data_1VJ4 # _entry.id 1VJ4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.386 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1VJ4 pdb_00001vj4 10.2210/pdb1vj4/pdb RCSB ADH010 ? ? WWPDB D_1000177054 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1989-01-11 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-04-18 5 'Structure model' 1 4 2024-02-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' diffrn_detector 2 5 'Structure model' chem_comp_atom 3 5 'Structure model' chem_comp_bond 4 5 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_diffrn_detector.detector' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1VJ4 _pdbx_database_status.recvd_initial_deposition_date 1989-01-11 _pdbx_database_status.deposit_site NDB _pdbx_database_status.process_site NDB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Shakked, Z.' 1 'Rabinovich, D.' 2 'Kennard, O.' 3 'Cruse, W.B.' 4 'Salisbury, S.A.' 5 'Viswamitra, M.A.' 6 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Sequence-dependent conformation of an A-DNA double helix: The crystal structure of the octamer d(G-G-T-A-T-A-C-C)' J.Mol.Biol. 166 183 201 1983 JMOBAK UK 0022-2836 0070 ? 6854642 '10.1016/S0022-2836(83)80005-9' 1 'Crystalline A-DNA. The X-Ray Analysis of the Fragment d(G-G-T-A-T-A-C-C)' Proc.R.Soc.London,Ser.B 213 479 487 1981 PRLBA4 UK 0080-4649 0338 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Shakked, Z.' 1 ? primary 'Rabinovich, D.' 2 ? primary 'Kennard, O.' 3 ? primary 'Cruse, W.B.' 4 ? primary 'Salisbury, S.A.' 5 ? primary 'Viswamitra, M.A.' 6 ? 1 'Shakked, Z.' 7 ? 1 'Rabinovich, D.' 8 ? 1 'Cruse, W.B.T.' 9 ? 1 'Egert, E.' 10 ? 1 'Kennard, O.' 11 ? 1 'Sala, G.' 12 ? 1 'Salisbury, S.A.' 13 ? 1 'Viswamitra, M.A.' 14 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description "5'-D(*GP*GP*TP*AP*TP*AP*CP*C)-3'" _entity.formula_weight 2426.617 _entity.pdbx_number_of_molecules 2 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DG)(DG)(DT)(DA)(DT)(DA)(DC)(DC)' _entity_poly.pdbx_seq_one_letter_code_can GGTATACC _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DG n 1 3 DT n 1 4 DA n 1 5 DT n 1 6 DA n 1 7 DC n 1 8 DC n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG G A . n A 1 2 DG 2 2 2 DG G A . n A 1 3 DT 3 3 3 DT T A . n A 1 4 DA 4 4 4 DA A A . n A 1 5 DT 5 5 5 DT T A . n A 1 6 DA 6 6 6 DA A A . n A 1 7 DC 7 7 7 DC C A . n A 1 8 DC 8 8 8 DC C A . n B 1 1 DG 1 9 9 DG G B . n B 1 2 DG 2 10 10 DG G B . n B 1 3 DT 3 11 11 DT T B . n B 1 4 DA 4 12 12 DA A B . n B 1 5 DT 5 13 13 DT T B . n B 1 6 DA 6 14 14 DA A B . n B 1 7 DC 7 15 15 DC C B . n B 1 8 DC 8 16 16 DC C B . n # _software.name CORELS _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 1VJ4 _cell.length_a 44.970 _cell.length_b 44.970 _cell.length_c 41.756 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1VJ4 _symmetry.space_group_name_H-M 'P 61' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 # _exptl.entry_id 1VJ4 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 49.09 _exptl_crystal.density_Matthews 2.42 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.90 _exptl_crystal_grow.pdbx_details 'pH 6.90, VAPOR DIFFUSION' _exptl_crystal_grow.pdbx_pH_range . # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 WATER ? ? ? 1 2 1 MPD ? ? ? 1 3 1 SPERMINE_HCL ? ? ? 1 4 1 BACL2 ? ? ? 1 5 1 'NA CACODYLATE' ? ? ? 1 6 2 WATER ? ? ? 1 7 2 MPD ? ? ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector DIFFRACTOMETER _diffrn_detector.type 'ENRAF-NONIUS CAD4' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source ? _diffrn_source.type ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _refine.entry_id 1VJ4 _refine.ls_number_reflns_obs 3251 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 8.000 _refine.ls_d_res_high 1.800 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.198 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 322 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 322 _refine_hist.d_res_high 1.800 _refine_hist.d_res_low 8.000 # _database_PDB_matrix.entry_id 1VJ4 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1VJ4 _struct.title 'SEQUENCE-DEPENDENT CONFORMATION OF AN A-DNA DOUBLE HELIX: THE CRYSTAL STRUCTURE OF THE OCTAMER D(G-G-T-A-T-A-C-C)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1VJ4 _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'A-DNA, DOUBLE HELIX, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1VJ4 _struct_ref.pdbx_db_accession 1VJ4 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1VJ4 A 1 ? 8 ? 1VJ4 1 ? 8 ? 1 8 2 1 1VJ4 B 1 ? 8 ? 1VJ4 9 ? 16 ? 9 16 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DC 8 N3 ? ? A DG 1 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DC 8 O2 ? ? A DG 1 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DC 8 N4 ? ? A DG 1 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC 7 N3 ? ? A DG 2 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC 7 O2 ? ? A DG 2 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC 7 N4 ? ? A DG 2 B DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B DA 6 N1 ? ? A DT 3 B DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B DA 6 N6 ? ? A DT 3 B DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DA 4 N1 ? ? ? 1_555 B DT 5 N3 ? ? A DA 4 B DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DA 4 N6 ? ? ? 1_555 B DT 5 O4 ? ? A DA 4 B DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DT 5 N3 ? ? ? 1_555 B DA 4 N1 ? ? A DT 5 B DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DT 5 O4 ? ? ? 1_555 B DA 4 N6 ? ? A DT 5 B DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DA 6 N1 ? ? ? 1_555 B DT 3 N3 ? ? A DA 6 B DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DA 6 N6 ? ? ? 1_555 B DT 3 O4 ? ? A DA 6 B DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 7 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 7 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DC 7 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 7 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DC 7 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 7 B DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 8 N3 ? ? ? 1_555 B DG 1 N1 ? ? A DC 8 B DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 8 N4 ? ? ? 1_555 B DG 1 O6 ? ? A DC 8 B DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 8 O2 ? ? ? 1_555 B DG 1 N2 ? ? A DC 8 B DG 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "O5'" A DG 1 ? ? "C5'" A DG 1 ? ? 1.693 1.440 0.253 0.016 N 2 1 "O4'" A DT 5 ? ? "C4'" A DT 5 ? ? 1.511 1.449 0.062 0.009 N 3 1 "O4'" A DA 6 ? ? "C4'" A DA 6 ? ? 1.564 1.449 0.115 0.009 N 4 1 "O4'" A DC 7 ? ? "C4'" A DC 7 ? ? 1.533 1.449 0.084 0.009 N 5 1 "O4'" A DC 8 ? ? "C4'" A DC 8 ? ? 1.536 1.449 0.087 0.009 N 6 1 "O4'" B DG 9 ? ? "C4'" B DG 9 ? ? 1.515 1.449 0.066 0.009 N 7 1 "O4'" B DA 14 ? ? "C4'" B DA 14 ? ? 1.516 1.449 0.067 0.009 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DT 3 ? ? "C4'" A DT 3 ? ? "C3'" A DT 3 ? ? 100.51 104.50 -3.99 0.40 N 2 1 "C3'" A DT 3 ? ? "O3'" A DT 3 ? ? P A DA 4 ? ? 112.40 119.70 -7.30 1.20 Y 3 1 "O4'" A DT 5 ? ? "C4'" A DT 5 ? ? "C3'" A DT 5 ? ? 99.91 104.50 -4.59 0.40 N 4 1 "O5'" A DA 6 ? ? "C5'" A DA 6 ? ? "C4'" A DA 6 ? ? 101.33 109.40 -8.07 0.80 N 5 1 "O4'" A DA 6 ? ? "C4'" A DA 6 ? ? "C3'" A DA 6 ? ? 98.60 104.50 -5.90 0.40 N 6 1 "O4'" A DC 7 ? ? "C4'" A DC 7 ? ? "C3'" A DC 7 ? ? 99.33 104.50 -5.17 0.40 N 7 1 "O4'" A DC 7 ? ? "C1'" A DC 7 ? ? N1 A DC 7 ? ? 110.27 108.30 1.97 0.30 N 8 1 "O4'" A DC 8 ? ? "C4'" A DC 8 ? ? "C3'" A DC 8 ? ? 98.30 104.50 -6.20 0.40 N 9 1 "O4'" B DG 9 ? ? "C4'" B DG 9 ? ? "C3'" B DG 9 ? ? 101.10 104.50 -3.40 0.40 N 10 1 "O4'" B DG 10 ? ? "C1'" B DG 10 ? ? N9 B DG 10 ? ? 103.67 108.00 -4.33 0.70 N 11 1 "O4'" B DT 13 ? ? "C4'" B DT 13 ? ? "C3'" B DT 13 ? ? 101.40 104.50 -3.10 0.40 N 12 1 "O4'" B DA 14 ? ? "C4'" B DA 14 ? ? "C3'" B DA 14 ? ? 98.45 104.50 -6.05 0.40 N 13 1 "C3'" B DC 15 ? ? "O3'" B DC 15 ? ? P B DC 16 ? ? 132.23 119.70 12.53 1.20 Y 14 1 "O5'" B DC 16 ? ? "C5'" B DC 16 ? ? "C4'" B DC 16 ? ? 104.30 109.40 -5.10 0.80 N 15 1 "C1'" B DC 16 ? ? "O4'" B DC 16 ? ? "C4'" B DC 16 ? ? 100.07 110.10 -10.03 1.00 N 16 1 "O4'" B DC 16 ? ? "C1'" B DC 16 ? ? N1 B DC 16 ? ? 99.99 108.00 -8.01 0.70 N # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id DT _pdbx_validate_planes.auth_asym_id B _pdbx_validate_planes.auth_seq_id 11 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.061 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 # _ndb_struct_conf_na.entry_id 1VJ4 _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 B DC 8 1_555 -0.126 -0.234 -0.273 -5.391 -6.430 -4.062 1 A_DG1:DC16_B A 1 ? B 16 ? 19 1 1 A DG 2 1_555 B DC 7 1_555 -0.419 -0.224 -0.152 -9.710 -11.672 2.896 2 A_DG2:DC15_B A 2 ? B 15 ? 19 1 1 A DT 3 1_555 B DA 6 1_555 0.078 -0.164 0.191 -6.785 -8.085 -2.550 3 A_DT3:DA14_B A 3 ? B 14 ? 20 1 1 A DA 4 1_555 B DT 5 1_555 -0.150 -0.203 0.187 -2.648 -10.054 1.247 4 A_DA4:DT13_B A 4 ? B 13 ? 20 1 1 A DT 5 1_555 B DA 4 1_555 -0.065 -0.189 0.069 5.956 -9.705 2.970 5 A_DT5:DA12_B A 5 ? B 12 ? 20 1 1 A DA 6 1_555 B DT 3 1_555 -0.042 -0.138 -0.164 6.583 -16.533 0.307 6 A_DA6:DT11_B A 6 ? B 11 ? 20 1 1 A DC 7 1_555 B DG 2 1_555 0.547 -0.172 -0.234 12.127 -14.071 2.663 7 A_DC7:DG10_B A 7 ? B 10 ? 19 1 1 A DC 8 1_555 B DG 1 1_555 0.750 -0.229 -0.167 10.740 -0.401 -0.355 8 A_DC8:DG9_B A 8 ? B 9 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 B DC 8 1_555 A DG 2 1_555 B DC 7 1_555 0.257 -1.817 3.506 -0.965 7.287 32.161 -4.455 -0.618 3.024 12.944 1.714 32.969 1 AA_DG1DG2:DC15DC16_BB A 1 ? B 16 ? A 2 ? B 15 ? 1 A DG 2 1_555 B DC 7 1_555 A DT 3 1_555 B DA 6 1_555 -0.529 -1.338 3.322 -1.699 0.925 34.623 -2.389 0.623 3.308 1.553 2.853 34.676 2 AA_DG2DT3:DA14DC15_BB A 2 ? B 15 ? A 3 ? B 14 ? 1 A DT 3 1_555 B DA 6 1_555 A DA 4 1_555 B DT 5 1_555 0.253 -1.288 3.132 0.053 9.939 27.598 -4.461 -0.490 2.525 20.030 -0.108 29.300 3 AA_DT3DA4:DT13DA14_BB A 3 ? B 14 ? A 4 ? B 13 ? 1 A DA 4 1_555 B DT 5 1_555 A DT 5 1_555 B DA 4 1_555 0.306 -1.092 3.165 0.929 3.009 32.948 -2.401 -0.388 3.063 5.290 -1.634 33.094 4 AA_DA4DT5:DA12DT13_BB A 4 ? B 13 ? A 5 ? B 12 ? 1 A DT 5 1_555 B DA 4 1_555 A DA 6 1_555 B DT 3 1_555 -0.539 -1.453 3.272 -0.520 14.753 29.087 -4.917 0.879 2.296 27.271 0.962 32.547 5 AA_DT5DA6:DT11DA12_BB A 5 ? B 12 ? A 6 ? B 11 ? 1 A DA 6 1_555 B DT 3 1_555 A DC 7 1_555 B DG 2 1_555 0.511 -1.295 3.165 0.607 3.612 35.064 -2.648 -0.759 3.029 5.974 -1.004 35.249 6 AA_DA6DC7:DG10DT11_BB A 6 ? B 11 ? A 7 ? B 10 ? 1 A DC 7 1_555 B DG 2 1_555 A DC 8 1_555 B DG 1 1_555 -0.524 -1.856 3.463 -1.632 9.680 31.097 -4.964 0.655 2.798 17.517 2.954 32.574 7 AA_DC7DC8:DG9DG10_BB A 7 ? B 10 ? A 8 ? B 9 ? # _atom_sites.entry_id 1VJ4 _atom_sites.fract_transf_matrix[1][1] 0.022237 _atom_sites.fract_transf_matrix[1][2] 0.012839 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.025677 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023949 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DG A 1 1 ? 25.997 20.127 -7.433 1.00 10.00 ? 1 DG A "O5'" 1 ATOM 2 C "C5'" . DG A 1 1 ? 25.329 20.216 -8.986 1.00 10.00 ? 1 DG A "C5'" 1 ATOM 3 C "C4'" . DG A 1 1 ? 26.325 20.150 -10.130 1.00 10.00 ? 1 DG A "C4'" 1 ATOM 4 O "O4'" . DG A 1 1 ? 26.642 21.541 -10.594 1.00 10.00 ? 1 DG A "O4'" 1 ATOM 5 C "C3'" . DG A 1 1 ? 27.661 19.480 -9.817 1.00 10.00 ? 1 DG A "C3'" 1 ATOM 6 O "O3'" . DG A 1 1 ? 27.681 18.113 -10.209 1.00 10.00 ? 1 DG A "O3'" 1 ATOM 7 C "C2'" . DG A 1 1 ? 28.637 20.259 -10.685 1.00 10.00 ? 1 DG A "C2'" 1 ATOM 8 C "C1'" . DG A 1 1 ? 28.048 21.661 -10.648 1.00 10.00 ? 1 DG A "C1'" 1 ATOM 9 N N9 . DG A 1 1 ? 28.504 22.436 -9.441 1.00 10.00 ? 1 DG A N9 1 ATOM 10 C C8 . DG A 1 1 ? 27.742 22.845 -8.364 1.00 10.00 ? 1 DG A C8 1 ATOM 11 N N7 . DG A 1 1 ? 28.412 23.500 -7.445 1.00 10.00 ? 1 DG A N7 1 ATOM 12 C C5 . DG A 1 1 ? 29.712 23.538 -7.946 1.00 10.00 ? 1 DG A C5 1 ATOM 13 C C6 . DG A 1 1 ? 30.876 24.115 -7.395 1.00 10.00 ? 1 DG A C6 1 ATOM 14 O O6 . DG A 1 1 ? 31.018 24.726 -6.334 1.00 10.00 ? 1 DG A O6 1 ATOM 15 N N1 . DG A 1 1 ? 31.989 23.916 -8.238 1.00 10.00 ? 1 DG A N1 1 ATOM 16 C C2 . DG A 1 1 ? 31.962 23.239 -9.445 1.00 10.00 ? 1 DG A C2 1 ATOM 17 N N2 . DG A 1 1 ? 33.125 23.149 -10.101 1.00 10.00 ? 1 DG A N2 1 ATOM 18 N N3 . DG A 1 1 ? 30.865 22.701 -9.967 1.00 10.00 ? 1 DG A N3 1 ATOM 19 C C4 . DG A 1 1 ? 29.777 22.888 -9.170 1.00 10.00 ? 1 DG A C4 1 ATOM 20 P P . DG A 1 2 ? 28.578 17.151 -9.261 1.00 10.00 ? 2 DG A P 1 ATOM 21 O OP1 . DG A 1 2 ? 28.448 15.742 -9.708 1.00 10.00 ? 2 DG A OP1 1 ATOM 22 O OP2 . DG A 1 2 ? 28.183 17.416 -7.850 1.00 10.00 ? 2 DG A OP2 1 ATOM 23 O "O5'" . DG A 1 2 ? 30.069 17.662 -9.495 1.00 10.00 ? 2 DG A "O5'" 1 ATOM 24 C "C5'" . DG A 1 2 ? 30.768 17.151 -10.660 1.00 10.00 ? 2 DG A "C5'" 1 ATOM 25 C "C4'" . DG A 1 2 ? 32.190 17.658 -10.610 1.00 10.00 ? 2 DG A "C4'" 1 ATOM 26 O "O4'" . DG A 1 2 ? 32.194 19.091 -10.355 1.00 10.00 ? 2 DG A "O4'" 1 ATOM 27 C "C3'" . DG A 1 2 ? 33.075 17.089 -9.504 1.00 10.00 ? 2 DG A "C3'" 1 ATOM 28 O "O3'" . DG A 1 2 ? 33.712 15.878 -9.900 1.00 10.00 ? 2 DG A "O3'" 1 ATOM 29 C "C2'" . DG A 1 2 ? 34.125 18.168 -9.320 1.00 10.00 ? 2 DG A "C2'" 1 ATOM 30 C "C1'" . DG A 1 2 ? 33.323 19.434 -9.575 1.00 10.00 ? 2 DG A "C1'" 1 ATOM 31 N N9 . DG A 1 2 ? 32.803 19.967 -8.289 1.00 10.00 ? 2 DG A N9 1 ATOM 32 C C8 . DG A 1 2 ? 31.519 20.010 -7.783 1.00 10.00 ? 2 DG A C8 1 ATOM 33 N N7 . DG A 1 2 ? 31.412 20.657 -6.648 1.00 10.00 ? 2 DG A N7 1 ATOM 34 C C5 . DG A 1 2 ? 32.709 21.081 -6.372 1.00 10.00 ? 2 DG A C5 1 ATOM 35 C C6 . DG A 1 2 ? 33.217 21.829 -5.278 1.00 10.00 ? 2 DG A C6 1 ATOM 36 O O6 . DG A 1 2 ? 32.621 22.284 -4.301 1.00 10.00 ? 2 DG A O6 1 ATOM 37 N N1 . DG A 1 2 ? 34.602 22.031 -5.399 1.00 10.00 ? 2 DG A N1 1 ATOM 38 C C2 . DG A 1 2 ? 35.385 21.564 -6.439 1.00 10.00 ? 2 DG A C2 1 ATOM 39 N N2 . DG A 1 2 ? 36.682 21.856 -6.372 1.00 10.00 ? 2 DG A N2 1 ATOM 40 N N3 . DG A 1 2 ? 34.906 20.867 -7.470 1.00 10.00 ? 2 DG A N3 1 ATOM 41 C C4 . DG A 1 2 ? 33.568 20.660 -7.374 1.00 10.00 ? 2 DG A C4 1 ATOM 42 P P . DT A 1 3 ? 33.919 14.717 -8.886 1.00 10.00 ? 3 DT A P 1 ATOM 43 O OP1 . DT A 1 3 ? 34.188 13.533 -9.742 1.00 10.00 ? 3 DT A OP1 1 ATOM 44 O OP2 . DT A 1 3 ? 32.828 14.558 -7.888 1.00 10.00 ? 3 DT A OP2 1 ATOM 45 O "O5'" . DT A 1 3 ? 35.254 15.161 -8.130 1.00 10.00 ? 3 DT A "O5'" 1 ATOM 46 C "C5'" . DT A 1 3 ? 36.417 15.508 -8.944 1.00 10.00 ? 3 DT A "C5'" 1 ATOM 47 C "C4'" . DT A 1 3 ? 37.514 16.053 -8.059 1.00 10.00 ? 3 DT A "C4'" 1 ATOM 48 O "O4'" . DT A 1 3 ? 37.071 17.420 -7.658 1.00 10.00 ? 3 DT A "O4'" 1 ATOM 49 C "C3'" . DT A 1 3 ? 37.674 15.395 -6.681 1.00 10.00 ? 3 DT A "C3'" 1 ATOM 50 O "O3'" . DT A 1 3 ? 38.553 14.277 -6.727 1.00 10.00 ? 3 DT A "O3'" 1 ATOM 51 C "C2'" . DT A 1 3 ? 38.308 16.493 -5.846 1.00 10.00 ? 3 DT A "C2'" 1 ATOM 52 C "C1'" . DT A 1 3 ? 37.617 17.736 -6.389 1.00 10.00 ? 3 DT A "C1'" 1 ATOM 53 N N1 . DT A 1 3 ? 36.475 18.156 -5.508 1.00 10.00 ? 3 DT A N1 1 ATOM 54 C C2 . DT A 1 3 ? 36.734 18.939 -4.393 1.00 10.00 ? 3 DT A C2 1 ATOM 55 O O2 . DT A 1 3 ? 37.847 19.356 -4.125 1.00 10.00 ? 3 DT A O2 1 ATOM 56 N N3 . DT A 1 3 ? 35.641 19.219 -3.599 1.00 10.00 ? 3 DT A N3 1 ATOM 57 C C4 . DT A 1 3 ? 34.350 18.799 -3.812 1.00 10.00 ? 3 DT A C4 1 ATOM 58 O O4 . DT A 1 3 ? 33.446 19.118 -3.027 1.00 10.00 ? 3 DT A O4 1 ATOM 59 C C5 . DT A 1 3 ? 34.177 17.985 -4.994 1.00 10.00 ? 3 DT A C5 1 ATOM 60 C C7 . DT A 1 3 ? 32.785 17.514 -5.265 1.00 10.00 ? 3 DT A C7 1 ATOM 61 C C6 . DT A 1 3 ? 35.223 17.693 -5.796 1.00 10.00 ? 3 DT A C6 1 ATOM 62 P P . DA A 1 4 ? 38.251 13.210 -5.558 1.00 10.00 ? 4 DA A P 1 ATOM 63 O OP1 . DA A 1 4 ? 39.052 12.011 -5.896 1.00 10.00 ? 4 DA A OP1 1 ATOM 64 O OP2 . DA A 1 4 ? 36.821 12.961 -5.245 1.00 10.00 ? 4 DA A OP2 1 ATOM 65 O "O5'" . DA A 1 4 ? 38.922 14.005 -4.343 1.00 10.00 ? 4 DA A "O5'" 1 ATOM 66 C "C5'" . DA A 1 4 ? 40.343 14.207 -4.322 1.00 10.00 ? 4 DA A "C5'" 1 ATOM 67 C "C4'" . DA A 1 4 ? 40.723 15.045 -3.119 1.00 10.00 ? 4 DA A "C4'" 1 ATOM 68 O "O4'" . DA A 1 4 ? 39.949 16.252 -3.090 1.00 10.00 ? 4 DA A "O4'" 1 ATOM 69 C "C3'" . DA A 1 4 ? 40.468 14.425 -1.741 1.00 10.00 ? 4 DA A "C3'" 1 ATOM 70 O "O3'" . DA A 1 4 ? 41.550 13.604 -1.311 1.00 10.00 ? 4 DA A "O3'" 1 ATOM 71 C "C2'" . DA A 1 4 ? 40.372 15.636 -0.827 1.00 10.00 ? 4 DA A "C2'" 1 ATOM 72 C "C1'" . DA A 1 4 ? 39.747 16.672 -1.750 1.00 10.00 ? 4 DA A "C1'" 1 ATOM 73 N N9 . DA A 1 4 ? 38.265 16.754 -1.591 1.00 10.00 ? 4 DA A N9 1 ATOM 74 C C8 . DA A 1 4 ? 37.273 16.174 -2.334 1.00 10.00 ? 4 DA A C8 1 ATOM 75 N N7 . DA A 1 4 ? 36.077 16.447 -1.904 1.00 10.00 ? 4 DA A N7 1 ATOM 76 C C5 . DA A 1 4 ? 36.300 17.245 -0.793 1.00 10.00 ? 4 DA A C5 1 ATOM 77 C C6 . DA A 1 4 ? 35.425 17.872 0.121 1.00 10.00 ? 4 DA A C6 1 ATOM 78 N N6 . DA A 1 4 ? 34.090 17.763 0.046 1.00 10.00 ? 4 DA A N6 1 ATOM 79 N N1 . DA A 1 4 ? 35.969 18.604 1.111 1.00 10.00 ? 4 DA A N1 1 ATOM 80 C C2 . DA A 1 4 ? 37.294 18.701 1.173 1.00 10.00 ? 4 DA A C2 1 ATOM 81 N N3 . DA A 1 4 ? 38.213 18.176 0.388 1.00 10.00 ? 4 DA A N3 1 ATOM 82 C C4 . DA A 1 4 ? 37.633 17.451 -0.589 1.00 10.00 ? 4 DA A C4 1 ATOM 83 P P . DT A 1 5 ? 41.215 12.314 -0.455 1.00 10.00 ? 5 DT A P 1 ATOM 84 O OP1 . DT A 1 5 ? 42.418 11.454 -0.514 1.00 10.00 ? 5 DT A OP1 1 ATOM 85 O OP2 . DT A 1 5 ? 39.942 11.668 -0.860 1.00 10.00 ? 5 DT A OP2 1 ATOM 86 O "O5'" . DT A 1 5 ? 41.051 12.934 1.019 1.00 10.00 ? 5 DT A "O5'" 1 ATOM 87 C "C5'" . DT A 1 5 ? 42.135 13.658 1.658 1.00 10.00 ? 5 DT A "C5'" 1 ATOM 88 C "C4'" . DT A 1 5 ? 41.633 14.379 2.894 1.00 10.00 ? 5 DT A "C4'" 1 ATOM 89 O "O4'" . DT A 1 5 ? 40.626 15.383 2.384 1.00 10.00 ? 5 DT A "O4'" 1 ATOM 90 C "C3'" . DT A 1 5 ? 40.745 13.572 3.837 1.00 10.00 ? 5 DT A "C3'" 1 ATOM 91 O "O3'" . DT A 1 5 ? 41.496 12.848 4.810 1.00 10.00 ? 5 DT A "O3'" 1 ATOM 92 C "C2'" . DT A 1 5 ? 39.931 14.647 4.543 1.00 10.00 ? 5 DT A "C2'" 1 ATOM 93 C "C1'" . DT A 1 5 ? 39.682 15.640 3.416 1.00 10.00 ? 5 DT A "C1'" 1 ATOM 94 N N1 . DT A 1 5 ? 38.332 15.391 2.814 1.00 10.00 ? 5 DT A N1 1 ATOM 95 C C2 . DT A 1 5 ? 37.251 16.010 3.395 1.00 10.00 ? 5 DT A C2 1 ATOM 96 O O2 . DT A 1 5 ? 37.352 16.770 4.347 1.00 10.00 ? 5 DT A O2 1 ATOM 97 N N3 . DT A 1 5 ? 36.030 15.718 2.823 1.00 10.00 ? 5 DT A N3 1 ATOM 98 C C4 . DT A 1 5 ? 35.801 14.877 1.754 1.00 10.00 ? 5 DT A C4 1 ATOM 99 O O4 . DT A 1 5 ? 34.658 14.690 1.328 1.00 10.00 ? 5 DT A O4 1 ATOM 100 C C5 . DT A 1 5 ? 36.992 14.270 1.211 1.00 10.00 ? 5 DT A C5 1 ATOM 101 C C7 . DT A 1 5 ? 36.794 13.350 0.038 1.00 10.00 ? 5 DT A C7 1 ATOM 102 C C6 . DT A 1 5 ? 38.200 14.538 1.741 1.00 10.00 ? 5 DT A C6 1 ATOM 103 P P . DA A 1 6 ? 40.806 11.613 5.533 1.00 10.00 ? 6 DA A P 1 ATOM 104 O OP1 . DA A 1 6 ? 41.917 10.858 6.155 1.00 10.00 ? 6 DA A OP1 1 ATOM 105 O OP2 . DA A 1 6 ? 39.958 10.846 4.581 1.00 10.00 ? 6 DA A OP2 1 ATOM 106 O "O5'" . DA A 1 6 ? 39.886 12.264 6.668 1.00 10.00 ? 6 DA A "O5'" 1 ATOM 107 C "C5'" . DA A 1 6 ? 40.705 13.051 7.662 1.00 10.00 ? 6 DA A "C5'" 1 ATOM 108 C "C4'" . DA A 1 6 ? 39.632 13.545 8.606 1.00 10.00 ? 6 DA A "C4'" 1 ATOM 109 O "O4'" . DA A 1 6 ? 38.739 14.398 7.646 1.00 10.00 ? 6 DA A "O4'" 1 ATOM 110 C "C3'" . DA A 1 6 ? 38.587 12.521 9.040 1.00 10.00 ? 6 DA A "C3'" 1 ATOM 111 O "O3'" . DA A 1 6 ? 38.951 11.851 10.251 1.00 10.00 ? 6 DA A "O3'" 1 ATOM 112 C "C2'" . DA A 1 6 ? 37.361 13.382 9.299 1.00 10.00 ? 6 DA A "C2'" 1 ATOM 113 C "C1'" . DA A 1 6 ? 37.415 14.363 8.130 1.00 10.00 ? 6 DA A "C1'" 1 ATOM 114 N N9 . DA A 1 6 ? 36.558 13.876 6.994 1.00 10.00 ? 6 DA A N9 1 ATOM 115 C C8 . DA A 1 6 ? 36.911 13.195 5.858 1.00 10.00 ? 6 DA A C8 1 ATOM 116 N N7 . DA A 1 6 ? 35.929 13.019 5.023 1.00 10.00 ? 6 DA A N7 1 ATOM 117 C C5 . DA A 1 6 ? 34.852 13.615 5.658 1.00 10.00 ? 6 DA A C5 1 ATOM 118 C C6 . DA A 1 6 ? 33.507 13.771 5.286 1.00 10.00 ? 6 DA A C6 1 ATOM 119 N N6 . DA A 1 6 ? 33.003 13.296 4.130 1.00 10.00 ? 6 DA A N6 1 ATOM 120 N N1 . DA A 1 6 ? 32.704 14.421 6.146 1.00 10.00 ? 6 DA A N1 1 ATOM 121 C C2 . DA A 1 6 ? 33.213 14.881 7.286 1.00 10.00 ? 6 DA A C2 1 ATOM 122 N N3 . DA A 1 6 ? 34.443 14.807 7.746 1.00 10.00 ? 6 DA A N3 1 ATOM 123 C C4 . DA A 1 6 ? 35.221 14.153 6.861 1.00 10.00 ? 6 DA A C4 1 ATOM 124 P P . DC A 1 7 ? 38.476 10.359 10.652 1.00 10.00 ? 7 DC A P 1 ATOM 125 O OP1 . DC A 1 7 ? 39.232 9.993 11.880 1.00 10.00 ? 7 DC A OP1 1 ATOM 126 O OP2 . DC A 1 7 ? 38.591 9.413 9.512 1.00 10.00 ? 7 DC A OP2 1 ATOM 127 O "O5'" . DC A 1 7 ? 36.932 10.574 11.007 1.00 10.00 ? 7 DC A "O5'" 1 ATOM 128 C "C5'" . DC A 1 7 ? 36.615 11.356 12.189 1.00 10.00 ? 7 DC A "C5'" 1 ATOM 129 C "C4'" . DC A 1 7 ? 35.133 11.625 12.214 1.00 10.00 ? 7 DC A "C4'" 1 ATOM 130 O "O4'" . DC A 1 7 ? 34.856 12.229 10.832 1.00 10.00 ? 7 DC A "O4'" 1 ATOM 131 C "C3'" . DC A 1 7 ? 34.222 10.406 12.138 1.00 10.00 ? 7 DC A "C3'" 1 ATOM 132 O "O3'" . DC A 1 7 ? 33.907 9.892 13.433 1.00 10.00 ? 7 DC A "O3'" 1 ATOM 133 C "C2'" . DC A 1 7 ? 32.959 10.967 11.500 1.00 10.00 ? 7 DC A "C2'" 1 ATOM 134 C "C1'" . DC A 1 7 ? 33.523 11.929 10.460 1.00 10.00 ? 7 DC A "C1'" 1 ATOM 135 N N1 . DC A 1 7 ? 33.487 11.353 9.078 1.00 10.00 ? 7 DC A N1 1 ATOM 136 C C2 . DC A 1 7 ? 32.322 11.516 8.330 1.00 10.00 ? 7 DC A C2 1 ATOM 137 O O2 . DC A 1 7 ? 31.333 12.022 8.873 1.00 10.00 ? 7 DC A O2 1 ATOM 138 N N3 . DC A 1 7 ? 32.311 11.107 7.032 1.00 10.00 ? 7 DC A N3 1 ATOM 139 C C4 . DC A 1 7 ? 33.399 10.562 6.472 1.00 10.00 ? 7 DC A C4 1 ATOM 140 N N4 . DC A 1 7 ? 33.334 10.184 5.199 1.00 10.00 ? 7 DC A N4 1 ATOM 141 C C5 . DC A 1 7 ? 34.602 10.379 7.220 1.00 10.00 ? 7 DC A C5 1 ATOM 142 C C6 . DC A 1 7 ? 34.593 10.799 8.522 1.00 10.00 ? 7 DC A C6 1 ATOM 143 P P . DC A 1 8 ? 33.622 8.299 13.541 1.00 10.00 ? 8 DC A P 1 ATOM 144 O OP1 . DC A 1 8 ? 33.808 7.976 14.986 1.00 10.00 ? 8 DC A OP1 1 ATOM 145 O OP2 . DC A 1 8 ? 34.496 7.555 12.598 1.00 10.00 ? 8 DC A OP2 1 ATOM 146 O "O5'" . DC A 1 8 ? 32.100 8.085 13.120 1.00 10.00 ? 8 DC A "O5'" 1 ATOM 147 C "C5'" . DC A 1 8 ? 31.072 8.798 13.759 1.00 10.00 ? 8 DC A "C5'" 1 ATOM 148 C "C4'" . DC A 1 8 ? 29.775 8.350 13.124 1.00 10.00 ? 8 DC A "C4'" 1 ATOM 149 O "O4'" . DC A 1 8 ? 29.761 9.012 11.738 1.00 10.00 ? 8 DC A "O4'" 1 ATOM 150 C "C3'" . DC A 1 8 ? 29.712 6.893 12.673 1.00 10.00 ? 8 DC A "C3'" 1 ATOM 151 O "O3'" . DC A 1 8 ? 29.289 6.029 13.725 1.00 10.00 ? 8 DC A "O3'" 1 ATOM 152 C "C2'" . DC A 1 8 ? 28.646 6.924 11.579 1.00 10.00 ? 8 DC A "C2'" 1 ATOM 153 C "C1'" . DC A 1 8 ? 28.936 8.245 10.882 1.00 10.00 ? 8 DC A "C1'" 1 ATOM 154 N N1 . DC A 1 8 ? 29.664 8.034 9.591 1.00 10.00 ? 8 DC A N1 1 ATOM 155 C C2 . DC A 1 8 ? 28.949 7.957 8.393 1.00 10.00 ? 8 DC A C2 1 ATOM 156 O O2 . DC A 1 8 ? 27.717 8.019 8.435 1.00 10.00 ? 8 DC A O2 1 ATOM 157 N N3 . DC A 1 8 ? 29.631 7.805 7.224 1.00 10.00 ? 8 DC A N3 1 ATOM 158 C C4 . DC A 1 8 ? 30.966 7.742 7.215 1.00 10.00 ? 8 DC A C4 1 ATOM 159 N N4 . DC A 1 8 ? 31.578 7.602 6.046 1.00 10.00 ? 8 DC A N4 1 ATOM 160 C C5 . DC A 1 8 ? 31.722 7.820 8.431 1.00 10.00 ? 8 DC A C5 1 ATOM 161 C C6 . DC A 1 8 ? 31.018 7.972 9.591 1.00 10.00 ? 8 DC A C6 1 ATOM 162 O "O5'" . DG B 1 1 ? 24.477 8.225 -2.434 1.00 10.00 ? 9 DG B "O5'" 1 ATOM 163 C "C5'" . DG B 1 1 ? 23.861 6.987 -2.034 1.00 10.00 ? 9 DG B "C5'" 1 ATOM 164 C "C4'" . DG B 1 1 ? 23.306 7.123 -0.626 1.00 10.00 ? 9 DG B "C4'" 1 ATOM 165 O "O4'" . DG B 1 1 ? 23.924 6.037 0.230 1.00 10.00 ? 9 DG B "O4'" 1 ATOM 166 C "C3'" . DG B 1 1 ? 23.708 8.373 0.150 1.00 10.00 ? 9 DG B "C3'" 1 ATOM 167 O "O3'" . DG B 1 1 ? 22.834 9.468 -0.109 1.00 10.00 ? 9 DG B "O3'" 1 ATOM 168 C "C2'" . DG B 1 1 ? 23.558 7.941 1.603 1.00 10.00 ? 9 DG B "C2'" 1 ATOM 169 C "C1'" . DG B 1 1 ? 24.066 6.508 1.562 1.00 10.00 ? 9 DG B "C1'" 1 ATOM 170 N N9 . DG B 1 1 ? 25.509 6.477 1.896 1.00 10.00 ? 9 DG B N9 1 ATOM 171 C C8 . DG B 1 1 ? 26.571 6.274 1.031 1.00 10.00 ? 9 DG B C8 1 ATOM 172 N N7 . DG B 1 1 ? 27.738 6.465 1.583 1.00 10.00 ? 9 DG B N7 1 ATOM 173 C C5 . DG B 1 1 ? 27.441 6.815 2.910 1.00 10.00 ? 9 DG B C5 1 ATOM 174 C C6 . DG B 1 1 ? 28.300 7.135 3.988 1.00 10.00 ? 9 DG B C6 1 ATOM 175 O O6 . DG B 1 1 ? 29.527 7.181 4.013 1.00 10.00 ? 9 DG B O6 1 ATOM 176 N N1 . DG B 1 1 ? 27.573 7.435 5.161 1.00 10.00 ? 9 DG B N1 1 ATOM 177 C C2 . DG B 1 1 ? 26.202 7.427 5.261 1.00 10.00 ? 9 DG B C2 1 ATOM 178 N N2 . DG B 1 1 ? 25.696 7.742 6.464 1.00 10.00 ? 9 DG B N2 1 ATOM 179 N N3 . DG B 1 1 ? 25.392 7.115 4.251 1.00 10.00 ? 9 DG B N3 1 ATOM 180 C C4 . DG B 1 1 ? 26.074 6.823 3.107 1.00 10.00 ? 9 DG B C4 1 ATOM 181 P P . DG B 1 2 ? 23.438 10.951 -0.205 1.00 10.00 ? 10 DG B P 1 ATOM 182 O OP1 . DG B 1 2 ? 22.377 11.808 -0.777 1.00 10.00 ? 10 DG B OP1 1 ATOM 183 O OP2 . DG B 1 2 ? 24.727 10.963 -0.940 1.00 10.00 ? 10 DG B OP2 1 ATOM 184 O "O5'" . DG B 1 2 ? 23.699 11.333 1.332 1.00 10.00 ? 10 DG B "O5'" 1 ATOM 185 C "C5'" . DG B 1 2 ? 22.557 11.590 2.104 1.00 10.00 ? 10 DG B "C5'" 1 ATOM 186 C "C4'" . DG B 1 2 ? 22.914 11.641 3.578 1.00 10.00 ? 10 DG B "C4'" 1 ATOM 187 O "O4'" . DG B 1 2 ? 23.789 10.523 3.879 1.00 10.00 ? 10 DG B "O4'" 1 ATOM 188 C "C3'" . DG B 1 2 ? 23.737 12.840 4.038 1.00 10.00 ? 10 DG B "C3'" 1 ATOM 189 O "O3'" . DG B 1 2 ? 22.921 13.958 4.380 1.00 10.00 ? 10 DG B "O3'" 1 ATOM 190 C "C2'" . DG B 1 2 ? 24.421 12.326 5.295 1.00 10.00 ? 10 DG B "C2'" 1 ATOM 191 C "C1'" . DG B 1 2 ? 24.655 10.862 4.952 1.00 10.00 ? 10 DG B "C1'" 1 ATOM 192 N N9 . DG B 1 2 ? 26.020 10.702 4.368 1.00 10.00 ? 10 DG B N9 1 ATOM 193 C C8 . DG B 1 2 ? 26.436 10.402 3.082 1.00 10.00 ? 10 DG B C8 1 ATOM 194 N N7 . DG B 1 2 ? 27.731 10.371 2.931 1.00 10.00 ? 10 DG B N7 1 ATOM 195 C C5 . DG B 1 2 ? 28.223 10.663 4.209 1.00 10.00 ? 10 DG B C5 1 ATOM 196 C C6 . DG B 1 2 ? 29.552 10.768 4.677 1.00 10.00 ? 10 DG B C6 1 ATOM 197 O O6 . DG B 1 2 ? 30.600 10.620 4.050 1.00 10.00 ? 10 DG B O6 1 ATOM 198 N N1 . DG B 1 2 ? 29.599 11.084 6.050 1.00 10.00 ? 10 DG B N1 1 ATOM 199 C C2 . DG B 1 2 ? 28.495 11.282 6.861 1.00 10.00 ? 10 DG B C2 1 ATOM 200 N N2 . DG B 1 2 ? 28.745 11.582 8.142 1.00 10.00 ? 10 DG B N2 1 ATOM 201 N N3 . DG B 1 2 ? 27.243 11.177 6.426 1.00 10.00 ? 10 DG B N3 1 ATOM 202 C C4 . DG B 1 2 ? 27.178 10.870 5.098 1.00 10.00 ? 10 DG B C4 1 ATOM 203 P P . DT B 1 3 ? 23.380 15.415 3.950 1.00 10.00 ? 11 DT B P 1 ATOM 204 O OP1 . DT B 1 3 ? 22.199 16.306 3.996 1.00 10.00 ? 11 DT B OP1 1 ATOM 205 O OP2 . DT B 1 3 ? 24.131 15.415 2.664 1.00 10.00 ? 11 DT B OP2 1 ATOM 206 O "O5'" . DT B 1 3 ? 24.371 15.753 5.157 1.00 10.00 ? 11 DT B "O5'" 1 ATOM 207 C "C5'" . DT B 1 3 ? 23.728 15.566 6.493 1.00 10.00 ? 11 DT B "C5'" 1 ATOM 208 C "C4'" . DT B 1 3 ? 24.749 16.018 7.512 1.00 10.00 ? 11 DT B "C4'" 1 ATOM 209 O "O4'" . DT B 1 3 ? 25.660 14.854 7.641 1.00 10.00 ? 11 DT B "O4'" 1 ATOM 210 C "C3'" . DT B 1 3 ? 25.682 17.144 7.073 1.00 10.00 ? 11 DT B "C3'" 1 ATOM 211 O "O3'" . DT B 1 3 ? 25.206 18.421 7.491 1.00 10.00 ? 11 DT B "O3'" 1 ATOM 212 C "C2'" . DT B 1 3 ? 26.964 16.824 7.817 1.00 10.00 ? 11 DT B "C2'" 1 ATOM 213 C "C1'" . DT B 1 3 ? 26.991 15.305 7.767 1.00 10.00 ? 11 DT B "C1'" 1 ATOM 214 N N1 . DT B 1 3 ? 27.760 14.752 6.631 1.00 10.00 ? 11 DT B N1 1 ATOM 215 C C2 . DT B 1 3 ? 29.118 14.643 6.852 1.00 10.00 ? 11 DT B C2 1 ATOM 216 O O2 . DT B 1 3 ? 29.624 14.795 7.955 1.00 10.00 ? 11 DT B O2 1 ATOM 217 N N3 . DT B 1 3 ? 29.869 14.347 5.729 1.00 10.00 ? 11 DT B N3 1 ATOM 218 C C4 . DT B 1 3 ? 29.404 14.157 4.443 1.00 10.00 ? 11 DT B C4 1 ATOM 219 O O4 . DT B 1 3 ? 30.179 13.896 3.512 1.00 10.00 ? 11 DT B O4 1 ATOM 220 C C5 . DT B 1 3 ? 27.974 14.297 4.309 1.00 10.00 ? 11 DT B C5 1 ATOM 221 C C7 . DT B 1 3 ? 27.418 14.090 2.923 1.00 10.00 ? 11 DT B C7 1 ATOM 222 C C6 . DT B 1 3 ? 27.209 14.577 5.382 1.00 10.00 ? 11 DT B C6 1 ATOM 223 P P . DA B 1 4 ? 25.631 19.648 6.572 1.00 10.00 ? 12 DA B P 1 ATOM 224 O OP1 . DA B 1 4 ? 24.749 20.754 7.019 1.00 10.00 ? 12 DA B OP1 1 ATOM 225 O OP2 . DA B 1 4 ? 25.545 19.297 5.123 1.00 10.00 ? 12 DA B OP2 1 ATOM 226 O "O5'" . DA B 1 4 ? 27.148 19.971 6.948 1.00 10.00 ? 12 DA B "O5'" 1 ATOM 227 C "C5'" . DA B 1 4 ? 27.569 20.240 8.297 1.00 10.00 ? 12 DA B "C5'" 1 ATOM 228 C "C4'" . DA B 1 4 ? 29.069 20.205 8.439 1.00 10.00 ? 12 DA B "C4'" 1 ATOM 229 O "O4'" . DA B 1 4 ? 29.563 18.912 8.017 1.00 10.00 ? 12 DA B "O4'" 1 ATOM 230 C "C3'" . DA B 1 4 ? 29.856 21.163 7.545 1.00 10.00 ? 12 DA B "C3'" 1 ATOM 231 O "O3'" . DA B 1 4 ? 29.977 22.456 8.130 1.00 10.00 ? 12 DA B "O3'" 1 ATOM 232 C "C2'" . DA B 1 4 ? 31.227 20.516 7.479 1.00 10.00 ? 12 DA B "C2'" 1 ATOM 233 C "C1'" . DA B 1 4 ? 30.881 19.036 7.529 1.00 10.00 ? 12 DA B "C1'" 1 ATOM 234 N N9 . DA B 1 4 ? 30.863 18.374 6.192 1.00 10.00 ? 12 DA B N9 1 ATOM 235 C C8 . DA B 1 4 ? 29.833 18.055 5.345 1.00 10.00 ? 12 DA B C8 1 ATOM 236 N N7 . DA B 1 4 ? 30.218 17.436 4.263 1.00 10.00 ? 12 DA B N7 1 ATOM 237 C C5 . DA B 1 4 ? 31.589 17.350 4.401 1.00 10.00 ? 12 DA B C5 1 ATOM 238 C C6 . DA B 1 4 ? 32.592 16.797 3.578 1.00 10.00 ? 12 DA B C6 1 ATOM 239 N N6 . DA B 1 4 ? 32.336 16.205 2.393 1.00 10.00 ? 12 DA B N6 1 ATOM 240 N N1 . DA B 1 4 ? 33.856 16.875 4.017 1.00 10.00 ? 12 DA B N1 1 ATOM 241 C C2 . DA B 1 4 ? 34.099 17.459 5.186 1.00 10.00 ? 12 DA B C2 1 ATOM 242 N N3 . DA B 1 4 ? 33.260 18.008 6.042 1.00 10.00 ? 12 DA B N3 1 ATOM 243 C C4 . DA B 1 4 ? 32.001 17.915 5.579 1.00 10.00 ? 12 DA B C4 1 ATOM 244 P P . DT B 1 5 ? 30.242 23.694 7.190 1.00 10.00 ? 13 DT B P 1 ATOM 245 O OP1 . DT B 1 5 ? 29.835 24.898 7.959 1.00 10.00 ? 13 DT B OP1 1 ATOM 246 O OP2 . DT B 1 5 ? 29.593 23.527 5.858 1.00 10.00 ? 13 DT B OP2 1 ATOM 247 O "O5'" . DT B 1 5 ? 31.828 23.675 7.002 1.00 10.00 ? 13 DT B "O5'" 1 ATOM 248 C "C5'" . DT B 1 5 ? 32.819 24.014 7.984 1.00 10.00 ? 13 DT B "C5'" 1 ATOM 249 C "C4'" . DT B 1 5 ? 34.146 23.632 7.370 1.00 10.00 ? 13 DT B "C4'" 1 ATOM 250 O "O4'" . DT B 1 5 ? 34.152 22.226 6.944 1.00 10.00 ? 13 DT B "O4'" 1 ATOM 251 C "C3'" . DT B 1 5 ? 34.526 24.345 6.067 1.00 10.00 ? 13 DT B "C3'" 1 ATOM 252 O "O3'" . DT B 1 5 ? 35.106 25.622 6.314 1.00 10.00 ? 13 DT B "O3'" 1 ATOM 253 C "C2'" . DT B 1 5 ? 35.578 23.426 5.466 1.00 10.00 ? 13 DT B "C2'" 1 ATOM 254 C "C1'" . DT B 1 5 ? 35.061 22.055 5.871 1.00 10.00 ? 13 DT B "C1'" 1 ATOM 255 N N1 . DT B 1 5 ? 34.339 21.365 4.748 1.00 10.00 ? 13 DT B N1 1 ATOM 256 C C2 . DT B 1 5 ? 35.070 20.629 3.837 1.00 10.00 ? 13 DT B C2 1 ATOM 257 O O2 . DT B 1 5 ? 36.271 20.481 3.929 1.00 10.00 ? 13 DT B O2 1 ATOM 258 N N3 . DT B 1 5 ? 34.339 20.065 2.806 1.00 10.00 ? 13 DT B N3 1 ATOM 259 C C4 . DT B 1 5 ? 32.986 20.174 2.606 1.00 10.00 ? 13 DT B C4 1 ATOM 260 O O4 . DT B 1 5 ? 32.441 19.621 1.641 1.00 10.00 ? 13 DT B O4 1 ATOM 261 C C5 . DT B 1 5 ? 32.304 20.964 3.608 1.00 10.00 ? 13 DT B C5 1 ATOM 262 C C7 . DT B 1 5 ? 30.827 21.100 3.437 1.00 10.00 ? 13 DT B C7 1 ATOM 263 C C6 . DT B 1 5 ? 32.979 21.525 4.631 1.00 10.00 ? 13 DT B C6 1 ATOM 264 P P . DA B 1 6 ? 34.953 26.775 5.270 1.00 10.00 ? 14 DA B P 1 ATOM 265 O OP1 . DA B 1 6 ? 35.128 28.037 6.030 1.00 10.00 ? 14 DA B OP1 1 ATOM 266 O OP2 . DA B 1 6 ? 33.685 26.658 4.505 1.00 10.00 ? 14 DA B OP2 1 ATOM 267 O "O5'" . DA B 1 6 ? 36.181 26.549 4.276 1.00 10.00 ? 14 DA B "O5'" 1 ATOM 268 C "C5'" . DA B 1 6 ? 37.595 26.545 4.752 1.00 10.00 ? 14 DA B "C5'" 1 ATOM 269 C "C4'" . DA B 1 6 ? 38.436 25.852 3.700 1.00 10.00 ? 14 DA B "C4'" 1 ATOM 270 O "O4'" . DA B 1 6 ? 37.759 24.508 3.516 1.00 10.00 ? 14 DA B "O4'" 1 ATOM 271 C "C3'" . DA B 1 6 ? 38.303 26.370 2.263 1.00 10.00 ? 14 DA B "C3'" 1 ATOM 272 O "O3'" . DA B 1 6 ? 39.200 27.441 1.992 1.00 10.00 ? 14 DA B "O3'" 1 ATOM 273 C "C2'" . DA B 1 6 ? 38.703 25.162 1.424 1.00 10.00 ? 14 DA B "C2'" 1 ATOM 274 C "C1'" . DA B 1 6 ? 38.105 24.017 2.226 1.00 10.00 ? 14 DA B "C1'" 1 ATOM 275 N N9 . DA B 1 6 ? 36.866 23.515 1.562 1.00 10.00 ? 14 DA B N9 1 ATOM 276 C C8 . DA B 1 6 ? 35.560 23.737 1.908 1.00 10.00 ? 14 DA B C8 1 ATOM 277 N N7 . DA B 1 6 ? 34.712 23.071 1.186 1.00 10.00 ? 14 DA B N7 1 ATOM 278 C C5 . DA B 1 6 ? 35.508 22.370 0.296 1.00 10.00 ? 14 DA B C5 1 ATOM 279 C C6 . DA B 1 6 ? 35.207 21.467 -0.747 1.00 10.00 ? 14 DA B C6 1 ATOM 280 N N6 . DA B 1 6 ? 33.955 21.112 -1.073 1.00 10.00 ? 14 DA B N6 1 ATOM 281 N N1 . DA B 1 6 ? 36.235 20.941 -1.432 1.00 10.00 ? 14 DA B N1 1 ATOM 282 C C2 . DA B 1 6 ? 37.471 21.299 -1.102 1.00 10.00 ? 14 DA B C2 1 ATOM 283 N N3 . DA B 1 6 ? 37.878 22.121 -0.159 1.00 10.00 ? 14 DA B N3 1 ATOM 284 C C4 . DA B 1 6 ? 36.828 22.623 0.514 1.00 10.00 ? 14 DA B C4 1 ATOM 285 P P . DC B 1 7 ? 38.861 28.629 0.960 1.00 10.00 ? 15 DC B P 1 ATOM 286 O OP1 . DC B 1 7 ? 39.657 29.789 1.432 1.00 10.00 ? 15 DC B OP1 1 ATOM 287 O OP2 . DC B 1 7 ? 37.395 28.847 0.889 1.00 10.00 ? 15 DC B OP2 1 ATOM 288 O "O5'" . DC B 1 7 ? 39.389 28.142 -0.472 1.00 10.00 ? 15 DC B "O5'" 1 ATOM 289 C "C5'" . DC B 1 7 ? 40.415 27.285 -0.601 1.00 10.00 ? 15 DC B "C5'" 1 ATOM 290 C "C4'" . DC B 1 7 ? 40.486 26.467 -1.875 1.00 10.00 ? 15 DC B "C4'" 1 ATOM 291 O "O4'" . DC B 1 7 ? 39.749 25.260 -1.637 1.00 10.00 ? 15 DC B "O4'" 1 ATOM 292 C "C3'" . DC B 1 7 ? 39.803 27.059 -3.111 1.00 10.00 ? 15 DC B "C3'" 1 ATOM 293 O "O3'" . DC B 1 7 ? 40.680 27.893 -3.871 1.00 10.00 ? 15 DC B "O3'" 1 ATOM 294 C "C2'" . DC B 1 7 ? 39.461 25.828 -3.938 1.00 10.00 ? 15 DC B "C2'" 1 ATOM 295 C "C1'" . DC B 1 7 ? 39.169 24.800 -2.852 1.00 10.00 ? 15 DC B "C1'" 1 ATOM 296 N N1 . DC B 1 7 ? 37.694 24.660 -2.677 1.00 10.00 ? 15 DC B N1 1 ATOM 297 C C2 . DC B 1 7 ? 37.026 23.737 -3.482 1.00 10.00 ? 15 DC B C2 1 ATOM 298 O O2 . DC B 1 7 ? 37.678 23.044 -4.267 1.00 10.00 ? 15 DC B O2 1 ATOM 299 N N3 . DC B 1 7 ? 35.681 23.644 -3.378 1.00 10.00 ? 15 DC B N3 1 ATOM 300 C C4 . DC B 1 7 ? 35.000 24.411 -2.518 1.00 10.00 ? 15 DC B C4 1 ATOM 301 N N4 . DC B 1 7 ? 33.689 24.275 -2.455 1.00 10.00 ? 15 DC B N4 1 ATOM 302 C C5 . DC B 1 7 ? 35.663 25.365 -1.683 1.00 10.00 ? 15 DC B C5 1 ATOM 303 C C6 . DC B 1 7 ? 37.017 25.443 -1.800 1.00 10.00 ? 15 DC B C6 1 ATOM 304 P P . DC B 1 8 ? 40.498 28.644 -5.203 1.00 10.00 ? 16 DC B P 1 ATOM 305 O OP1 . DC B 1 8 ? 41.815 29.275 -5.458 1.00 10.00 ? 16 DC B OP1 1 ATOM 306 O OP2 . DC B 1 8 ? 39.364 29.587 -5.019 1.00 10.00 ? 16 DC B OP2 1 ATOM 307 O "O5'" . DC B 1 8 ? 40.142 27.624 -6.380 1.00 10.00 ? 16 DC B "O5'" 1 ATOM 308 C "C5'" . DC B 1 8 ? 41.004 26.654 -7.090 1.00 10.00 ? 16 DC B "C5'" 1 ATOM 309 C "C4'" . DC B 1 8 ? 40.068 25.961 -8.059 1.00 10.00 ? 16 DC B "C4'" 1 ATOM 310 O "O4'" . DC B 1 8 ? 38.958 25.587 -7.257 1.00 10.00 ? 16 DC B "O4'" 1 ATOM 311 C "C3'" . DC B 1 8 ? 39.515 26.810 -9.207 1.00 10.00 ? 16 DC B "C3'" 1 ATOM 312 O "O3'" . DC B 1 8 ? 40.241 26.619 -10.422 1.00 10.00 ? 16 DC B "O3'" 1 ATOM 313 C "C2'" . DC B 1 8 ? 38.108 26.272 -9.378 1.00 10.00 ? 16 DC B "C2'" 1 ATOM 314 C "C1'" . DC B 1 8 ? 38.031 25.229 -8.268 1.00 10.00 ? 16 DC B "C1'" 1 ATOM 315 N N1 . DC B 1 8 ? 36.705 25.455 -7.508 1.00 10.00 ? 16 DC B N1 1 ATOM 316 C C2 . DC B 1 8 ? 35.560 24.781 -7.913 1.00 10.00 ? 16 DC B C2 1 ATOM 317 O O2 . DC B 1 8 ? 35.612 24.053 -8.915 1.00 10.00 ? 16 DC B O2 1 ATOM 318 N N3 . DC B 1 8 ? 34.418 24.952 -7.199 1.00 10.00 ? 16 DC B N3 1 ATOM 319 C C4 . DC B 1 8 ? 34.395 25.747 -6.117 1.00 10.00 ? 16 DC B C4 1 ATOM 320 N N4 . DC B 1 8 ? 33.260 25.875 -5.453 1.00 10.00 ? 16 DC B N4 1 ATOM 321 C C5 . DC B 1 8 ? 35.556 26.455 -5.683 1.00 10.00 ? 16 DC B C5 1 ATOM 322 C C6 . DC B 1 8 ? 36.691 26.265 -6.414 1.00 10.00 ? 16 DC B C6 1 #