0.018786 0.000000 0.000000 0.000000 0.018215 0.000000 0.000000 0.000000 0.012154 0.00000 0.00000 0.00000 Schweinitz, A. Steinmetzer, T. Banke, I.J. Arlt, M.J.E. Stuerzebecher, A. Schuster, O. Geissler, A. Giersiefen, H. Zeslawska, E. Jacob, U. Kruger, A. Stuerzebecher, J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 53.230 54.900 82.280 C28 H33 N5 O6 S 567.657 N-(BENZYLSULFONYL)-L-SERYL-N~1~-{4-[AMINO(IMINO)METHYL]BENZYL}-O-BENZYL-L-SERINAMIDE non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N C N 2 N O N 3 N C N 4 S C N 5 N N N 6 N C N 7 R C N 8 N N N 9 N S N 10 N C Y 11 N C Y 12 N C Y 13 N C Y 14 N C Y 15 N C Y 16 N C N 17 N O N 18 N O N 19 N C N 20 N O N 21 N O N 22 N C N 23 N O N 24 N N N 25 N C Y 26 N C Y 27 N C Y 28 N C Y 29 N C Y 30 N C Y 31 N C N 32 N C N 33 N N N 34 N N Y 35 N C Y 36 N C Y 37 N C Y 38 N C Y 39 N C Y 40 N C N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N O N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N N N 88 S C N 89 N C N 90 N O N 91 N C N 92 N C N 93 N C N 94 N N N 95 N C N 96 N N N 97 N N N 98 N O N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N N N 115 S C N 116 N C N 117 N O N 118 N C N 119 N C N 120 N O N 121 N N N 122 N O N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N N N 132 S C N 133 N C N 134 N O N 135 N C N 136 N C N 137 N O N 138 N O N 139 N O N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N H N 147 N N N 148 R C N 149 N C N 150 N O N 151 N C N 152 N S N 153 N O N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 N C N 166 N C N 167 N C N 168 N O N 169 N N N 170 N O N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N N N 182 S C N 183 N C N 184 N O N 185 N C N 186 N C N 187 N C N 188 N O N 189 N O N 190 N O N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N N N 201 N C N 202 N C N 203 N O N 204 N O N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N N N 211 S C N 212 N C N 213 N O N 214 N C Y 215 N C Y 216 N N Y 217 N C Y 218 N C Y 219 N N N 220 N O N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N O N 232 N H N 233 N H N 234 N N N 235 S C N 236 N C N 237 N O N 238 S C N 239 N C N 240 N C N 241 N C N 242 N O N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N N N 257 S C N 258 N C N 259 N O N 260 N C N 261 N C N 262 N C N 263 N C N 264 N O N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N N N 279 S C N 280 N C N 281 N O N 282 N C N 283 N C N 284 N C N 285 N C N 286 N N N 287 N O N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N N N 304 S C N 305 N C N 306 N O N 307 N C N 308 N C N 309 N S N 310 N C N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N N N 324 S C N 325 N C N 326 N O N 327 N C Y 328 N C Y 329 N C Y 330 N C Y 331 N C Y 332 N C Y 333 N C N 334 N O N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N N N 347 S C N 348 N C N 349 N O N 350 N C N 351 N C N 352 N C N 353 N O N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N N N 364 S C N 365 N C N 366 N O N 367 N C N 368 N O N 369 N O N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N S N 378 N O N 379 N O N 380 N O N 381 N O N 382 N N N 383 S C N 384 N C N 385 N O N 386 R C N 387 N O N 388 N C N 389 N O N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N N N 400 S C N 401 N C N 402 N O N 403 N C Y 404 N C Y 405 N C Y 406 N C Y 407 N N Y 408 N C Y 409 N C Y 410 N C Y 411 N C Y 412 N C N 413 N O N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N N N 427 S C N 428 N C N 429 N O N 430 N C Y 431 N C Y 432 N C Y 433 N C Y 434 N C Y 435 N C Y 436 N C N 437 N O N 438 N O N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N N N 451 S C N 452 N C N 453 N O N 454 N C N 455 N C N 456 N C N 457 N O N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N H N 465 N H N 466 N H N 467 N H N 468 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N doub N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N doub N 23 N doub N 24 N sing N 25 N sing N 26 N sing Y 27 N doub Y 28 N sing Y 29 N sing N 30 N sing Y 31 N doub N 32 N sing Y 33 N sing N 34 N sing Y 35 N doub N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N doub N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing Y 49 N doub Y 50 N sing Y 51 N sing N 52 N sing Y 53 N doub N 54 N sing Y 55 N sing N 56 N sing Y 57 N doub N 58 N sing N 59 N sing N 60 N doub N 61 N sing N 62 N sing N 63 N sing N 64 N sing Y 65 N doub Y 66 N sing Y 67 N sing N 68 N sing Y 69 N doub N 70 N sing Y 71 N sing N 72 N sing Y 73 N doub N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N doub N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N doub N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N doub N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N doub N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N doub N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N doub N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N doub N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N doub N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N doub N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N doub N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N doub N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N doub N 211 N sing N 212 N sing N 213 N sing N 214 N sing Y 215 N sing Y 216 N doub Y 217 N doub N 218 N sing Y 219 N sing N 220 N sing Y 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N doub N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N doub N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N doub N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N doub N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N doub N 319 N sing N 320 N sing N 321 N sing N 322 N sing Y 323 N doub Y 324 N sing Y 325 N sing N 326 N sing Y 327 N doub N 328 N sing Y 329 N doub N 330 N sing Y 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N doub N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N doub N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N doub N 366 N doub N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N doub N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N doub N 392 N sing N 393 N sing N 394 N sing N 395 N sing Y 396 N doub Y 397 N sing Y 398 N sing N 399 N sing Y 400 N doub Y 401 N sing Y 402 N sing N 403 N sing Y 404 N sing Y 405 N doub N 406 N sing Y 407 N doub N 408 N sing Y 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N doub N 420 N sing N 421 N sing N 422 N sing N 423 N sing Y 424 N doub Y 425 N sing Y 426 N sing N 427 N sing Y 428 N doub N 429 N sing Y 430 N doub N 431 N sing Y 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N doub N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing US J.Biol.Chem. JBCHA3 0071 0021-9258 279 33613 33622 10.1074/jbc.M314151200 15150279 Design of novel and selective inhibitors of urokinase-type plasminogen activator with improved pharmacokinetic properties for use as antimetastatic agents 2004 10.2210/pdb1vj9/pdb pdb_00001vj9 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 293 1 IMAGE PLATE 2002-04-25 MARRESEARCH GRAPHITE SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU 29683.951 plasminogen activator, urokinase 3.4.21.73 B Chain C122S 1 man polymer 96.063 SULFATE ION 2 syn non-polymer 567.657 N-(BENZYLSULFONYL)-L-SERYL-N~1~-{4-[AMINO(IMINO)METHYL]BENZYL}-O-BENZYL-L-SERINAMIDE 1 syn non-polymer 18.015 water 92 nat water no no LKFQCGQKTLRPRFKIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVYLGRSR LNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTISLPSMYNDPQFGTSCEITGFGKENS TDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALK DKPGVYTRVSHFLPWIRSHTKE LKFQCGQKTLRPRFKIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVYLGRSR LNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTISLPSMYNDPQFGTSCEITGFGKENS TDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALK DKPGVYTRVSHFLPWIRSHTKE U polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia sample 9606 Homo sapiens 562 Escherichia coli Plasmid PET21D 1 2.03 39.26 VAPOR DIFFUSION, HANGING DROP 5.2 sodium citrate, ammonium sulfate, lithium sulfate, pH 5.2, VAPOR DIFFUSION, HANGING DROP, temperature 277K 277 database_2 struct_ref_seq_dif struct_site chem_comp_atom chem_comp_bond pdbx_initial_refinement_model repository Initial release Version format compliance Version format compliance Database references Derived calculations Data collection Refinement description 1 0 2004-06-22 1 1 2008-04-29 1 2 2011-07-13 1 3 2021-10-27 1 4 2023-08-23 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Urokinase Plasminogen Activator B-Chain-Benzamidine Complex:The same protein complexed with Benzamidine Urokinase Plasminogen Activator B-Chain-Amiloride Complex: The same protein complexed with Amiloride Urokinase Plasminogen Activator B Chain-Uki-1D Complex: The same protein complexed with UKI-1D Urokinase Plasminogen Activator B-Chain-JT464 Complex: The same protein complexed with JT464 Urokinase Plasminogen Activator B-Chain-J435 Complex: The same protein complexed with J435 RCSB Y RCSB 2004-02-03 REL SO4 SULFATE ION 5IN N-(BENZYLSULFONYL)-L-SERYL-N~1~-{4-[AMINO(IMINO)METHYL]BENZYL}-O-BENZYL-L-SERINAMIDE HOH water 1F5K PDB Entry 1F5K PDB experimental model SO4 401 2 SO4 SO4 401 U SO4 403 2 SO4 SO4 403 U 5IN 300 3 5IN 5IN 300 U WAT 1 4 HOH HOH 404 U WAT 2 4 HOH HOH 405 U WAT 3 4 HOH HOH 406 U WAT 4 4 HOH HOH 407 U WAT 5 4 HOH HOH 408 U WAT 6 4 HOH HOH 409 U WAT 7 4 HOH HOH 410 U WAT 8 4 HOH HOH 411 U WAT 9 4 HOH HOH 412 U WAT 10 4 HOH HOH 413 U WAT 11 4 HOH HOH 414 U WAT 12 4 HOH HOH 415 U WAT 13 4 HOH HOH 416 U WAT 14 4 HOH HOH 417 U WAT 15 4 HOH HOH 418 U WAT 16 4 HOH HOH 419 U WAT 17 4 HOH HOH 420 U WAT 18 4 HOH HOH 421 U WAT 19 4 HOH HOH 422 U WAT 20 4 HOH HOH 423 U WAT 21 4 HOH HOH 424 U WAT 22 4 HOH HOH 425 U WAT 23 4 HOH HOH 426 U WAT 24 4 HOH HOH 427 U WAT 25 4 HOH HOH 428 U WAT 26 4 HOH HOH 429 U WAT 27 4 HOH HOH 430 U WAT 28 4 HOH HOH 431 U WAT 29 4 HOH HOH 432 U WAT 30 4 HOH HOH 433 U WAT 31 4 HOH HOH 434 U WAT 32 4 HOH HOH 435 U WAT 33 4 HOH HOH 436 U WAT 34 4 HOH HOH 437 U WAT 35 4 HOH HOH 438 U WAT 36 4 HOH HOH 439 U WAT 37 4 HOH HOH 440 U WAT 38 4 HOH HOH 441 U WAT 39 4 HOH HOH 442 U WAT 40 4 HOH HOH 443 U WAT 45 4 HOH HOH 444 U WAT 46 4 HOH HOH 445 U WAT 47 4 HOH HOH 446 U WAT 48 4 HOH HOH 447 U WAT 50 4 HOH HOH 448 U WAT 52 4 HOH HOH 449 U WAT 53 4 HOH HOH 450 U WAT 54 4 HOH HOH 451 U WAT 55 4 HOH HOH 452 U WAT 57 4 HOH HOH 453 U WAT 62 4 HOH HOH 454 U WAT 63 4 HOH HOH 455 U WAT 65 4 HOH HOH 456 U WAT 66 4 HOH HOH 457 U WAT 67 4 HOH HOH 458 U WAT 70 4 HOH HOH 459 U WAT 72 4 HOH HOH 460 U WAT 73 4 HOH HOH 461 U WAT 75 4 HOH HOH 462 U WAT 76 4 HOH HOH 463 U WAT 78 4 HOH HOH 464 U WAT 79 4 HOH HOH 465 U WAT 80 4 HOH HOH 466 U WAT 81 4 HOH HOH 467 U WAT 87 4 HOH HOH 468 U WAT 89 4 HOH HOH 469 U WAT 90 4 HOH HOH 470 U WAT 93 4 HOH HOH 471 U WAT 94 4 HOH HOH 472 U WAT 97 4 HOH HOH 473 U WAT 101 4 HOH HOH 474 U WAT 102 4 HOH HOH 475 U WAT 103 4 HOH HOH 476 U WAT 104 4 HOH HOH 477 U WAT 105 4 HOH HOH 478 U WAT 108 4 HOH HOH 479 U WAT 109 4 HOH HOH 480 U WAT 110 4 HOH HOH 481 U WAT 115 4 HOH HOH 482 U WAT 117 4 HOH HOH 483 U WAT 119 4 HOH HOH 484 U WAT 120 4 HOH HOH 485 U WAT 125 4 HOH HOH 486 U WAT 126 4 HOH HOH 487 U WAT 127 4 HOH HOH 488 U WAT 128 4 HOH HOH 489 U WAT 129 4 HOH HOH 490 U WAT 154 4 HOH HOH 491 U WAT 159 4 HOH HOH 492 U WAT 160 4 HOH HOH 493 U WAT 167 4 HOH HOH 494 U WAT 168 4 HOH HOH 495 U n 1 1 U n 2 2 U n 3 3 U n 4 4 U n 5 5 U n 6 6 U n 7 7 U n 8 8 U n 9 9 U n 10 10 U n 11 11 U n 12 12 U n 13 13 U n 14 14 U n 15 15 U ILE 16 n 16 ILE 16 U ILE 17 n 17 ILE 17 U GLY 18 n 18 GLY 18 U GLY 19 n 19 GLY 19 U GLU 20 n 20 GLU 20 U PHE 21 n 21 PHE 21 U THR 22 n 22 THR 22 U THR 23 n 23 THR 23 U ILE 24 n 24 ILE 24 U GLU 25 n 25 GLU 25 U ASN 26 n 26 ASN 26 U GLN 27 n 27 GLN 27 U PRO 28 n 28 PRO 28 U TRP 29 n 29 TRP 29 U PHE 30 n 30 PHE 30 U ALA 31 n 31 ALA 31 U ALA 32 n 32 ALA 32 U ILE 33 n 33 ILE 33 U TYR 34 n 34 TYR 34 U ARG 35 n 35 ARG 35 U ARG 36 n 36 ARG 36 U HIS 37 n 37 HIS 37 U ARG 37 n 38 A ARG 37 U GLY 37 n 39 B GLY 37 U GLY 37 n 40 C GLY 37 U SER 37 n 41 D SER 37 U VAL 38 n 42 VAL 38 U THR 39 n 43 THR 39 U TYR 40 n 44 TYR 40 U VAL 41 n 45 VAL 41 U CYS 42 n 46 CYS 42 U GLY 43 n 47 GLY 43 U GLY 44 n 48 GLY 44 U SER 45 n 49 SER 45 U LEU 46 n 50 LEU 46 U ILE 47 n 51 ILE 47 U SER 48 n 52 SER 48 U PRO 49 n 53 PRO 49 U CYS 50 n 54 CYS 50 U TRP 51 n 55 TRP 51 U VAL 52 n 56 VAL 52 U ILE 53 n 57 ILE 53 U SER 54 n 58 SER 54 U ALA 55 n 59 ALA 55 U THR 56 n 60 THR 56 U HIS 57 n 61 HIS 57 U CYS 58 n 62 CYS 58 U PHE 59 n 63 PHE 59 U ILE 60 n 64 ILE 60 U ASP 60 n 65 A ASP 60 U TYR 60 n 66 B TYR 60 U PRO 60 n 67 C PRO 60 U LYS 61 n 68 LYS 61 U LYS 62 n 69 LYS 62 U GLU 62 n 70 A GLU 62 U ASP 63 n 71 ASP 63 U TYR 64 n 72 TYR 64 U ILE 65 n 73 ILE 65 U VAL 66 n 74 VAL 66 U TYR 67 n 75 TYR 67 U LEU 68 n 76 LEU 68 U GLY 69 n 77 GLY 69 U ARG 70 n 78 ARG 70 U SER 71 n 79 SER 71 U ARG 72 n 80 ARG 72 U LEU 73 n 81 LEU 73 U ASN 74 n 82 ASN 74 U SER 75 n 83 SER 75 U ASN 76 n 84 ASN 76 U THR 77 n 85 THR 77 U GLN 78 n 86 GLN 78 U GLY 79 n 87 GLY 79 U GLU 80 n 88 GLU 80 U MET 81 n 89 MET 81 U LYS 82 n 90 LYS 82 U PHE 83 n 91 PHE 83 U GLU 84 n 92 GLU 84 U VAL 85 n 93 VAL 85 U GLU 86 n 94 GLU 86 U ASN 87 n 95 ASN 87 U LEU 88 n 96 LEU 88 U ILE 89 n 97 ILE 89 U LEU 90 n 98 LEU 90 U HIS 91 n 99 HIS 91 U LYS 92 n 100 LYS 92 U ASP 93 n 101 ASP 93 U TYR 94 n 102 TYR 94 U SER 95 n 103 SER 95 U ALA 96 n 104 ALA 96 U ASP 97 n 105 ASP 97 U THR 97 n 106 A THR 97 U LEU 97 n 107 B LEU 97 U ALA 98 n 108 ALA 98 U HIS 99 n 109 HIS 99 U HIS 100 n 110 HIS 100 U ASN 101 n 111 ASN 101 U ASP 102 n 112 ASP 102 U ILE 103 n 113 ILE 103 U ALA 104 n 114 ALA 104 U LEU 105 n 115 LEU 105 U LEU 106 n 116 LEU 106 U LYS 107 n 117 LYS 107 U ILE 108 n 118 ILE 108 U ARG 109 n 119 ARG 109 U SER 110 n 120 SER 110 U LYS 110 n 121 A LYS 110 U GLU 110 n 122 B GLU 110 U GLY 110 n 123 C GLY 110 U ARG 110 n 124 D ARG 110 U CYS 111 n 125 CYS 111 U ALA 112 n 126 ALA 112 U GLN 113 n 127 GLN 113 U PRO 114 n 128 PRO 114 U SER 115 n 129 SER 115 U ARG 116 n 130 ARG 116 U THR 117 n 131 THR 117 U ILE 118 n 132 ILE 118 U GLN 119 n 133 GLN 119 U THR 120 n 134 THR 120 U ILE 121 n 135 ILE 121 U SER 122 n 136 SER 122 U LEU 123 n 137 LEU 123 U PRO 124 n 138 PRO 124 U SER 125 n 139 SER 125 U MET 126 n 140 MET 126 U TYR 127 n 141 TYR 127 U ASN 128 n 142 ASN 128 U ASP 129 n 143 ASP 129 U PRO 130 n 144 PRO 130 U GLN 131 n 145 GLN 131 U PHE 132 n 146 PHE 132 U GLY 133 n 147 GLY 133 U THR 134 n 148 THR 134 U SER 135 n 149 SER 135 U CYS 136 n 150 CYS 136 U GLU 137 n 151 GLU 137 U ILE 138 n 152 ILE 138 U THR 139 n 153 THR 139 U GLY 140 n 154 GLY 140 U PHE 141 n 155 PHE 141 U GLY 142 n 156 GLY 142 U LYS 143 n 157 LYS 143 U GLU 144 n 158 GLU 144 U ASN 145 n 159 ASN 145 U SER 146 n 160 SER 146 U THR 147 n 161 THR 147 U ASP 148 n 162 ASP 148 U TYR 149 n 163 TYR 149 U LEU 150 n 164 LEU 150 U TYR 151 n 165 TYR 151 U PRO 152 n 166 PRO 152 U GLU 153 n 167 GLU 153 U GLN 154 n 168 GLN 154 U LEU 155 n 169 LEU 155 U LYS 156 n 170 LYS 156 U MET 157 n 171 MET 157 U THR 158 n 172 THR 158 U VAL 159 n 173 VAL 159 U VAL 160 n 174 VAL 160 U LYS 161 n 175 LYS 161 U LEU 162 n 176 LEU 162 U ILE 163 n 177 ILE 163 U SER 164 n 178 SER 164 U HIS 165 n 179 HIS 165 U ARG 166 n 180 ARG 166 U GLU 167 n 181 GLU 167 U CYS 168 n 182 CYS 168 U GLN 169 n 183 GLN 169 U GLN 170 n 184 GLN 170 U PRO 170 n 185 A PRO 170 U HIS 170 n 186 B HIS 170 U TYR 171 n 187 TYR 171 U TYR 172 n 188 TYR 172 U GLY 173 n 189 GLY 173 U SER 174 n 190 SER 174 U GLU 175 n 191 GLU 175 U VAL 176 n 192 VAL 176 U THR 177 n 193 THR 177 U THR 178 n 194 THR 178 U LYS 179 n 195 LYS 179 U MET 180 n 196 MET 180 U LEU 181 n 197 LEU 181 U CYS 182 n 198 CYS 182 U ALA 183 n 199 ALA 183 U ALA 184 n 200 ALA 184 U ASP 185 n 201 ASP 185 U PRO 185 n 202 A PRO 185 U GLN 185 n 203 B GLN 185 U TRP 186 n 204 TRP 186 U LYS 187 n 205 LYS 187 U THR 188 n 206 THR 188 U ASP 189 n 207 ASP 189 U SER 190 n 208 SER 190 U CYS 191 n 209 CYS 191 U GLN 192 n 210 GLN 192 U GLY 193 n 211 GLY 193 U ASP 194 n 212 ASP 194 U SER 195 n 213 SER 195 U GLY 196 n 214 GLY 196 U GLY 197 n 215 GLY 197 U PRO 198 n 216 PRO 198 U LEU 199 n 217 LEU 199 U VAL 200 n 218 VAL 200 U CYS 201 n 219 CYS 201 U SER 202 n 220 SER 202 U LEU 203 n 221 LEU 203 U GLN 204 n 222 GLN 204 U GLY 205 n 223 GLY 205 U ARG 206 n 224 ARG 206 U MET 207 n 225 MET 207 U THR 208 n 226 THR 208 U LEU 209 n 227 LEU 209 U THR 210 n 228 THR 210 U GLY 211 n 229 GLY 211 U ILE 212 n 230 ILE 212 U VAL 213 n 231 VAL 213 U SER 214 n 232 SER 214 U TRP 215 n 233 TRP 215 U GLY 216 n 234 GLY 216 U ARG 217 n 235 ARG 217 U GLY 219 n 236 GLY 219 U CYS 220 n 237 CYS 220 U ALA 221 n 238 ALA 221 U LEU 222 n 239 LEU 222 U LYS 223 n 240 LYS 223 U ASP 223 n 241 A ASP 223 U LYS 224 n 242 LYS 224 U PRO 225 n 243 PRO 225 U GLY 226 n 244 GLY 226 U VAL 227 n 245 VAL 227 U TYR 228 n 246 TYR 228 U THR 229 n 247 THR 229 U ARG 230 n 248 ARG 230 U VAL 231 n 249 VAL 231 U SER 232 n 250 SER 232 U HIS 233 n 251 HIS 233 U PHE 234 n 252 PHE 234 U LEU 235 n 253 LEU 235 U PRO 236 n 254 PRO 236 U TRP 237 n 255 TRP 237 U ILE 238 n 256 ILE 238 U ARG 239 n 257 ARG 239 U SER 240 n 258 SER 240 U HIS 241 n 259 HIS 241 U THR 242 n 260 THR 242 U LYS 243 n 261 LYS 243 U GLU 244 n 262 GLU 244 U author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 U N GLU 20 A N GLU 20 U O MET 157 A O MET 171 U N LYS 161 A N LYS 175 U O ALA 184 A O ALA 200 U N LEU 181 A N LEU 197 U O TYR 228 A O TYR 246 U O VAL 227 A O VAL 245 U N TRP 215 A N TRP 233 U O THR 208 A O THR 226 U N CYS 201 A N CYS 219 U O VAL 200 A O VAL 218 U N GLU 137 A N GLU 151 U N CYS 136 A N CYS 150 U O VAL 160 A O VAL 174 U N ALA 31 A N ALA 31 U O GLY 44 A O GLY 48 U N SER 45 A N SER 49 U O ILE 53 A O ILE 57 U N SER 54 A N SER 58 U O ALA 104 A O ALA 114 U O LEU 105 A O LEU 115 U N ILE 89 A N ILE 97 U O MET 81 A O MET 89 U N LEU 68 A N LEU 76 U O ILE 65 A O ILE 73 U N TYR 34 A N TYR 34 U N SER 95 A N SER 103 U O HIS 100 A O HIS 110 1 U LEU 1 A LEU 1 1 Y 1 U LYS 2 A LYS 2 1 Y 1 U PHE 3 A PHE 3 1 Y 1 U GLN 4 A GLN 4 1 Y 1 U CYS 5 A CYS 5 1 Y 1 U GLY 6 A GLY 6 1 Y 1 U GLN 7 A GLN 7 1 Y 1 U LYS 8 A LYS 8 1 Y 1 U THR 9 A THR 9 1 Y 1 U LEU 10 A LEU 10 1 Y 1 U ARG 11 A ARG 11 1 Y 1 U PRO 12 A PRO 12 1 Y 1 U ARG 13 A ARG 13 1 Y 1 U PHE 14 A PHE 14 1 Y 1 U LYS 15 A LYS 15 1 Y 1 U SER 54 -149.26 -152.41 1 U ASP 97 -103.42 -156.83 1 U TYR 171 -98.07 -102.26 1 U ARG 206 176.45 129.28 1 U LYS 243 -75.62 -96.85 protein_rep.param protein.top dna-rna_rep.param dna-rna.top water_rep.param water.top ion.param ion.top 464.param 464.top 0.247 0.191 2.4 500 9837 1 MOLECULAR REPLACEMENT PDB Entry 1F5K Engh & Huber 2.4 500 92 2094 50 0 1952 1.931 1.5 3.113 2.0 3.207 2.0 4.958 2.5 0.247 0.191 99.5 2.4 22.3 1VJ9 0.13 1 data reduction MOSFLM data scaling SCALA phasing AMoRE refinement CNS data scaling CCP4 (SCALA) Urokinase Plasminogen Activator B-Chain-JT464 Complex 1 N N 2 N N 2 N N 3 N N 4 N N U THR 23 A THR 23 HELX_P U GLN 27 A GLN 27 5 1 5 U ALA 55 A ALA 59 HELX_P U PHE 59 A PHE 63 5 2 5 U LYS 61 A LYS 68 HELX_P U GLU 62 A GLU 70 5 3 3 A U SER 164 A SER 178 HELX_P U GLN 169 A GLN 183 1 4 6 U TYR 172 A TYR 188 HELX_P U VAL 176 A VAL 192 5 5 5 U PHE 234 A PHE 252 HELX_P U THR 242 A THR 260 1 6 9 disulf 2.026 U CYS 42 A SG CYS 46 1_555 U CYS 58 A SG CYS 62 1_555 disulf 2.033 U CYS 50 A SG CYS 54 1_555 U CYS 111 A SG CYS 125 1_555 disulf 2.026 U CYS 136 A SG CYS 150 1_555 U CYS 201 A SG CYS 219 1_555 disulf 2.023 U CYS 168 A SG CYS 182 1_555 U CYS 182 A SG CYS 198 1_555 disulf 2.029 U CYS 191 A SG CYS 209 1_555 U CYS 220 A SG CYS 237 1_555 HYDROLASE UROKINASE, INHIBITOR, SERINE PROTEASE, HUMAN, HYDROLASE UROK_HUMAN UNP 1 164 P00749 LKFQCGQKTLRPRFKIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLISPCWVISATHCFIDYPKKEDYIVYLGRSR LNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENS TDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALK DKPGVYTRVSHFLPWIRSHTKE 164 425 1VJ9 1 244 P00749 U 1 1 262 1 CYS engineered mutation SER 122 1VJ9 U P00749 UNP 299 136 8 7 2 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel U GLU 20 A GLU 20 U PHE 21 A PHE 21 U LYS 156 A LYS 170 U ILE 163 A ILE 177 U MET 180 A MET 196 U ALA 184 A ALA 200 U GLY 226 A GLY 244 U ARG 230 A ARG 248 U MET 207 A MET 225 U TRP 215 A TRP 233 U PRO 198 A PRO 216 U SER 202 A SER 220 U SER 135 A SER 149 U GLY 140 A GLY 154 U LYS 156 A LYS 170 U ILE 163 A ILE 177 U PHE 30 A PHE 30 U ARG 36 A ARG 36 U VAL 38 A VAL 42 U SER 48 A SER 52 U TRP 51 A TRP 55 U SER 54 A SER 58 U ALA 104 A ALA 114 U ARG 109 A ARG 119 U MET 81 A MET 89 U LEU 90 A LEU 98 U TYR 64 A TYR 72 U LEU 68 A LEU 76 U PHE 30 A PHE 30 U ARG 36 A ARG 36 U SER 95 A SER 103 U ALA 96 A ALA 104 U HIS 99 A HIS 109 U HIS 100 A HIS 110 BINDING SITE FOR RESIDUE SO4 U 401 U SO4 401 Software 7 BINDING SITE FOR RESIDUE SO4 U 403 U SO4 403 Software 5 BINDING SITE FOR RESIDUE 5IN U 300 U 5IN 300 Software 16 U LYS 61 A LYS 68 7 4_556 U HIS 100 A HIS 110 7 1_555 U THR 177 A THR 193 7 1_555 U LYS 179 A LYS 195 7 1_555 U MET 180 A MET 196 7 1_555 U HOH 429 E HOH 7 1_555 U HOH 468 E HOH 7 1_555 U HIS 57 A HIS 61 5 1_555 U GLN 192 A GLN 210 5 1_555 U GLY 193 A GLY 211 5 1_555 U SER 195 A SER 213 5 1_555 U 5IN 300 D 5IN 5 1_555 U LEU 97 A LEU 107 B 16 1_555 U HIS 99 A HIS 109 16 1_555 U ASP 189 A ASP 207 16 1_555 U SER 190 A SER 208 16 1_555 U GLN 192 A GLN 210 16 1_555 U SER 195 A SER 213 16 1_555 U VAL 213 A VAL 231 16 1_555 U SER 214 A SER 232 16 1_555 U TRP 215 A TRP 233 16 1_555 U GLY 216 A GLY 234 16 1_555 U ARG 217 A ARG 235 16 1_555 U GLY 219 A GLY 236 16 1_555 U GLY 226 A GLY 244 16 1_555 U SO4 403 C SO4 16 1_555 U HOH 430 E HOH 16 1_555 U HOH 493 E HOH 16 1_555 19 P 21 21 21