0.013422
0.007749
0.000000
0.000000
0.015498
0.000000
0.000000
0.000000
0.003773
0.00000
0.00000
0.00000
Mizutani, K.
Machida, Y.
Unzai, S.
Park, S.-Y.
Tame, J.R.H.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
74.506
74.506
265.009
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
O4 P -3
94.971
PHOSPHATE ION
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
P
N
274
N
O
N
275
N
O
N
276
N
O
N
277
N
O
N
278
N
N
N
279
S
C
N
280
N
C
N
281
N
O
N
282
N
C
N
283
N
C
N
284
N
C
N
285
N
O
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
N
N
296
S
C
N
297
N
C
N
298
N
O
N
299
N
C
N
300
N
O
N
301
N
O
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
N
N
310
S
C
N
311
N
C
N
312
N
O
N
313
R
C
N
314
N
O
N
315
N
C
N
316
N
O
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
N
N
327
S
C
N
328
N
C
N
329
N
O
N
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
N
Y
335
N
C
Y
336
N
C
Y
337
N
C
Y
338
N
C
Y
339
N
C
N
340
N
O
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
N
N
354
S
C
N
355
N
C
N
356
N
O
N
357
N
C
Y
358
N
C
Y
359
N
C
Y
360
N
C
Y
361
N
C
Y
362
N
C
Y
363
N
C
N
364
N
O
N
365
N
O
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
N
N
378
S
C
N
379
N
C
N
380
N
O
N
381
N
C
N
382
N
C
N
383
N
C
N
384
N
O
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
doub
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
doub
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
doub
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
doub
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
doub
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
doub
Y
326
N
sing
Y
327
N
sing
N
328
N
sing
Y
329
N
sing
Y
330
N
doub
N
331
N
sing
Y
332
N
doub
N
333
N
sing
Y
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
doub
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
Y
349
N
doub
Y
350
N
sing
Y
351
N
sing
N
352
N
sing
Y
353
N
doub
N
354
N
sing
Y
355
N
doub
N
356
N
sing
Y
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
doub
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
43
4454
4463
10.1021/bi036079c
15078091
Crystal structures of the catalytic domains of pseudouridine synthases RluC and RluD from Escherichia coli
2004
10.2210/pdb1v9f/pdb
pdb_00001v9f
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
Monochromator
CCD
2003-10-29
ADSC QUANTUM 210
Si 111
MAD
M
x-ray
1
0.9000
1.0
0.9788
1.0
0.9795
1.0
0.9814
1.0
AR-NW12A
Photon Factory
0.9000, 0.9788, 0.9795, 0.9814
SYNCHROTRON
PHOTON FACTORY BEAMLINE AR-NW12A
37049.461
Ribosomal large subunit pseudouridine synthase D
4.2.1.70
1
man
polymer
94.971
PHOSPHATE ION
1
syn
non-polymer
18.015
water
264
nat
water
Pseudouridylate synthase, Uracil hydrolyase
no
no
AQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQRVLVNGKVCDKPKEKVLGGEQVAINAEIEEEARFEPQD
IPLDIVYEDEDIIIINKPRDLVVHPGAGNPDGTVLNALLHYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVES
LQRREITREYEAVAIGHMTAGGTVDEPISRHPTKRTHMAVHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHMA
HITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDRQALHATMLRLYHPISGIEMEWHAPIPQDMVELIEVMRADFEEHKD
EVDWL
AQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQRVLVNGKVCDKPKEKVLGGEQVAINAEIEEEARFEPQD
IPLDIVYEDEDIIIINKPRDLVVHPGAGNPDGTVLNALLHYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVES
LQRREITREYEAVAIGHMTAGGTVDEPISRHPTKRTHMAVHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHMA
HITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDRQALHATMLRLYHPISGIEMEWHAPIPQDMVELIEVMRADFEEHKD
EVDWL
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Escherichia
Escherichia
Escherichia coli
sample
RLUD
562
Escherichia coli
469008
Escherichia coli BL21(DE3)
BL21(DE3)
Plasmid
pET28b
1
2.9
56.8
VAPOR DIFFUSION, HANGING DROP
7.5
Ethylene glycol, PEG3000, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
chem_comp_atom
chem_comp_bond
database_2
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2004-05-18
1
1
2008-04-27
1
2
2011-07-13
1
3
2023-12-27
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
PDBJ
Y
PDBJ
2004-01-26
REL
PO4
PHOSPHATE ION
HOH
water
PO4
400
2
PO4
PO4
400
A
HOH
1
3
HOH
HOH
401
A
HOH
2
3
HOH
HOH
402
A
HOH
3
3
HOH
HOH
403
A
HOH
4
3
HOH
HOH
404
A
HOH
5
3
HOH
HOH
405
A
HOH
6
3
HOH
HOH
406
A
HOH
7
3
HOH
HOH
407
A
HOH
8
3
HOH
HOH
408
A
HOH
9
3
HOH
HOH
409
A
HOH
10
3
HOH
HOH
410
A
HOH
11
3
HOH
HOH
411
A
HOH
12
3
HOH
HOH
412
A
HOH
13
3
HOH
HOH
413
A
HOH
14
3
HOH
HOH
414
A
HOH
15
3
HOH
HOH
415
A
HOH
16
3
HOH
HOH
416
A
HOH
17
3
HOH
HOH
417
A
HOH
18
3
HOH
HOH
418
A
HOH
19
3
HOH
HOH
419
A
HOH
20
3
HOH
HOH
420
A
HOH
21
3
HOH
HOH
421
A
HOH
22
3
HOH
HOH
422
A
HOH
23
3
HOH
HOH
423
A
HOH
24
3
HOH
HOH
424
A
HOH
25
3
HOH
HOH
425
A
HOH
26
3
HOH
HOH
426
A
HOH
27
3
HOH
HOH
427
A
HOH
28
3
HOH
HOH
428
A
HOH
29
3
HOH
HOH
429
A
HOH
30
3
HOH
HOH
430
A
HOH
31
3
HOH
HOH
431
A
HOH
32
3
HOH
HOH
432
A
HOH
33
3
HOH
HOH
433
A
HOH
34
3
HOH
HOH
434
A
HOH
35
3
HOH
HOH
435
A
HOH
36
3
HOH
HOH
436
A
HOH
37
3
HOH
HOH
437
A
HOH
38
3
HOH
HOH
438
A
HOH
39
3
HOH
HOH
439
A
HOH
40
3
HOH
HOH
440
A
HOH
41
3
HOH
HOH
441
A
HOH
42
3
HOH
HOH
442
A
HOH
43
3
HOH
HOH
443
A
HOH
44
3
HOH
HOH
444
A
HOH
45
3
HOH
HOH
445
A
HOH
46
3
HOH
HOH
446
A
HOH
47
3
HOH
HOH
447
A
HOH
48
3
HOH
HOH
448
A
HOH
49
3
HOH
HOH
449
A
HOH
50
3
HOH
HOH
450
A
HOH
51
3
HOH
HOH
451
A
HOH
52
3
HOH
HOH
452
A
HOH
53
3
HOH
HOH
453
A
HOH
54
3
HOH
HOH
454
A
HOH
55
3
HOH
HOH
455
A
HOH
56
3
HOH
HOH
456
A
HOH
57
3
HOH
HOH
457
A
HOH
58
3
HOH
HOH
458
A
HOH
59
3
HOH
HOH
459
A
HOH
60
3
HOH
HOH
460
A
HOH
61
3
HOH
HOH
461
A
HOH
62
3
HOH
HOH
462
A
HOH
63
3
HOH
HOH
463
A
HOH
64
3
HOH
HOH
464
A
HOH
65
3
HOH
HOH
465
A
HOH
66
3
HOH
HOH
466
A
HOH
67
3
HOH
HOH
467
A
HOH
68
3
HOH
HOH
468
A
HOH
69
3
HOH
HOH
469
A
HOH
70
3
HOH
HOH
470
A
HOH
71
3
HOH
HOH
471
A
HOH
72
3
HOH
HOH
472
A
HOH
73
3
HOH
HOH
473
A
HOH
74
3
HOH
HOH
474
A
HOH
75
3
HOH
HOH
475
A
HOH
76
3
HOH
HOH
476
A
HOH
77
3
HOH
HOH
477
A
HOH
78
3
HOH
HOH
478
A
HOH
79
3
HOH
HOH
479
A
HOH
80
3
HOH
HOH
480
A
HOH
81
3
HOH
HOH
481
A
HOH
82
3
HOH
HOH
482
A
HOH
83
3
HOH
HOH
483
A
HOH
84
3
HOH
HOH
484
A
HOH
85
3
HOH
HOH
485
A
HOH
86
3
HOH
HOH
486
A
HOH
87
3
HOH
HOH
487
A
HOH
88
3
HOH
HOH
488
A
HOH
89
3
HOH
HOH
489
A
HOH
90
3
HOH
HOH
490
A
HOH
91
3
HOH
HOH
491
A
HOH
92
3
HOH
HOH
492
A
HOH
93
3
HOH
HOH
493
A
HOH
94
3
HOH
HOH
494
A
HOH
95
3
HOH
HOH
495
A
HOH
96
3
HOH
HOH
496
A
HOH
97
3
HOH
HOH
497
A
HOH
98
3
HOH
HOH
498
A
HOH
99
3
HOH
HOH
499
A
HOH
100
3
HOH
HOH
500
A
HOH
101
3
HOH
HOH
501
A
HOH
102
3
HOH
HOH
502
A
HOH
103
3
HOH
HOH
503
A
HOH
104
3
HOH
HOH
504
A
HOH
105
3
HOH
HOH
505
A
HOH
106
3
HOH
HOH
506
A
HOH
107
3
HOH
HOH
507
A
HOH
108
3
HOH
HOH
508
A
HOH
109
3
HOH
HOH
509
A
HOH
110
3
HOH
HOH
510
A
HOH
111
3
HOH
HOH
511
A
HOH
112
3
HOH
HOH
512
A
HOH
113
3
HOH
HOH
513
A
HOH
114
3
HOH
HOH
514
A
HOH
115
3
HOH
HOH
515
A
HOH
116
3
HOH
HOH
516
A
HOH
117
3
HOH
HOH
517
A
HOH
118
3
HOH
HOH
518
A
HOH
119
3
HOH
HOH
519
A
HOH
120
3
HOH
HOH
520
A
HOH
121
3
HOH
HOH
521
A
HOH
122
3
HOH
HOH
522
A
HOH
123
3
HOH
HOH
523
A
HOH
124
3
HOH
HOH
524
A
HOH
125
3
HOH
HOH
525
A
HOH
126
3
HOH
HOH
526
A
HOH
127
3
HOH
HOH
527
A
HOH
128
3
HOH
HOH
528
A
HOH
129
3
HOH
HOH
529
A
HOH
130
3
HOH
HOH
530
A
HOH
131
3
HOH
HOH
531
A
HOH
132
3
HOH
HOH
532
A
HOH
133
3
HOH
HOH
533
A
HOH
134
3
HOH
HOH
534
A
HOH
135
3
HOH
HOH
535
A
HOH
136
3
HOH
HOH
536
A
HOH
137
3
HOH
HOH
537
A
HOH
138
3
HOH
HOH
538
A
HOH
139
3
HOH
HOH
539
A
HOH
140
3
HOH
HOH
540
A
HOH
141
3
HOH
HOH
541
A
HOH
142
3
HOH
HOH
542
A
HOH
143
3
HOH
HOH
543
A
HOH
144
3
HOH
HOH
544
A
HOH
145
3
HOH
HOH
545
A
HOH
146
3
HOH
HOH
546
A
HOH
147
3
HOH
HOH
547
A
HOH
148
3
HOH
HOH
548
A
HOH
149
3
HOH
HOH
549
A
HOH
150
3
HOH
HOH
550
A
HOH
151
3
HOH
HOH
551
A
HOH
152
3
HOH
HOH
552
A
HOH
153
3
HOH
HOH
553
A
HOH
154
3
HOH
HOH
554
A
HOH
155
3
HOH
HOH
555
A
HOH
156
3
HOH
HOH
556
A
HOH
157
3
HOH
HOH
557
A
HOH
158
3
HOH
HOH
558
A
HOH
159
3
HOH
HOH
559
A
HOH
160
3
HOH
HOH
560
A
HOH
161
3
HOH
HOH
561
A
HOH
162
3
HOH
HOH
562
A
HOH
163
3
HOH
HOH
563
A
HOH
164
3
HOH
HOH
564
A
HOH
165
3
HOH
HOH
565
A
HOH
166
3
HOH
HOH
566
A
HOH
167
3
HOH
HOH
567
A
HOH
168
3
HOH
HOH
568
A
HOH
169
3
HOH
HOH
569
A
HOH
170
3
HOH
HOH
570
A
HOH
171
3
HOH
HOH
571
A
HOH
172
3
HOH
HOH
572
A
HOH
173
3
HOH
HOH
573
A
HOH
174
3
HOH
HOH
574
A
HOH
175
3
HOH
HOH
575
A
HOH
176
3
HOH
HOH
576
A
HOH
177
3
HOH
HOH
577
A
HOH
178
3
HOH
HOH
578
A
HOH
179
3
HOH
HOH
579
A
HOH
180
3
HOH
HOH
580
A
HOH
181
3
HOH
HOH
581
A
HOH
182
3
HOH
HOH
582
A
HOH
183
3
HOH
HOH
583
A
HOH
184
3
HOH
HOH
584
A
HOH
185
3
HOH
HOH
585
A
HOH
186
3
HOH
HOH
586
A
HOH
187
3
HOH
HOH
587
A
HOH
188
3
HOH
HOH
588
A
HOH
189
3
HOH
HOH
589
A
HOH
190
3
HOH
HOH
590
A
HOH
191
3
HOH
HOH
591
A
HOH
192
3
HOH
HOH
592
A
HOH
193
3
HOH
HOH
593
A
HOH
194
3
HOH
HOH
594
A
HOH
195
3
HOH
HOH
595
A
HOH
196
3
HOH
HOH
596
A
HOH
197
3
HOH
HOH
597
A
HOH
198
3
HOH
HOH
598
A
HOH
199
3
HOH
HOH
599
A
HOH
200
3
HOH
HOH
600
A
HOH
201
3
HOH
HOH
601
A
HOH
202
3
HOH
HOH
602
A
HOH
203
3
HOH
HOH
603
A
HOH
204
3
HOH
HOH
604
A
HOH
205
3
HOH
HOH
605
A
HOH
206
3
HOH
HOH
606
A
HOH
207
3
HOH
HOH
607
A
HOH
208
3
HOH
HOH
608
A
HOH
209
3
HOH
HOH
609
A
HOH
210
3
HOH
HOH
610
A
HOH
211
3
HOH
HOH
611
A
HOH
212
3
HOH
HOH
612
A
HOH
213
3
HOH
HOH
613
A
HOH
214
3
HOH
HOH
614
A
HOH
215
3
HOH
HOH
615
A
HOH
216
3
HOH
HOH
616
A
HOH
217
3
HOH
HOH
617
A
HOH
218
3
HOH
HOH
618
A
HOH
219
3
HOH
HOH
619
A
HOH
220
3
HOH
HOH
620
A
HOH
221
3
HOH
HOH
621
A
HOH
222
3
HOH
HOH
622
A
HOH
223
3
HOH
HOH
623
A
HOH
224
3
HOH
HOH
624
A
HOH
225
3
HOH
HOH
625
A
HOH
226
3
HOH
HOH
626
A
HOH
227
3
HOH
HOH
627
A
HOH
228
3
HOH
HOH
628
A
HOH
229
3
HOH
HOH
629
A
HOH
230
3
HOH
HOH
630
A
HOH
231
3
HOH
HOH
631
A
HOH
232
3
HOH
HOH
632
A
HOH
233
3
HOH
HOH
633
A
HOH
234
3
HOH
HOH
634
A
HOH
235
3
HOH
HOH
635
A
HOH
236
3
HOH
HOH
636
A
HOH
237
3
HOH
HOH
637
A
HOH
238
3
HOH
HOH
638
A
HOH
239
3
HOH
HOH
639
A
HOH
240
3
HOH
HOH
640
A
HOH
241
3
HOH
HOH
641
A
HOH
242
3
HOH
HOH
642
A
HOH
243
3
HOH
HOH
643
A
HOH
244
3
HOH
HOH
644
A
HOH
245
3
HOH
HOH
645
A
HOH
246
3
HOH
HOH
646
A
HOH
247
3
HOH
HOH
647
A
HOH
248
3
HOH
HOH
648
A
HOH
249
3
HOH
HOH
649
A
HOH
250
3
HOH
HOH
650
A
HOH
251
3
HOH
HOH
651
A
HOH
252
3
HOH
HOH
652
A
HOH
253
3
HOH
HOH
653
A
HOH
254
3
HOH
HOH
654
A
HOH
255
3
HOH
HOH
655
A
HOH
256
3
HOH
HOH
656
A
HOH
257
3
HOH
HOH
657
A
HOH
258
3
HOH
HOH
658
A
HOH
259
3
HOH
HOH
659
A
HOH
260
3
HOH
HOH
660
A
HOH
261
3
HOH
HOH
661
A
HOH
262
3
HOH
HOH
662
A
HOH
263
3
HOH
HOH
663
A
HOH
264
3
HOH
HOH
664
A
n
1
2
A
n
2
3
A
n
3
4
A
n
4
5
A
n
5
6
A
n
6
7
A
n
7
8
A
n
8
9
A
n
9
10
A
n
10
11
A
n
11
12
A
n
12
13
A
n
13
14
A
n
14
15
A
n
15
16
A
n
16
17
A
n
17
18
A
n
18
19
A
n
19
20
A
n
20
21
A
n
21
22
A
n
22
23
A
n
23
24
A
n
24
25
A
n
25
26
A
n
26
27
A
n
27
28
A
n
28
29
A
n
29
30
A
n
30
31
A
n
31
32
A
n
32
33
A
n
33
34
A
n
34
35
A
n
35
36
A
n
36
37
A
n
37
38
A
n
38
39
A
n
39
40
A
n
40
41
A
n
41
42
A
n
42
43
A
n
43
44
A
n
44
45
A
n
45
46
A
n
46
47
A
n
47
48
A
n
48
49
A
n
49
50
A
n
50
51
A
n
51
52
A
n
52
53
A
n
53
54
A
n
54
55
A
n
55
56
A
n
56
57
A
n
57
58
A
n
58
59
A
n
59
60
A
n
60
61
A
n
61
62
A
n
62
63
A
n
63
64
A
n
64
65
A
n
65
66
A
n
66
67
A
n
67
68
A
n
68
69
A
n
69
70
A
n
70
71
A
n
71
72
A
n
72
73
A
n
73
74
A
n
74
75
A
n
75
76
A
PHE
77
n
76
PHE
77
A
GLU
78
n
77
GLU
78
A
PRO
79
n
78
PRO
79
A
GLN
80
n
79
GLN
80
A
ASP
81
n
80
ASP
81
A
ILE
82
n
81
ILE
82
A
PRO
83
n
82
PRO
83
A
LEU
84
n
83
LEU
84
A
ASP
85
n
84
ASP
85
A
ILE
86
n
85
ILE
86
A
VAL
87
n
86
VAL
87
A
TYR
88
n
87
TYR
88
A
GLU
89
n
88
GLU
89
A
ASP
90
n
89
ASP
90
A
GLU
91
n
90
GLU
91
A
ASP
92
n
91
ASP
92
A
ILE
93
n
92
ILE
93
A
ILE
94
n
93
ILE
94
A
ILE
95
n
94
ILE
95
A
ILE
96
n
95
ILE
96
A
ASN
97
n
96
ASN
97
A
LYS
98
n
97
LYS
98
A
PRO
99
n
98
PRO
99
A
ARG
100
n
99
ARG
100
A
ASP
101
n
100
ASP
101
A
LEU
102
n
101
LEU
102
A
VAL
103
n
102
VAL
103
A
VAL
104
n
103
VAL
104
A
HIS
105
n
104
HIS
105
A
PRO
106
n
105
PRO
106
A
GLY
107
n
106
GLY
107
A
ALA
108
n
107
ALA
108
A
GLY
109
n
108
GLY
109
A
ASN
110
n
109
ASN
110
A
PRO
111
n
110
PRO
111
A
ASP
112
n
111
ASP
112
A
GLY
113
n
112
GLY
113
A
THR
114
n
113
THR
114
A
VAL
115
n
114
VAL
115
A
LEU
116
n
115
LEU
116
A
ASN
117
n
116
ASN
117
A
ALA
118
n
117
ALA
118
A
LEU
119
n
118
LEU
119
A
LEU
120
n
119
LEU
120
A
HIS
121
n
120
HIS
121
A
TYR
122
n
121
TYR
122
A
TYR
123
n
122
TYR
123
A
PRO
124
n
123
PRO
124
A
PRO
125
n
124
PRO
125
A
ILE
126
n
125
ILE
126
A
ALA
127
n
126
ALA
127
A
ASP
128
n
127
ASP
128
A
VAL
129
n
128
VAL
129
A
PRO
130
n
129
PRO
130
A
ARG
131
n
130
ARG
131
A
ALA
132
n
131
ALA
132
A
GLY
133
n
132
GLY
133
A
ILE
134
n
133
ILE
134
A
VAL
135
n
134
VAL
135
A
HIS
136
n
135
HIS
136
A
ARG
137
n
136
ARG
137
A
LEU
138
n
137
LEU
138
A
ASP
139
n
138
ASP
139
A
LYS
140
n
139
LYS
140
A
ASP
141
n
140
ASP
141
A
THR
142
n
141
THR
142
A
THR
143
n
142
THR
143
A
GLY
144
n
143
GLY
144
A
LEU
145
n
144
LEU
145
A
MET
146
n
145
MET
146
A
VAL
147
n
146
VAL
147
A
VAL
148
n
147
VAL
148
A
ALA
149
n
148
ALA
149
A
LYS
150
n
149
LYS
150
A
THR
151
n
150
THR
151
A
VAL
152
n
151
VAL
152
A
PRO
153
n
152
PRO
153
A
ALA
154
n
153
ALA
154
A
GLN
155
n
154
GLN
155
A
THR
156
n
155
THR
156
A
ARG
157
n
156
ARG
157
A
LEU
158
n
157
LEU
158
A
VAL
159
n
158
VAL
159
A
GLU
160
n
159
GLU
160
A
SER
161
n
160
SER
161
A
LEU
162
n
161
LEU
162
A
GLN
163
n
162
GLN
163
A
ARG
164
n
163
ARG
164
A
ARG
165
n
164
ARG
165
A
GLU
166
n
165
GLU
166
A
ILE
167
n
166
ILE
167
A
THR
168
n
167
THR
168
A
ARG
169
n
168
ARG
169
A
GLU
170
n
169
GLU
170
A
TYR
171
n
170
TYR
171
A
GLU
172
n
171
GLU
172
A
ALA
173
n
172
ALA
173
A
VAL
174
n
173
VAL
174
A
ALA
175
n
174
ALA
175
A
ILE
176
n
175
ILE
176
A
GLY
177
n
176
GLY
177
A
HIS
178
n
177
HIS
178
A
MET
179
n
178
MET
179
A
THR
180
n
179
THR
180
A
ALA
181
n
180
ALA
181
A
GLY
182
n
181
GLY
182
A
GLY
183
n
182
GLY
183
A
THR
184
n
183
THR
184
A
VAL
185
n
184
VAL
185
A
ASP
186
n
185
ASP
186
A
GLU
187
n
186
GLU
187
A
PRO
188
n
187
PRO
188
A
ILE
189
n
188
ILE
189
A
SER
190
n
189
SER
190
A
ARG
191
n
190
ARG
191
A
HIS
192
n
191
HIS
192
A
PRO
193
n
192
PRO
193
A
THR
194
n
193
THR
194
A
LYS
195
n
194
LYS
195
A
ARG
196
n
195
ARG
196
A
THR
197
n
196
THR
197
A
HIS
198
n
197
HIS
198
A
MET
199
n
198
MET
199
A
ALA
200
n
199
ALA
200
A
VAL
201
n
200
VAL
201
A
HIS
202
n
201
HIS
202
A
PRO
203
n
202
PRO
203
A
MET
204
n
203
MET
204
A
GLY
205
n
204
GLY
205
A
LYS
206
n
205
LYS
206
A
PRO
207
n
206
PRO
207
A
ALA
208
n
207
ALA
208
A
VAL
209
n
208
VAL
209
A
THR
210
n
209
THR
210
A
HIS
211
n
210
HIS
211
A
TYR
212
n
211
TYR
212
A
ARG
213
n
212
ARG
213
A
ILE
214
n
213
ILE
214
A
MET
215
n
214
MET
215
A
GLU
216
n
215
GLU
216
A
HIS
217
n
216
HIS
217
A
PHE
218
n
217
PHE
218
A
ARG
219
n
218
ARG
219
A
VAL
220
n
219
VAL
220
A
HIS
221
n
220
HIS
221
A
THR
222
n
221
THR
222
A
ARG
223
n
222
ARG
223
A
LEU
224
n
223
LEU
224
A
ARG
225
n
224
ARG
225
A
LEU
226
n
225
LEU
226
A
ARG
227
n
226
ARG
227
A
LEU
228
n
227
LEU
228
A
GLU
229
n
228
GLU
229
A
THR
230
n
229
THR
230
A
GLY
231
n
230
GLY
231
A
ARG
232
n
231
ARG
232
A
THR
233
n
232
THR
233
A
HIS
234
n
233
HIS
234
A
GLN
235
n
234
GLN
235
A
ILE
236
n
235
ILE
236
A
ARG
237
n
236
ARG
237
A
VAL
238
n
237
VAL
238
A
HIS
239
n
238
HIS
239
A
MET
240
n
239
MET
240
A
ALA
241
n
240
ALA
241
A
HIS
242
n
241
HIS
242
A
ILE
243
n
242
ILE
243
A
THR
244
n
243
THR
244
A
HIS
245
n
244
HIS
245
A
PRO
246
n
245
PRO
246
A
LEU
247
n
246
LEU
247
A
VAL
248
n
247
VAL
248
A
GLY
249
n
248
GLY
249
A
ASP
250
n
249
ASP
250
A
PRO
251
n
250
PRO
251
A
VAL
252
n
251
VAL
252
A
TYR
253
n
252
TYR
253
A
GLY
254
n
253
GLY
254
A
GLY
255
n
254
GLY
255
A
ARG
256
n
255
ARG
256
A
PRO
257
n
256
PRO
257
A
ARG
258
n
257
ARG
258
A
PRO
259
n
258
PRO
259
A
PRO
260
n
259
PRO
260
A
LYS
261
n
260
LYS
261
A
GLY
262
n
261
GLY
262
A
ALA
263
n
262
ALA
263
A
SER
264
n
263
SER
264
A
GLU
265
n
264
GLU
265
A
ALA
266
n
265
ALA
266
A
PHE
267
n
266
PHE
267
A
ILE
268
n
267
ILE
268
A
SER
269
n
268
SER
269
A
THR
270
n
269
THR
270
A
LEU
271
n
270
LEU
271
A
ARG
272
n
271
ARG
272
A
LYS
273
n
272
LYS
273
A
PHE
274
n
273
PHE
274
A
ASP
275
n
274
ASP
275
A
ARG
276
n
275
ARG
276
A
GLN
277
n
276
GLN
277
A
ALA
278
n
277
ALA
278
A
LEU
279
n
278
LEU
279
A
HIS
280
n
279
HIS
280
A
ALA
281
n
280
ALA
281
A
THR
282
n
281
THR
282
A
MET
283
n
282
MET
283
A
LEU
284
n
283
LEU
284
A
ARG
285
n
284
ARG
285
A
LEU
286
n
285
LEU
286
A
TYR
287
n
286
TYR
287
A
HIS
288
n
287
HIS
288
A
PRO
289
n
288
PRO
289
A
ILE
290
n
289
ILE
290
A
SER
291
n
290
SER
291
A
GLY
292
n
291
GLY
292
A
ILE
293
n
292
ILE
293
A
GLU
294
n
293
GLU
294
A
MET
295
n
294
MET
295
A
GLU
296
n
295
GLU
296
A
TRP
297
n
296
TRP
297
A
HIS
298
n
297
HIS
298
A
ALA
299
n
298
ALA
299
A
PRO
300
n
299
PRO
300
A
ILE
301
n
300
ILE
301
A
PRO
302
n
301
PRO
302
A
GLN
303
n
302
GLN
303
A
ASP
304
n
303
ASP
304
A
MET
305
n
304
MET
305
A
VAL
306
n
305
VAL
306
A
GLU
307
n
306
GLU
307
A
LEU
308
n
307
LEU
308
A
ILE
309
n
308
ILE
309
A
GLU
310
n
309
GLU
310
A
VAL
311
n
310
VAL
311
A
MET
312
n
311
MET
312
A
ARG
313
n
312
ARG
313
A
ALA
314
n
313
ALA
314
A
ASP
315
n
314
ASP
315
A
PHE
316
n
315
PHE
316
A
GLU
317
n
316
GLU
317
A
GLU
318
n
317
GLU
318
A
HIS
319
n
318
HIS
319
A
LYS
320
n
319
LYS
320
A
ASP
321
n
320
ASP
321
A
GLU
322
n
321
GLU
322
A
VAL
323
n
322
VAL
323
A
ASP
324
n
323
ASP
324
A
TRP
325
n
324
TRP
325
A
LEU
326
n
325
LEU
326
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
TYR
88
A
N
TYR
87
A
O
ILE
95
A
O
ILE
94
A
N
LYS
98
A
N
LYS
97
A
O
GLY
144
A
O
GLY
143
A
N
THR
143
A
N
THR
142
A
O
ALA
281
A
O
ALA
280
A
O
HIS
280
A
O
HIS
279
A
N
GLU
172
A
N
GLU
171
A
N
TYR
171
A
N
TYR
170
A
O
LEU
226
A
O
LEU
225
A
O
ARG
227
A
O
ARG
226
A
N
HIS
211
A
N
HIS
210
A
O
THR
210
A
O
THR
209
A
N
VAL
185
A
N
VAL
184
A
N
TYR
88
A
N
TYR
87
A
O
ILE
95
A
O
ILE
94
A
N
LYS
98
A
N
LYS
97
A
O
GLY
144
A
O
GLY
143
A
N
THR
143
A
N
THR
142
A
O
ALA
281
A
O
ALA
280
A
N
LEU
286
A
N
LEU
285
A
O
MET
295
A
O
MET
294
A
N
SER
190
A
N
SER
189
A
O
ALA
200
A
O
ALA
199
1
A
ALA
2
A
ALA
1
1
Y
1
A
GLN
3
A
GLN
2
1
Y
1
A
ARG
4
A
ARG
3
1
Y
1
A
VAL
5
A
VAL
4
1
Y
1
A
GLN
6
A
GLN
5
1
Y
1
A
LEU
7
A
LEU
6
1
Y
1
A
THR
8
A
THR
7
1
Y
1
A
ALA
9
A
ALA
8
1
Y
1
A
THR
10
A
THR
9
1
Y
1
A
VAL
11
A
VAL
10
1
Y
1
A
SER
12
A
SER
11
1
Y
1
A
GLU
13
A
GLU
12
1
Y
1
A
ASN
14
A
ASN
13
1
Y
1
A
GLN
15
A
GLN
14
1
Y
1
A
LEU
16
A
LEU
15
1
Y
1
A
GLY
17
A
GLY
16
1
Y
1
A
GLN
18
A
GLN
17
1
Y
1
A
ARG
19
A
ARG
18
1
Y
1
A
LEU
20
A
LEU
19
1
Y
1
A
ASP
21
A
ASP
20
1
Y
1
A
GLN
22
A
GLN
21
1
Y
1
A
ALA
23
A
ALA
22
1
Y
1
A
LEU
24
A
LEU
23
1
Y
1
A
ALA
25
A
ALA
24
1
Y
1
A
GLU
26
A
GLU
25
1
Y
1
A
MET
27
A
MET
26
1
Y
1
A
PHE
28
A
PHE
27
1
Y
1
A
PRO
29
A
PRO
28
1
Y
1
A
ASP
30
A
ASP
29
1
Y
1
A
TYR
31
A
TYR
30
1
Y
1
A
SER
32
A
SER
31
1
Y
1
A
ARG
33
A
ARG
32
1
Y
1
A
SER
34
A
SER
33
1
Y
1
A
ARG
35
A
ARG
34
1
Y
1
A
ILE
36
A
ILE
35
1
Y
1
A
LYS
37
A
LYS
36
1
Y
1
A
GLU
38
A
GLU
37
1
Y
1
A
TRP
39
A
TRP
38
1
Y
1
A
ILE
40
A
ILE
39
1
Y
1
A
LEU
41
A
LEU
40
1
Y
1
A
ASP
42
A
ASP
41
1
Y
1
A
GLN
43
A
GLN
42
1
Y
1
A
ARG
44
A
ARG
43
1
Y
1
A
VAL
45
A
VAL
44
1
Y
1
A
LEU
46
A
LEU
45
1
Y
1
A
VAL
47
A
VAL
46
1
Y
1
A
ASN
48
A
ASN
47
1
Y
1
A
GLY
49
A
GLY
48
1
Y
1
A
LYS
50
A
LYS
49
1
Y
1
A
VAL
51
A
VAL
50
1
Y
1
A
CYS
52
A
CYS
51
1
Y
1
A
ASP
53
A
ASP
52
1
Y
1
A
LYS
54
A
LYS
53
1
Y
1
A
PRO
55
A
PRO
54
1
Y
1
A
LYS
56
A
LYS
55
1
Y
1
A
GLU
57
A
GLU
56
1
Y
1
A
LYS
58
A
LYS
57
1
Y
1
A
VAL
59
A
VAL
58
1
Y
1
A
LEU
60
A
LEU
59
1
Y
1
A
GLY
61
A
GLY
60
1
Y
1
A
GLY
62
A
GLY
61
1
Y
1
A
GLU
63
A
GLU
62
1
Y
1
A
GLN
64
A
GLN
63
1
Y
1
A
VAL
65
A
VAL
64
1
Y
1
A
ALA
66
A
ALA
65
1
Y
1
A
ILE
67
A
ILE
66
1
Y
1
A
ASN
68
A
ASN
67
1
Y
1
A
ALA
69
A
ALA
68
1
Y
1
A
GLU
70
A
GLU
69
1
Y
1
A
ILE
71
A
ILE
70
1
Y
1
A
GLU
72
A
GLU
71
1
Y
1
A
GLU
73
A
GLU
72
1
Y
1
A
GLU
74
A
GLU
73
1
Y
1
A
ALA
75
A
ALA
74
1
Y
1
A
ARG
76
A
ARG
75
1
Y
1
5.49
0.90
118.30
123.79
A
A
A
CB
CG
OD2
ASP
ASP
ASP
315
315
315
N
1
A
ASP
90
-129.49
-157.65
24.607
0.42
0.21
0.00
0.42
0.00
-0.63
0.948
0.936
0.2242
0.1997
0.20094
1.70
29.49
2406
47799
5.0
100.00
1.568
0.053
RANDOM
1
THROUGHOUT
0
MAD
0.087
0.087
0.80
0.80
1.40
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
1.70
29.49
264
2276
5
0
2007
0.013
0.021
2065
1.452
1.948
2810
6.171
5.000
249
0.129
0.200
311
0.006
0.020
1585
0.203
0.200
1001
0.121
0.200
188
0.221
0.200
32
0.183
0.200
18
0.735
1.500
1256
1.366
2.000
2055
2.439
3.000
809
3.964
4.500
755
0.223
0.205
1.747
149
2600
20
1.7
30
1V9F
47799
0.058
1
18.1
15.9
98.7
0.241
1.7
1.76
47799
91.0
refinement
REFMAC
5.1.19
data reduction
HKL-2000
data scaling
SCALEPACK
phasing
SOLVE
Crystal structure of catalytic domain of pseudouridine synthase RluD from Escherichia coli
1
N
N
2
N
N
3
N
N
A
THR
114
A
THR
113
HELX_P
A
TYR
123
A
TYR
122
1
1
10
A
PRO
124
A
PRO
123
HELX_P
A
ILE
134
A
ILE
133
5
2
11
A
THR
151
A
THR
150
HELX_P
A
ARG
164
A
ARG
163
1
3
14
A
HIS
234
A
HIS
233
HELX_P
A
ILE
243
A
ILE
242
1
4
10
A
SER
264
A
SER
263
HELX_P
A
PHE
274
A
PHE
273
1
5
11
A
PRO
302
A
PRO
301
HELX_P
A
ASP
324
A
ASP
323
1
6
23
LYASE
Pseudouridine synthase, RNA binding, LYASE
RLUD_ECOLI
UNP
1
1
P33643
AQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQRVLVNGKVCDKPKEKVLGGEQVAINAEIEEEARFEPQD
IPLDIVYEDEDIIIINKPRDLVVHPGAGNPDGTVLNALLHYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVES
LQRREITREYEAVAIGHMTAGGTVDEPISRHPTKRTHMAVHPMGKPAVTHYRIMEHFRVHTRLRLRLETGRTHQIRVHMA
HITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDRQALHATMLRLYHPISGIEMEWHAPIPQDMVELIEVMRADFEEHKD
EVDWL
1
325
1V9F
2
326
P33643
A
1
1
325
8
5
2
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
A
ILE
86
A
ILE
85
A
GLU
89
A
GLU
88
A
ILE
93
A
ILE
92
A
LYS
98
A
LYS
97
A
THR
143
A
THR
142
A
ALA
149
A
ALA
148
A
LEU
279
A
LEU
278
A
TYR
287
A
TYR
286
A
THR
168
A
THR
167
A
ILE
176
A
ILE
175
A
HIS
221
A
HIS
220
A
LEU
228
A
LEU
227
A
VAL
209
A
VAL
208
A
HIS
217
A
HIS
216
A
GLY
183
A
GLY
182
A
ASP
186
A
ASP
185
A
ILE
86
A
ILE
85
A
GLU
89
A
GLU
88
A
ILE
93
A
ILE
92
A
LYS
98
A
LYS
97
A
THR
143
A
THR
142
A
ALA
149
A
ALA
148
A
LEU
279
A
LEU
278
A
TYR
287
A
TYR
286
A
GLU
294
A
GLU
293
A
HIS
298
A
HIS
297
A
ILE
189
A
ILE
188
A
ARG
191
A
ARG
190
A
MET
199
A
MET
198
A
VAL
201
A
VAL
200
BINDING SITE FOR RESIDUE PO4 A 400
A
PO4
400
Software
12
A
ASP
139
A
ASP
138
12
1_555
A
LYS
140
A
LYS
139
12
1_555
A
HIS
234
A
HIS
233
12
1_555
A
ARG
237
A
ARG
236
12
1_555
A
HOH
409
C
HOH
12
1_555
A
HOH
412
C
HOH
12
1_555
A
HOH
425
C
HOH
12
1_555
A
HOH
437
C
HOH
12
1_555
A
HOH
444
C
HOH
12
1_555
A
HOH
462
C
HOH
12
1_555
A
HOH
483
C
HOH
12
1_555
A
HOH
513
C
HOH
12
1_555
179
P 65 2 2