0.010613
0.006128
0.000000
0.000000
0.012255
0.000000
0.000000
0.000000
0.006846
0.00000
0.00000
0.00000
Ishijima, J.
Yutani, K.
RIKEN Structural Genomics/Proteomics Initiative (RSGI)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
94.221
94.221
146.078
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C21 H27 N7 O14 P2
663.425
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
S
P
N
251
N
O
N
252
N
O
N
253
N
O
N
254
N
C
N
255
R
C
N
256
N
O
N
257
S
C
N
258
N
O
N
259
R
C
N
260
N
O
N
261
R
C
Y
262
N
N
Y
263
N
C
Y
264
N
N
Y
265
N
C
Y
266
N
C
N
267
N
N
Y
268
N
N
Y
269
N
C
Y
270
N
N
Y
271
N
C
N
272
N
O
N
273
N
P
N
274
N
O
N
275
N
O
N
276
N
O
N
277
N
C
N
278
R
C
N
279
N
O
N
280
S
C
N
281
N
O
N
282
R
C
N
283
N
O
N
284
R
C
Y
285
N
N
Y
286
N
C
Y
287
N
C
N
288
N
C
N
289
N
O
N
290
N
N
Y
291
N
C
Y
292
N
C
Y
293
N
C
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
C
Y
330
N
C
Y
331
N
C
N
332
N
O
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
N
N
345
S
C
N
346
N
C
N
347
N
O
N
348
N
C
N
349
N
C
N
350
N
C
N
351
N
O
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
N
N
362
S
C
N
363
N
C
N
364
N
O
N
365
N
C
N
366
N
O
N
367
N
O
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
N
N
376
S
C
N
377
N
C
N
378
N
O
N
379
R
C
N
380
N
O
N
381
N
C
N
382
N
O
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
N
N
393
S
C
N
394
N
C
N
395
N
O
N
396
N
C
Y
397
N
C
Y
398
N
C
Y
399
N
C
Y
400
N
N
Y
401
N
C
Y
402
N
C
Y
403
N
C
Y
404
N
C
Y
405
N
C
N
406
N
O
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
N
N
420
S
C
N
421
N
C
N
422
N
O
N
423
N
C
Y
424
N
C
Y
425
N
C
Y
426
N
C
Y
427
N
C
Y
428
N
C
Y
429
N
C
N
430
N
O
N
431
N
O
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
N
N
444
S
C
N
445
N
C
N
446
N
O
N
447
N
C
N
448
N
C
N
449
N
C
N
450
N
O
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
doub
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
Y
260
N
sing
Y
261
N
sing
Y
262
N
doub
N
263
N
sing
Y
264
N
sing
Y
265
N
sing
Y
266
N
doub
N
267
N
sing
Y
268
N
doub
N
269
N
sing
N
270
N
sing
Y
271
N
sing
Y
272
N
doub
N
273
N
sing
Y
274
N
sing
N
275
N
sing
N
276
N
doub
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
Y
297
N
sing
Y
298
N
doub
Y
299
N
doub
N
300
N
sing
N
301
N
sing
Y
302
N
sing
N
303
N
doub
N
304
N
sing
N
305
N
sing
N
306
N
sing
Y
307
N
doub
N
308
N
sing
Y
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
doub
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
Y
323
N
doub
Y
324
N
sing
Y
325
N
sing
N
326
N
sing
Y
327
N
doub
N
328
N
sing
Y
329
N
doub
N
330
N
sing
Y
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
doub
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
doub
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
doub
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
doub
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
Y
392
N
doub
Y
393
N
sing
Y
394
N
sing
N
395
N
sing
Y
396
N
doub
Y
397
N
sing
Y
398
N
sing
N
399
N
sing
Y
400
N
sing
Y
401
N
doub
N
402
N
sing
Y
403
N
doub
N
404
N
sing
Y
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
doub
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
Y
420
N
doub
Y
421
N
sing
Y
422
N
sing
N
423
N
sing
Y
424
N
doub
N
425
N
sing
Y
426
N
doub
N
427
N
sing
Y
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
N
439
N
doub
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
To be Published
0353
Crystal structure of the Glyceraldehyde 3-Phosphate Dehydrogenase from Thermus thermophilus HB8
10.2210/pdb1vc2/pdb
pdb_00001vc2
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2003-05-28
RIGAKU JUPITER 210
mirror
SINGLE WAVELENGTH
M
x-ray
1
1.0
1.0
BL26B1
SPring-8
1.0
SYNCHROTRON
SPRING-8 BEAMLINE BL26B1
35944.320
Glyceraldehyde 3-Phosphate Dehydrogenase
1.2.1.12
1
man
polymer
663.425
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
1
syn
non-polymer
18.015
water
33
nat
water
no
no
MKVGINGFGRIGRQVFRILHERGVEVALINDLTDNKTLAHLLKYDSTYGRFPGAVGYDEENLYVDGKAIRATAIKDPREI
PWKQAGVGVVVESTGVFTDGEKARAHLEAGAKKVIITAPAKNEDITVVLGVNHEQYDPAKHHILSNASCTTNSLAPVMKV
LEKAFGVEKALMTTVHSYTNDQRLLDLPHKDLRRARAAALNIIPTTTGAAKATALVLPSLKGRFDGMALRVPTPTGSISD
ITALLKREVTAEEVNAALKAAAEGPLKGILAYTEDEIVLRDIVMDPHSSIVDGKLTKAIGNLVKVFAWYDNEWGYANRVA
DLVELVLKKGV
MKVGINGFGRIGRQVFRILHERGVEVALINDLTDNKTLAHLLKYDSTYGRFPGAVGYDEENLYVDGKAIRATAIKDPREI
PWKQAGVGVVVESTGVFTDGEKARAHLEAGAKKVIITAPAKNEDITVVLGVNHEQYDPAKHHILSNASCTTNSLAPVMKV
LEKAFGVEKALMTTVHSYTNDQRLLDLPHKDLRRARAAALNIIPTTTGAAKATALVLPSLKGRFDGMALRVPTPTGSISD
ITALLKREVTAEEVNAALKAAAEGPLKGILAYTEDEIVLRDIVMDPHSSIVDGKLTKAIGNLVKVFAWYDNEWGYANRVA
DLVELVLKKGV
A
ttk003000466.1
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Thermus
Escherichia
sample
274
Thermus thermophilus
562
Escherichia coli
PLASMID
pET11a
1
2.57
51.68
MICROBATCH
5.0
PEG 4000, pH 5.0, Microbatch, temperature 291K
291
RIKEN Structural Genomics/Proteomics Initiative
RSGI
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_site
repository
Initial release
Version format compliance
Derived calculations
Version format compliance
Data collection
Database references
Derived calculations
Refinement description
1
0
2004-03-16
1
1
2008-04-27
1
2
2011-07-13
1
3
2023-10-25
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
PDBJ
Y
PDBJ
2004-03-04
REL
REL
NAD
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
HOH
water
1CER
PDB ENTRY 1CER
PDB
experimental model
NAD
336
2
NAD
NAD
336
A
TIP
501
3
HOH
HOH
501
A
TIP
502
3
HOH
HOH
502
A
TIP
503
3
HOH
HOH
503
A
TIP
504
3
HOH
HOH
504
A
TIP
505
3
HOH
HOH
505
A
TIP
506
3
HOH
HOH
506
A
TIP
507
3
HOH
HOH
507
A
TIP
508
3
HOH
HOH
508
A
TIP
509
3
HOH
HOH
509
A
TIP
510
3
HOH
HOH
510
A
TIP
511
3
HOH
HOH
511
A
TIP
512
3
HOH
HOH
512
A
TIP
513
3
HOH
HOH
513
A
TIP
514
3
HOH
HOH
514
A
TIP
515
3
HOH
HOH
515
A
TIP
516
3
HOH
HOH
516
A
TIP
517
3
HOH
HOH
517
A
TIP
518
3
HOH
HOH
518
A
TIP
519
3
HOH
HOH
519
A
TIP
520
3
HOH
HOH
520
A
TIP
521
3
HOH
HOH
521
A
TIP
522
3
HOH
HOH
522
A
TIP
523
3
HOH
HOH
523
A
TIP
524
3
HOH
HOH
524
A
TIP
525
3
HOH
HOH
525
A
TIP
526
3
HOH
HOH
526
A
TIP
527
3
HOH
HOH
527
A
TIP
528
3
HOH
HOH
528
A
TIP
529
3
HOH
HOH
529
A
TIP
530
3
HOH
HOH
530
A
TIP
531
3
HOH
HOH
531
A
TIP
532
3
HOH
HOH
532
A
TIP
533
3
HOH
HOH
533
A
MET
1
n
1
MET
1
A
LYS
2
n
2
LYS
2
A
VAL
3
n
3
VAL
3
A
GLY
4
n
4
GLY
4
A
ILE
5
n
5
ILE
5
A
ASN
6
n
6
ASN
6
A
GLY
7
n
7
GLY
7
A
PHE
8
n
8
PHE
8
A
GLY
9
n
9
GLY
9
A
ARG
10
n
10
ARG
10
A
ILE
11
n
11
ILE
11
A
GLY
12
n
12
GLY
12
A
ARG
13
n
13
ARG
13
A
GLN
14
n
14
GLN
14
A
VAL
15
n
15
VAL
15
A
PHE
16
n
16
PHE
16
A
ARG
17
n
17
ARG
17
A
ILE
18
n
18
ILE
18
A
LEU
19
n
19
LEU
19
A
HIS
20
n
20
HIS
20
A
GLU
21
n
21
GLU
21
A
ARG
22
n
22
ARG
22
A
GLY
23
n
23
GLY
23
A
VAL
24
n
24
VAL
24
A
GLU
25
n
25
GLU
25
A
VAL
26
n
26
VAL
26
A
ALA
27
n
27
ALA
27
A
LEU
28
n
28
LEU
28
A
ILE
29
n
29
ILE
29
A
ASN
30
n
30
ASN
30
A
ASP
31
n
31
ASP
31
A
LEU
32
n
32
LEU
32
A
THR
33
n
33
THR
33
A
ASP
34
n
34
ASP
34
A
ASN
35
n
35
ASN
35
A
LYS
36
n
36
LYS
36
A
THR
37
n
37
THR
37
A
LEU
38
n
38
LEU
38
A
ALA
39
n
39
ALA
39
A
HIS
40
n
40
HIS
40
A
LEU
41
n
41
LEU
41
A
LEU
42
n
42
LEU
42
A
LYS
43
n
43
LYS
43
A
TYR
44
n
44
TYR
44
A
ASP
45
n
45
ASP
45
A
SER
46
n
46
SER
46
A
THR
47
n
47
THR
47
A
TYR
48
n
48
TYR
48
A
GLY
49
n
49
GLY
49
A
ARG
50
n
50
ARG
50
A
PHE
51
n
51
PHE
51
A
PRO
52
n
52
PRO
52
A
GLY
53
n
53
GLY
53
A
ALA
54
n
54
ALA
54
A
VAL
55
n
55
VAL
55
A
GLY
56
n
56
GLY
56
A
TYR
57
n
57
TYR
57
A
ASP
58
n
58
ASP
58
A
GLU
59
n
59
GLU
59
A
GLU
60
n
60
GLU
60
A
ASN
61
n
61
ASN
61
A
LEU
62
n
62
LEU
62
A
TYR
63
n
63
TYR
63
A
VAL
64
n
64
VAL
64
A
ASP
65
n
65
ASP
65
A
GLY
66
n
66
GLY
66
A
LYS
67
n
67
LYS
67
A
ALA
68
n
68
ALA
68
A
ILE
69
n
69
ILE
69
A
ARG
70
n
70
ARG
70
A
ALA
71
n
71
ALA
71
A
THR
72
n
72
THR
72
A
ALA
73
n
73
ALA
73
A
ILE
74
n
74
ILE
74
A
LYS
75
n
75
LYS
75
A
ASP
76
n
76
ASP
76
A
PRO
77
n
77
PRO
77
A
ARG
78
n
78
ARG
78
A
GLU
79
n
79
GLU
79
A
ILE
80
n
80
ILE
80
A
PRO
81
n
81
PRO
81
A
TRP
82
n
82
TRP
82
A
LYS
83
n
83
LYS
83
A
GLN
84
n
84
GLN
84
A
ALA
85
n
85
ALA
85
A
GLY
86
n
86
GLY
86
A
VAL
87
n
87
VAL
87
A
GLY
88
n
88
GLY
88
A
VAL
89
n
89
VAL
89
A
VAL
90
n
90
VAL
90
A
VAL
91
n
91
VAL
91
A
GLU
92
n
92
GLU
92
A
SER
93
n
93
SER
93
A
THR
94
n
94
THR
94
A
GLY
95
n
95
GLY
95
A
VAL
96
n
96
VAL
96
A
PHE
97
n
97
PHE
97
A
THR
98
n
98
THR
98
A
ASP
99
n
99
ASP
99
A
GLY
100
n
100
GLY
100
A
GLU
101
n
101
GLU
101
A
LYS
102
n
102
LYS
102
A
ALA
103
n
103
ALA
103
A
ARG
104
n
104
ARG
104
A
ALA
105
n
105
ALA
105
A
HIS
106
n
106
HIS
106
A
LEU
107
n
107
LEU
107
A
GLU
108
n
108
GLU
108
A
ALA
109
n
109
ALA
109
A
GLY
110
n
110
GLY
110
A
ALA
111
n
111
ALA
111
A
LYS
112
n
112
LYS
112
A
LYS
113
n
113
LYS
113
A
VAL
114
n
114
VAL
114
A
ILE
115
n
115
ILE
115
A
ILE
116
n
116
ILE
116
A
THR
117
n
117
THR
117
A
ALA
118
n
118
ALA
118
A
PRO
119
n
119
PRO
119
A
ALA
120
n
120
ALA
120
A
LYS
121
n
121
LYS
121
A
ASN
122
n
122
ASN
122
A
GLU
123
n
123
GLU
123
A
ASP
124
n
124
ASP
124
A
ILE
125
n
125
ILE
125
A
THR
126
n
126
THR
126
A
VAL
127
n
127
VAL
127
A
VAL
128
n
128
VAL
128
A
LEU
129
n
129
LEU
129
A
GLY
130
n
130
GLY
130
A
VAL
131
n
131
VAL
131
A
ASN
132
n
132
ASN
132
A
HIS
133
n
133
HIS
133
A
GLU
134
n
134
GLU
134
A
GLN
135
n
135
GLN
135
A
TYR
136
n
136
TYR
136
A
ASP
137
n
137
ASP
137
A
PRO
138
n
138
PRO
138
A
ALA
139
n
139
ALA
139
A
LYS
140
n
140
LYS
140
A
HIS
141
n
141
HIS
141
A
HIS
142
n
142
HIS
142
A
ILE
143
n
143
ILE
143
A
LEU
144
n
144
LEU
144
A
SER
145
n
145
SER
145
A
ASN
146
n
146
ASN
146
A
ALA
147
n
147
ALA
147
A
SER
148
n
148
SER
148
A
CYS
149
n
149
CYS
149
A
THR
150
n
150
THR
150
A
THR
151
n
151
THR
151
A
ASN
152
n
152
ASN
152
A
SER
153
n
153
SER
153
A
LEU
154
n
154
LEU
154
A
ALA
155
n
155
ALA
155
A
PRO
156
n
156
PRO
156
A
VAL
157
n
157
VAL
157
A
MET
158
n
158
MET
158
A
LYS
159
n
159
LYS
159
A
VAL
160
n
160
VAL
160
A
LEU
161
n
161
LEU
161
A
GLU
162
n
162
GLU
162
A
LYS
163
n
163
LYS
163
A
ALA
164
n
164
ALA
164
A
PHE
165
n
165
PHE
165
A
GLY
166
n
166
GLY
166
A
VAL
167
n
167
VAL
167
A
GLU
168
n
168
GLU
168
A
LYS
169
n
169
LYS
169
A
ALA
170
n
170
ALA
170
A
LEU
171
n
171
LEU
171
A
MET
172
n
172
MET
172
A
THR
173
n
173
THR
173
A
THR
174
n
174
THR
174
A
VAL
175
n
175
VAL
175
A
HIS
176
n
176
HIS
176
A
SER
177
n
177
SER
177
A
TYR
178
n
178
TYR
178
A
THR
179
n
179
THR
179
A
ASN
180
n
180
ASN
180
A
ASP
181
n
181
ASP
181
A
GLN
182
n
182
GLN
182
A
ARG
183
n
183
ARG
183
A
LEU
184
n
184
LEU
184
A
LEU
185
n
185
LEU
185
A
ASP
186
n
186
ASP
186
A
LEU
187
n
187
LEU
187
A
PRO
188
n
188
PRO
188
A
HIS
189
n
189
HIS
189
A
LYS
190
n
190
LYS
190
A
ASP
191
n
191
ASP
191
A
LEU
192
n
192
LEU
192
A
ARG
193
n
193
ARG
193
A
ARG
194
n
194
ARG
194
A
ALA
195
n
195
ALA
195
A
ARG
196
n
196
ARG
196
A
ALA
197
n
197
ALA
197
A
ALA
198
n
198
ALA
198
A
ALA
199
n
199
ALA
199
A
LEU
200
n
200
LEU
200
A
ASN
201
n
201
ASN
201
A
ILE
202
n
202
ILE
202
A
ILE
203
n
203
ILE
203
A
PRO
204
n
204
PRO
204
A
THR
205
n
205
THR
205
A
THR
206
n
206
THR
206
A
THR
207
n
207
THR
207
A
GLY
208
n
208
GLY
208
A
ALA
209
n
209
ALA
209
A
ALA
210
n
210
ALA
210
A
LYS
211
n
211
LYS
211
A
ALA
212
n
212
ALA
212
A
THR
213
n
213
THR
213
A
ALA
214
n
214
ALA
214
A
LEU
215
n
215
LEU
215
A
VAL
216
n
216
VAL
216
A
LEU
217
n
217
LEU
217
A
PRO
218
n
218
PRO
218
A
SER
219
n
219
SER
219
A
LEU
220
n
220
LEU
220
A
LYS
221
n
221
LYS
221
A
GLY
222
n
222
GLY
222
A
ARG
223
n
223
ARG
223
A
PHE
224
n
224
PHE
224
A
ASP
225
n
225
ASP
225
A
GLY
226
n
226
GLY
226
A
MET
227
n
227
MET
227
A
ALA
228
n
228
ALA
228
A
LEU
229
n
229
LEU
229
A
ARG
230
n
230
ARG
230
A
VAL
231
n
231
VAL
231
A
PRO
232
n
232
PRO
232
A
THR
233
n
233
THR
233
A
PRO
234
n
234
PRO
234
A
THR
235
n
235
THR
235
A
GLY
236
n
236
GLY
236
A
SER
237
n
237
SER
237
A
ILE
238
n
238
ILE
238
A
SER
239
n
239
SER
239
A
ASP
240
n
240
ASP
240
A
ILE
241
n
241
ILE
241
A
THR
242
n
242
THR
242
A
ALA
243
n
243
ALA
243
A
LEU
244
n
244
LEU
244
A
LEU
245
n
245
LEU
245
A
LYS
246
n
246
LYS
246
A
ARG
247
n
247
ARG
247
A
GLU
248
n
248
GLU
248
A
VAL
249
n
249
VAL
249
A
THR
250
n
250
THR
250
A
ALA
251
n
251
ALA
251
A
GLU
252
n
252
GLU
252
A
GLU
253
n
253
GLU
253
A
VAL
254
n
254
VAL
254
A
ASN
255
n
255
ASN
255
A
ALA
256
n
256
ALA
256
A
ALA
257
n
257
ALA
257
A
LEU
258
n
258
LEU
258
A
LYS
259
n
259
LYS
259
A
ALA
260
n
260
ALA
260
A
ALA
261
n
261
ALA
261
A
ALA
262
n
262
ALA
262
A
GLU
263
n
263
GLU
263
A
GLY
264
n
264
GLY
264
A
PRO
265
n
265
PRO
265
A
LEU
266
n
266
LEU
266
A
LYS
267
n
267
LYS
267
A
GLY
268
n
268
GLY
268
A
ILE
269
n
269
ILE
269
A
LEU
270
n
270
LEU
270
A
ALA
271
n
271
ALA
271
A
TYR
272
n
272
TYR
272
A
THR
273
n
273
THR
273
A
GLU
274
n
274
GLU
274
A
ASP
275
n
275
ASP
275
A
GLU
276
n
276
GLU
276
A
ILE
277
n
277
ILE
277
A
VAL
278
n
278
VAL
278
A
LEU
279
n
279
LEU
279
A
ARG
280
n
280
ARG
280
A
ASP
281
n
281
ASP
281
A
ILE
282
n
282
ILE
282
A
VAL
283
n
283
VAL
283
A
MET
284
n
284
MET
284
A
ASP
285
n
285
ASP
285
A
PRO
286
n
286
PRO
286
A
HIS
287
n
287
HIS
287
A
SER
288
n
288
SER
288
A
SER
289
n
289
SER
289
A
ILE
290
n
290
ILE
290
A
VAL
291
n
291
VAL
291
A
ASP
292
n
292
ASP
292
A
GLY
293
n
293
GLY
293
A
LYS
294
n
294
LYS
294
A
LEU
295
n
295
LEU
295
A
THR
296
n
296
THR
296
A
LYS
297
n
297
LYS
297
A
ALA
298
n
298
ALA
298
A
ILE
299
n
299
ILE
299
A
GLY
300
n
300
GLY
300
A
ASN
301
n
301
ASN
301
A
LEU
302
n
302
LEU
302
A
VAL
303
n
303
VAL
303
A
LYS
304
n
304
LYS
304
A
VAL
305
n
305
VAL
305
A
PHE
306
n
306
PHE
306
A
ALA
307
n
307
ALA
307
A
TRP
308
n
308
TRP
308
A
TYR
309
n
309
TYR
309
A
ASP
310
n
310
ASP
310
A
ASN
311
n
311
ASN
311
A
GLU
312
n
312
GLU
312
A
TRP
313
n
313
TRP
313
A
GLY
314
n
314
GLY
314
A
TYR
315
n
315
TYR
315
A
ALA
316
n
316
ALA
316
A
ASN
317
n
317
ASN
317
A
ARG
318
n
318
ARG
318
A
VAL
319
n
319
VAL
319
A
ALA
320
n
320
ALA
320
A
ASP
321
n
321
ASP
321
A
LEU
322
n
322
LEU
322
A
VAL
323
n
323
VAL
323
A
GLU
324
n
324
GLU
324
A
LEU
325
n
325
LEU
325
A
VAL
326
n
326
VAL
326
A
LEU
327
n
327
LEU
327
A
LYS
328
n
328
LYS
328
A
LYS
329
n
329
LYS
329
A
GLY
330
n
330
GLY
330
A
VAL
331
n
331
VAL
331
A
author_and_software_defined_assembly
PISA,PQS
4
tetrameric
20170
-141
42390
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
4_655
-x+1,-y,z
crystal symmetry operation
94.2210000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
8_554
x-y,-y,-z-1
crystal symmetry operation
0.0000000000
0.0000000000
-146.0780000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
11_654
-x+y+1,y,-z-1
crystal symmetry operation
94.2210000000
0.0000000000
-146.0780000000
A
N
GLY
56
A
N
GLY
56
A
O
TYR
63
A
O
TYR
63
A
N
LEU
62
A
N
LEU
62
A
O
ILE
69
A
O
ILE
69
A
O
ARG
70
A
O
ARG
70
A
N
ILE
29
A
N
ILE
29
A
O
ALA
27
A
O
ALA
27
A
N
VAL
3
A
N
VAL
3
A
N
GLY
4
A
N
GLY
4
A
O
VAL
91
A
O
VAL
91
A
N
VAL
90
A
N
VAL
90
A
O
ILE
115
A
O
ILE
115
A
N
ILE
116
A
N
ILE
116
A
O
LEU
144
A
O
LEU
144
A
O
SER
145
A
O
SER
145
A
N
ILE
125
A
N
ILE
125
A
N
ASP
45
A
N
ASP
45
A
O
GLY
49
A
O
GLY
49
A
N
ILE
203
A
N
ILE
203
A
O
ARG
230
A
O
ARG
230
A
O
LEU
229
A
O
LEU
229
A
N
THR
174
A
N
THR
174
A
N
THR
173
A
N
THR
173
A
O
ASP
240
A
O
ASP
240
A
N
ILE
241
A
N
ILE
241
A
O
VAL
305
A
O
VAL
305
A
O
TRP
308
A
O
TRP
308
A
N
ILE
290
A
N
ILE
290
A
O
VAL
291
A
O
VAL
291
A
N
ALA
271
A
N
ALA
271
A
N
ILE
203
A
N
ILE
203
A
O
ARG
230
A
O
ARG
230
A
O
LEU
229
A
O
LEU
229
A
N
THR
174
A
N
THR
174
A
N
THR
173
A
N
THR
173
A
O
ASP
240
A
O
ASP
240
A
N
ILE
241
A
N
ILE
241
A
O
VAL
305
A
O
VAL
305
A
O
LEU
302
A
O
LEU
302
A
N
ILE
299
A
N
ILE
299
1
A
ILE
202
12.09
1
A
GLU
21
-56.31
-7.73
1
A
PRO
52
-68.42
83.46
1
A
LYS
67
-39.60
121.20
1
A
PRO
81
-60.63
41.84
1
A
GLN
84
-70.54
26.56
1
A
GLU
108
-75.88
41.75
1
A
ALA
109
-159.44
4.36
1
A
ALA
111
-35.87
144.39
1
A
ALA
118
169.52
165.19
1
A
PRO
119
-58.75
108.83
1
A
ASN
132
-151.83
41.77
1
A
GLU
134
-59.40
-8.95
1
A
HIS
142
-151.02
-24.34
1
A
ALA
147
65.97
-144.87
1
A
LYS
163
-81.60
32.78
1
A
ALA
164
-152.45
-50.01
1
A
ASN
180
-57.34
-9.94
1
A
LEU
192
-67.18
7.79
1
A
ARG
194
-66.90
0.37
1
A
PRO
232
-61.56
65.57
1
A
THR
235
-170.56
141.15
1
A
ARG
247
-176.36
139.00
1
A
TYR
309
-172.57
140.25
1
A
ASN
311
-46.17
-13.39
1
A
GLU
312
-104.47
-70.45
PROTEIN_REP.PARAM
PROTEIN.TOP
WATER_REP.PARAM
NAD.TOP
NAD.PARAM
WATER.TOP
62.4
11.91
12.85
0.00
11.91
0.00
-23.82
0.286
0.008
0.225
0.231
0.225
2.60
44.84
1200
11633
11633
10.3
93.9
RANDOM
462446.64
0.000000
1
RESTRAINED
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
PDB ENTRY 1CER
Engh & Huber
FLAT MODEL
38.0101
0.313972
0.49
0.38
5.00
0.49
0.46
2.60
44.84
33
2606
44
0
2529
0.008
1.4
24.1
0.93
1.30
1.50
2.23
2.00
1.61
2.00
2.50
2.50
0.39
0.030
0.344
2.76
165
1597
1762
6
9.4
87.7
53.1
2.6
50
1VC2
12645
12645
0
0
0.092
1
11.3
99.8
0.502
2.60
2.69
1.5
1230
1
10.0
99.9
refinement
CNS
1.1
data reduction
HKL-2000
data scaling
SCALEPACK
phasing
CNS
1.1
Crystal structure of Glyceraldehyde 3-Phosphate Dehydrogenase from Thermus thermophilus HB8
1
N
N
2
N
N
3
N
N
The biological assembly is a tetramer
A
GLY
9
A
GLY
9
HELX_P
A
GLY
23
A
GLY
23
1
1
15
A
ASP
34
A
ASP
34
HELX_P
A
LYS
43
A
LYS
43
1
2
10
A
ASP
76
A
ASP
76
HELX_P
A
ILE
80
A
ILE
80
5
3
5
A
ASP
99
A
ASP
99
HELX_P
A
ARG
104
A
ARG
104
1
4
6
A
ALA
105
A
ALA
105
HELX_P
A
GLY
110
A
GLY
110
5
5
6
A
THR
150
A
THR
150
HELX_P
A
LYS
163
A
LYS
163
1
6
14
A
GLY
208
A
GLY
208
HELX_P
A
ALA
214
A
ALA
214
1
7
7
A
LEU
217
A
LEU
217
HELX_P
A
LYS
221
A
LYS
221
5
8
5
A
THR
250
A
THR
250
HELX_P
A
GLY
264
A
GLY
264
1
9
15
A
VAL
278
A
VAL
278
HELX_P
A
ILE
282
A
ILE
282
5
10
5
A
LYS
294
A
LYS
294
HELX_P
A
THR
296
A
THR
296
5
11
3
A
GLU
312
A
GLU
312
HELX_P
A
LYS
329
A
LYS
329
1
12
18
OXIDOREDUCTASE
glyceraldehyde 3-phosphate dehydrogenase, Thermus thermophilus, RIKEN Structural Genomics/Proteomics Initiative, RSGI, Structural Genomics, OXIDOREDUCTASE
P84125_THETH
UNP
1
1
P84125
1
331
1VC2
1
331
P84125
A
1
1
331
9
2
7
6
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
A
VAL
55
A
VAL
55
A
TYR
57
A
TYR
57
A
ASN
61
A
ASN
61
A
VAL
64
A
VAL
64
A
LYS
67
A
LYS
67
A
THR
72
A
THR
72
A
VAL
26
A
VAL
26
A
ASN
30
A
ASN
30
A
LYS
2
A
LYS
2
A
ASN
6
A
ASN
6
A
VAL
87
A
VAL
87
A
GLU
92
A
GLU
92
A
LYS
113
A
LYS
113
A
ILE
116
A
ILE
116
A
ILE
143
A
ILE
143
A
SER
145
A
SER
145
A
ILE
125
A
ILE
125
A
THR
126
A
THR
126
A
TYR
44
A
TYR
44
A
ASP
45
A
ASP
45
A
GLY
49
A
GLY
49
A
ARG
50
A
ARG
50
A
ILE
203
A
ILE
203
A
THR
206
A
THR
206
A
PHE
224
A
PHE
224
A
VAL
231
A
VAL
231
A
VAL
167
A
VAL
167
A
SER
177
A
SER
177
A
SER
237
A
SER
237
A
LEU
245
A
LEU
245
A
LEU
302
A
LEU
302
A
TYR
309
A
TYR
309
A
SER
289
A
SER
289
A
ASP
292
A
ASP
292
A
LEU
270
A
LEU
270
A
THR
273
A
THR
273
A
ILE
203
A
ILE
203
A
THR
206
A
THR
206
A
PHE
224
A
PHE
224
A
VAL
231
A
VAL
231
A
VAL
167
A
VAL
167
A
SER
177
A
SER
177
A
SER
237
A
SER
237
A
LEU
245
A
LEU
245
A
LEU
302
A
LEU
302
A
TYR
309
A
TYR
309
A
LYS
297
A
LYS
297
A
ILE
299
A
ILE
299
BINDING SITE FOR RESIDUE NAD A 336
A
NAD
336
Software
20
A
GLY
7
A
GLY
7
20
1_555
A
GLY
9
A
GLY
9
20
1_555
A
ARG
10
A
ARG
10
20
1_555
A
ILE
11
A
ILE
11
20
1_555
A
ASP
31
A
ASP
31
20
1_555
A
LEU
32
A
LEU
32
20
1_555
A
LYS
75
A
LYS
75
20
1_555
A
SER
93
A
SER
93
20
1_555
A
THR
94
A
THR
94
20
1_555
A
GLY
95
A
GLY
95
20
1_555
A
THR
117
A
THR
117
20
1_555
A
ALA
118
A
ALA
118
20
1_555
A
CYS
149
A
CYS
149
20
1_555
A
THR
179
A
THR
179
20
1_555
A
ASN
180
A
ASN
180
20
1_555
A
LEU
187
A
LEU
187
20
4_655
A
ASN
311
A
ASN
311
20
1_555
A
TYR
315
A
TYR
315
20
1_555
A
HOH
502
C
HOH
20
1_555
A
HOH
522
C
HOH
20
1_555
180
P 62 2 2