
13
A
GLY
13
10
A
PRO
14
A
PRO
14
0.02
A
ALA
15
A
ALA
15
10
A
PRO
16
A
PRO
16
-0.01
A
GLY
13
A
GLY
13
11
A
PRO
14
A
PRO
14
0.04
A
ALA
15
A
ALA
15
11
A
PRO
16
A
PRO
16
0.03
A
GLY
13
A
GLY
13
12
A
PRO
14
A
PRO
14
0.09
A
ALA
15
A
ALA
15
12
A
PRO
16
A
PRO
16
0.00
A
GLY
13
A
GLY
13
13
A
PRO
14
A
PRO
14
0.03
A
ALA
15
A
ALA
15
13
A
PRO
16
A
PRO
16
0.06
A
GLY
13
A
GLY
13
14
A
PRO
14
A
PRO
14
0.09
A
ALA
15
A
ALA
15
14
A
PRO
16
A
PRO
16
0.08
A
GLY
13
A
GLY
13
15
A
PRO
14
A
PRO
14
0.06
A
ALA
15
A
ALA
15
15
A
PRO
16
A
PRO
16
0.04
A
GLY
13
A
GLY
13
16
A
PRO
14
A
PRO
14
0.05
A
ALA
15
A
ALA
15
16
A
PRO
16
A
PRO
16
-0.01
A
GLY
13
A
GLY
13
17
A
PRO
14
A
PRO
14
0.10
A
ALA
15
A
ALA
15
17
A
PRO
16
A
PRO
16
0.03
A
GLY
13
A
GLY
13
18
A
PRO
14
A
PRO
14
0.04
A
ALA
15
A
ALA
15
18
A
PRO
16
A
PRO
16
-0.03
A
GLY
13
A
GLY
13
19
A
PRO
14
A
PRO
14
0.07
A
ALA
15
A
ALA
15
19
A
PRO
16
A
PRO
16
0.10
A
GLY
13
A
GLY
13
20
A
PRO
14
A
PRO
14
0.05
A
ALA
15
A
ALA
15
20
A
PRO
16
A
PRO
16
-0.01
NP_058078
GB
1
4
7948997
NVVLPGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRA
ETRLWSPQVS
4
93
1V5L
8
97
7948997
A
1
8
97
1
cloning artifact
GLY
1
1V5L
A
7948997
GB
1
1
cloning artifact
SER
2
1V5L
A
7948997
GB
2
1
cloning artifact
SER
3
1V5L
A
7948997
GB
3
1
cloning artifact
GLY
4
1V5L
A
7948997
GB
4
1
cloning artifact
SER
5
1V5L
A
7948997
GB
5
1
cloning artifact
SER
6
1V5L
A
7948997
GB
6
1
cloning artifact
GLY
7
1V5L
A
7948997
GB
7
1
cloning artifact
SER
98
1V5L
A
7948997
GB
98
1
cloning artifact
GLY
99
1V5L
A
7948997
GB
99
1
cloning artifact
PRO
100
1V5L
A
7948997
GB
100
1
cloning artifact
SER
101
1V5L
A
7948997
GB
101
1
cloning artifact
SER
102
1V5L
A
7948997
GB
102
1
cloning artifact
GLY
103
1V5L
A
7948997
GB
103
2
2
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
VAL
10
A
VAL
10
A
PRO
12
A
PRO
12
A
GLN
79
A
GLN
79
A
CYS
81
A
CYS
81
A
SER
22
A
SER
22
A
GLY
24
A
GLY
24
A
GLN
29
A
GLN
29
A
VAL
32
A
VAL
32
A
PHE
59
A
PHE
59
A
GLY
60
A
GLY
60
A
ILE
53
A
ILE
53
A
ILE
56
A
ILE
56
A
LYS
83
A
LYS
83
A
ILE
84
A
ILE
84