0.016669
0.000000
0.000000
0.000000
0.014476
0.000000
0.000000
0.000000
0.014235
0.00000
0.00000
0.00000
Bochkarev, A.
Barwell, J.
Pfuetzner, R.
Furey, W.
Edwards, A.
Frappier, L.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
59.990
69.080
70.250
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
US
Cell(Cambridge,Mass.)
CELLB5
0998
0092-8674
83
39
46
10.1016/0092-8674(95)90232-5
7553871
Crystal structure of the DNA-binding domain of the Epstein-Barr virus origin-binding protein EBNA 1.
1995
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
270
20556
Overexpression, Purification, and Crystallization of the DNA Binding and Dimerization Domains of the Epstein-Barr Virus Nuclear Antigen 1
1995
10.2210/pdb1vhi/pdb
pdb_00001vhi
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
297
1
DOUBLE MIRRORS
IMAGE PLATE
1994-11-07
RIGAKU RAXIS IIC
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RUH2R
15363.729
EPSTEIN BARR VIRUS NUCLEAR ANTIGEN-1
DNA-BINDING AND DIMERIZATION DOMAIN RESIDUES 470 - 607
2
man
polymer
18.015
water
71
nat
water
EBNA1
no
no
GSHMGQGGSNPKFENIAEGLRALLARSHVERTTDEGTWVAGVFVYGGSKTSLYNLRRGTALAIPQCRLTPLSRLPFGMAP
GPGPQPGPLRESIVCYFMVFLQTHIFAEVLKDAIKDLVMTKPAPTCNIRVTVCSFDDGVDLP
GSHMGQGGSNPKFENIAEGLRALLARSHVERTTDEGTWVAGVFVYGGSKTSLYNLRRGTALAIPQCRLTPLSRLPFGMAP
GPGPQPGPLRESIVCYFMVFLQTHIFAEVLKDAIKDLVMTKPAPTCNIRVTVCSFDDGVDLP
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Epstein-Barr virus
Lymphocryptovirus
GD1
Escherichia
sample
E2
10376
Human herpesvirus 4
562
Escherichia coli
PET15B
1
2.37
40.
VAPOR DIFFUSION, HANGING DROP
6.0
HANGING DROP VAPOR DIFFUSION, 50 MM MES PH 6.0 AND 100 MM NACL. SEE REFERENCE 1 FOR MORE DETAILS., vapor diffusion - hanging drop
chem_comp_atom
chem_comp_bond
database_2
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
1
0
1996-12-23
1
1
2008-03-24
1
2
2011-07-13
1
3
2024-02-14
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
Y
BNL
1996-10-05
REL
REL
HOH
water
HOH
2
2
HOH
HOH
2
A
HOH
3
2
HOH
HOH
3
A
HOH
5
2
HOH
HOH
5
A
HOH
6
2
HOH
HOH
6
A
HOH
7
2
HOH
HOH
7
A
HOH
8
2
HOH
HOH
8
A
HOH
9
2
HOH
HOH
9
A
HOH
10
2
HOH
HOH
10
A
HOH
12
2
HOH
HOH
12
A
HOH
14
2
HOH
HOH
14
A
HOH
15
2
HOH
HOH
15
A
HOH
16
2
HOH
HOH
16
A
HOH
17
2
HOH
HOH
17
A
HOH
26
2
HOH
HOH
26
A
HOH
27
2
HOH
HOH
27
A
HOH
28
2
HOH
HOH
28
A
HOH
29
2
HOH
HOH
29
A
HOH
30
2
HOH
HOH
30
A
HOH
39
2
HOH
HOH
39
A
HOH
42
2
HOH
HOH
42
A
HOH
43
2
HOH
HOH
43
A
HOH
46
2
HOH
HOH
46
A
HOH
47
2
HOH
HOH
47
A
HOH
48
2
HOH
HOH
48
A
HOH
50
2
HOH
HOH
50
A
HOH
52
2
HOH
HOH
52
A
HOH
53
2
HOH
HOH
53
A
HOH
56
2
HOH
HOH
56
A
HOH
58
2
HOH
HOH
58
A
HOH
59
2
HOH
HOH
59
A
HOH
60
2
HOH
HOH
60
A
HOH
62
2
HOH
HOH
62
A
HOH
64
2
HOH
HOH
64
A
HOH
67
2
HOH
HOH
67
A
HOH
68
2
HOH
HOH
68
A
HOH
69
2
HOH
HOH
69
A
HOH
70
2
HOH
HOH
70
A
HOH
71
2
HOH
HOH
71
A
HOH
1
2
HOH
HOH
1
B
HOH
4
2
HOH
HOH
4
B
HOH
11
2
HOH
HOH
11
B
HOH
13
2
HOH
HOH
13
B
HOH
18
2
HOH
HOH
18
B
HOH
19
2
HOH
HOH
19
B
HOH
20
2
HOH
HOH
20
B
HOH
21
2
HOH
HOH
21
B
HOH
22
2
HOH
HOH
22
B
HOH
23
2
HOH
HOH
23
B
HOH
24
2
HOH
HOH
24
B
HOH
25
2
HOH
HOH
25
B
HOH
31
2
HOH
HOH
31
B
HOH
32
2
HOH
HOH
32
B
HOH
33
2
HOH
HOH
33
B
HOH
34
2
HOH
HOH
34
B
HOH
35
2
HOH
HOH
35
B
HOH
36
2
HOH
HOH
36
B
HOH
37
2
HOH
HOH
37
B
HOH
38
2
HOH
HOH
38
B
HOH
40
2
HOH
HOH
40
B
HOH
41
2
HOH
HOH
41
B
HOH
44
2
HOH
HOH
44
B
HOH
45
2
HOH
HOH
45
B
HOH
49
2
HOH
HOH
49
B
HOH
51
2
HOH
HOH
51
B
HOH
54
2
HOH
HOH
54
B
HOH
55
2
HOH
HOH
55
B
HOH
57
2
HOH
HOH
57
B
HOH
61
2
HOH
HOH
61
B
HOH
63
2
HOH
HOH
63
B
HOH
65
2
HOH
HOH
65
B
HOH
66
2
HOH
HOH
66
B
n
1
466
A
n
2
467
A
n
3
468
A
MET
469
n
4
MET
469
A
GLY
470
n
5
GLY
470
A
GLN
471
n
6
GLN
471
A
GLY
472
n
7
GLY
472
A
GLY
473
n
8
GLY
473
A
SER
474
n
9
SER
474
A
ASN
475
n
10
ASN
475
A
PRO
476
n
11
PRO
476
A
LYS
477
n
12
LYS
477
A
PHE
478
n
13
PHE
478
A
GLU
479
n
14
GLU
479
A
ASN
480
n
15
ASN
480
A
ILE
481
n
16
ILE
481
A
ALA
482
n
17
ALA
482
A
GLU
483
n
18
GLU
483
A
GLY
484
n
19
GLY
484
A
LEU
485
n
20
LEU
485
A
ARG
486
n
21
ARG
486
A
ALA
487
n
22
ALA
487
A
LEU
488
n
23
LEU
488
A
LEU
489
n
24
LEU
489
A
ALA
490
n
25
ALA
490
A
ARG
491
n
26
ARG
491
A
SER
492
n
27
SER
492
A
HIS
493
n
28
HIS
493
A
VAL
494
n
29
VAL
494
A
GLU
495
n
30
GLU
495
A
ARG
496
n
31
ARG
496
A
THR
497
n
32
THR
497
A
THR
498
n
33
THR
498
A
ASP
499
n
34
ASP
499
A
GLU
500
n
35
GLU
500
A
GLY
501
n
36
GLY
501
A
THR
502
n
37
THR
502
A
TRP
503
n
38
TRP
503
A
VAL
504
n
39
VAL
504
A
ALA
505
n
40
ALA
505
A
GLY
506
n
41
GLY
506
A
VAL
507
n
42
VAL
507
A
PHE
508
n
43
PHE
508
A
VAL
509
n
44
VAL
509
A
TYR
510
n
45
TYR
510
A
GLY
511
n
46
GLY
511
A
GLY
512
n
47
GLY
512
A
SER
513
n
48
SER
513
A
LYS
514
n
49
LYS
514
A
THR
515
n
50
THR
515
A
SER
516
n
51
SER
516
A
LEU
517
n
52
LEU
517
A
TYR
518
n
53
TYR
518
A
ASN
519
n
54
ASN
519
A
LEU
520
n
55
LEU
520
A
ARG
521
n
56
ARG
521
A
ARG
522
n
57
ARG
522
A
GLY
523
n
58
GLY
523
A
THR
524
n
59
THR
524
A
ALA
525
n
60
ALA
525
A
LEU
526
n
61
LEU
526
A
ALA
527
n
62
ALA
527
A
ILE
528
n
63
ILE
528
A
PRO
529
n
64
PRO
529
A
GLN
530
n
65
GLN
530
A
CYS
531
n
66
CYS
531
A
ARG
532
n
67
ARG
532
A
LEU
533
n
68
LEU
533
A
THR
534
n
69
THR
534
A
PRO
535
n
70
PRO
535
A
LEU
536
n
71
LEU
536
A
SER
537
n
72
SER
537
A
ARG
538
n
73
ARG
538
A
LEU
539
n
74
LEU
539
A
PRO
540
n
75
PRO
540
A
PHE
541
n
76
PHE
541
A
GLY
542
n
77
GLY
542
A
MET
543
n
78
MET
543
A
ALA
544
n
79
ALA
544
A
PRO
545
n
80
PRO
545
A
GLY
546
n
81
GLY
546
A
PRO
547
n
82
PRO
547
A
GLY
548
n
83
GLY
548
A
PRO
549
n
84
PRO
549
A
GLN
550
n
85
GLN
550
A
PRO
551
n
86
PRO
551
A
GLY
552
n
87
GLY
552
A
PRO
553
n
88
PRO
553
A
LEU
554
n
89
LEU
554
A
ARG
555
n
90
ARG
555
A
GLU
556
n
91
GLU
556
A
SER
557
n
92
SER
557
A
ILE
558
n
93
ILE
558
A
VAL
559
n
94
VAL
559
A
CYS
560
n
95
CYS
560
A
TYR
561
n
96
TYR
561
A
PHE
562
n
97
PHE
562
A
MET
563
n
98
MET
563
A
VAL
564
n
99
VAL
564
A
PHE
565
n
100
PHE
565
A
LEU
566
n
101
LEU
566
A
GLN
567
n
102
GLN
567
A
THR
568
n
103
THR
568
A
HIS
569
n
104
HIS
569
A
ILE
570
n
105
ILE
570
A
PHE
571
n
106
PHE
571
A
ALA
572
n
107
ALA
572
A
GLU
573
n
108
GLU
573
A
VAL
574
n
109
VAL
574
A
LEU
575
n
110
LEU
575
A
LYS
576
n
111
LYS
576
A
ASP
577
n
112
ASP
577
A
ALA
578
n
113
ALA
578
A
ILE
579
n
114
ILE
579
A
LYS
580
n
115
LYS
580
A
ASP
581
n
116
ASP
581
A
LEU
582
n
117
LEU
582
A
VAL
583
n
118
VAL
583
A
MET
584
n
119
MET
584
A
THR
585
n
120
THR
585
A
LYS
586
n
121
LYS
586
A
PRO
587
n
122
PRO
587
A
ALA
588
n
123
ALA
588
A
PRO
589
n
124
PRO
589
A
THR
590
n
125
THR
590
A
CYS
591
n
126
CYS
591
A
ASN
592
n
127
ASN
592
A
ILE
593
n
128
ILE
593
A
ARG
594
n
129
ARG
594
A
VAL
595
n
130
VAL
595
A
THR
596
n
131
THR
596
A
VAL
597
n
132
VAL
597
A
CYS
598
n
133
CYS
598
A
SER
599
n
134
SER
599
A
PHE
600
n
135
PHE
600
A
ASP
601
n
136
ASP
601
A
ASP
602
n
137
ASP
602
A
GLY
603
n
138
GLY
603
A
VAL
604
n
139
VAL
604
A
ASP
605
n
140
ASP
605
A
LEU
606
n
141
LEU
606
A
PRO
607
n
142
PRO
607
A
n
1
466
B
n
2
467
B
n
3
468
B
n
4
469
B
n
5
470
B
n
6
471
B
n
7
472
B
n
8
473
B
n
9
474
B
n
10
475
B
PRO
476
n
11
PRO
476
B
LYS
477
n
12
LYS
477
B
PHE
478
n
13
PHE
478
B
GLU
479
n
14
GLU
479
B
ASN
480
n
15
ASN
480
B
ILE
481
n
16
ILE
481
B
ALA
482
n
17
ALA
482
B
GLU
483
n
18
GLU
483
B
GLY
484
n
19
GLY
484
B
LEU
485
n
20
LEU
485
B
ARG
486
n
21
ARG
486
B
ALA
487
n
22
ALA
487
B
LEU
488
n
23
LEU
488
B
LEU
489
n
24
LEU
489
B
ALA
490
n
25
ALA
490
B
ARG
491
n
26
ARG
491
B
SER
492
n
27
SER
492
B
HIS
493
n
28
HIS
493
B
VAL
494
n
29
VAL
494
B
GLU
495
n
30
GLU
495
B
ARG
496
n
31
ARG
496
B
THR
497
n
32
THR
497
B
THR
498
n
33
THR
498
B
ASP
499
n
34
ASP
499
B
GLU
500
n
35
GLU
500
B
GLY
501
n
36
GLY
501
B
THR
502
n
37
THR
502
B
TRP
503
n
38
TRP
503
B
VAL
504
n
39
VAL
504
B
ALA
505
n
40
ALA
505
B
GLY
506
n
41
GLY
506
B
VAL
507
n
42
VAL
507
B
PHE
508
n
43
PHE
508
B
VAL
509
n
44
VAL
509
B
TYR
510
n
45
TYR
510
B
GLY
511
n
46
GLY
511
B
GLY
512
n
47
GLY
512
B
SER
513
n
48
SER
513
B
LYS
514
n
49
LYS
514
B
THR
515
n
50
THR
515
B
SER
516
n
51
SER
516
B
LEU
517
n
52
LEU
517
B
TYR
518
n
53
TYR
518
B
ASN
519
n
54
ASN
519
B
LEU
520
n
55
LEU
520
B
ARG
521
n
56
ARG
521
B
ARG
522
n
57
ARG
522
B
GLY
523
n
58
GLY
523
B
THR
524
n
59
THR
524
B
ALA
525
n
60
ALA
525
B
LEU
526
n
61
LEU
526
B
ALA
527
n
62
ALA
527
B
ILE
528
n
63
ILE
528
B
PRO
529
n
64
PRO
529
B
GLN
530
n
65
GLN
530
B
CYS
531
n
66
CYS
531
B
ARG
532
n
67
ARG
532
B
LEU
533
n
68
LEU
533
B
THR
534
n
69
THR
534
B
PRO
535
n
70
PRO
535
B
LEU
536
n
71
LEU
536
B
SER
537
n
72
SER
537
B
ARG
538
n
73
ARG
538
B
LEU
539
n
74
LEU
539
B
PRO
540
n
75
PRO
540
B
PHE
541
n
76
PHE
541
B
GLY
542
n
77
GLY
542
B
MET
543
n
78
MET
543
B
ALA
544
n
79
ALA
544
B
PRO
545
n
80
PRO
545
B
GLY
546
n
81
GLY
546
B
PRO
547
n
82
PRO
547
B
GLY
548
n
83
GLY
548
B
PRO
549
n
84
PRO
549
B
GLN
550
n
85
GLN
550
B
PRO
551
n
86
PRO
551
B
GLY
552
n
87
GLY
552
B
PRO
553
n
88
PRO
553
B
LEU
554
n
89
LEU
554
B
ARG
555
n
90
ARG
555
B
GLU
556
n
91
GLU
556
B
SER
557
n
92
SER
557
B
ILE
558
n
93
ILE
558
B
VAL
559
n
94
VAL
559
B
CYS
560
n
95
CYS
560
B
TYR
561
n
96
TYR
561
B
PHE
562
n
97
PHE
562
B
MET
563
n
98
MET
563
B
VAL
564
n
99
VAL
564
B
PHE
565
n
100
PHE
565
B
LEU
566
n
101
LEU
566
B
GLN
567
n
102
GLN
567
B
THR
568
n
103
THR
568
B
HIS
569
n
104
HIS
569
B
ILE
570
n
105
ILE
570
B
PHE
571
n
106
PHE
571
B
ALA
572
n
107
ALA
572
B
GLU
573
n
108
GLU
573
B
VAL
574
n
109
VAL
574
B
LEU
575
n
110
LEU
575
B
LYS
576
n
111
LYS
576
B
ASP
577
n
112
ASP
577
B
ALA
578
n
113
ALA
578
B
ILE
579
n
114
ILE
579
B
LYS
580
n
115
LYS
580
B
ASP
581
n
116
ASP
581
B
LEU
582
n
117
LEU
582
B
VAL
583
n
118
VAL
583
B
MET
584
n
119
MET
584
B
THR
585
n
120
THR
585
B
LYS
586
n
121
LYS
586
B
PRO
587
n
122
PRO
587
B
ALA
588
n
123
ALA
588
B
PRO
589
n
124
PRO
589
B
THR
590
n
125
THR
590
B
CYS
591
n
126
CYS
591
B
ASN
592
n
127
ASN
592
B
ILE
593
n
128
ILE
593
B
ARG
594
n
129
ARG
594
B
VAL
595
n
130
VAL
595
B
THR
596
n
131
THR
596
B
VAL
597
n
132
VAL
597
B
CYS
598
n
133
CYS
598
B
SER
599
n
134
SER
599
B
PHE
600
n
135
PHE
600
B
ASP
601
n
136
ASP
601
B
ASP
602
n
137
ASP
602
B
GLY
603
n
138
GLY
603
B
VAL
604
n
139
VAL
604
B
ASP
605
n
140
ASP
605
B
LEU
606
n
141
LEU
606
B
PRO
607
n
142
PRO
607
B
author_and_software_defined_assembly
PISA
2
dimeric
3820
-19
12310
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
PHE
562
A
O
PHE
97
A
N
VAL
509
A
N
VAL
44
A
O
GLY
506
A
O
GLY
41
A
N
CYS
598
A
N
CYS
133
A
O
SER
599
A
O
SER
134
B
N
SER
599
B
N
SER
134
B
O
ARG
594
B
O
ARG
129
B
N
TYR
510
B
N
TYR
45
B
O
ALA
505
B
O
ALA
40
B
N
LEU
566
B
N
LEU
101
1
A
GLY
466
A
GLY
1
1
Y
1
A
SER
467
A
SER
2
1
Y
1
A
HIS
468
A
HIS
3
1
Y
1
B
GLY
466
B
GLY
1
1
Y
1
B
SER
467
B
SER
2
1
Y
1
B
HIS
468
B
HIS
3
1
Y
1
B
MET
469
B
MET
4
1
Y
1
B
GLY
470
B
GLY
5
1
Y
1
B
GLN
471
B
GLN
6
1
Y
1
B
GLY
472
B
GLY
7
1
Y
1
B
GLY
473
B
GLY
8
1
Y
1
B
SER
474
B
SER
9
1
Y
1
B
ASN
475
B
ASN
10
1
Y
1
A
A
HH
HH11
TYR
ARG
518
522
1.30
1
B
B
HZ2
H1
LYS
HOH
477
23
1.33
1
B
ARG
594
0.103
SIDE CHAIN
1
12.83
1.60
100.20
113.03
A
A
A
CG
SD
CE
MET
MET
MET
469
469
469
N
1
3.04
0.50
120.30
123.34
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
496
496
496
N
1
-3.02
0.50
120.30
117.28
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
496
496
496
N
1
5.48
0.80
106.30
111.78
A
A
A
CD1
CG
CD2
TRP
TRP
TRP
503
503
503
N
1
-5.18
0.80
107.30
102.12
A
A
A
CE2
CD2
CG
TRP
TRP
TRP
503
503
503
N
1
-3.41
0.50
120.30
116.89
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
521
521
521
N
1
3.75
0.50
120.30
124.05
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
522
522
522
N
1
-10.68
1.70
113.30
102.62
A
A
A
CA
CB
CG
MET
MET
MET
543
543
543
N
1
-13.96
1.60
100.20
86.24
A
A
A
CG
SD
CE
MET
MET
MET
543
543
543
N
1
15.03
2.30
115.30
130.33
A
A
A
CA
CB
CG
LEU
LEU
LEU
566
566
566
N
1
-12.95
1.90
110.30
97.35
A
A
A
N
CA
CB
THR
THR
THR
585
585
585
N
1
4.05
0.50
120.30
124.35
A
A
A
NE
CZ
NH1
ARG
ARG
ARG
594
594
594
N
1
-4.39
0.50
120.30
115.91
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
594
594
594
N
1
5.42
0.90
118.30
123.72
A
A
A
CB
CG
OD1
ASP
ASP
ASP
605
605
605
N
1
-5.49
0.90
118.30
112.81
A
A
A
CB
CG
OD2
ASP
ASP
ASP
605
605
605
N
1
5.60
0.80
106.30
111.90
B
B
B
CD1
CG
CD2
TRP
TRP
TRP
503
503
503
N
1
-5.27
0.80
107.30
102.03
B
B
B
CE2
CD2
CG
TRP
TRP
TRP
503
503
503
N
1
-12.48
1.90
110.30
97.82
B
B
B
N
CA
CB
THR
THR
THR
515
515
515
N
1
-4.49
0.50
120.30
115.81
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
522
522
522
N
1
4.07
0.50
120.30
124.37
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
532
532
532
N
1
-3.69
0.50
120.30
116.61
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
555
555
555
N
1
-10.90
1.80
114.00
103.10
B
B
B
CA
CB
SG
CYS
CYS
CYS
560
560
560
N
1
6.31
0.50
120.30
126.61
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
594
594
594
N
1
-4.15
0.50
120.30
116.15
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
594
594
594
N
1
A
A
NE2
CD2
HIS
HIS
493
493
-0.069
0.011
1.373
1.304
N
1
B
B
CG
CD2
HIS
HIS
569
569
0.054
0.009
1.354
1.408
N
1
A
A
HH22
H
ARG
ALA
491
544
1.30
1_555
3_544
1
A
HIS
493
-110.01
60.24
1
A
PRO
535
-45.76
172.43
1
B
PRO
535
-47.81
166.86
1
B
PRO
547
-114.23
-146.73
1
B
PRO
549
-61.49
92.19
1
B
THR
585
-88.01
32.27
PARAM19X.PRO
14.4
0.1790000
0.1790000
2.5
8.
9721
95.5
1
2.
MIRAS
2.5
8.
71
2142
0
0
2071
0.017
3.5
2.0
2.5
2.5
3.0
2.5
35.
1VHI
10110
1.0
0.0800000
1
19.7
8.2
95.9
2.50
2.54
5.5
91.3
phasing
PHASES
model building
X-PLOR
3.0
refinement
X-PLOR
3.0
data reduction
DENZO
data scaling
SCALEPACK
phasing
X-PLOR
3.0
EPSTEIN BARR VIRUS NUCLEAR ANTIGEN-1 DNA-BINDING DOMAIN, RESIDUES 470-607
1
N
N
1
N
N
2
N
N
2
N
N
A
LYS
477
A
LYS
12
HELX_P
A
ARG
491
A
ARG
26
1
1
15
A
LYS
514
A
LYS
49
HELX_P
A
ALA
527
A
ALA
62
1
2
14
A
GLY
552
A
GLY
87
HELX_P
A
LEU
554
A
LEU
89
5
3
3
A
HIS
569
A
HIS
104
HELX_P
A
THR
585
A
THR
120
1
4
17
A
THR
590
A
THR
125
HELX_P
A
ASN
592
A
ASN
127
5
5
3
B
LYS
477
B
LYS
12
HELX_P
B
ARG
491
B
ARG
26
1
6
15
B
LYS
514
B
LYS
49
HELX_P
B
ALA
527
B
ALA
62
1
7
14
B
HIS
569
B
HIS
104
HELX_P
B
THR
585
B
THR
120
1
8
17
B
THR
590
B
THR
125
HELX_P
B
ASN
592
B
ASN
127
5
9
3
NUCLEAR PROTEIN
NUCLEAR PROTEIN, DNA-BINDING, ACTIVATOR, ORIGIN-BINDING PROTEIN
A
ALA
588
A
ALA
123
1
A
PRO
589
A
PRO
124
-1.11
B
ALA
588
B
ALA
123
1
B
PRO
589
B
PRO
124
5.81
EBN1_EBV
UNP
1
1
P03211
MSDEGPGTGPGNGLGEKGDTSGPEGSGGSGPQRRGGDNHGRGRGRGRGRGGGRPGAPGGSGSGPRHRDGVRRPQKRPSCI
GCKGTHGGTGAGAGAGGAGAGGAGAGGGAGAGGGAGGAGGAGGAGAGGGAGAGGGAGGAGGAGAGGGAGAGGGAGGAGAG
GGAGGAGGAGAGGGAGAGGGAGGAGAGGGAGGAGGAGAGGGAGAGGAGGAGGAGAGGAGAGGGAGGAGGAGAGGAGAGGA
GAGGAGAGGAGGAGAGGAGGAGAGGAGGAGAGGGAGGAGAGGGAGGAGAGGAGGAGAGGAGGAGAGGAGGAGAGGGAGAG
GAGAGGGGRGRGGSGGRGRGGSGGRGRGGSGGRRGRGRERARGGSRERARGRGRGRGEKRPRSPSSQSSSSGSPPRRPPP
GRRPFFHPVGEADYFEYHQEGGPDGEPDVPPGAIEQGPADDPGEGPSTGPRGQGDGGRRKKGGWFGKHRGQGGSNPKFEN
IAEGLRALLARSHVERTTDEGTWVAGVFVYGGSKTSLYNLRRGTALAIPQCRLTPLSRLPFGMAPGPGPQPGPLRESIVC
YFMVFLQTHIFAEVLKDAIKDLVMTKPAPTCNIRVTVCSFDDGVDLPPWFPPMVEGAAAEGDDGDDGDEGGDGDEGEEGQ
E
466
607
1VHI
466
607
P03211
A
1
1
142
466
607
1VHI
466
607
P03211
B
1
1
142
1
LYS
conflict
SER
467
1VHI
A
P03211
UNP
467
2
1
ARG
conflict
MET
469
1VHI
A
P03211
UNP
469
4
2
LYS
conflict
SER
467
1VHI
B
P03211
UNP
467
2
2
ARG
conflict
MET
469
1VHI
B
P03211
UNP
469
4
6
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
TYR
561
A
TYR
96
A
LEU
566
A
LEU
101
A
ALA
505
A
ALA
40
A
GLY
511
A
GLY
46
A
ILE
593
A
ILE
128
A
PHE
600
A
PHE
135
B
ARG
594
B
ARG
129
B
PHE
600
B
PHE
135
B
ALA
505
B
ALA
40
B
TYR
510
B
TYR
45
B
TYR
561
B
TYR
96
B
LEU
566
B
LEU
101
19
P 21 21 21