0.010639 0.000000 0.000000 0.000000 0.010639 0.000000 0.000000 0.000000 0.006236 0.00000 0.00000 0.00000 Joint Center for Structural Genomics (JCSG) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 93.998 93.998 160.365 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Cl -1 35.453 CHLORIDE ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking Ni 2 58.693 NICKEL (II) ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking To be published 0353 Crystal structure of 4-nitrophenylphosphatase (TM1742) from Thermotoga maritima at 2.40 A resolution 10.2210/pdb1vjr/pdb pdb_00001vjr 100 1 CCD 2003-05-22 ADSC Double Crystal Si(111) MAD M x-ray 1 0.9797 1.0 0.9999 1.0 0.9799 1.0 8.2.2 ALS 0.9797, 0.9999, 0.9799 SYNCHROTRON ALS BEAMLINE 8.2.2 30554.322 4-nitrophenylphosphatase 3.1.3.41 1 man polymer 58.693 NICKEL (II) ION 1 syn non-polymer 35.453 CHLORIDE ION 2 syn non-polymer 18.015 water 279 nat water no yes MGSDKIHHHHHHVLDKIELFILD(MSE)DGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRN (MSE)GVDVPDDAVVTSGEITAEH(MSE)LKRFGRCRIFLLGTPQLKKVFEAYGHVIDEENPDFVVLGFDKTLTYERLKK ACILLRKGKFYIATHPDINCPSKEGPVPDAGSI(MSE)AAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKER(MSE)A (MSE)VGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKAVQ MGSDKIHHHHHHVLDKIELFILDMDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDD AVVTSGEITAEHMLKRFGRCRIFLLGTPQLKKVFEAYGHVIDEENPDFVVLGFDKTLTYERLKKACILLRKGKFYIATHP DINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVL TGETTPEDLERAETKPDFVFKNLGELAKAVQ A 283597,356069,356070,356071,356077,356253 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Thermotoga Escherichia sample TM1742 2336 Thermotoga maritima 562 Escherichia coli Plasmid 1 5.35 76.82 VAPOR DIFFUSION,SITTING DROP,NANODROP 6.5 2M sodium chloride, 0.1M MES pH 6.5, 0.1M sodium dihydrogen phosphate, 0.1M potassium dihydrogen phosphate, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 273K 273 Joint Center for Structural Genomics JCSG PSI, Protein Structure Initiative database_2 pdbx_struct_conn_angle struct_conn struct_ref_seq_dif struct_site repository Initial release Version format compliance Advisory Version format compliance Database references Derived calculations 1 0 2004-03-30 1 1 2008-04-26 1 2 2011-07-13 1 3 2023-01-25 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_symmetry _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id SEQUENCE FOR THE VAL/MET CONFLICT AT RESIDUE 1: THIS GENE USES AN ALTERNATE INITIATION CODON THAT RESULTS IN A VALINE AT POSITION 1 WHEN EXPRESSED AS A FUSION. Y RCSB Y RCSB 2004-03-22 REL REL NI NICKEL (II) ION CL CHLORIDE ION HOH water NI 1 2 NI NI 260 A CL 2 3 CL CL 261 A CL 3 3 CL CL 262 A HOH 4 4 HOH HOH 263 A HOH 5 4 HOH HOH 264 A HOH 6 4 HOH HOH 265 A HOH 7 4 HOH HOH 266 A HOH 8 4 HOH HOH 267 A HOH 9 4 HOH HOH 268 A HOH 10 4 HOH HOH 269 A HOH 11 4 HOH HOH 270 A HOH 12 4 HOH HOH 271 A HOH 13 4 HOH HOH 272 A HOH 14 4 HOH HOH 273 A HOH 15 4 HOH HOH 274 A HOH 16 4 HOH HOH 275 A HOH 17 4 HOH HOH 276 A HOH 18 4 HOH HOH 277 A HOH 19 4 HOH HOH 278 A HOH 20 4 HOH HOH 279 A HOH 21 4 HOH HOH 280 A HOH 22 4 HOH HOH 281 A HOH 23 4 HOH HOH 282 A HOH 24 4 HOH HOH 283 A HOH 25 4 HOH HOH 284 A HOH 26 4 HOH HOH 285 A HOH 27 4 HOH HOH 286 A HOH 28 4 HOH HOH 287 A HOH 29 4 HOH HOH 288 A HOH 30 4 HOH HOH 289 A HOH 31 4 HOH HOH 290 A HOH 32 4 HOH HOH 291 A HOH 33 4 HOH HOH 292 A HOH 34 4 HOH HOH 293 A HOH 35 4 HOH HOH 294 A HOH 36 4 HOH HOH 295 A HOH 37 4 HOH HOH 296 A HOH 38 4 HOH HOH 297 A HOH 39 4 HOH HOH 298 A HOH 40 4 HOH HOH 299 A HOH 41 4 HOH HOH 300 A HOH 42 4 HOH HOH 301 A HOH 43 4 HOH HOH 302 A HOH 44 4 HOH HOH 303 A HOH 45 4 HOH HOH 304 A HOH 46 4 HOH HOH 305 A HOH 47 4 HOH HOH 306 A HOH 48 4 HOH HOH 307 A HOH 49 4 HOH HOH 308 A HOH 50 4 HOH HOH 309 A HOH 51 4 HOH HOH 310 A HOH 52 4 HOH HOH 311 A HOH 53 4 HOH HOH 312 A HOH 54 4 HOH HOH 313 A HOH 55 4 HOH HOH 314 A HOH 56 4 HOH HOH 315 A HOH 57 4 HOH HOH 316 A HOH 58 4 HOH HOH 317 A HOH 59 4 HOH HOH 318 A HOH 60 4 HOH HOH 319 A HOH 61 4 HOH HOH 320 A HOH 62 4 HOH HOH 321 A HOH 63 4 HOH HOH 322 A HOH 64 4 HOH HOH 323 A HOH 65 4 HOH HOH 324 A HOH 66 4 HOH HOH 325 A HOH 67 4 HOH HOH 326 A HOH 68 4 HOH HOH 327 A HOH 69 4 HOH HOH 328 A HOH 70 4 HOH HOH 329 A HOH 71 4 HOH HOH 330 A HOH 72 4 HOH HOH 331 A HOH 73 4 HOH HOH 332 A HOH 74 4 HOH HOH 333 A HOH 75 4 HOH HOH 334 A HOH 76 4 HOH HOH 335 A HOH 77 4 HOH HOH 336 A HOH 78 4 HOH HOH 337 A HOH 79 4 HOH HOH 338 A HOH 80 4 HOH HOH 339 A HOH 81 4 HOH HOH 340 A HOH 82 4 HOH HOH 341 A HOH 83 4 HOH HOH 342 A HOH 84 4 HOH HOH 343 A HOH 85 4 HOH HOH 344 A HOH 86 4 HOH HOH 345 A HOH 87 4 HOH HOH 346 A HOH 88 4 HOH HOH 347 A HOH 89 4 HOH HOH 348 A HOH 90 4 HOH HOH 349 A HOH 91 4 HOH HOH 350 A HOH 92 4 HOH HOH 351 A HOH 93 4 HOH HOH 352 A HOH 94 4 HOH HOH 353 A HOH 95 4 HOH HOH 354 A HOH 96 4 HOH HOH 355 A HOH 97 4 HOH HOH 356 A HOH 98 4 HOH HOH 357 A HOH 99 4 HOH HOH 358 A HOH 100 4 HOH HOH 359 A HOH 101 4 HOH HOH 360 A HOH 102 4 HOH HOH 361 A HOH 103 4 HOH HOH 362 A HOH 104 4 HOH HOH 363 A HOH 105 4 HOH HOH 364 A HOH 106 4 HOH HOH 365 A HOH 107 4 HOH HOH 366 A HOH 108 4 HOH HOH 367 A HOH 109 4 HOH HOH 368 A HOH 110 4 HOH HOH 369 A HOH 111 4 HOH HOH 370 A HOH 112 4 HOH HOH 371 A HOH 113 4 HOH HOH 372 A HOH 114 4 HOH HOH 373 A HOH 115 4 HOH HOH 374 A HOH 116 4 HOH HOH 375 A HOH 117 4 HOH HOH 376 A HOH 118 4 HOH HOH 377 A HOH 119 4 HOH HOH 378 A HOH 120 4 HOH HOH 379 A HOH 121 4 HOH HOH 380 A HOH 122 4 HOH HOH 381 A HOH 123 4 HOH HOH 382 A HOH 124 4 HOH HOH 383 A HOH 125 4 HOH HOH 384 A HOH 126 4 HOH HOH 385 A HOH 127 4 HOH HOH 386 A HOH 128 4 HOH HOH 387 A HOH 129 4 HOH HOH 388 A HOH 130 4 HOH HOH 389 A HOH 131 4 HOH HOH 390 A HOH 132 4 HOH HOH 391 A HOH 133 4 HOH HOH 392 A HOH 134 4 HOH HOH 393 A HOH 135 4 HOH HOH 394 A HOH 136 4 HOH HOH 395 A HOH 137 4 HOH HOH 396 A HOH 138 4 HOH HOH 397 A HOH 139 4 HOH HOH 398 A HOH 140 4 HOH HOH 399 A HOH 141 4 HOH HOH 400 A HOH 142 4 HOH HOH 401 A HOH 143 4 HOH HOH 402 A HOH 144 4 HOH HOH 403 A HOH 145 4 HOH HOH 404 A HOH 146 4 HOH HOH 405 A HOH 147 4 HOH HOH 406 A HOH 148 4 HOH HOH 407 A HOH 149 4 HOH HOH 408 A HOH 150 4 HOH HOH 409 A HOH 151 4 HOH HOH 410 A HOH 152 4 HOH HOH 411 A HOH 153 4 HOH HOH 412 A HOH 154 4 HOH HOH 413 A HOH 155 4 HOH HOH 414 A HOH 156 4 HOH HOH 415 A HOH 157 4 HOH HOH 416 A HOH 158 4 HOH HOH 417 A HOH 159 4 HOH HOH 418 A HOH 160 4 HOH HOH 419 A HOH 161 4 HOH HOH 420 A HOH 162 4 HOH HOH 421 A HOH 163 4 HOH HOH 422 A HOH 164 4 HOH HOH 423 A HOH 165 4 HOH HOH 424 A HOH 166 4 HOH HOH 425 A HOH 167 4 HOH HOH 426 A HOH 168 4 HOH HOH 427 A HOH 169 4 HOH HOH 428 A HOH 170 4 HOH HOH 429 A HOH 171 4 HOH HOH 430 A HOH 172 4 HOH HOH 431 A HOH 173 4 HOH HOH 432 A HOH 174 4 HOH HOH 433 A HOH 175 4 HOH HOH 434 A HOH 176 4 HOH HOH 435 A HOH 177 4 HOH HOH 436 A HOH 178 4 HOH HOH 437 A HOH 179 4 HOH HOH 438 A HOH 180 4 HOH HOH 439 A HOH 181 4 HOH HOH 440 A HOH 182 4 HOH HOH 441 A HOH 183 4 HOH HOH 442 A HOH 184 4 HOH HOH 443 A HOH 185 4 HOH HOH 444 A HOH 186 4 HOH HOH 445 A HOH 187 4 HOH HOH 446 A HOH 188 4 HOH HOH 447 A HOH 189 4 HOH HOH 448 A HOH 190 4 HOH HOH 449 A HOH 191 4 HOH HOH 450 A HOH 192 4 HOH HOH 451 A HOH 193 4 HOH HOH 452 A HOH 194 4 HOH HOH 453 A HOH 195 4 HOH HOH 454 A HOH 196 4 HOH HOH 455 A HOH 197 4 HOH HOH 456 A HOH 198 4 HOH HOH 457 A HOH 199 4 HOH HOH 458 A HOH 200 4 HOH HOH 459 A HOH 201 4 HOH HOH 460 A HOH 202 4 HOH HOH 461 A HOH 203 4 HOH HOH 462 A HOH 204 4 HOH HOH 463 A HOH 205 4 HOH HOH 464 A HOH 206 4 HOH HOH 465 A HOH 207 4 HOH HOH 466 A HOH 208 4 HOH HOH 467 A HOH 209 4 HOH HOH 468 A HOH 210 4 HOH HOH 469 A HOH 211 4 HOH HOH 470 A HOH 212 4 HOH HOH 471 A HOH 213 4 HOH HOH 472 A HOH 214 4 HOH HOH 473 A HOH 215 4 HOH HOH 474 A HOH 216 4 HOH HOH 475 A HOH 217 4 HOH HOH 476 A HOH 218 4 HOH HOH 477 A HOH 219 4 HOH HOH 478 A HOH 220 4 HOH HOH 479 A HOH 221 4 HOH HOH 480 A HOH 222 4 HOH HOH 481 A HOH 223 4 HOH HOH 482 A HOH 224 4 HOH HOH 483 A HOH 225 4 HOH HOH 484 A HOH 226 4 HOH HOH 485 A HOH 227 4 HOH HOH 486 A HOH 228 4 HOH HOH 487 A HOH 229 4 HOH HOH 488 A HOH 230 4 HOH HOH 489 A HOH 231 4 HOH HOH 490 A HOH 232 4 HOH HOH 491 A HOH 233 4 HOH HOH 492 A HOH 234 4 HOH HOH 493 A HOH 235 4 HOH HOH 494 A HOH 236 4 HOH HOH 495 A HOH 237 4 HOH HOH 496 A HOH 238 4 HOH HOH 497 A HOH 239 4 HOH HOH 498 A HOH 240 4 HOH HOH 499 A HOH 241 4 HOH HOH 500 A HOH 242 4 HOH HOH 501 A HOH 243 4 HOH HOH 502 A HOH 244 4 HOH HOH 503 A HOH 245 4 HOH HOH 504 A HOH 246 4 HOH HOH 505 A HOH 247 4 HOH HOH 506 A HOH 248 4 HOH HOH 507 A HOH 249 4 HOH HOH 508 A HOH 250 4 HOH HOH 509 A HOH 251 4 HOH HOH 510 A HOH 252 4 HOH HOH 511 A HOH 253 4 HOH HOH 512 A HOH 254 4 HOH HOH 513 A HOH 255 4 HOH HOH 514 A HOH 256 4 HOH HOH 515 A HOH 257 4 HOH HOH 516 A HOH 258 4 HOH HOH 517 A HOH 259 4 HOH HOH 518 A HOH 260 4 HOH HOH 519 A HOH 261 4 HOH HOH 520 A HOH 262 4 HOH HOH 521 A HOH 263 4 HOH HOH 522 A HOH 264 4 HOH HOH 523 A HOH 265 4 HOH HOH 524 A HOH 266 4 HOH HOH 525 A HOH 267 4 HOH HOH 526 A HOH 268 4 HOH HOH 527 A HOH 269 4 HOH HOH 528 A HOH 270 4 HOH HOH 529 A HOH 271 4 HOH HOH 530 A HOH 272 4 HOH HOH 531 A HOH 273 4 HOH HOH 532 A HOH 274 4 HOH HOH 533 A HOH 275 4 HOH HOH 534 A HOH 276 4 HOH HOH 535 A HOH 277 4 HOH HOH 536 A HOH 278 4 HOH HOH 537 A HOH 279 4 HOH HOH 538 A HOH 280 4 HOH HOH 539 A HOH 281 4 HOH HOH 540 A HOH 282 4 HOH HOH 541 A n 1 -11 A n 2 -10 A n 3 -9 A n 4 -8 A n 5 -7 A n 6 -6 A n 7 -5 A n 8 -4 A n 9 -3 A n 10 -2 A HIS -1 n 11 HIS -1 A HIS 0 n 12 HIS 0 A VAL 1 n 13 VAL 1 A LEU 2 n 14 LEU 2 A ASP 3 n 15 ASP 3 A LYS 4 n 16 LYS 4 A ILE 5 n 17 ILE 5 A GLU 6 n 18 GLU 6 A LEU 7 n 19 LEU 7 A PHE 8 n 20 PHE 8 A ILE 9 n 21 ILE 9 A LEU 10 n 22 LEU 10 A ASP 11 n 23 ASP 11 A MSE 12 n 24 MSE 12 A ASP 13 n 25 ASP 13 A GLY 14 n 26 GLY 14 A THR 15 n 27 THR 15 A PHE 16 n 28 PHE 16 A TYR 17 n 29 TYR 17 A LEU 18 n 30 LEU 18 A ASP 19 n 31 ASP 19 A ASP 20 n 32 ASP 20 A SER 21 n 33 SER 21 A LEU 22 n 34 LEU 22 A LEU 23 n 35 LEU 23 A PRO 24 n 36 PRO 24 A GLY 25 n 37 GLY 25 A SER 26 n 38 SER 26 A LEU 27 n 39 LEU 27 A GLU 28 n 40 GLU 28 A PHE 29 n 41 PHE 29 A LEU 30 n 42 LEU 30 A GLU 31 n 43 GLU 31 A THR 32 n 44 THR 32 A LEU 33 n 45 LEU 33 A LYS 34 n 46 LYS 34 A GLU 35 n 47 GLU 35 A LYS 36 n 48 LYS 36 A ASN 37 n 49 ASN 37 A LYS 38 n 50 LYS 38 A ARG 39 n 51 ARG 39 A PHE 40 n 52 PHE 40 A VAL 41 n 53 VAL 41 A PHE 42 n 54 PHE 42 A PHE 43 n 55 PHE 43 A THR 44 n 56 THR 44 A ASN 45 n 57 ASN 45 A ASN 46 n 58 ASN 46 A SER 47 n 59 SER 47 A SER 48 n 60 SER 48 A LEU 49 n 61 LEU 49 A GLY 50 n 62 GLY 50 A ALA 51 n 63 ALA 51 A GLN 52 n 64 GLN 52 A ASP 53 n 65 ASP 53 A TYR 54 n 66 TYR 54 A VAL 55 n 67 VAL 55 A ARG 56 n 68 ARG 56 A LYS 57 n 69 LYS 57 A LEU 58 n 70 LEU 58 A ARG 59 n 71 ARG 59 A ASN 60 n 72 ASN 60 A MSE 61 n 73 MSE 61 A GLY 62 n 74 GLY 62 A VAL 63 n 75 VAL 63 A ASP 64 n 76 ASP 64 A VAL 65 n 77 VAL 65 A PRO 66 n 78 PRO 66 A ASP 67 n 79 ASP 67 A ASP 68 n 80 ASP 68 A ALA 69 n 81 ALA 69 A VAL 70 n 82 VAL 70 A VAL 71 n 83 VAL 71 A THR 72 n 84 THR 72 A SER 73 n 85 SER 73 A GLY 74 n 86 GLY 74 A GLU 75 n 87 GLU 75 A ILE 76 n 88 ILE 76 A THR 77 n 89 THR 77 A ALA 78 n 90 ALA 78 A GLU 79 n 91 GLU 79 A HIS 80 n 92 HIS 80 A MSE 81 n 93 MSE 81 A LEU 82 n 94 LEU 82 A LYS 83 n 95 LYS 83 A ARG 84 n 96 ARG 84 A PHE 85 n 97 PHE 85 A GLY 86 n 98 GLY 86 A ARG 87 n 99 ARG 87 A CYS 88 n 100 CYS 88 A ARG 89 n 101 ARG 89 A ILE 90 n 102 ILE 90 A PHE 91 n 103 PHE 91 A LEU 92 n 104 LEU 92 A LEU 93 n 105 LEU 93 A GLY 94 n 106 GLY 94 A THR 95 n 107 THR 95 A PRO 96 n 108 PRO 96 A GLN 97 n 109 GLN 97 A LEU 98 n 110 LEU 98 A LYS 99 n 111 LYS 99 A LYS 100 n 112 LYS 100 A VAL 101 n 113 VAL 101 A PHE 102 n 114 PHE 102 A GLU 103 n 115 GLU 103 A ALA 104 n 116 ALA 104 A TYR 105 n 117 TYR 105 A GLY 106 n 118 GLY 106 A HIS 107 n 119 HIS 107 A VAL 108 n 120 VAL 108 A ILE 109 n 121 ILE 109 A ASP 110 n 122 ASP 110 A GLU 111 n 123 GLU 111 A GLU 112 n 124 GLU 112 A ASN 113 n 125 ASN 113 A PRO 114 n 126 PRO 114 A ASP 115 n 127 ASP 115 A PHE 116 n 128 PHE 116 A VAL 117 n 129 VAL 117 A VAL 118 n 130 VAL 118 A LEU 119 n 131 LEU 119 A GLY 120 n 132 GLY 120 A PHE 121 n 133 PHE 121 A ASP 122 n 134 ASP 122 A LYS 123 n 135 LYS 123 A THR 124 n 136 THR 124 A LEU 125 n 137 LEU 125 A THR 126 n 138 THR 126 A TYR 127 n 139 TYR 127 A GLU 128 n 140 GLU 128 A ARG 129 n 141 ARG 129 A LEU 130 n 142 LEU 130 A LYS 131 n 143 LYS 131 A LYS 132 n 144 LYS 132 A ALA 133 n 145 ALA 133 A CYS 134 n 146 CYS 134 A ILE 135 n 147 ILE 135 A LEU 136 n 148 LEU 136 A LEU 137 n 149 LEU 137 A ARG 138 n 150 ARG 138 A LYS 139 n 151 LYS 139 A GLY 140 n 152 GLY 140 A LYS 141 n 153 LYS 141 A PHE 142 n 154 PHE 142 A TYR 143 n 155 TYR 143 A ILE 144 n 156 ILE 144 A ALA 145 n 157 ALA 145 A THR 146 n 158 THR 146 A HIS 147 n 159 HIS 147 A PRO 148 n 160 PRO 148 A ASP 149 n 161 ASP 149 A ILE 150 n 162 ILE 150 A ASN 151 n 163 ASN 151 A CYS 152 n 164 CYS 152 A PRO 153 n 165 PRO 153 A SER 154 n 166 SER 154 A LYS 155 n 167 LYS 155 A GLU 156 n 168 GLU 156 A GLY 157 n 169 GLY 157 A PRO 158 n 170 PRO 158 A VAL 159 n 171 VAL 159 A PRO 160 n 172 PRO 160 A ASP 161 n 173 ASP 161 A ALA 162 n 174 ALA 162 A GLY 163 n 175 GLY 163 A SER 164 n 176 SER 164 A ILE 165 n 177 ILE 165 A MSE 166 n 178 MSE 166 A ALA 167 n 179 ALA 167 A ALA 168 n 180 ALA 168 A ILE 169 n 181 ILE 169 A GLU 170 n 182 GLU 170 A ALA 171 n 183 ALA 171 A SER 172 n 184 SER 172 A THR 173 n 185 THR 173 A GLY 174 n 186 GLY 174 A ARG 175 n 187 ARG 175 A LYS 176 n 188 LYS 176 A PRO 177 n 189 PRO 177 A ASP 178 n 190 ASP 178 A LEU 179 n 191 LEU 179 A ILE 180 n 192 ILE 180 A ALA 181 n 193 ALA 181 A GLY 182 n 194 GLY 182 A LYS 183 n 195 LYS 183 A PRO 184 n 196 PRO 184 A ASN 185 n 197 ASN 185 A PRO 186 n 198 PRO 186 A LEU 187 n 199 LEU 187 A VAL 188 n 200 VAL 188 A VAL 189 n 201 VAL 189 A ASP 190 n 202 ASP 190 A VAL 191 n 203 VAL 191 A ILE 192 n 204 ILE 192 A SER 193 n 205 SER 193 A GLU 194 n 206 GLU 194 A LYS 195 n 207 LYS 195 A PHE 196 n 208 PHE 196 A GLY 197 n 209 GLY 197 A VAL 198 n 210 VAL 198 A PRO 199 n 211 PRO 199 A LYS 200 n 212 LYS 200 A GLU 201 n 213 GLU 201 A ARG 202 n 214 ARG 202 A MSE 203 n 215 MSE 203 A ALA 204 n 216 ALA 204 A MSE 205 n 217 MSE 205 A VAL 206 n 218 VAL 206 A GLY 207 n 219 GLY 207 A ASP 208 n 220 ASP 208 A ARG 209 n 221 ARG 209 A LEU 210 n 222 LEU 210 A TYR 211 n 223 TYR 211 A THR 212 n 224 THR 212 A ASP 213 n 225 ASP 213 A VAL 214 n 226 VAL 214 A LYS 215 n 227 LYS 215 A LEU 216 n 228 LEU 216 A GLY 217 n 229 GLY 217 A LYS 218 n 230 LYS 218 A ASN 219 n 231 ASN 219 A ALA 220 n 232 ALA 220 A GLY 221 n 233 GLY 221 A ILE 222 n 234 ILE 222 A VAL 223 n 235 VAL 223 A SER 224 n 236 SER 224 A ILE 225 n 237 ILE 225 A LEU 226 n 238 LEU 226 A VAL 227 n 239 VAL 227 A LEU 228 n 240 LEU 228 A THR 229 n 241 THR 229 A GLY 230 n 242 GLY 230 A GLU 231 n 243 GLU 231 A THR 232 n 244 THR 232 A THR 233 n 245 THR 233 A PRO 234 n 246 PRO 234 A GLU 235 n 247 GLU 235 A ASP 236 n 248 ASP 236 A LEU 237 n 249 LEU 237 A GLU 238 n 250 GLU 238 A ARG 239 n 251 ARG 239 A ALA 240 n 252 ALA 240 A GLU 241 n 253 GLU 241 A THR 242 n 254 THR 242 A LYS 243 n 255 LYS 243 A PRO 244 n 256 PRO 244 A ASP 245 n 257 ASP 245 A PHE 246 n 258 PHE 246 A VAL 247 n 259 VAL 247 A PHE 248 n 260 PHE 248 A LYS 249 n 261 LYS 249 A ASN 250 n 262 ASN 250 A LEU 251 n 263 LEU 251 A GLY 252 n 264 GLY 252 A GLU 253 n 265 GLU 253 A LEU 254 n 266 LEU 254 A ALA 255 n 267 ALA 255 A LYS 256 n 268 LYS 256 A ALA 257 n 269 ALA 257 A VAL 258 n 270 VAL 258 A GLN 259 n 271 GLN 259 A 2.2399 0.5936 -0.8810 2.5158 -1.4812 3.3699 0.0751 -0.1930 -0.1300 0.0875 -0.0710 -0.1962 -0.0217 0.4375 -0.0042 -0.0568 -0.0392 0.0073 0.0101 0.0083 -0.0686 refined 89.9930 59.6460 21.6200 X-RAY DIFFRACTION 2.1910 -0.9504 -0.3542 2.1412 -0.0535 1.3653 0.0223 0.0442 -0.0351 -0.1267 -0.0632 -0.1115 0.1106 0.0874 0.0410 -0.0133 -0.0675 0.0689 -0.0301 -0.0355 -0.0738 refined 88.2530 69.9990 -1.5860 X-RAY DIFFRACTION A -1 A 11 A 72 A 84 X-RAY DIFFRACTION 1 ALL A 183 A 195 A 259 A 271 X-RAY DIFFRACTION 1 ALL A 73 A 85 A 182 A 194 X-RAY DIFFRACTION 2 ALL author_defined_assembly 1 monomeric A HIS 0 A NE2 HIS 12 1_555 A NI 260 B NI NI 1_555 A HIS 80 A NE2 HIS 92 3_645 99.5 A HIS 0 A NE2 HIS 12 1_555 A NI 260 B NI NI 1_555 A CL 261 C CL CL 1_555 113.6 A HIS 80 A NE2 HIS 92 3_645 A NI 260 B NI NI 1_555 A CL 261 C CL CL 1_555 120.3 A HIS 0 A NE2 HIS 12 1_555 A NI 260 B NI NI 1_555 A CL 262 D CL CL 1_555 106.1 A HIS 80 A NE2 HIS 92 3_645 A NI 260 B NI NI 1_555 A CL 262 D CL CL 1_555 101.7 A CL 261 C CL CL 1_555 A NI 260 B NI NI 1_555 A CL 262 D CL CL 1_555 113.7 A MSE 12 SELENOMETHIONINE A MSE 24 MET A MSE 61 SELENOMETHIONINE A MSE 73 MET A MSE 81 SELENOMETHIONINE A MSE 93 MET A MSE 166 SELENOMETHIONINE A MSE 178 MET A MSE 203 SELENOMETHIONINE A MSE 215 MET A MSE 205 SELENOMETHIONINE A MSE 217 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O VAL 71 A O VAL 83 A N PHE 42 A N PHE 54 A O VAL 41 A O VAL 53 A N LEU 10 A N LEU 22 A N ILE 9 A N ILE 21 A O VAL 206 A O VAL 218 A N MSE 205 A N MSE 217 A O ILE 225 A O ILE 237 A N LEU 226 A N LEU 238 A O PHE 246 A O PHE 258 A N LEU 18 A N LEU 30 A O SER 21 A O SER 33 A O VAL 108 A O VAL 120 A N ILE 90 A N ILE 102 A N PHE 91 A N PHE 103 A O VAL 118 A O VAL 130 A N LEU 119 A N LEU 131 A O ILE 144 A O ILE 156 A N ALA 145 A N ALA 157 A O LEU 179 A O LEU 191 A N CYS 152 A N CYS 164 A O VAL 159 A O VAL 171 1 A N HIS -1 A N HIS 11 1 Y 1 A CB HIS -1 A CB HIS 11 1 Y 1 A CG HIS -1 A CG HIS 11 1 Y 1 A ND1 HIS -1 A ND1 HIS 11 1 Y 1 A CD2 HIS -1 A CD2 HIS 11 1 Y 1 A CE1 HIS -1 A CE1 HIS 11 1 Y 1 A NE2 HIS -1 A NE2 HIS 11 1 Y 1 A CE LYS 4 A CE LYS 16 1 Y 1 A NZ LYS 4 A NZ LYS 16 1 Y 1 A CE LYS 155 A CE LYS 167 1 Y 1 A NZ LYS 155 A NZ LYS 167 1 Y 1 A CD GLU 194 A CD GLU 206 1 Y 1 A OE1 GLU 194 A OE1 GLU 206 1 Y 1 A OE2 GLU 194 A OE2 GLU 206 1 Y 1 A MET -11 A MET 1 1 Y 1 A GLY -10 A GLY 2 1 Y 1 A SER -9 A SER 3 1 Y 1 A ASP -8 A ASP 4 1 Y 1 A LYS -7 A LYS 5 1 Y 1 A ILE -6 A ILE 6 1 Y 1 A HIS -5 A HIS 7 1 Y 1 A HIS -4 A HIS 8 1 Y 1 A HIS -3 A HIS 9 1 Y 1 A HIS -2 A HIS 10 1 Y 1 A A OD2 O ASP HOH 20 520 2.18 B 1 6.13 0.90 118.30 124.43 A A A CB CG OD2 ASP ASP ASP 20 20 20 C C C N 1 6.46 0.90 118.30 124.76 A A A CB CG OD2 ASP ASP ASP 53 53 53 N 1 5.48 0.90 118.30 123.78 A A A CB CG OD2 ASP ASP ASP 178 178 178 N 1 A MSE 12 -102.14 -90.20 1 A THR 15 -120.36 -56.45 1 A ASP 19 73.11 -104.12 1 A ASP 161 -126.42 -164.41 44.646 1.56 0.00 0.00 1.56 0.00 -3.12 0.963 0.956 0.19427 0.16381 0.1653 2.40 51.17 1485 27354 5.1 99.92 7.955 0.101 RANDOM LIKELY RESIDUAL 1 THROUGHOUT MAD 0.146 0.140 0.80 0.80 1.20 BABINET MODEL WITH MASK 2.40 51.17 279 2312 3 0 2030 0.016 0.022 2130 1.427 1.979 2889 5.828 5.000 275 36.945 24.479 96 14.025 15.000 393 13.771 15.000 14 0.093 0.200 328 0.005 0.020 1607 0.198 0.200 989 0.134 0.200 167 0.145 0.200 32 0.087 0.200 11 2.080 3.000 1357 3.092 5.000 2149 6.486 8.000 848 8.850 11.000 732 0.327 0.274 2.462 120 1955 20 5.78 57.98 2.400 94.00 1VJR 28916 0.072 1 14.5 4.6 100.0 2.40 2.46 2.3 2087 0.537 1 4.8 100.0 data reduction MOSFLM data scaling SCALA 4.2) phasing SOLVE phasing autoSHARP refinement REFMAC 5.2.0000 data scaling CCP4 (SCALA) Crystal structure of 4-nitrophenylphosphatase (TM1742) from Thermotoga maritima at 2.40 A resolution 1 N N 2 N N 3 N N 3 N N 4 N N A HIS 0 A HIS 12 HELX_P A ILE 5 A ILE 17 5 1 6 A GLY 25 A GLY 37 HELX_P A LYS 36 A LYS 48 1 2 12 A GLY 50 A GLY 62 HELX_P A MSE 61 A MSE 73 1 3 12 A PRO 66 A PRO 78 HELX_P A ASP 68 A ASP 80 5 4 3 A SER 73 A SER 85 HELX_P A GLY 86 A GLY 98 1 5 14 A THR 95 A THR 107 HELX_P A TYR 105 A TYR 117 1 6 11 A THR 126 A THR 138 HELX_P A ARG 138 A ARG 150 1 7 13 A ASP 161 A ASP 173 HELX_P A GLY 174 A GLY 186 1 8 14 A PRO 186 A PRO 198 HELX_P A GLY 197 A GLY 209 1 9 12 A PRO 199 A PRO 211 HELX_P A GLU 201 A GLU 213 5 10 3 A ARG 209 A ARG 221 HELX_P A GLY 221 A GLY 233 1 11 13 A THR 233 A THR 245 HELX_P A ALA 240 A ALA 252 1 12 8 A ASN 250 A ASN 262 HELX_P A GLN 259 A GLN 271 1 13 10 covale 1.325 both A ASP 11 A C ASP 23 1_555 A MSE 12 A N MSE 24 1_555 covale 1.329 both A MSE 12 A C MSE 24 1_555 A ASP 13 A N ASP 25 1_555 covale 1.330 both A ASN 60 A C ASN 72 1_555 A MSE 61 A N MSE 73 1_555 covale 1.332 both A MSE 61 A C MSE 73 1_555 A GLY 62 A N GLY 74 1_555 covale 1.331 both A HIS 80 A C HIS 92 1_555 A MSE 81 A N MSE 93 1_555 covale 1.338 both A MSE 81 A C MSE 93 1_555 A LEU 82 A N LEU 94 1_555 covale 1.336 both A ILE 165 A C ILE 177 1_555 A MSE 166 A N MSE 178 1_555 covale 1.333 both A MSE 166 A C MSE 178 1_555 A ALA 167 A N ALA 179 1_555 covale 1.336 both A ARG 202 A C ARG 214 1_555 A MSE 203 A N MSE 215 1_555 covale 1.326 both A MSE 203 A C MSE 215 1_555 A ALA 204 A N ALA 216 1_555 covale 1.327 both A ALA 204 A C ALA 216 1_555 A MSE 205 A N MSE 217 1_555 covale 1.322 both A MSE 205 A C MSE 217 1_555 A VAL 206 A N VAL 218 1_555 metalc 2.165 A HIS 0 A NE2 HIS 12 1_555 A NI 260 B NI NI 1_555 metalc 2.135 A HIS 80 A NE2 HIS 92 3_645 A NI 260 B NI NI 1_555 metalc 2.188 A NI 260 B NI NI 1_555 A CL 261 C CL CL 1_555 metalc 2.600 A NI 260 B NI NI 1_555 A CL 262 D CL CL 1_555 HYDROLASE TM1742, 4-nitrophenylphosphatase, STRUCTURAL GENOMICS, JCSG, PSI, Protein Structure Initiative, Joint Center for Structural Genomics, HYDROLASE A LYS 183 A LYS 195 1 A PRO 184 A PRO 196 3.57 Q9X264_THEMA UNP 1 1 Q9X264 MLDKIELFILDMDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDVPDDAVVTSGEITAEH MLKRFGRCRIFLLGTPQLKKVFEAYGHVIDEENPDFVVLGFDKTLTYERLKKACILLRKGKFYIATHPDINCPSKEGPVP DAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERA ETKPDFVFKNLGELAKAVQ 1 259 1VJR 1 259 Q9X264 A 1 13 271 1 expression tag MET -11 1VJR A Q9X264 UNP 1 1 expression tag GLY -10 1VJR A Q9X264 UNP 2 1 expression tag SER -9 1VJR A Q9X264 UNP 3 1 expression tag ASP -8 1VJR A Q9X264 UNP 4 1 expression tag LYS -7 1VJR A Q9X264 UNP 5 1 expression tag ILE -6 1VJR A Q9X264 UNP 6 1 expression tag HIS -5 1VJR A Q9X264 UNP 7 1 expression tag HIS -4 1VJR A Q9X264 UNP 8 1 expression tag HIS -3 1VJR A Q9X264 UNP 9 1 expression tag HIS -2 1VJR A Q9X264 UNP 10 1 expression tag HIS -1 1VJR A Q9X264 UNP 11 1 expression tag HIS 0 1VJR A Q9X264 UNP 12 1 MET SEE REMARK 999 VAL 1 1VJR A Q9X264 UNP 1 13 1 MET modified residue MSE 12 1VJR A Q9X264 UNP 12 24 1 MET modified residue MSE 61 1VJR A Q9X264 UNP 61 73 1 MET modified residue MSE 81 1VJR A Q9X264 UNP 81 93 1 MET modified residue MSE 166 1VJR A Q9X264 UNP 166 178 1 MET modified residue MSE 203 1VJR A Q9X264 UNP 203 215 1 MET modified residue MSE 205 1VJR A Q9X264 UNP 205 217 6 2 5 2 parallel parallel parallel parallel parallel anti-parallel parallel parallel parallel parallel anti-parallel A VAL 70 A VAL 82 A THR 72 A THR 84 A ARG 39 A ARG 51 A THR 44 A THR 56 A LEU 7 A LEU 19 A LEU 10 A LEU 22 A MSE 203 A MSE 215 A GLY 207 A GLY 219 A VAL 223 A VAL 235 A VAL 227 A VAL 239 A PHE 246 A PHE 258 A PHE 248 A PHE 260 A TYR 17 A TYR 29 A LEU 18 A LEU 30 A SER 21 A SER 33 A LEU 22 A LEU 34 A VAL 108 A VAL 120 A ILE 109 A ILE 121 A ARG 89 A ARG 101 A LEU 93 A LEU 105 A PHE 116 A PHE 128 A LEU 119 A LEU 131 A PHE 142 A PHE 154 A ALA 145 A ALA 157 A LEU 179 A LEU 191 A ILE 180 A ILE 192 A ASN 151 A ASN 163 A CYS 152 A CYS 164 A VAL 159 A VAL 171 A PRO 160 A PRO 172 BINDING SITE FOR RESIDUE NI A 260 A NI 260 Software 4 BINDING SITE FOR RESIDUE CL A 261 A CL 261 Software 2 BINDING SITE FOR RESIDUE CL A 262 A CL 262 Software 2 A HIS 0 A HIS 12 4 1_555 A HIS 80 A HIS 92 4 3_645 A CL 261 C CL 4 1_555 A CL 262 D CL 4 1_555 A HIS 0 A HIS 12 2 1_555 A NI 260 B NI 2 1_555 A HIS 80 A HIS 92 2 3_645 A NI 260 B NI 2 1_555 92 P 41 21 2