1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Li, H.
Tochio, N.
Koshiba, S.
Inoue, M.
Hirota, H.
Kigawa, T.
Yokoyama, S.
RIKEN Structural Genomics/Proteomics Initiative (RSGI)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
S
C
N
142
N
C
N
143
N
C
N
144
N
C
N
145
N
O
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
N
N
160
S
C
N
161
N
C
N
162
N
O
N
163
N
C
N
164
N
C
N
165
N
C
N
166
N
C
N
167
N
O
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
N
N
182
S
C
N
183
N
C
N
184
N
O
N
185
N
C
N
186
N
C
N
187
N
C
N
188
N
C
N
189
N
N
N
190
N
O
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
N
N
207
S
C
N
208
N
C
N
209
N
O
N
210
N
C
N
211
N
C
N
212
N
S
N
213
N
C
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
N
N
227
S
C
N
228
N
C
N
229
N
O
N
230
N
C
Y
231
N
C
Y
232
N
C
Y
233
N
C
Y
234
N
C
Y
235
N
C
Y
236
N
C
N
237
N
O
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
N
N
250
S
C
N
251
N
C
N
252
N
O
N
253
N
C
N
254
N
C
N
255
N
C
N
256
N
O
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
N
N
267
S
C
N
268
N
C
N
269
N
O
N
270
N
C
N
271
N
O
N
272
N
O
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
N
N
281
S
C
N
282
N
C
N
283
N
O
N
284
R
C
N
285
N
O
N
286
N
C
N
287
N
O
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
N
N
298
S
C
N
299
N
C
N
300
N
O
N
301
N
C
Y
302
N
C
Y
303
N
C
Y
304
N
C
Y
305
N
N
Y
306
N
C
Y
307
N
C
Y
308
N
C
Y
309
N
C
Y
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
N
N
325
S
C
N
326
N
C
N
327
N
O
N
328
N
C
Y
329
N
C
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
O
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
N
353
N
C
N
354
N
C
N
355
N
O
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
doub
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
doub
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
doub
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
doub
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
Y
225
N
doub
Y
226
N
sing
Y
227
N
sing
N
228
N
sing
Y
229
N
doub
N
230
N
sing
Y
231
N
doub
N
232
N
sing
Y
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
doub
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
doub
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
doub
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
Y
294
N
doub
Y
295
N
sing
Y
296
N
sing
N
297
N
sing
Y
298
N
doub
Y
299
N
sing
Y
300
N
sing
N
301
N
sing
Y
302
N
sing
Y
303
N
doub
N
304
N
sing
Y
305
N
doub
N
306
N
sing
Y
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
doub
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
Y
322
N
doub
Y
323
N
sing
Y
324
N
sing
N
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
doub
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
To be Published
0353
Solution Structure of the Pleckstrin Homology Domain of Human KIAA0053 Protein
10.2210/pdb1v89/pdb
pdb_00001v89
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
1
1.0
13425.206
Hypothetical protein KIAA0053
Pleckstrin Homology (PH) Domain
1
man
polymer
no
no
GSSGSSGPIKMGWLKKQRSIVKNWQQRYFVLRAQQLYYYKDEEDTKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASW
DQNRMGQDSYVLMASSQAEMEEWVKFLRRVAGSGPSSG
GSSGSSGPIKMGWLKKQRSIVKNWQQRYFVLRAQQLYYYKDEEDTKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASW
DQNRMGQDSYVLMASSQAEMEEWVKFLRRVAGSGPSSG
A
hsk002000050.1
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
sample
Cell-free protein synthesis
KAZUSA cDNA ha01417
9606
Homo sapiens
PLASMID
P030512-36
RIKEN Structural Genomics/Proteomics Initiative
RSGI
database_2
pdbx_nmr_software
pdbx_struct_assembly
pdbx_struct_oper_list
struct_ref_seq_dif
chem_comp_atom
chem_comp_bond
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Data collection
1
0
2004-06-29
1
1
2008-04-27
1
2
2011-07-13
1
3
2022-03-02
1
4
2023-12-27
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
_struct_ref_seq_dif.details
Y
PDBJ
Y
PDBJ
2003-12-29
REL
structures with the least restraint violations, target function
100
20
3D_15N-separated_NOESY
3D_13C-separated_NOESY
120mM
6.0
ambient
298
K
torsion angle dynamics
1
lowest energy
1.30mM Pleckstrin Homology domain U-13C, 15N; 20mM Phosphate buffer Na(6.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 90% H2O, 10% D2O
90% H2O/10% D2O
1.30mM Pleckstrin Homology domain U-13C, 15N; 20mM Phosphate buffer Na(6.0); 100mM NaCl; 1mM d-DTT; 0.02% NaN3; 100% D2O
100% D2O
JEOL
collection
Delta
4.2
Delaglio, F.
processing
NMRPipe
20020425
Johnson, B. A.
data analysis
NMRView
5.0.4
Kobayashi, N.
data analysis
KUJIRA
0.854
Guentert, P.
structure solution
CYANA
1.0.7
Guentert, P.
refinement
CYANA
1.0.7
920
JEOL
ECA
GLY
1
n
1
GLY
1
A
SER
2
n
2
SER
2
A
SER
3
n
3
SER
3
A
GLY
4
n
4
GLY
4
A
SER
5
n
5
SER
5
A
SER
6
n
6
SER
6
A
GLY
7
n
7
GLY
7
A
PRO
8
n
8
PRO
8
A
ILE
9
n
9
ILE
9
A
LYS
10
n
10
LYS
10
A
MET
11
n
11
MET
11
A
GLY
12
n
12
GLY
12
A
TRP
13
n
13
TRP
13
A
LEU
14
n
14
LEU
14
A
LYS
15
n
15
LYS
15
A
LYS
16
n
16
LYS
16
A
GLN
17
n
17
GLN
17
A
ARG
18
n
18
ARG
18
A
SER
19
n
19
SER
19
A
ILE
20
n
20
ILE
20
A
VAL
21
n
21
VAL
21
A
LYS
22
n
22
LYS
22
A
ASN
23
n
23
ASN
23
A
TRP
24
n
24
TRP
24
A
GLN
25
n
25
GLN
25
A
GLN
26
n
26
GLN
26
A
ARG
27
n
27
ARG
27
A
TYR
28
n
28
TYR
28
A
PHE
29
n
29
PHE
29
A
VAL
30
n
30
VAL
30
A
LEU
31
n
31
LEU
31
A
ARG
32
n
32
ARG
32
A
ALA
33
n
33
ALA
33
A
GLN
34
n
34
GLN
34
A
GLN
35
n
35
GLN
35
A
LEU
36
n
36
LEU
36
A
TYR
37
n
37
TYR
37
A
TYR
38
n
38
TYR
38
A
TYR
39
n
39
TYR
39
A
LYS
40
n
40
LYS
40
A
ASP
41
n
41
ASP
41
A
GLU
42
n
42
GLU
42
A
GLU
43
n
43
GLU
43
A
ASP
44
n
44
ASP
44
A
THR
45
n
45
THR
45
A
LYS
46
n
46
LYS
46
A
PRO
47
n
47
PRO
47
A
GLN
48
n
48
GLN
48
A
GLY
49
n
49
GLY
49
A
CYS
50
n
50
CYS
50
A
MET
51
n
51
MET
51
A
TYR
52
n
52
TYR
52
A
LEU
53
n
53
LEU
53
A
PRO
54
n
54
PRO
54
A
GLY
55
n
55
GLY
55
A
CYS
56
n
56
CYS
56
A
THR
57
n
57
THR
57
A
ILE
58
n
58
ILE
58
A
LYS
59
n
59
LYS
59
A
GLU
60
n
60
GLU
60
A
ILE
61
n
61
ILE
61
A
ALA
62
n
62
ALA
62
A
THR
63
n
63
THR
63
A
ASN
64
n
64
ASN
64
A
PRO
65
n
65
PRO
65
A
GLU
66
n
66
GLU
66
A
GLU
67
n
67
GLU
67
A
ALA
68
n
68
ALA
68
A
GLY
69
n
69
GLY
69
A
LYS
70
n
70
LYS
70
A
PHE
71
n
71
PHE
71
A
VAL
72
n
72
VAL
72
A
PHE
73
n
73
PHE
73
A
GLU
74
n
74
GLU
74
A
ILE
75
n
75
ILE
75
A
ILE
76
n
76
ILE
76
A
PRO
77
n
77
PRO
77
A
ALA
78
n
78
ALA
78
A
SER
79
n
79
SER
79
A
TRP
80
n
80
TRP
80
A
ASP
81
n
81
ASP
81
A
GLN
82
n
82
GLN
82
A
ASN
83
n
83
ASN
83
A
ARG
84
n
84
ARG
84
A
MET
85
n
85
MET
85
A
GLY
86
n
86
GLY
86
A
GLN
87
n
87
GLN
87
A
ASP
88
n
88
ASP
88
A
SER
89
n
89
SER
89
A
TYR
90
n
90
TYR
90
A
VAL
91
n
91
VAL
91
A
LEU
92
n
92
LEU
92
A
MET
93
n
93
MET
93
A
ALA
94
n
94
ALA
94
A
SER
95
n
95
SER
95
A
SER
96
n
96
SER
96
A
GLN
97
n
97
GLN
97
A
ALA
98
n
98
ALA
98
A
GLU
99
n
99
GLU
99
A
MET
100
n
100
MET
100
A
GLU
101
n
101
GLU
101
A
GLU
102
n
102
GLU
102
A
TRP
103
n
103
TRP
103
A
VAL
104
n
104
VAL
104
A
LYS
105
n
105
LYS
105
A
PHE
106
n
106
PHE
106
A
LEU
107
n
107
LEU
107
A
ARG
108
n
108
ARG
108
A
ARG
109
n
109
ARG
109
A
VAL
110
n
110
VAL
110
A
ALA
111
n
111
ALA
111
A
GLY
112
n
112
GLY
112
A
SER
113
n
113
SER
113
A
GLY
114
n
114
GLY
114
A
PRO
115
n
115
PRO
115
A
SER
116
n
116
SER
116
A
SER
117
n
117
SER
117
A
GLY
118
n
118
GLY
118
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
MET
51
A
O
MET
51
A
N
LEU
36
A
N
LEU
36
A
O
TYR
39
A
O
TYR
39
A
N
TYR
28
A
N
TYR
28
A
O
ARG
27
A
O
ARG
27
A
N
LEU
14
A
N
LEU
14
A
N
LYS
15
A
N
LYS
15
A
O
MET
93
A
O
MET
93
A
O
TYR
90
A
O
TYR
90
A
N
ILE
75
A
N
ILE
75
A
O
GLU
74
A
O
GLU
74
A
N
LYS
59
A
N
LYS
59
1
A
A
O
H
VAL
ARG
104
108
1.53
1
A
A
O
H
ILE
TYR
75
90
1.55
2
A
A
O
H
TRP
LEU
103
107
1.52
2
A
A
O
H
LYS
LEU
10
31
1.57
2
A
A
O
H
VAL
ARG
104
108
1.57
3
A
A
O
H
GLU
LYS
101
105
1.56
3
A
A
O
H
TRP
LEU
103
107
1.59
4
A
A
O
H
LYS
LEU
10
31
1.60
5
A
A
O
H
ILE
TYR
75
90
1.53
5
A
A
O
H
LYS
ARG
105
109
1.56
5
A
A
O
H
VAL
ARG
104
108
1.59
5
A
A
H
O
ILE
LEU
9
31
1.60
6
A
A
O
H
ILE
TYR
75
90
1.56
6
A
A
O
H
TRP
LEU
103
107
1.57
7
A
A
O
H
LEU
ALA
107
111
1.57
7
A
A
O
H
ILE
TYR
75
90
1.57
8
A
A
O
H
GLU
LYS
101
105
1.59
9
A
A
O
H
GLU
LYS
101
105
1.53
10
A
A
O
H
LYS
ARG
105
109
1.60
11
A
A
O
H
LYS
ARG
105
109
1.55
11
A
A
H
O
ILE
LEU
9
31
1.57
12
A
A
H
O
ARG
ASN
18
23
1.54
12
A
A
O
H
ILE
TYR
75
90
1.58
13
A
A
O
H
VAL
ARG
104
108
1.56
14
A
A
O
H
ILE
TYR
75
90
1.55
14
A
A
O
H
LYS
ARG
105
109
1.55
15
A
A
H
O
ILE
LEU
9
31
1.49
15
A
A
O
H
LYS
LEU
10
31
1.52
15
A
A
O
H
TRP
LEU
103
107
1.59
15
A
A
O
H
LYS
ARG
105
109
1.59
15
A
A
O
H
GLN
GLU
97
101
1.59
15
A
A
O
H
VAL
ARG
104
108
1.59
16
A
A
O
H
ILE
TYR
75
90
1.51
16
A
A
O
H
LEU
ALA
107
111
1.58
16
A
A
H
O
ILE
TYR
75
90
1.59
17
A
A
O
H
ILE
TYR
75
90
1.52
17
A
A
O
H
LYS
ARG
105
109
1.60
18
A
A
O
H
LYS
LEU
10
31
1.55
18
A
A
O
H
TRP
LEU
103
107
1.55
18
A
A
H
O
ILE
LEU
9
31
1.57
19
A
A
O
H
VAL
ARG
104
108
1.59
20
A
A
H
O
ARG
ASN
18
23
1.56
20
A
A
H
O
ILE
LEU
9
31
1.58
1
A
SER
6
172.67
-55.29
1
A
ARG
18
-56.26
-173.81
1
A
LYS
22
-98.78
38.86
1
A
ALA
33
50.60
-142.91
1
A
GLN
34
-94.50
56.28
1
A
GLU
42
-98.59
40.69
1
A
GLU
43
-125.54
-54.57
1
A
GLN
48
-79.85
-70.59
1
A
THR
63
-66.29
-127.33
1
A
PHE
71
-110.80
77.29
1
A
SER
79
53.40
101.26
1
A
TRP
80
-161.13
92.58
1
A
ASP
81
-171.56
-47.54
1
A
GLN
82
-100.14
41.82
1
A
ARG
84
-94.98
43.63
1
A
MET
85
-128.14
-74.50
1
A
GLN
87
-166.26
79.49
1
A
SER
89
-57.64
176.58
1
A
ARG
109
-50.24
-71.06
1
A
SER
116
-162.21
110.69
2
A
SER
6
-42.54
109.84
2
A
PRO
8
-74.95
-163.09
2
A
ILE
9
-129.13
-57.80
2
A
ARG
18
-58.42
179.15
2
A
SER
19
-48.81
-90.10
2
A
GLN
26
-67.38
99.13
2
A
ALA
33
47.13
-144.31
2
A
GLU
43
-77.29
-89.84
2
A
ASP
44
39.67
85.97
2
A
ASN
64
62.47
167.82
2
A
GLU
66
-113.95
-77.23
2
A
GLU
67
59.82
-156.85
2
A
PHE
71
-110.14
65.97
2
A
TRP
80
-168.24
48.48
2
A
ASP
81
-156.96
-56.47
2
A
ASN
83
63.98
-177.96
2
A
ARG
84
-95.14
30.90
2
A
GLN
87
39.74
62.44
2
A
SER
117
-165.39
88.52
3
A
SER
3
-178.65
144.51
3
A
SER
5
51.19
99.40
3
A
SER
19
-39.71
-88.02
3
A
ALA
33
57.64
-143.87
3
A
GLN
34
-91.74
49.32
3
A
GLU
42
-101.74
46.37
3
A
ASN
64
-40.42
159.26
3
A
GLU
66
-98.12
31.15
3
A
ALA
78
38.90
58.50
3
A
SER
79
37.80
88.98
3
A
ASP
81
-40.00
99.98
3
A
ASN
83
173.72
-66.63
3
A
ARG
84
-174.76
34.21
3
A
SER
89
52.37
174.91
3
A
SER
113
80.52
97.65
3
A
SER
117
42.34
89.32
4
A
SER
5
-95.59
-62.46
4
A
ILE
20
39.23
58.96
4
A
LYS
22
-101.17
40.97
4
A
ALA
33
39.89
-144.08
4
A
GLN
34
-97.13
49.92
4
A
ASP
41
170.06
172.10
4
A
ASN
64
55.97
167.25
4
A
GLU
66
-150.72
-75.10
4
A
ALA
68
49.34
-155.61
4
A
TRP
80
-68.20
-76.07
4
A
ASP
81
80.80
-58.84
4
A
ASN
83
-156.24
25.92
4
A
MET
85
-168.30
87.10
4
A
GLN
87
67.54
90.35
4
A
ASP
88
-107.23
76.73
4
A
SER
89
-55.79
-179.16
4
A
SER
116
43.05
84.16
4
A
SER
117
-98.69
-62.20
5
A
SER
3
-127.78
-59.52
5
A
SER
5
41.37
88.88
5
A
ARG
18
-58.09
-174.21
5
A
SER
19
-48.32
-94.69
5
A
VAL
21
178.13
150.38
5
A
ALA
33
39.44
-140.31
5
A
GLN
34
-91.70
55.03
5
A
GLU
42
-91.02
39.53
5
A
GLU
43
-121.68
-59.75
5
A
ASP
44
-46.58
158.35
5
A
GLN
48
-105.04
-69.39
5
A
THR
63
-66.35
-123.31
5
A
ALA
78
-40.17
158.39
5
A
SER
79
61.12
-174.32
5
A
TRP
80
67.83
69.95
5
A
GLN
82
59.01
99.56
5
A
ARG
84
36.76
65.03
5
A
MET
85
37.95
57.45
5
A
GLN
87
-178.25
88.89
5
A
SER
89
50.31
-179.01
5
A
SER
116
64.32
101.64
5
A
SER
117
-144.70
-58.14
6
A
SER
2
-156.84
-59.00
6
A
SER
6
-166.32
-57.56
6
A
ARG
18
-61.60
-177.03
6
A
ILE
20
-132.38
-60.65
6
A
ALA
33
42.06
-141.41
6
A
GLN
34
-97.19
53.99
6
A
GLU
42
-97.17
40.00
6
A
GLU
43
-145.92
44.89
6
A
ASN
64
-40.66
159.74
6
A
SER
79
41.42
89.58
6
A
GLN
82
40.20
77.70
6
A
GLN
87
179.95
55.53
6
A
ASP
88
173.12
169.11
6
A
SER
113
-45.52
151.55
6
A
SER
116
-146.28
-57.16
7
A
SER
2
-140.92
-48.33
7
A
SER
3
-140.28
-52.02
7
A
SER
5
-168.11
96.90
7
A
PRO
8
-75.02
-167.63
7
A
ILE
9
-125.97
-56.58
7
A
SER
19
-78.31
-94.51
7
A
VAL
21
167.30
-30.24
7
A
LYS
22
64.00
67.16
7
A
GLN
26
-67.03
97.90
7
A
ARG
32
-132.30
-153.80
7
A
GLN
34
36.28
44.64
7
A
GLU
42
-100.47
42.99
7
A
GLU
43
-121.30
-58.21
7
A
ASP
44
-46.07
169.02
7
A
GLU
66
-177.65
-49.85
7
A
ALA
68
-155.67
61.76
7
A
TRP
80
46.45
90.46
7
A
ASN
83
60.46
151.60
7
A
ARG
84
69.09
88.87
7
A
MET
85
38.34
43.29
7
A
SER
89
52.32
175.17
7
A
LEU
107
-61.05
-70.10
7
A
SER
116
64.71
166.94
8
A
SER
3
-179.13
114.19
8
A
SER
6
-167.03
112.58
8
A
GLN
17
-43.06
155.37
8
A
SER
19
69.93
143.14
8
A
ILE
20
71.23
-63.70
8
A
ALA
33
40.23
-102.92
8
A
GLN
48
-70.95
-87.25
8
A
ASN
64
171.89
167.75
8
A
GLU
67
-60.96
-108.76
8
A
ALA
68
54.90
91.11
8
A
SER
79
55.48
74.87
8
A
ASP
81
75.54
115.74
8
A
GLN
82
174.79
-54.51
8
A
MET
85
-167.83
85.39
8
A
GLN
87
-132.21
-55.60
8
A
ASP
88
61.37
81.34
8
A
SER
95
-95.77
38.49
8
A
SER
96
179.83
139.23
8
A
ARG
109
-55.17
-70.05
8
A
SER
113
-39.42
104.80
9
A
PRO
8
-74.97
-169.99
9
A
ILE
9
-106.49
-68.90
9
A
ILE
20
66.01
-84.15
9
A
ALA
33
43.00
-139.71
9
A
GLN
34
-103.80
44.45
9
A
GLU
42
-103.34
43.90
9
A
ASN
64
171.48
166.00
9
A
GLU
66
-90.78
-64.39
9
A
ALA
78
47.23
-173.06
9
A
GLN
82
42.84
-99.03
9
A
ASN
83
68.29
-67.05
9
A
ARG
84
-179.46
42.20
9
A
ASP
88
176.49
171.63
9
A
SER
89
-58.30
179.19
9
A
ARG
109
-41.26
-71.78
10
A
SER
5
-176.22
92.18
10
A
ILE
9
-124.35
-60.75
10
A
ILE
20
66.42
-81.34
10
A
ARG
32
-93.90
-73.09
10
A
ALA
33
-174.36
129.83
10
A
GLU
42
-96.60
45.55
10
A
GLU
43
-125.87
-58.19
10
A
GLN
48
-113.09
-72.54
10
A
ASN
64
67.08
167.89
10
A
GLU
66
-166.79
84.63
10
A
SER
79
-58.21
85.91
10
A
TRP
80
174.13
60.22
10
A
ASP
81
-122.69
-50.91
10
A
GLN
82
-65.55
84.99
10
A
ASN
83
-170.33
142.55
10
A
ARG
84
-101.09
43.66
10
A
MET
85
-145.46
-62.19
10
A
GLN
87
-170.78
-53.84
10
A
SER
89
179.17
-174.64
10
A
LEU
107
-55.32
-70.08
11
A
SER
3
-136.53
-59.78
11
A
SER
5
63.39
87.64
11
A
SER
6
176.65
78.72
11
A
PRO
8
-74.94
-169.81
11
A
ILE
9
-108.95
-72.64
11
A
ARG
18
-55.45
173.91
11
A
SER
19
-42.22
-87.39
11
A
ARG
32
-118.62
-79.01
11
A
ALA
33
-107.46
-150.23
11
A
GLU
42
-97.91
49.33
11
A
GLU
43
-120.68
-69.26
11
A
ASN
64
55.19
169.04
11
A
GLU
66
-117.47
-74.52
11
A
GLU
67
55.75
-156.88
11
A
ALA
68
-152.15
46.92
11
A
LYS
70
-91.71
38.29
11
A
PHE
71
42.77
80.23
11
A
TRP
80
-174.71
72.21
11
A
GLN
82
-178.28
-53.13
11
A
MET
85
-158.53
37.33
11
A
GLN
87
-170.49
82.12
11
A
SER
89
53.01
172.84
11
A
TRP
103
-53.72
-71.68
11
A
LEU
107
-52.75
-70.04
11
A
ARG
109
-38.22
-70.87
11
A
SER
117
41.25
88.00
12
A
SER
3
63.47
116.51
12
A
SER
5
-168.93
81.81
12
A
PRO
8
-75.01
-169.80
12
A
ILE
9
-120.81
-63.32
12
A
ILE
20
70.78
-75.74
12
A
LYS
22
38.99
64.26
12
A
ALA
33
48.20
-138.72
12
A
GLN
34
-98.07
44.68
12
A
GLU
42
-89.17
37.41
12
A
ILE
61
-67.89
99.38
12
A
THR
63
-61.05
-121.82
12
A
ASN
64
-45.80
159.90
12
A
GLU
66
-116.97
51.35
12
A
SER
79
60.44
74.39
12
A
ARG
84
38.88
36.15
12
A
MET
85
-155.94
87.44
12
A
GLN
87
-156.77
38.74
12
A
ASP
88
-172.28
-67.22
12
A
SER
89
-174.09
-177.80
12
A
ARG
109
-41.79
-70.44
12
A
SER
113
172.54
77.20
12
A
SER
116
-54.64
102.43
13
A
SER
2
73.76
-62.86
13
A
SER
3
59.47
95.48
13
A
PRO
8
-75.02
-166.19
13
A
ILE
20
73.23
-68.71
13
A
LYS
22
38.17
41.58
13
A
ALA
33
45.45
-142.24
13
A
GLU
42
-103.92
50.56
13
A
GLU
43
-120.20
-58.17
13
A
ASN
64
-41.46
159.80
13
A
GLU
66
-95.68
34.50
13
A
TRP
80
-168.51
54.63
13
A
ASP
81
-139.89
-63.26
13
A
ARG
84
-117.71
59.20
13
A
GLN
87
-109.67
54.38
13
A
ASP
88
-41.44
107.72
14
A
SER
3
-152.07
80.64
14
A
SER
5
-171.85
126.53
14
A
SER
6
-112.87
70.07
14
A
PRO
8
-75.04
-165.13
14
A
ARG
18
-68.57
-175.34
14
A
ILE
20
68.77
-68.26
14
A
ARG
32
-129.82
-151.91
14
A
GLN
34
37.19
44.44
14
A
GLU
42
-102.15
46.24
14
A
THR
63
-85.20
-126.22
14
A
GLU
67
-42.44
164.42
14
A
ALA
68
-90.87
45.11
14
A
SER
79
178.62
83.08
14
A
ASP
81
-170.62
-57.44
14
A
ASN
83
46.15
-170.83
14
A
ARG
84
-157.98
30.28
14
A
ARG
109
-37.71
-72.82
14
A
SER
117
-133.97
-57.57
15
A
SER
3
-55.11
170.91
15
A
SER
5
-135.39
-56.78
15
A
GLN
17
-46.50
159.02
15
A
SER
19
-67.26
97.93
15
A
ILE
20
72.26
-66.92
15
A
ALA
33
39.66
-143.61
15
A
GLN
34
-98.15
39.87
15
A
GLU
42
-116.01
57.95
15
A
GLU
43
-142.93
-49.53
15
A
ASP
44
-55.39
177.58
15
A
GLU
66
-178.11
-50.66
15
A
SER
79
-165.44
73.04
15
A
TRP
80
-171.98
77.31
15
A
ASP
81
-148.63
-63.42
15
A
ASN
83
169.08
156.36
15
A
MET
85
-162.66
62.71
16
A
SER
2
61.82
150.51
16
A
SER
3
-135.65
-53.97
16
A
SER
5
71.57
88.26
16
A
ILE
20
66.86
-80.97
16
A
ALA
33
56.67
-140.52
16
A
GLU
42
-95.25
47.03
16
A
GLU
43
-127.39
-53.28
16
A
THR
63
-86.64
-121.25
16
A
ASN
64
-46.34
169.63
16
A
GLU
66
38.94
55.56
16
A
ALA
68
-88.60
46.96
16
A
LYS
70
-170.09
33.05
16
A
SER
79
50.03
87.22
16
A
TRP
80
175.41
71.07
16
A
GLN
82
172.97
120.76
16
A
ARG
84
176.33
96.24
16
A
MET
85
63.49
86.34
16
A
GLN
87
67.03
83.03
16
A
SER
89
179.80
172.63
17
A
PRO
8
-75.02
-166.57
17
A
ARG
18
-54.32
-174.06
17
A
LYS
22
-93.74
37.24
17
A
ALA
33
50.01
-141.56
17
A
GLN
34
-97.17
52.30
17
A
GLU
42
-88.84
41.88
17
A
THR
45
-131.97
-48.26
17
A
ASN
64
160.85
168.23
17
A
GLU
66
-170.48
76.17
17
A
ALA
68
-176.76
144.68
17
A
ALA
78
36.61
78.22
17
A
SER
79
39.71
94.22
17
A
TRP
80
-57.54
-165.63
17
A
GLN
82
65.51
171.73
17
A
ARG
84
62.92
89.23
17
A
MET
85
35.13
62.68
17
A
GLN
87
-179.53
-50.99
17
A
ASP
88
-41.37
155.08
17
A
SER
89
172.78
165.66
17
A
ARG
109
-49.00
-70.04
17
A
SER
116
-160.80
97.91
18
A
SER
2
57.29
78.46
18
A
SER
5
-142.49
-56.37
18
A
SER
19
-45.28
-88.89
18
A
ALA
33
42.64
-143.37
18
A
GLN
34
-90.13
57.35
18
A
LYS
40
-39.14
-79.00
18
A
ASP
41
-106.95
-89.44
18
A
GLU
42
-174.94
38.42
18
A
THR
45
-87.09
43.60
18
A
LYS
70
-95.64
52.30
18
A
TRP
80
-124.27
-67.50
18
A
ASP
81
59.05
-177.77
18
A
GLN
82
-153.51
70.97
18
A
ASN
83
-179.09
82.53
18
A
MET
85
-168.91
106.53
18
A
GLN
87
33.97
46.95
18
A
SER
89
-71.55
-166.70
18
A
SER
96
175.16
150.13
18
A
SER
117
-151.29
83.19
19
A
SER
2
-168.08
88.84
19
A
SER
5
-96.70
-60.86
19
A
SER
6
-177.77
137.96
19
A
PRO
8
-75.01
-169.20
19
A
SER
19
-42.10
-82.49
19
A
ALA
33
40.04
-141.68
19
A
GLN
34
-91.67
52.99
19
A
LYS
40
-57.48
-78.50
19
A
ASP
41
-109.11
-157.99
19
A
GLU
42
-84.37
44.10
19
A
ASP
44
-39.25
98.80
19
A
THR
45
-133.21
-44.61
19
A
GLN
48
-43.56
-71.90
19
A
ASN
64
-40.62
159.55
19
A
SER
79
-57.26
97.72
19
A
TRP
80
-133.86
-50.60
19
A
ASP
81
-63.23
80.90
19
A
GLN
82
-140.64
-58.84
19
A
ARG
84
-144.62
16.15
19
A
GLN
87
-112.18
55.01
19
A
SER
113
67.13
146.41
19
A
SER
116
-48.42
175.69
20
A
SER
3
-137.17
-56.86
20
A
SER
6
-164.59
-51.46
20
A
ARG
18
-70.80
-153.53
20
A
LYS
22
41.53
28.14
20
A
ALA
33
52.72
-141.81
20
A
GLN
34
-100.53
52.92
20
A
GLU
42
-87.84
43.89
20
A
GLU
43
-121.34
-64.65
20
A
ASP
44
-51.21
170.28
20
A
THR
63
-88.91
-126.37
20
A
TRP
80
-161.59
-53.19
20
A
GLN
82
71.50
84.65
20
A
SER
89
-56.76
-163.86
20
A
TRP
103
-57.27
-71.30
20
A
SER
113
47.83
96.37
20
A
SER
116
-160.30
94.47
Solution Structure of the Pleckstrin Homology Domain of Human KIAA0053 Protein
1
N
N
A
GLN
97
A
GLN
97
HELX_P
A
ALA
111
A
ALA
111
1
1
15
SIGNALING PROTEIN
pleckstrin homology domain, phosphatidylinositol binding, structural genomics, RIKEN Structural Genomics/Proteomics Initiative, RSGI, SIGNALING PROTEIN
RHG25_HUMAN
UNP
1
40
P42331
PIKMGWLKKQRSIVKNWQQRYFVLRAQQLYYYKDEEDTKPQGCMYLPGCTIKEIATNPEEAGKFVFEIIPASWDQNRMGQ
DSYVLMASSQAEMEEWVKFLRRVAG
40
144
1V89
8
112
P42331
A
1
8
112
1
cloning artifact
GLY
1
1V89
A
P42331
UNP
1
1
cloning artifact
SER
2
1V89
A
P42331
UNP
2
1
cloning artifact
SER
3
1V89
A
P42331
UNP
3
1
cloning artifact
GLY
4
1V89
A
P42331
UNP
4
1
cloning artifact
SER
5
1V89
A
P42331
UNP
5
1
cloning artifact
SER
6
1V89
A
P42331
UNP
6
1
cloning artifact
GLY
7
1V89
A
P42331
UNP
7
1
cloning artifact
SER
113
1V89
A
P42331
UNP
113
1
cloning artifact
GLY
114
1V89
A
P42331
UNP
114
1
cloning artifact
PRO
115
1V89
A
P42331
UNP
115
1
cloning artifact
SER
116
1V89
A
P42331
UNP
116
1
cloning artifact
SER
117
1V89
A
P42331
UNP
117
1
cloning artifact
GLY
118
1V89
A
P42331
UNP
118
7
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLY
49
A
GLY
49
A
MET
51
A
MET
51
A
GLN
35
A
GLN
35
A
TYR
39
A
TYR
39
A
TRP
24
A
TRP
24
A
ARG
32
A
ARG
32
A
LYS
10
A
LYS
10
A
GLN
17
A
GLN
17
A
TYR
90
A
TYR
90
A
MET
93
A
MET
93
A
VAL
72
A
VAL
72
A
PRO
77
A
PRO
77
A
CYS
56
A
CYS
56
A
ILE
61
A
ILE
61
1
P 1