0.0219
0.0000
0.0000
0.0000
0.0292
0.0000
0.0000
0.0000
0.0127
0.0000
0.0000
0.0000
2004-02-20
initial release
Wesenberg, G.E.
Smith, D.W.
Phillips Jr., G.N.
Johnson, K.A.
Bingman, C.A.
Center for Eukaryotic Structural Genomics (CESG)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.000
90.008
90.000
45.681
34.261
78.597
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
O
N
235
N
C
N
236
N
C
N
237
N
SE
N
238
N
C
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
N
Y
330
N
C
Y
331
N
C
Y
332
N
C
Y
333
N
C
Y
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
N
N
349
S
C
N
350
N
C
N
351
N
O
N
352
N
C
Y
353
N
C
Y
354
N
C
Y
355
N
C
Y
356
N
C
Y
357
N
C
Y
358
N
C
N
359
N
O
N
360
N
O
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
C
N
378
N
C
N
379
N
O
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
Y
322
N
sing
Y
323
N
sing
N
324
N
sing
Y
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
doub
N
329
N
sing
Y
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
doub
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
Y
345
N
doub
Y
346
N
sing
Y
347
N
sing
N
348
N
sing
Y
349
N
doub
N
350
N
sing
Y
351
N
doub
N
352
N
sing
Y
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
doub
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
NE
J.Biomol.Nmr
JBNME9
0800
0925-2738
32
335
335
10.1007/s10858-005-8205-4
16211487
1H, 15N and 13C resonance assignments of the putative Bet v 1 family protein At1g24000.1 from Arabidopsis thaliana.
2005
10.2210/pdb1vjh/pdb
pdb_00001vjh
1
CCD
2003-12-01
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
0.97921
1.0
32-ID
APS
0.97921
SYNCHROTRON
APS BEAMLINE 32-ID
13873.567
Bet v I allergen family
2
man
polymer
18.015
water
106
nat
water
no
yes
STLKGALSVKFDVKCPADKFFSAFVEDTNRPFEKNGKTEIEAVDLVKKT(MSE)TIQ(MSE)SGSEIQKYFKTLKGSIAV
TPIGVGDGSHVVWTFHFEKVHKDIDDPHSIIDESVKYFKKLDEAILNFKE
STLKGALSVKFDVKCPADKFFSAFVEDTNRPFEKNGKTEIEAVDLVKKTMTIQMSGSEIQKYFKTLKGSIAVTPIGVGDG
SHVVWTFHFEKVHKDIDDPHSIIDESVKYFKKLDEAILNFKE
A,B
GO.5358
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
thale cress
Arabidopsis
Escherichia
sample
At1g24000
3702
Arabidopsis thaliana
562
Escherichia coli
2.22
44.49
hanging drop
7.5
Sodium Malonate, Sodium HEPES, DMEPEG 550,
pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K, hanging drop
295
Center for Eukaryotic Structural Genomics
CESG
PSI, Protein Structure Initiative
software
chem_comp_atom
chem_comp_bond
database_2
struct_conn
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Refinement description
Data collection
Database references
Derived calculations
1
0
2004-03-16
1
1
2008-02-01
1
2
2011-07-13
1
3
2017-10-04
1
4
2023-12-27
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
_struct_ref_seq_dif.details
BIOMOLECULE:
THIS ENTRY CONTAINS THE CRYSTALLOGRAPHIC ASYMMETRIC UNIT
WHICH CONSISTS OF 2 CHAIN(S). THE AUTHORS ARE UNCERTAIN
OF THE BIOLOGICAL UNIT.
Y
RCSB
Y
RCSB
2004-02-20
REL
REL
HOH
water
HOH
1
2
HOH
HOH
123
A
HOH
2
2
HOH
HOH
124
A
HOH
4
2
HOH
HOH
125
A
HOH
5
2
HOH
HOH
126
A
HOH
7
2
HOH
HOH
127
A
HOH
9
2
HOH
HOH
128
A
HOH
11
2
HOH
HOH
129
A
HOH
12
2
HOH
HOH
130
A
HOH
13
2
HOH
HOH
131
A
HOH
15
2
HOH
HOH
132
A
HOH
16
2
HOH
HOH
133
A
HOH
17
2
HOH
HOH
134
A
HOH
22
2
HOH
HOH
135
A
HOH
24
2
HOH
HOH
136
A
HOH
27
2
HOH
HOH
137
A
HOH
28
2
HOH
HOH
138
A
HOH
32
2
HOH
HOH
139
A
HOH
33
2
HOH
HOH
140
A
HOH
34
2
HOH
HOH
141
A
HOH
35
2
HOH
HOH
142
A
HOH
36
2
HOH
HOH
143
A
HOH
37
2
HOH
HOH
144
A
HOH
38
2
HOH
HOH
145
A
HOH
39
2
HOH
HOH
146
A
HOH
41
2
HOH
HOH
147
A
HOH
43
2
HOH
HOH
148
A
HOH
44
2
HOH
HOH
149
A
HOH
46
2
HOH
HOH
150
A
HOH
48
2
HOH
HOH
151
A
HOH
57
2
HOH
HOH
152
A
HOH
58
2
HOH
HOH
153
A
HOH
59
2
HOH
HOH
154
A
HOH
60
2
HOH
HOH
155
A
HOH
61
2
HOH
HOH
156
A
HOH
64
2
HOH
HOH
157
A
HOH
65
2
HOH
HOH
158
A
HOH
66
2
HOH
HOH
159
A
HOH
67
2
HOH
HOH
160
A
HOH
68
2
HOH
HOH
161
A
HOH
69
2
HOH
HOH
162
A
HOH
70
2
HOH
HOH
163
A
HOH
71
2
HOH
HOH
164
A
HOH
72
2
HOH
HOH
165
A
HOH
73
2
HOH
HOH
166
A
HOH
74
2
HOH
HOH
167
A
HOH
75
2
HOH
HOH
168
A
HOH
76
2
HOH
HOH
169
A
HOH
77
2
HOH
HOH
170
A
HOH
80
2
HOH
HOH
171
A
HOH
83
2
HOH
HOH
172
A
HOH
84
2
HOH
HOH
173
A
HOH
85
2
HOH
HOH
174
A
HOH
86
2
HOH
HOH
175
A
HOH
87
2
HOH
HOH
176
A
HOH
88
2
HOH
HOH
177
A
HOH
89
2
HOH
HOH
178
A
HOH
90
2
HOH
HOH
179
A
HOH
91
2
HOH
HOH
180
A
HOH
92
2
HOH
HOH
181
A
HOH
93
2
HOH
HOH
182
A
HOH
94
2
HOH
HOH
183
A
HOH
95
2
HOH
HOH
184
A
HOH
96
2
HOH
HOH
185
A
HOH
97
2
HOH
HOH
186
A
HOH
98
2
HOH
HOH
187
A
HOH
99
2
HOH
HOH
188
A
HOH
3
2
HOH
HOH
123
B
HOH
6
2
HOH
HOH
124
B
HOH
8
2
HOH
HOH
125
B
HOH
10
2
HOH
HOH
126
B
HOH
14
2
HOH
HOH
127
B
HOH
18
2
HOH
HOH
128
B
HOH
19
2
HOH
HOH
129
B
HOH
20
2
HOH
HOH
130
B
HOH
21
2
HOH
HOH
131
B
HOH
23
2
HOH
HOH
132
B
HOH
25
2
HOH
HOH
133
B
HOH
26
2
HOH
HOH
134
B
HOH
29
2
HOH
HOH
135
B
HOH
30
2
HOH
HOH
136
B
HOH
31
2
HOH
HOH
137
B
HOH
40
2
HOH
HOH
138
B
HOH
42
2
HOH
HOH
139
B
HOH
45
2
HOH
HOH
140
B
HOH
47
2
HOH
HOH
141
B
HOH
49
2
HOH
HOH
142
B
HOH
50
2
HOH
HOH
143
B
HOH
51
2
HOH
HOH
144
B
HOH
52
2
HOH
HOH
145
B
HOH
53
2
HOH
HOH
146
B
HOH
54
2
HOH
HOH
147
B
HOH
55
2
HOH
HOH
148
B
HOH
56
2
HOH
HOH
149
B
HOH
62
2
HOH
HOH
150
B
HOH
63
2
HOH
HOH
151
B
HOH
78
2
HOH
HOH
152
B
HOH
79
2
HOH
HOH
153
B
HOH
81
2
HOH
HOH
154
B
HOH
82
2
HOH
HOH
155
B
HOH
100
2
HOH
HOH
156
B
HOH
101
2
HOH
HOH
157
B
HOH
102
2
HOH
HOH
158
B
HOH
103
2
HOH
HOH
159
B
HOH
104
2
HOH
HOH
160
B
HOH
105
2
HOH
HOH
161
B
HOH
106
2
HOH
HOH
162
B
9.248
0.000
11.819
SE
15.8
2.38
44.498
17.481
24.397
SE
28.1
1.90
3.519
25.818
21.587
SE
16.0
2.14
9.394
8.319
6.505
SE
26.5
1.94
0.45
700
0.47
1185
0.48
1531
0.49
1808
0.49
1975
0.47
2189
0.45
2373
0.36
2463
0.66
0.67
0.56
14229
13044
1185
0.87
0.87
0.62
648
508
140
0.87
0.88
0.77
1935
1703
232
0.80
0.81
0.63
2439
2216
223
0.68
0.70
0.53
2410
2235
175
0.58
0.59
0.45
4228
3961
267
0.44
0.45
0.33
2569
2421
148
SER
1
n
1
SER
1
A
THR
2
n
2
THR
2
A
LEU
3
n
3
LEU
3
A
LYS
4
n
4
LYS
4
A
GLY
5
n
5
GLY
5
A
ALA
6
n
6
ALA
6
A
LEU
7
n
7
LEU
7
A
SER
8
n
8
SER
8
A
VAL
9
n
9
VAL
9
A
LYS
10
n
10
LYS
10
A
PHE
11
n
11
PHE
11
A
ASP
12
n
12
ASP
12
A
VAL
13
n
13
VAL
13
A
LYS
14
n
14
LYS
14
A
CYS
15
n
15
CYS
15
A
PRO
16
n
16
PRO
16
A
ALA
17
n
17
ALA
17
A
ASP
18
n
18
ASP
18
A
LYS
19
n
19
LYS
19
A
PHE
20
n
20
PHE
20
A
PHE
21
n
21
PHE
21
A
SER
22
n
22
SER
22
A
ALA
23
n
23
ALA
23
A
PHE
24
n
24
PHE
24
A
VAL
25
n
25
VAL
25
A
GLU
26
n
26
GLU
26
A
ASP
27
n
27
ASP
27
A
THR
28
n
28
THR
28
A
ASN
29
n
29
ASN
29
A
ARG
30
n
30
ARG
30
A
PRO
31
n
31
PRO
31
A
PHE
32
n
32
PHE
32
A
GLU
33
n
33
GLU
33
A
LYS
34
n
34
LYS
34
A
ASN
35
n
35
ASN
35
A
GLY
36
n
36
GLY
36
A
LYS
37
n
37
LYS
37
A
THR
38
n
38
THR
38
A
GLU
39
n
39
GLU
39
A
ILE
40
n
40
ILE
40
A
GLU
41
n
41
GLU
41
A
ALA
42
n
42
ALA
42
A
VAL
43
n
43
VAL
43
A
ASP
44
n
44
ASP
44
A
LEU
45
n
45
LEU
45
A
VAL
46
n
46
VAL
46
A
LYS
47
n
47
LYS
47
A
LYS
48
n
48
LYS
48
A
THR
49
n
49
THR
49
A
MSE
50
n
50
MSE
50
A
THR
51
n
51
THR
51
A
ILE
52
n
52
ILE
52
A
GLN
53
n
53
GLN
53
A
MSE
54
n
54
MSE
54
A
SER
55
n
55
SER
55
A
GLY
56
n
56
GLY
56
A
SER
57
n
57
SER
57
A
GLU
58
n
58
GLU
58
A
ILE
59
n
59
ILE
59
A
GLN
60
n
60
GLN
60
A
LYS
61
n
61
LYS
61
A
TYR
62
n
62
TYR
62
A
PHE
63
n
63
PHE
63
A
LYS
64
n
64
LYS
64
A
THR
65
n
65
THR
65
A
LEU
66
n
66
LEU
66
A
LYS
67
n
67
LYS
67
A
GLY
68
n
68
GLY
68
A
SER
69
n
69
SER
69
A
ILE
70
n
70
ILE
70
A
ALA
71
n
71
ALA
71
A
VAL
72
n
72
VAL
72
A
THR
73
n
73
THR
73
A
PRO
74
n
74
PRO
74
A
ILE
75
n
75
ILE
75
A
GLY
76
n
76
GLY
76
A
VAL
77
n
77
VAL
77
A
GLY
78
n
78
GLY
78
A
ASP
79
n
79
ASP
79
A
GLY
80
n
80
GLY
80
A
SER
81
n
81
SER
81
A
HIS
82
n
82
HIS
82
A
VAL
83
n
83
VAL
83
A
VAL
84
n
84
VAL
84
A
TRP
85
n
85
TRP
85
A
THR
86
n
86
THR
86
A
PHE
87
n
87
PHE
87
A
HIS
88
n
88
HIS
88
A
PHE
89
n
89
PHE
89
A
GLU
90
n
90
GLU
90
A
LYS
91
n
91
LYS
91
A
VAL
92
n
92
VAL
92
A
HIS
93
n
93
HIS
93
A
LYS
94
n
94
LYS
94
A
ASP
95
n
95
ASP
95
A
ILE
96
n
96
ILE
96
A
ASP
97
n
97
ASP
97
A
ASP
98
n
98
ASP
98
A
PRO
99
n
99
PRO
99
A
HIS
100
n
100
HIS
100
A
SER
101
n
101
SER
101
A
ILE
102
n
102
ILE
102
A
ILE
103
n
103
ILE
103
A
ASP
104
n
104
ASP
104
A
GLU
105
n
105
GLU
105
A
SER
106
n
106
SER
106
A
VAL
107
n
107
VAL
107
A
LYS
108
n
108
LYS
108
A
TYR
109
n
109
TYR
109
A
PHE
110
n
110
PHE
110
A
LYS
111
n
111
LYS
111
A
LYS
112
n
112
LYS
112
A
LEU
113
n
113
LEU
113
A
ASP
114
n
114
ASP
114
A
GLU
115
n
115
GLU
115
A
ALA
116
n
116
ALA
116
A
ILE
117
n
117
ILE
117
A
LEU
118
n
118
LEU
118
A
ASN
119
n
119
ASN
119
A
PHE
120
n
120
PHE
120
A
n
121
121
A
n
122
122
A
SER
1
n
1
SER
1
B
THR
2
n
2
THR
2
B
LEU
3
n
3
LEU
3
B
LYS
4
n
4
LYS
4
B
GLY
5
n
5
GLY
5
B
ALA
6
n
6
ALA
6
B
LEU
7
n
7
LEU
7
B
SER
8
n
8
SER
8
B
VAL
9
n
9
VAL
9
B
LYS
10
n
10
LYS
10
B
PHE
11
n
11
PHE
11
B
ASP
12
n
12
ASP
12
B
VAL
13
n
13
VAL
13
B
LYS
14
n
14
LYS
14
B
CYS
15
n
15
CYS
15
B
PRO
16
n
16
PRO
16
B
ALA
17
n
17
ALA
17
B
ASP
18
n
18
ASP
18
B
LYS
19
n
19
LYS
19
B
PHE
20
n
20
PHE
20
B
PHE
21
n
21
PHE
21
B
SER
22
n
22
SER
22
B
ALA
23
n
23
ALA
23
B
PHE
24
n
24
PHE
24
B
VAL
25
n
25
VAL
25
B
GLU
26
n
26
GLU
26
B
ASP
27
n
27
ASP
27
B
THR
28
n
28
THR
28
B
ASN
29
n
29
ASN
29
B
ARG
30
n
30
ARG
30
B
PRO
31
n
31
PRO
31
B
PHE
32
n
32
PHE
32
B
GLU
33
n
33
GLU
33
B
LYS
34
n
34
LYS
34
B
ASN
35
n
35
ASN
35
B
GLY
36
n
36
GLY
36
B
LYS
37
n
37
LYS
37
B
THR
38
n
38
THR
38
B
GLU
39
n
39
GLU
39
B
ILE
40
n
40
ILE
40
B
GLU
41
n
41
GLU
41
B
ALA
42
n
42
ALA
42
B
VAL
43
n
43
VAL
43
B
ASP
44
n
44
ASP
44
B
LEU
45
n
45
LEU
45
B
VAL
46
n
46
VAL
46
B
LYS
47
n
47
LYS
47
B
LYS
48
n
48
LYS
48
B
THR
49
n
49
THR
49
B
MSE
50
n
50
MSE
50
B
THR
51
n
51
THR
51
B
ILE
52
n
52
ILE
52
B
GLN
53
n
53
GLN
53
B
MSE
54
n
54
MSE
54
B
SER
55
n
55
SER
55
B
GLY
56
n
56
GLY
56
B
SER
57
n
57
SER
57
B
GLU
58
n
58
GLU
58
B
ILE
59
n
59
ILE
59
B
GLN
60
n
60
GLN
60
B
LYS
61
n
61
LYS
61
B
TYR
62
n
62
TYR
62
B
PHE
63
n
63
PHE
63
B
LYS
64
n
64
LYS
64
B
THR
65
n
65
THR
65
B
LEU
66
n
66
LEU
66
B
LYS
67
n
67
LYS
67
B
GLY
68
n
68
GLY
68
B
SER
69
n
69
SER
69
B
ILE
70
n
70
ILE
70
B
ALA
71
n
71
ALA
71
B
VAL
72
n
72
VAL
72
B
THR
73
n
73
THR
73
B
PRO
74
n
74
PRO
74
B
ILE
75
n
75
ILE
75
B
GLY
76
n
76
GLY
76
B
VAL
77
n
77
VAL
77
B
GLY
78
n
78
GLY
78
B
ASP
79
n
79
ASP
79
B
GLY
80
n
80
GLY
80
B
SER
81
n
81
SER
81
B
HIS
82
n
82
HIS
82
B
VAL
83
n
83
VAL
83
B
VAL
84
n
84
VAL
84
B
TRP
85
n
85
TRP
85
B
THR
86
n
86
THR
86
B
PHE
87
n
87
PHE
87
B
HIS
88
n
88
HIS
88
B
PHE
89
n
89
PHE
89
B
GLU
90
n
90
GLU
90
B
LYS
91
n
91
LYS
91
B
VAL
92
n
92
VAL
92
B
HIS
93
n
93
HIS
93
B
LYS
94
n
94
LYS
94
B
ASP
95
n
95
ASP
95
B
ILE
96
n
96
ILE
96
B
ASP
97
n
97
ASP
97
B
ASP
98
n
98
ASP
98
B
PRO
99
n
99
PRO
99
B
HIS
100
n
100
HIS
100
B
SER
101
n
101
SER
101
B
ILE
102
n
102
ILE
102
B
ILE
103
n
103
ILE
103
B
ASP
104
n
104
ASP
104
B
GLU
105
n
105
GLU
105
B
SER
106
n
106
SER
106
B
VAL
107
n
107
VAL
107
B
LYS
108
n
108
LYS
108
B
TYR
109
n
109
TYR
109
B
PHE
110
n
110
PHE
110
B
LYS
111
n
111
LYS
111
B
LYS
112
n
112
LYS
112
B
LEU
113
n
113
LEU
113
B
ASP
114
n
114
ASP
114
B
GLU
115
n
115
GLU
115
B
ALA
116
n
116
ALA
116
B
ILE
117
n
117
ILE
117
B
LEU
118
n
118
LEU
118
B
ASN
119
n
119
ASN
119
B
PHE
120
n
120
PHE
120
B
n
121
121
B
n
122
122
B
author_defined_assembly
2
dimeric
A
MSE
50
SELENOMETHIONINE
A
MSE
50
MET
A
MSE
54
SELENOMETHIONINE
A
MSE
54
MET
B
MSE
50
SELENOMETHIONINE
B
MSE
50
MET
B
MSE
54
SELENOMETHIONINE
B
MSE
54
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
LEU
7
A
N
LEU
7
A
O
PHE
87
A
O
PHE
87
A
O
HIS
82
A
O
HIS
82
A
N
THR
73
A
N
THR
73
A
O
GLY
68
A
O
GLY
68
A
N
ILE
52
A
N
ILE
52
A
O
GLN
53
A
O
GLN
53
A
N
GLU
39
A
N
GLU
39
B
N
LEU
7
B
N
LEU
7
B
O
PHE
87
B
O
PHE
87
B
O
HIS
88
B
O
HIS
88
B
N
LYS
67
B
N
LYS
67
B
O
LEU
66
B
O
LEU
66
B
N
MSE
54
B
N
MSE
54
B
O
GLN
53
B
O
GLN
53
B
N
GLU
39
B
N
GLU
39
1
A
HOH
166
C
HOH
1
A
LYS
121
A
LYS
121
1
Y
1
A
GLU
122
A
GLU
122
1
Y
1
B
LYS
121
B
LYS
121
1
Y
1
B
GLU
122
B
GLU
122
1
Y
1
A
A
OD1
O
ASP
HOH
18
150
2.04
1
6.65
0.90
118.30
124.95
A
A
A
CB
CG
OD2
ASP
ASP
ASP
12
12
12
N
1
5.47
0.90
118.30
123.77
A
A
A
CB
CG
OD2
ASP
ASP
ASP
79
79
79
N
1
6.31
0.90
118.30
124.61
A
A
A
CB
CG
OD2
ASP
ASP
ASP
95
95
95
N
1
6.76
0.90
118.30
125.06
B
B
B
CB
CG
OD2
ASP
ASP
ASP
12
12
12
N
1
B
ASN
119
-89.00
37.96
2.100
30.000
0.45
14224
24.432
-0.414
0.000
0.322
1.182
0.000
-0.768
0.939
0.912
0.2392
0.1857
0.188
2.10
21.93
733
13837
5.031
99.400
4.033
0.114
0.234
RANDOM
1
THROUGHOUT
0.195
0.800
0.800
1.400
BABINET MODEL PLUS MASK
2.10
21.93
106
2015
0
0
1909
0.018
0.022
1951
1.513
1.946
2624
6.770
5.000
238
0.112
0.200
295
0.007
0.020
1418
0.204
0.200
788
0.305
0.200
1341
0.175
0.200
108
0.185
0.200
66
0.156
0.200
18
1.133
1.500
1193
2.033
2.000
1943
3.297
3.000
758
5.296
4.500
681
0.231
0.142
2.1506
51
999
1092
19
0.238
0.153
2.2095
57
970
1027
19
0.248
0.162
2.2735
51
997
1048
19
0.222
0.168
2.3434
48
894
942
19
0.277
0.179
2.4202
52
930
982
19
0.242
0.165
2.5051
45
864
909
19
0.272
0.173
2.5996
48
854
902
19
0.25
0.177
2.7056
33
821
854
19
0.326
0.185
2.8257
43
793
836
19
0.218
0.197
2.9635
40
729
769
19
0.303
0.199
3.1235
25
761
786
19
0.229
0.188
3.5410
33
650
683
19
0.191
0.182
3.8240
39
597
636
19
0.202
0.178
4.1880
33
549
583
19
0.161
0.187
4.6807
28
492
524
19
0.284
0.191
5.4017
22
449
474
19
0.279
0.263
6.6080
23
386
410
19
0.323
0.244
9.3126
26
284
318
19
0.184
0.225
79.0569
14
147
190
19
2.10
30.00
1VJH
14582
0.065
1
99.800
0.100
2.10
2.14
100.000
0.099
2.14
2.18
100.000
0.097
2.18
2.22
100.000
0.099
2.22
2.26
100.000
0.095
2.26
2.31
100.000
0.096
2.31
2.37
100.000
0.083
2.37
2.42
100.000
0.087
2.42
2.49
100.000
0.084
2.49
2.56
100.000
0.081
2.56
2.65
100.000
0.078
2.65
2.74
100.000
0.077
2.74
2.85
100.000
0.075
2.85
2.98
100.000
0.07
2.98
3.14
100.000
0.063
3.14
3.33
100.000
0.058
3.33
3.59
100.000
0.055
3.59
3.95
100.000
0.052
3.95
4.52
99.600
0.056
4.52
5.69
99.400
0.067
5.69
30.00
97.500
refinement
Murshudov, G.N.
ccp4@dl.ac.uk
24/04/2001
Fortran
http://www.ccp4.ac.uk/main.html
REFMAC
program
refmac_5.1.24
phasing
Tom Terwilliger
terwilliger@LANL.gov
29-Jan-2002
http://www.solve.lanl.gov/
SOLVE
program
2.02
phasing
Terwilliger, T. C
terwilliger@LANL.gov
08-Feb-2001
http://www.solve.lanl.gov/
RESOLVE
program
2.02
data reduction
Zbyszek Otwinowski
zbyszek@mix.swmed.edu
http://www.lnls.br/infra/linhasluz/denzo-hkl.htm
DENZO
package
data scaling
Zbyszek Otwinowski
zbyszek@mix.swmed.edu
http://www.lnls.br/infra/linhasluz/denzo-hkl.htm
SCALEPACK
package
data extraction
H.Yang
sw-help@rcsb.rutgers.edu
02/20/2004
C++
http://pdb.rutgers.edu/software/
PDB_EXTRACT
program
1.4
Crystal structure of gene product of At1g24000 from Arabidopsis thaliana
1
N
N
1
N
N
2
N
N
2
N
N
A
PRO
16
A
PRO
16
HELX_P
A
THR
28
A
THR
28
1
1
13
A
GLU
58
A
GLU
58
HELX_P
A
LYS
61
A
LYS
61
5
2
4
A
PRO
99
A
PRO
99
HELX_P
A
PHE
120
A
PHE
120
1
3
22
B
PRO
16
B
PRO
16
HELX_P
B
THR
28
B
THR
28
1
4
13
B
GLU
58
B
GLU
58
HELX_P
B
LYS
61
B
LYS
61
5
5
4
B
PRO
99
B
PRO
99
HELX_P
B
ASN
119
B
ASN
119
1
6
21
covale
1.330
both
A
THR
49
A
C
THR
49
1_555
A
MSE
50
A
N
MSE
50
1_555
covale
1.327
both
A
MSE
50
A
C
MSE
50
1_555
A
THR
51
A
N
THR
51
1_555
covale
1.328
both
A
GLN
53
A
C
GLN
53
1_555
A
MSE
54
A
N
MSE
54
1_555
covale
1.328
both
A
MSE
54
A
C
MSE
54
1_555
A
SER
55
A
N
SER
55
1_555
covale
1.315
both
B
THR
49
B
C
THR
49
1_555
B
MSE
50
B
N
MSE
50
1_555
covale
1.331
both
B
MSE
50
B
C
MSE
50
1_555
B
THR
51
B
N
THR
51
1_555
covale
1.326
both
B
GLN
53
B
C
GLN
53
1_555
B
MSE
54
B
N
MSE
54
1_555
covale
1.332
both
B
MSE
54
B
C
MSE
54
1_555
B
SER
55
B
N
SER
55
1_555
PLANT PROTEIN
Structural genomics, Arabidopsis Thaliana, Center for Eukaryotic Structural Genomics, Protein Structure Initiative, CESG, PLANT PROTEIN
Y1400_ARATH
UNP
1
1
Q9LR93
MTLKGALSVKFDVKCPADKFFSAFVEDTNRPFEKNGKTEIEAVDLVKKTMTIQMSGSEIQKYFKTLKGSIAVTPIGVGDG
SHVVWTFHFEKVHKDIDDPHSIIDESVKYFKKLDEAILNFKE
2
122
1VJH
2
122
Q9LR93
A
1
2
122
2
122
1VJH
2
122
Q9LR93
B
1
2
122
1
expression tag
SER
1
1VJH
A
Q9LR93
UNP
1
2
expression tag
SER
1
1VJH
B
Q9LR93
UNP
1
5
5
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LYS
4
A
LYS
4
A
VAL
13
A
VAL
13
A
SER
81
A
SER
81
A
LYS
91
A
LYS
91
A
PHE
63
A
PHE
63
A
PRO
74
A
PRO
74
A
THR
49
A
THR
49
A
SER
55
A
SER
55
A
LYS
37
A
LYS
37
A
ASP
44
A
ASP
44
B
LYS
4
B
LYS
4
B
VAL
13
B
VAL
13
B
SER
81
B
SER
81
B
LYS
91
B
LYS
91
B
PHE
63
B
PHE
63
B
PRO
74
B
PRO
74
B
THR
49
B
THR
49
B
SER
55
B
SER
55
B
LYS
37
B
LYS
37
B
ASP
44
B
ASP
44
3
monoclinic
P 1 2 1