0.012102
0.000000
0.000000
0.000000
0.010786
0.000000
0.000000
0.000000
0.010126
0.00000
0.00000
0.00000
Somoza, J.R.
Skene, R.J.
Katz, B.A.
Mol, C.
Ho, J.D.
Jennings, A.J.
Luong, C.
Arvai, A.
Buggy, J.J.
Chi, E.
Tang, J.
Sang, B.-C.
Verner, E.
Wynands, R.
Leahy, E.M.
Dougan, D.R.
Snell, G.
Navre, M.
Knuth, M.W.
Swanson, R.V.
McRee, D.E.
Tari, L.W.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
82.63
92.71
98.76
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C24 H23 N3 O4
417.457
5-(4-METHYL-BENZOYLAMINO)-BIPHENYL-3,4'-DICARBOXYLIC ACID 3-DIMETHYLAMIDE-4'-HYDROXYAMIDE
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Na 1
22.990
SODIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
N
O
N
76
N
O
N
77
N
C
Y
78
N
C
Y
79
N
C
Y
80
N
C
Y
81
N
C
Y
82
N
C
Y
83
N
C
Y
84
N
C
Y
85
N
C
Y
86
N
C
Y
87
N
C
Y
88
N
C
Y
89
N
C
N
90
N
C
N
91
N
O
N
92
N
N
N
93
N
C
N
94
N
C
N
95
N
N
N
96
N
C
N
97
N
O
Y
98
N
C
Y
99
N
C
Y
100
N
C
Y
101
N
C
Y
102
N
C
Y
103
N
C
N
104
N
C
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
N
N
129
R
C
N
130
N
C
N
131
N
O
N
132
N
C
N
133
N
S
N
134
N
O
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
N
N
143
S
C
N
144
N
C
N
145
N
O
N
146
N
C
N
147
N
C
N
148
N
C
N
149
N
O
N
150
N
N
N
151
N
O
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
N
N
163
S
C
N
164
N
C
N
165
N
O
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
O
N
171
N
O
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
N
N
182
N
C
N
183
N
C
N
184
N
O
N
185
N
O
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
N
N
192
S
C
N
193
N
C
N
194
N
O
N
195
N
C
Y
196
N
C
Y
197
N
N
Y
198
N
C
Y
199
N
C
Y
200
N
N
N
201
N
O
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
O
N
213
N
H
N
214
N
H
N
215
N
N
N
216
S
C
N
217
N
C
N
218
N
O
N
219
S
C
N
220
N
C
N
221
N
C
N
222
N
C
N
223
N
O
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
N
N
238
S
C
N
239
N
C
N
240
N
O
N
241
N
C
N
242
N
C
N
243
N
C
N
244
N
C
N
245
N
O
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
N
N
260
S
C
N
261
N
C
N
262
N
O
N
263
N
C
N
264
N
C
N
265
N
C
N
266
N
C
N
267
N
N
N
268
N
O
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
N
N
285
S
C
N
286
N
C
N
287
N
O
N
288
N
C
N
289
N
C
N
290
N
S
N
291
N
C
N
292
N
O
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
NA
N
305
N
N
N
306
S
C
N
307
N
C
N
308
N
O
N
309
N
C
Y
310
N
C
Y
311
N
C
Y
312
N
C
Y
313
N
C
Y
314
N
C
Y
315
N
C
N
316
N
O
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
N
N
329
S
C
N
330
N
C
N
331
N
O
N
332
N
C
N
333
N
C
N
334
N
C
N
335
N
O
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
N
N
346
S
C
N
347
N
C
N
348
N
O
N
349
N
C
N
350
N
O
N
351
N
O
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
N
N
360
S
C
N
361
N
C
N
362
N
O
N
363
R
C
N
364
N
O
N
365
N
C
N
366
N
O
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
N
N
377
S
C
N
378
N
C
N
379
N
O
N
380
N
C
Y
381
N
C
Y
382
N
C
Y
383
N
C
Y
384
N
N
Y
385
N
C
Y
386
N
C
Y
387
N
C
Y
388
N
C
Y
389
N
C
N
390
N
O
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
N
N
404
S
C
N
405
N
C
N
406
N
O
N
407
N
C
Y
408
N
C
Y
409
N
C
Y
410
N
C
Y
411
N
C
Y
412
N
C
Y
413
N
C
N
414
N
O
N
415
N
O
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
N
N
428
S
C
N
429
N
C
N
430
N
O
N
431
N
C
N
432
N
C
N
433
N
C
N
434
N
O
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
ZN
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
doub
N
75
N
sing
Y
76
N
doub
Y
77
N
sing
N
78
N
sing
Y
79
N
sing
Y
80
N
doub
N
81
N
sing
Y
82
N
sing
N
83
N
sing
Y
84
N
doub
Y
85
N
sing
N
86
N
sing
Y
87
N
doub
Y
88
N
sing
Y
89
N
sing
N
90
N
sing
Y
91
N
doub
N
92
N
sing
Y
93
N
sing
N
94
N
sing
Y
95
N
doub
N
96
N
sing
N
97
N
sing
N
98
N
doub
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
Y
112
N
doub
Y
113
N
sing
N
114
N
sing
Y
115
N
sing
N
116
N
sing
Y
117
N
doub
N
118
N
sing
Y
119
N
sing
N
120
N
sing
Y
121
N
doub
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
doub
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
doub
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
doub
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
doub
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
doub
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
doub
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
Y
196
N
sing
Y
197
N
doub
Y
198
N
doub
N
199
N
sing
Y
200
N
sing
N
201
N
sing
Y
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
doub
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
doub
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
doub
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
doub
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
doub
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
Y
304
N
doub
Y
305
N
sing
Y
306
N
sing
N
307
N
sing
Y
308
N
doub
N
309
N
sing
Y
310
N
doub
N
311
N
sing
Y
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
doub
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
doub
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
doub
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
doub
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
Y
373
N
doub
Y
374
N
sing
Y
375
N
sing
N
376
N
sing
Y
377
N
doub
Y
378
N
sing
Y
379
N
sing
N
380
N
sing
Y
381
N
sing
Y
382
N
doub
N
383
N
sing
Y
384
N
doub
N
385
N
sing
Y
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
doub
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
Y
401
N
doub
Y
402
N
sing
Y
403
N
sing
N
404
N
sing
Y
405
N
doub
N
406
N
sing
Y
407
N
doub
N
408
N
sing
Y
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
doub
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
UK
Structure
STRUE6
2005
0969-2126
12
1325
1334
10.1016/j.str.2004.04.012
15242608
Structural Snapshots of Human HDAC8 Provide Insights into the Class I Histone Deacetylases
2004
10.2210/pdb1vkg/pdb
pdb_00001vkg
100
1
osmic
IMAGE PLATE
2002-12-05
RIGAKU RAXIS IV++
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RUH3R
41802.477
Histone deacetylase 8
2
man
polymer
65.409
ZINC ION
2
syn
non-polymer
22.990
SODIUM ION
2
syn
non-polymer
417.457
5-(4-METHYL-BENZOYLAMINO)-BIPHENYL-3,4'-DICARBOXYLIC ACID 3-DIMETHYLAMIDE-4'-HYDROXYAMIDE
2
syn
non-polymer
18.015
water
244
nat
water
HDAC8
no
no
MEEPEEPADSGQSLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQ
KVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVL
GILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKY
YQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTG
VILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVV
MEEPEEPADSGQSLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQ
KVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVL
GILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKY
YQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTG
VILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVV
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
fall armyworm
Spodoptera
sample
HDAC8, HDACL1
9606
Homo sapiens
7108
Spodoptera frugiperda
Sf9
pSXB2
baculovirus
pFastbacHTa
1
2.26
45.61
VAPOR DIFFUSION, SITTING DROP
PEG 3350, 0.2M KCl, pH 6.8-7.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K
277
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Refinement description
1
0
2004-07-27
1
1
2008-04-26
1
2
2011-07-13
1
3
2023-08-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Crystal Structure of Human HDAC8 complexed with trichostatin A
Crystal Structure of Human HDAC8 complexed with MS-344
Crystal Structure of HDAC8 complexed with SAHA
RCSB
Y
RCSB
2004-05-13
REL
REL
ZN
ZINC ION
NA
SODIUM ION
CRI
5-(4-METHYL-BENZOYLAMINO)-BIPHENYL-3,4'-DICARBOXYLIC ACID 3-DIMETHYLAMIDE-4'-HYDROXYAMIDE
HOH
water
1T64
PDB ENTRY 1T64
PDB
experimental model
ZN
400
2
ZN
ZN
400
A
NA
12
3
NA
NA
401
A
INH
401
4
CRI
CRI
402
A
ZN
400
2
ZN
ZN
400
B
NA
2
3
NA
NA
401
B
INH
401
4
CRI
CRI
402
B
HOH
6
5
HOH
HOH
403
A
HOH
7
5
HOH
HOH
404
A
HOH
9
5
HOH
HOH
405
A
HOH
10
5
HOH
HOH
406
A
HOH
11
5
HOH
HOH
407
A
HOH
13
5
HOH
HOH
408
A
HOH
16
5
HOH
HOH
409
A
HOH
17
5
HOH
HOH
410
A
HOH
18
5
HOH
HOH
411
A
HOH
19
5
HOH
HOH
412
A
HOH
20
5
HOH
HOH
413
A
HOH
21
5
HOH
HOH
414
A
HOH
24
5
HOH
HOH
415
A
HOH
26
5
HOH
HOH
416
A
HOH
28
5
HOH
HOH
417
A
HOH
32
5
HOH
HOH
418
A
HOH
33
5
HOH
HOH
419
A
HOH
37
5
HOH
HOH
420
A
HOH
43
5
HOH
HOH
421
A
HOH
51
5
HOH
HOH
422
A
HOH
59
5
HOH
HOH
423
A
HOH
60
5
HOH
HOH
424
A
HOH
69
5
HOH
HOH
425
A
HOH
70
5
HOH
HOH
426
A
HOH
72
5
HOH
HOH
427
A
HOH
75
5
HOH
HOH
428
A
HOH
87
5
HOH
HOH
429
A
HOH
88
5
HOH
HOH
430
A
HOH
89
5
HOH
HOH
431
A
HOH
91
5
HOH
HOH
432
A
HOH
92
5
HOH
HOH
433
A
HOH
93
5
HOH
HOH
434
A
HOH
94
5
HOH
HOH
435
A
HOH
95
5
HOH
HOH
436
A
HOH
97
5
HOH
HOH
437
A
HOH
98
5
HOH
HOH
438
A
HOH
100
5
HOH
HOH
439
A
HOH
101
5
HOH
HOH
440
A
HOH
108
5
HOH
HOH
441
A
HOH
110
5
HOH
HOH
442
A
HOH
115
5
HOH
HOH
443
A
HOH
118
5
HOH
HOH
444
A
HOH
120
5
HOH
HOH
445
A
HOH
125
5
HOH
HOH
446
A
HOH
133
5
HOH
HOH
447
A
HOH
134
5
HOH
HOH
448
A
HOH
137
5
HOH
HOH
449
A
HOH
142
5
HOH
HOH
450
A
HOH
147
5
HOH
HOH
451
A
HOH
154
5
HOH
HOH
452
A
HOH
158
5
HOH
HOH
453
A
HOH
161
5
HOH
HOH
454
A
HOH
169
5
HOH
HOH
455
A
HOH
172
5
HOH
HOH
456
A
HOH
178
5
HOH
HOH
457
A
HOH
184
5
HOH
HOH
458
A
HOH
192
5
HOH
HOH
459
A
HOH
194
5
HOH
HOH
460
A
HOH
195
5
HOH
HOH
461
A
HOH
199
5
HOH
HOH
462
A
HOH
200
5
HOH
HOH
463
A
HOH
201
5
HOH
HOH
464
A
HOH
209
5
HOH
HOH
465
A
HOH
217
5
HOH
HOH
466
A
HOH
219
5
HOH
HOH
467
A
HOH
223
5
HOH
HOH
468
A
HOH
224
5
HOH
HOH
469
A
HOH
230
5
HOH
HOH
470
A
HOH
231
5
HOH
HOH
471
A
HOH
233
5
HOH
HOH
472
A
HOH
237
5
HOH
HOH
473
A
HOH
238
5
HOH
HOH
474
A
HOH
242
5
HOH
HOH
475
A
HOH
247
5
HOH
HOH
476
A
HOH
260
5
HOH
HOH
477
A
HOH
263
5
HOH
HOH
478
A
HOH
267
5
HOH
HOH
479
A
HOH
268
5
HOH
HOH
480
A
HOH
275
5
HOH
HOH
481
A
HOH
282
5
HOH
HOH
482
A
HOH
284
5
HOH
HOH
483
A
HOH
288
5
HOH
HOH
484
A
HOH
292
5
HOH
HOH
485
A
HOH
293
5
HOH
HOH
486
A
HOH
294
5
HOH
HOH
487
A
HOH
295
5
HOH
HOH
488
A
HOH
305
5
HOH
HOH
489
A
HOH
307
5
HOH
HOH
490
A
HOH
312
5
HOH
HOH
491
A
HOH
314
5
HOH
HOH
492
A
HOH
318
5
HOH
HOH
493
A
HOH
323
5
HOH
HOH
494
A
HOH
325
5
HOH
HOH
495
A
HOH
326
5
HOH
HOH
496
A
HOH
329
5
HOH
HOH
497
A
HOH
331
5
HOH
HOH
498
A
HOH
336
5
HOH
HOH
499
A
HOH
337
5
HOH
HOH
500
A
HOH
341
5
HOH
HOH
501
A
HOH
353
5
HOH
HOH
502
A
HOH
357
5
HOH
HOH
503
A
HOH
358
5
HOH
HOH
504
A
HOH
360
5
HOH
HOH
505
A
HOH
361
5
HOH
HOH
506
A
HOH
374
5
HOH
HOH
507
A
HOH
387
5
HOH
HOH
508
A
HOH
399
5
HOH
HOH
509
A
HOH
405
5
HOH
HOH
510
A
HOH
411
5
HOH
HOH
511
A
HOH
429
5
HOH
HOH
512
A
HOH
430
5
HOH
HOH
513
A
HOH
431
5
HOH
HOH
514
A
HOH
432
5
HOH
HOH
515
A
HOH
460
5
HOH
HOH
516
A
HOH
461
5
HOH
HOH
517
A
HOH
465
5
HOH
HOH
518
A
HOH
466
5
HOH
HOH
519
A
HOH
473
5
HOH
HOH
520
A
HOH
475
5
HOH
HOH
521
A
HOH
478
5
HOH
HOH
522
A
HOH
482
5
HOH
HOH
523
A
HOH
496
5
HOH
HOH
524
A
HOH
509
5
HOH
HOH
525
A
HOH
515
5
HOH
HOH
526
A
HOH
517
5
HOH
HOH
527
A
HOH
518
5
HOH
HOH
528
A
HOH
526
5
HOH
HOH
529
A
HOH
544
5
HOH
HOH
530
A
HOH
546
5
HOH
HOH
531
A
HOH
1
5
HOH
HOH
403
B
HOH
3
5
HOH
HOH
404
B
HOH
4
5
HOH
HOH
405
B
HOH
5
5
HOH
HOH
406
B
HOH
8
5
HOH
HOH
407
B
HOH
14
5
HOH
HOH
408
B
HOH
22
5
HOH
HOH
409
B
HOH
23
5
HOH
HOH
410
B
HOH
29
5
HOH
HOH
411
B
HOH
31
5
HOH
HOH
412
B
HOH
34
5
HOH
HOH
413
B
HOH
36
5
HOH
HOH
414
B
HOH
39
5
HOH
HOH
415
B
HOH
41
5
HOH
HOH
416
B
HOH
42
5
HOH
HOH
417
B
HOH
44
5
HOH
HOH
418
B
HOH
45
5
HOH
HOH
419
B
HOH
46
5
HOH
HOH
420
B
HOH
47
5
HOH
HOH
421
B
HOH
48
5
HOH
HOH
422
B
HOH
52
5
HOH
HOH
423
B
HOH
53
5
HOH
HOH
424
B
HOH
54
5
HOH
HOH
425
B
HOH
56
5
HOH
HOH
426
B
HOH
57
5
HOH
HOH
427
B
HOH
58
5
HOH
HOH
428
B
HOH
61
5
HOH
HOH
429
B
HOH
63
5
HOH
HOH
430
B
HOH
64
5
HOH
HOH
431
B
HOH
65
5
HOH
HOH
432
B
HOH
66
5
HOH
HOH
433
B
HOH
68
5
HOH
HOH
434
B
HOH
71
5
HOH
HOH
435
B
HOH
74
5
HOH
HOH
436
B
HOH
77
5
HOH
HOH
437
B
HOH
78
5
HOH
HOH
438
B
HOH
80
5
HOH
HOH
439
B
HOH
82
5
HOH
HOH
440
B
HOH
84
5
HOH
HOH
441
B
HOH
85
5
HOH
HOH
442
B
HOH
86
5
HOH
HOH
443
B
HOH
102
5
HOH
HOH
444
B
HOH
103
5
HOH
HOH
445
B
HOH
107
5
HOH
HOH
446
B
HOH
111
5
HOH
HOH
447
B
HOH
112
5
HOH
HOH
448
B
HOH
117
5
HOH
HOH
449
B
HOH
127
5
HOH
HOH
450
B
HOH
131
5
HOH
HOH
451
B
HOH
135
5
HOH
HOH
452
B
HOH
136
5
HOH
HOH
453
B
HOH
140
5
HOH
HOH
454
B
HOH
143
5
HOH
HOH
455
B
HOH
145
5
HOH
HOH
456
B
HOH
148
5
HOH
HOH
457
B
HOH
149
5
HOH
HOH
458
B
HOH
151
5
HOH
HOH
459
B
HOH
152
5
HOH
HOH
460
B
HOH
160
5
HOH
HOH
461
B
HOH
163
5
HOH
HOH
462
B
HOH
164
5
HOH
HOH
463
B
HOH
165
5
HOH
HOH
464
B
HOH
166
5
HOH
HOH
465
B
HOH
167
5
HOH
HOH
466
B
HOH
175
5
HOH
HOH
467
B
HOH
179
5
HOH
HOH
468
B
HOH
182
5
HOH
HOH
469
B
HOH
190
5
HOH
HOH
470
B
HOH
191
5
HOH
HOH
471
B
HOH
204
5
HOH
HOH
472
B
HOH
212
5
HOH
HOH
473
B
HOH
216
5
HOH
HOH
474
B
HOH
221
5
HOH
HOH
475
B
HOH
222
5
HOH
HOH
476
B
HOH
225
5
HOH
HOH
477
B
HOH
235
5
HOH
HOH
478
B
HOH
240
5
HOH
HOH
479
B
HOH
243
5
HOH
HOH
480
B
HOH
254
5
HOH
HOH
481
B
HOH
256
5
HOH
HOH
482
B
HOH
264
5
HOH
HOH
483
B
HOH
266
5
HOH
HOH
484
B
HOH
285
5
HOH
HOH
485
B
HOH
286
5
HOH
HOH
486
B
HOH
311
5
HOH
HOH
487
B
HOH
317
5
HOH
HOH
488
B
HOH
319
5
HOH
HOH
489
B
HOH
334
5
HOH
HOH
490
B
HOH
345
5
HOH
HOH
491
B
HOH
355
5
HOH
HOH
492
B
HOH
363
5
HOH
HOH
493
B
HOH
364
5
HOH
HOH
494
B
HOH
368
5
HOH
HOH
495
B
HOH
369
5
HOH
HOH
496
B
HOH
371
5
HOH
HOH
497
B
HOH
408
5
HOH
HOH
498
B
HOH
415
5
HOH
HOH
499
B
HOH
419
5
HOH
HOH
500
B
HOH
420
5
HOH
HOH
501
B
HOH
422
5
HOH
HOH
502
B
HOH
424
5
HOH
HOH
503
B
HOH
445
5
HOH
HOH
504
B
HOH
446
5
HOH
HOH
505
B
HOH
448
5
HOH
HOH
506
B
HOH
449
5
HOH
HOH
507
B
HOH
450
5
HOH
HOH
508
B
HOH
468
5
HOH
HOH
509
B
HOH
470
5
HOH
HOH
510
B
HOH
472
5
HOH
HOH
511
B
HOH
480
5
HOH
HOH
512
B
HOH
481
5
HOH
HOH
513
B
HOH
487
5
HOH
HOH
514
B
HOH
498
5
HOH
HOH
515
B
HOH
527
5
HOH
HOH
516
B
HOH
538
5
HOH
HOH
517
B
n
1
1
A
n
2
2
A
n
3
3
A
n
4
4
A
n
5
5
A
n
6
6
A
n
7
7
A
n
8
8
A
n
9
9
A
n
10
10
A
n
11
11
A
n
12
12
A
n
13
13
A
n
14
14
A
VAL
15
n
15
VAL
15
A
PRO
16
n
16
PRO
16
A
VAL
17
n
17
VAL
17
A
TYR
18
n
18
TYR
18
A
ILE
19
n
19
ILE
19
A
TYR
20
n
20
TYR
20
A
SER
21
n
21
SER
21
A
PRO
22
n
22
PRO
22
A
GLU
23
n
23
GLU
23
A
TYR
24
n
24
TYR
24
A
VAL
25
n
25
VAL
25
A
SER
26
n
26
SER
26
A
MET
27
n
27
MET
27
A
CYS
28
n
28
CYS
28
A
ASP
29
n
29
ASP
29
A
SER
30
n
30
SER
30
A
LEU
31
n
31
LEU
31
A
ALA
32
n
32
ALA
32
A
LYS
33
n
33
LYS
33
A
ILE
34
n
34
ILE
34
A
PRO
35
n
35
PRO
35
A
LYS
36
n
36
LYS
36
A
ARG
37
n
37
ARG
37
A
ALA
38
n
38
ALA
38
A
SER
39
n
39
SER
39
A
MET
40
n
40
MET
40
A
VAL
41
n
41
VAL
41
A
HIS
42
n
42
HIS
42
A
SER
43
n
43
SER
43
A
LEU
44
n
44
LEU
44
A
ILE
45
n
45
ILE
45
A
GLU
46
n
46
GLU
46
A
ALA
47
n
47
ALA
47
A
TYR
48
n
48
TYR
48
A
ALA
49
n
49
ALA
49
A
LEU
50
n
50
LEU
50
A
HIS
51
n
51
HIS
51
A
LYS
52
n
52
LYS
52
A
GLN
53
n
53
GLN
53
A
MET
54
n
54
MET
54
A
ARG
55
n
55
ARG
55
A
ILE
56
n
56
ILE
56
A
VAL
57
n
57
VAL
57
A
LYS
58
n
58
LYS
58
A
PRO
59
n
59
PRO
59
A
LYS
60
n
60
LYS
60
A
VAL
61
n
61
VAL
61
A
ALA
62
n
62
ALA
62
A
SER
63
n
63
SER
63
A
MET
64
n
64
MET
64
A
GLU
65
n
65
GLU
65
A
GLU
66
n
66
GLU
66
A
MET
67
n
67
MET
67
A
ALA
68
n
68
ALA
68
A
THR
69
n
69
THR
69
A
PHE
70
n
70
PHE
70
A
HIS
71
n
71
HIS
71
A
THR
72
n
72
THR
72
A
ASP
73
n
73
ASP
73
A
ALA
74
n
74
ALA
74
A
TYR
75
n
75
TYR
75
A
LEU
76
n
76
LEU
76
A
GLN
77
n
77
GLN
77
A
HIS
78
n
78
HIS
78
A
LEU
79
n
79
LEU
79
A
GLN
80
n
80
GLN
80
A
LYS
81
n
81
LYS
81
A
VAL
82
n
82
VAL
82
A
SER
83
n
83
SER
83
A
GLN
84
n
84
GLN
84
A
GLU
85
n
85
GLU
85
A
GLY
86
n
86
GLY
86
A
ASP
87
n
87
ASP
87
A
ASP
88
n
88
ASP
88
A
n
89
89
A
n
90
90
A
n
91
91
A
n
92
92
A
n
93
93
A
n
94
94
A
n
95
95
A
n
96
96
A
n
97
97
A
n
98
98
A
n
99
99
A
n
100
100
A
n
101
101
A
n
102
102
A
n
103
103
A
ALA
104
n
104
ALA
104
A
THR
105
n
105
THR
105
A
GLU
106
n
106
GLU
106
A
GLY
107
n
107
GLY
107
A
ILE
108
n
108
ILE
108
A
PHE
109
n
109
PHE
109
A
ASP
110
n
110
ASP
110
A
TYR
111
n
111
TYR
111
A
ALA
112
n
112
ALA
112
A
ALA
113
n
113
ALA
113
A
ALA
114
n
114
ALA
114
A
ILE
115
n
115
ILE
115
A
GLY
116
n
116
GLY
116
A
GLY
117
n
117
GLY
117
A
ALA
118
n
118
ALA
118
A
THR
119
n
119
THR
119
A
ILE
120
n
120
ILE
120
A
THR
121
n
121
THR
121
A
ALA
122
n
122
ALA
122
A
ALA
123
n
123
ALA
123
A
GLN
124
n
124
GLN
124
A
CYS
125
n
125
CYS
125
A
LEU
126
n
126
LEU
126
A
ILE
127
n
127
ILE
127
A
ASP
128
n
128
ASP
128
A
GLY
129
n
129
GLY
129
A
MET
130
n
130
MET
130
A
CYS
131
n
131
CYS
131
A
LYS
132
n
132
LYS
132
A
VAL
133
n
133
VAL
133
A
ALA
134
n
134
ALA
134
A
ILE
135
n
135
ILE
135
A
ASN
136
n
136
ASN
136
A
TRP
137
n
137
TRP
137
A
SER
138
n
138
SER
138
A
GLY
139
n
139
GLY
139
A
GLY
140
n
140
GLY
140
A
TRP
141
n
141
TRP
141
A
HIS
142
n
142
HIS
142
A
HIS
143
n
143
HIS
143
A
ALA
144
n
144
ALA
144
A
LYS
145
n
145
LYS
145
A
LYS
146
n
146
LYS
146
A
ASP
147
n
147
ASP
147
A
GLU
148
n
148
GLU
148
A
ALA
149
n
149
ALA
149
A
SER
150
n
150
SER
150
A
GLY
151
n
151
GLY
151
A
PHE
152
n
152
PHE
152
A
CYS
153
n
153
CYS
153
A
TYR
154
n
154
TYR
154
A
LEU
155
n
155
LEU
155
A
ASN
156
n
156
ASN
156
A
ASP
157
n
157
ASP
157
A
ALA
158
n
158
ALA
158
A
VAL
159
n
159
VAL
159
A
LEU
160
n
160
LEU
160
A
GLY
161
n
161
GLY
161
A
ILE
162
n
162
ILE
162
A
LEU
163
n
163
LEU
163
A
ARG
164
n
164
ARG
164
A
LEU
165
n
165
LEU
165
A
ARG
166
n
166
ARG
166
A
ARG
167
n
167
ARG
167
A
LYS
168
n
168
LYS
168
A
PHE
169
n
169
PHE
169
A
GLU
170
n
170
GLU
170
A
ARG
171
n
171
ARG
171
A
ILE
172
n
172
ILE
172
A
LEU
173
n
173
LEU
173
A
TYR
174
n
174
TYR
174
A
VAL
175
n
175
VAL
175
A
ASP
176
n
176
ASP
176
A
LEU
177
n
177
LEU
177
A
ASP
178
n
178
ASP
178
A
LEU
179
n
179
LEU
179
A
HIS
180
n
180
HIS
180
A
HIS
181
n
181
HIS
181
A
GLY
182
n
182
GLY
182
A
ASP
183
n
183
ASP
183
A
GLY
184
n
184
GLY
184
A
VAL
185
n
185
VAL
185
A
GLU
186
n
186
GLU
186
A
ASP
187
n
187
ASP
187
A
ALA
188
n
188
ALA
188
A
PHE
189
n
189
PHE
189
A
SER
190
n
190
SER
190
A
PHE
191
n
191
PHE
191
A
THR
192
n
192
THR
192
A
SER
193
n
193
SER
193
A
GLN
194
n
194
LYS
194
A
VAL
195
n
195
VAL
195
A
MET
196
n
196
MET
196
A
THR
197
n
197
THR
197
A
VAL
198
n
198
VAL
198
A
SER
199
n
199
SER
199
A
LEU
200
n
200
LEU
200
A
HIS
201
n
201
HIS
201
A
LYS
202
n
202
LYS
202
A
PHE
203
n
203
PHE
203
A
SER
204
n
204
SER
204
A
PRO
205
n
205
PRO
205
A
GLY
206
n
206
GLY
206
A
PHE
207
n
207
PHE
207
A
PHE
208
n
208
PHE
208
A
PRO
209
n
209
PRO
209
A
GLY
210
n
210
GLY
210
A
THR
211
n
211
THR
211
A
GLY
212
n
212
GLY
212
A
ASP
213
n
213
ASP
213
A
VAL
214
n
214
VAL
214
A
SER
215
n
215
SER
215
A
ASP
216
n
216
ASP
216
A
VAL
217
n
217
VAL
217
A
GLY
218
n
218
GLY
218
A
LEU
219
n
219
LEU
219
A
GLY
220
n
220
GLY
220
A
LYS
221
n
221
LYS
221
A
GLY
222
n
222
GLY
222
A
ARG
223
n
223
ARG
223
A
TYR
224
n
224
TYR
224
A
TYR
225
n
225
TYR
225
A
SER
226
n
226
SER
226
A
VAL
227
n
227
VAL
227
A
ASN
228
n
228
ASN
228
A
VAL
229
n
229
VAL
229
A
PRO
230
n
230
PRO
230
A
ILE
231
n
231
ILE
231
A
GLN
232
n
232
GLN
232
A
ASP
233
n
233
ASP
233
A
GLY
234
n
234
GLY
234
A
ILE
235
n
235
ILE
235
A
GLN
236
n
236
GLN
236
A
ASP
237
n
237
ASP
237
A
GLU
238
n
238
GLU
238
A
LYS
239
n
239
LYS
239
A
TYR
240
n
240
TYR
240
A
TYR
241
n
241
TYR
241
A
GLN
242
n
242
GLN
242
A
ILE
243
n
243
ILE
243
A
CYS
244
n
244
CYS
244
A
GLU
245
n
245
GLU
245
A
SER
246
n
246
SER
246
A
VAL
247
n
247
VAL
247
A
LEU
248
n
248
LEU
248
A
LYS
249
n
249
LYS
249
A
GLU
250
n
250
GLU
250
A
VAL
251
n
251
VAL
251
A
TYR
252
n
252
TYR
252
A
GLN
253
n
253
GLN
253
A
ALA
254
n
254
ALA
254
A
PHE
255
n
255
PHE
255
A
ASN
256
n
256
ASN
256
A
PRO
257
n
257
PRO
257
A
LYS
258
n
258
LYS
258
A
ALA
259
n
259
ALA
259
A
VAL
260
n
260
VAL
260
A
VAL
261
n
261
VAL
261
A
LEU
262
n
262
LEU
262
A
GLN
263
n
263
GLN
263
A
LEU
264
n
264
LEU
264
A
GLY
265
n
265
GLY
265
A
ALA
266
n
266
ALA
266
A
ASP
267
n
267
ASP
267
A
THR
268
n
268
THR
268
A
ILE
269
n
269
ILE
269
A
ALA
270
n
270
ALA
270
A
GLY
271
n
271
GLY
271
A
ASP
272
n
272
ASP
272
A
PRO
273
n
273
PRO
273
A
MET
274
n
274
MET
274
A
CYS
275
n
275
CYS
275
A
SER
276
n
276
SER
276
A
PHE
277
n
277
PHE
277
A
ASN
278
n
278
ASN
278
A
MET
279
n
279
MET
279
A
THR
280
n
280
THR
280
A
PRO
281
n
281
PRO
281
A
VAL
282
n
282
VAL
282
A
GLY
283
n
283
GLY
283
A
ILE
284
n
284
ILE
284
A
GLY
285
n
285
GLY
285
A
LYS
286
n
286
LYS
286
A
CYS
287
n
287
CYS
287
A
LEU
288
n
288
LEU
288
A
LYS
289
n
289
LYS
289
A
TYR
290
n
290
TYR
290
A
ILE
291
n
291
ILE
291
A
LEU
292
n
292
LEU
292
A
GLN
293
n
293
GLN
293
A
TRP
294
n
294
TRP
294
A
GLN
295
n
295
GLN
295
A
LEU
296
n
296
LEU
296
A
ALA
297
n
297
ALA
297
A
THR
298
n
298
THR
298
A
LEU
299
n
299
LEU
299
A
ILE
300
n
300
ILE
300
A
LEU
301
n
301
LEU
301
A
GLY
302
n
302
GLY
302
A
GLY
303
n
303
GLY
303
A
GLY
304
n
304
GLY
304
A
GLY
305
n
305
GLY
305
A
TYR
306
n
306
TYR
306
A
ASN
307
n
307
ASN
307
A
LEU
308
n
308
LEU
308
A
ALA
309
n
309
ALA
309
A
ASN
310
n
310
ASN
310
A
THR
311
n
311
THR
311
A
ALA
312
n
312
ALA
312
A
ARG
313
n
313
ARG
313
A
CYS
314
n
314
CYS
314
A
TRP
315
n
315
TRP
315
A
THR
316
n
316
THR
316
A
TYR
317
n
317
TYR
317
A
LEU
318
n
318
LEU
318
A
THR
319
n
319
THR
319
A
GLY
320
n
320
GLY
320
A
VAL
321
n
321
VAL
321
A
ILE
322
n
322
ILE
322
A
LEU
323
n
323
LEU
323
A
GLY
324
n
324
GLY
324
A
LYS
325
n
325
LYS
325
A
THR
326
n
326
THR
326
A
LEU
327
n
327
LEU
327
A
SER
328
n
328
SER
328
A
SER
329
n
329
SER
329
A
GLU
330
n
330
GLU
330
A
ILE
331
n
331
ILE
331
A
PRO
332
n
332
PRO
332
A
ASP
333
n
333
ASP
333
A
HIS
334
n
334
HIS
334
A
GLU
335
n
335
GLU
335
A
PHE
336
n
336
PHE
336
A
PHE
337
n
337
PHE
337
A
THR
338
n
338
THR
338
A
ALA
339
n
339
ALA
339
A
TYR
340
n
340
TYR
340
A
GLY
341
n
341
GLY
341
A
PRO
342
n
342
PRO
342
A
ASP
343
n
343
ASP
343
A
TYR
344
n
344
TYR
344
A
VAL
345
n
345
VAL
345
A
LEU
346
n
346
LEU
346
A
GLU
347
n
347
GLU
347
A
ILE
348
n
348
ILE
348
A
THR
349
n
349
THR
349
A
PRO
350
n
350
PRO
350
A
SER
351
n
351
SER
351
A
CYS
352
n
352
CYS
352
A
ARG
353
n
353
ARG
353
A
PRO
354
n
354
PRO
354
A
ASP
355
n
355
ASP
355
A
ARG
356
n
356
ARG
356
A
ASN
357
n
357
ASN
357
A
GLU
358
n
358
GLU
358
A
PRO
359
n
359
PRO
359
A
HIS
360
n
360
HIS
360
A
ARG
361
n
361
ARG
361
A
ILE
362
n
362
ILE
362
A
GLN
363
n
363
GLN
363
A
GLN
364
n
364
GLN
364
A
ILE
365
n
365
ILE
365
A
LEU
366
n
366
LEU
366
A
ASN
367
n
367
ASN
367
A
TYR
368
n
368
TYR
368
A
ILE
369
n
369
ILE
369
A
LYS
370
n
370
LYS
370
A
GLY
371
n
371
GLY
371
A
ASN
372
n
372
ASN
372
A
LEU
373
n
373
LEU
373
A
LYS
374
n
374
LYS
374
A
HIS
375
n
375
HIS
375
A
VAL
376
n
376
VAL
376
A
VAL
377
n
377
VAL
377
A
n
1
1
B
n
2
2
B
n
3
3
B
n
4
4
B
n
5
5
B
n
6
6
B
n
7
7
B
n
8
8
B
n
9
9
B
n
10
10
B
n
11
11
B
n
12
12
B
n
13
13
B
n
14
14
B
VAL
15
n
15
VAL
15
B
PRO
16
n
16
PRO
16
B
VAL
17
n
17
VAL
17
B
TYR
18
n
18
TYR
18
B
ILE
19
n
19
ILE
19
B
TYR
20
n
20
TYR
20
B
SER
21
n
21
SER
21
B
PRO
22
n
22
PRO
22
B
GLU
23
n
23
GLU
23
B
TYR
24
n
24
TYR
24
B
VAL
25
n
25
VAL
25
B
SER
26
n
26
SER
26
B
MET
27
n
27
MET
27
B
CYS
28
n
28
CYS
28
B
ASP
29
n
29
ASP
29
B
SER
30
n
30
SER
30
B
LEU
31
n
31
LEU
31
B
ALA
32
n
32
ALA
32
B
LYS
33
n
33
LYS
33
B
ILE
34
n
34
ILE
34
B
PRO
35
n
35
PRO
35
B
LYS
36
n
36
LYS
36
B
ARG
37
n
37
ARG
37
B
ALA
38
n
38
ALA
38
B
SER
39
n
39
SER
39
B
MET
40
n
40
MET
40
B
VAL
41
n
41
VAL
41
B
HIS
42
n
42
HIS
42
B
SER
43
n
43
SER
43
B
LEU
44
n
44
LEU
44
B
ILE
45
n
45
ILE
45
B
GLU
46
n
46
GLU
46
B
ALA
47
n
47
ALA
47
B
TYR
48
n
48
TYR
48
B
ALA
49
n
49
ALA
49
B
LEU
50
n
50
LEU
50
B
HIS
51
n
51
HIS
51
B
LYS
52
n
52
LYS
52
B
GLN
53
n
53
GLN
53
B
MET
54
n
54
MET
54
B
ARG
55
n
55
ARG
55
B
ILE
56
n
56
ILE
56
B
VAL
57
n
57
VAL
57
B
LYS
58
n
58
LYS
58
B
PRO
59
n
59
PRO
59
B
LYS
60
n
60
LYS
60
B
VAL
61
n
61
VAL
61
B
ALA
62
n
62
ALA
62
B
SER
63
n
63
SER
63
B
MET
64
n
64
MET
64
B
GLU
65
n
65
GLU
65
B
GLU
66
n
66
GLU
66
B
MET
67
n
67
MET
67
B
ALA
68
n
68
ALA
68
B
THR
69
n
69
THR
69
B
PHE
70
n
70
PHE
70
B
HIS
71
n
71
HIS
71
B
THR
72
n
72
THR
72
B
ASP
73
n
73
ASP
73
B
ALA
74
n
74
ALA
74
B
TYR
75
n
75
TYR
75
B
LEU
76
n
76
LEU
76
B
GLN
77
n
77
GLN
77
B
HIS
78
n
78
HIS
78
B
LEU
79
n
79
LEU
79
B
GLN
80
n
80
GLN
80
B
LYS
81
n
81
LYS
81
B
VAL
82
n
82
VAL
82
B
SER
83
n
83
SER
83
B
GLN
84
n
84
GLN
84
B
GLU
85
n
85
GLU
85
B
GLY
86
n
86
GLY
86
B
ASP
87
n
87
ASP
87
B
ASP
88
n
88
ASP
88
B
n
89
89
B
n
90
90
B
n
91
91
B
n
92
92
B
n
93
93
B
n
94
94
B
n
95
95
B
n
96
96
B
n
97
97
B
n
98
98
B
n
99
99
B
n
100
100
B
n
101
101
B
n
102
102
B
n
103
103
B
ALA
104
n
104
ALA
104
B
THR
105
n
105
THR
105
B
GLU
106
n
106
GLU
106
B
GLY
107
n
107
GLY
107
B
ILE
108
n
108
ILE
108
B
PHE
109
n
109
PHE
109
B
ASP
110
n
110
ASP
110
B
TYR
111
n
111
TYR
111
B
ALA
112
n
112
ALA
112
B
ALA
113
n
113
ALA
113
B
ALA
114
n
114
ALA
114
B
ILE
115
n
115
ILE
115
B
GLY
116
n
116
GLY
116
B
GLY
117
n
117
GLY
117
B
ALA
118
n
118
ALA
118
B
THR
119
n
119
THR
119
B
ILE
120
n
120
ILE
120
B
THR
121
n
121
THR
121
B
ALA
122
n
122
ALA
122
B
ALA
123
n
123
ALA
123
B
GLN
124
n
124
GLN
124
B
CYS
125
n
125
CYS
125
B
LEU
126
n
126
LEU
126
B
ILE
127
n
127
ILE
127
B
ASP
128
n
128
ASP
128
B
GLY
129
n
129
GLY
129
B
MET
130
n
130
MET
130
B
CYS
131
n
131
CYS
131
B
LYS
132
n
132
LYS
132
B
VAL
133
n
133
VAL
133
B
ALA
134
n
134
ALA
134
B
ILE
135
n
135
ILE
135
B
ASN
136
n
136
ASN
136
B
TRP
137
n
137
TRP
137
B
SER
138
n
138
SER
138
B
GLY
139
n
139
GLY
139
B
GLY
140
n
140
GLY
140
B
TRP
141
n
141
TRP
141
B
HIS
142
n
142
HIS
142
B
HIS
143
n
143
HIS
143
B
ALA
144
n
144
ALA
144
B
LYS
145
n
145
LYS
145
B
LYS
146
n
146
LYS
146
B
ASP
147
n
147
ASP
147
B
GLU
148
n
148
GLU
148
B
ALA
149
n
149
ALA
149
B
SER
150
n
150
SER
150
B
GLY
151
n
151
GLY
151
B
PHE
152
n
152
PHE
152
B
CYS
153
n
153
CYS
153
B
TYR
154
n
154
TYR
154
B
LEU
155
n
155
LEU
155
B
ASN
156
n
156
ASN
156
B
ASP
157
n
157
ASP
157
B
ALA
158
n
158
ALA
158
B
VAL
159
n
159
VAL
159
B
LEU
160
n
160
LEU
160
B
GLY
161
n
161
GLY
161
B
ILE
162
n
162
ILE
162
B
LEU
163
n
163
LEU
163
B
ARG
164
n
164
ARG
164
B
LEU
165
n
165
LEU
165
B
ARG
166
n
166
ARG
166
B
ARG
167
n
167
ARG
167
B
LYS
168
n
168
LYS
168
B
PHE
169
n
169
PHE
169
B
GLU
170
n
170
GLU
170
B
ARG
171
n
171
ARG
171
B
ILE
172
n
172
ILE
172
B
LEU
173
n
173
LEU
173
B
TYR
174
n
174
TYR
174
B
VAL
175
n
175
VAL
175
B
ASP
176
n
176
ASP
176
B
LEU
177
n
177
LEU
177
B
ASP
178
n
178
ASP
178
B
LEU
179
n
179
LEU
179
B
HIS
180
n
180
HIS
180
B
HIS
181
n
181
HIS
181
B
GLY
182
n
182
GLY
182
B
ASP
183
n
183
ASP
183
B
GLY
184
n
184
GLY
184
B
VAL
185
n
185
VAL
185
B
GLU
186
n
186
GLU
186
B
ASP
187
n
187
ASP
187
B
ALA
188
n
188
ALA
188
B
PHE
189
n
189
PHE
189
B
SER
190
n
190
SER
190
B
PHE
191
n
191
PHE
191
B
THR
192
n
192
THR
192
B
SER
193
n
193
SER
193
B
LYS
194
n
194
LYS
194
B
VAL
195
n
195
VAL
195
B
MET
196
n
196
MET
196
B
THR
197
n
197
THR
197
B
VAL
198
n
198
VAL
198
B
SER
199
n
199
SER
199
B
LEU
200
n
200
LEU
200
B
HIS
201
n
201
HIS
201
B
LYS
202
n
202
LYS
202
B
PHE
203
n
203
PHE
203
B
SER
204
n
204
SER
204
B
PRO
205
n
205
PRO
205
B
GLY
206
n
206
GLY
206
B
PHE
207
n
207
PHE
207
B
PHE
208
n
208
PHE
208
B
PRO
209
n
209
PRO
209
B
GLY
210
n
210
GLY
210
B
THR
211
n
211
THR
211
B
GLY
212
n
212
GLY
212
B
ASP
213
n
213
ASP
213
B
VAL
214
n
214
VAL
214
B
SER
215
n
215
SER
215
B
ASP
216
n
216
ASP
216
B
VAL
217
n
217
VAL
217
B
GLY
218
n
218
GLY
218
B
LEU
219
n
219
LEU
219
B
GLY
220
n
220
GLY
220
B
LYS
221
n
221
LYS
221
B
GLY
222
n
222
GLY
222
B
ARG
223
n
223
ARG
223
B
TYR
224
n
224
TYR
224
B
TYR
225
n
225
TYR
225
B
SER
226
n
226
SER
226
B
VAL
227
n
227
VAL
227
B
ASN
228
n
228
ASN
228
B
VAL
229
n
229
VAL
229
B
PRO
230
n
230
PRO
230
B
ILE
231
n
231
ILE
231
B
GLN
232
n
232
GLN
232
B
ASP
233
n
233
ASP
233
B
GLY
234
n
234
GLY
234
B
ILE
235
n
235
ILE
235
B
GLN
236
n
236
GLN
236
B
ASP
237
n
237
ASP
237
B
GLU
238
n
238
GLU
238
B
LYS
239
n
239
LYS
239
B
TYR
240
n
240
TYR
240
B
TYR
241
n
241
TYR
241
B
GLN
242
n
242
GLN
242
B
ILE
243
n
243
ILE
243
B
CYS
244
n
244
CYS
244
B
GLU
245
n
245
GLU
245
B
SER
246
n
246
SER
246
B
VAL
247
n
247
VAL
247
B
LEU
248
n
248
LEU
248
B
LYS
249
n
249
LYS
249
B
GLU
250
n
250
GLU
250
B
VAL
251
n
251
VAL
251
B
TYR
252
n
252
TYR
252
B
GLN
253
n
253
GLN
253
B
ALA
254
n
254
ALA
254
B
PHE
255
n
255
PHE
255
B
ASN
256
n
256
ASN
256
B
PRO
257
n
257
PRO
257
B
LYS
258
n
258
LYS
258
B
ALA
259
n
259
ALA
259
B
VAL
260
n
260
VAL
260
B
VAL
261
n
261
VAL
261
B
LEU
262
n
262
LEU
262
B
GLN
263
n
263
GLN
263
B
LEU
264
n
264
LEU
264
B
GLY
265
n
265
GLY
265
B
ALA
266
n
266
ALA
266
B
ASP
267
n
267
ASP
267
B
THR
268
n
268
THR
268
B
ILE
269
n
269
ILE
269
B
ALA
270
n
270
ALA
270
B
GLY
271
n
271
GLY
271
B
ASP
272
n
272
ASP
272
B
PRO
273
n
273
PRO
273
B
MET
274
n
274
MET
274
B
CYS
275
n
275
CYS
275
B
SER
276
n
276
SER
276
B
PHE
277
n
277
PHE
277
B
ASN
278
n
278
ASN
278
B
MET
279
n
279
MET
279
B
THR
280
n
280
THR
280
B
PRO
281
n
281
PRO
281
B
VAL
282
n
282
VAL
282
B
GLY
283
n
283
GLY
283
B
ILE
284
n
284
ILE
284
B
GLY
285
n
285
GLY
285
B
LYS
286
n
286
LYS
286
B
CYS
287
n
287
CYS
287
B
LEU
288
n
288
LEU
288
B
LYS
289
n
289
LYS
289
B
TYR
290
n
290
TYR
290
B
ILE
291
n
291
ILE
291
B
LEU
292
n
292
LEU
292
B
GLN
293
n
293
GLN
293
B
TRP
294
n
294
TRP
294
B
GLN
295
n
295
GLN
295
B
LEU
296
n
296
LEU
296
B
ALA
297
n
297
ALA
297
B
THR
298
n
298
THR
298
B
LEU
299
n
299
LEU
299
B
ILE
300
n
300
ILE
300
B
LEU
301
n
301
LEU
301
B
GLY
302
n
302
GLY
302
B
GLY
303
n
303
GLY
303
B
GLY
304
n
304
GLY
304
B
GLY
305
n
305
GLY
305
B
TYR
306
n
306
TYR
306
B
ASN
307
n
307
ASN
307
B
LEU
308
n
308
LEU
308
B
ALA
309
n
309
ALA
309
B
ASN
310
n
310
ASN
310
B
THR
311
n
311
THR
311
B
ALA
312
n
312
ALA
312
B
ARG
313
n
313
ARG
313
B
CYS
314
n
314
CYS
314
B
TRP
315
n
315
TRP
315
B
THR
316
n
316
THR
316
B
TYR
317
n
317
TYR
317
B
LEU
318
n
318
LEU
318
B
THR
319
n
319
THR
319
B
GLY
320
n
320
GLY
320
B
VAL
321
n
321
VAL
321
B
ILE
322
n
322
ILE
322
B
LEU
323
n
323
LEU
323
B
GLY
324
n
324
GLY
324
B
LYS
325
n
325
LYS
325
B
THR
326
n
326
THR
326
B
LEU
327
n
327
LEU
327
B
SER
328
n
328
SER
328
B
SER
329
n
329
SER
329
B
GLU
330
n
330
GLU
330
B
ILE
331
n
331
ILE
331
B
PRO
332
n
332
PRO
332
B
ASP
333
n
333
ASP
333
B
HIS
334
n
334
HIS
334
B
GLU
335
n
335
GLU
335
B
PHE
336
n
336
PHE
336
B
PHE
337
n
337
PHE
337
B
THR
338
n
338
THR
338
B
ALA
339
n
339
ALA
339
B
TYR
340
n
340
TYR
340
B
GLY
341
n
341
GLY
341
B
PRO
342
n
342
PRO
342
B
ASP
343
n
343
ASP
343
B
TYR
344
n
344
TYR
344
B
VAL
345
n
345
VAL
345
B
LEU
346
n
346
LEU
346
B
GLU
347
n
347
GLU
347
B
ILE
348
n
348
ILE
348
B
THR
349
n
349
THR
349
B
PRO
350
n
350
PRO
350
B
SER
351
n
351
SER
351
B
CYS
352
n
352
CYS
352
B
ARG
353
n
353
ARG
353
B
PRO
354
n
354
PRO
354
B
ASP
355
n
355
ASP
355
B
ARG
356
n
356
ARG
356
B
ASN
357
n
357
ASN
357
B
GLU
358
n
358
GLU
358
B
PRO
359
n
359
PRO
359
B
HIS
360
n
360
HIS
360
B
ARG
361
n
361
ARG
361
B
ILE
362
n
362
ILE
362
B
GLN
363
n
363
GLN
363
B
GLN
364
n
364
GLN
364
B
ILE
365
n
365
ILE
365
B
LEU
366
n
366
LEU
366
B
ASN
367
n
367
ASN
367
B
TYR
368
n
368
TYR
368
B
ILE
369
n
369
ILE
369
B
SER
370
n
370
LYS
370
B
GLY
371
n
371
GLY
371
B
ASN
372
n
372
ASN
372
B
LEU
373
n
373
LEU
373
B
LYS
374
n
374
LYS
374
B
HIS
375
n
375
HIS
375
B
VAL
376
n
376
VAL
376
B
VAL
377
n
377
VAL
377
B
author_and_software_defined_assembly
PISA
2
dimeric
3560
-109
25880
A
LEU
177
A
O
LEU
177
1_555
A
NA
401
D
NA
NA
1_555
A
ASP
178
A
O
ASP
178
1_555
70.4
A
LEU
177
A
O
LEU
177
1_555
A
NA
401
D
NA
NA
1_555
A
LEU
200
A
O
LEU
200
1_555
120.1
A
ASP
178
A
O
ASP
178
1_555
A
NA
401
D
NA
NA
1_555
A
LEU
200
A
O
LEU
200
1_555
64.4
A
LEU
177
A
O
LEU
177
1_555
A
NA
401
D
NA
NA
1_555
A
TYR
240
A
OH
TYR
240
1_555
92.9
A
ASP
178
A
O
ASP
178
1_555
A
NA
401
D
NA
NA
1_555
A
TYR
240
A
OH
TYR
240
1_555
151.0
A
LEU
200
A
O
LEU
200
1_555
A
NA
401
D
NA
NA
1_555
A
TYR
240
A
OH
TYR
240
1_555
108.3
A
ASP
178
A
OD1
ASP
178
1_555
A
ZN
400
C
ZN
ZN
1_555
A
ASP
178
A
OD2
ASP
178
1_555
51.2
A
ASP
178
A
OD1
ASP
178
1_555
A
ZN
400
C
ZN
ZN
1_555
A
HIS
180
A
ND1
HIS
180
1_555
147.5
A
ASP
178
A
OD2
ASP
178
1_555
A
ZN
400
C
ZN
ZN
1_555
A
HIS
180
A
ND1
HIS
180
1_555
96.7
A
ASP
178
A
OD1
ASP
178
1_555
A
ZN
400
C
ZN
ZN
1_555
A
ASP
267
A
OD2
ASP
267
1_555
77.8
A
ASP
178
A
OD2
ASP
178
1_555
A
ZN
400
C
ZN
ZN
1_555
A
ASP
267
A
OD2
ASP
267
1_555
91.7
A
HIS
180
A
ND1
HIS
180
1_555
A
ZN
400
C
ZN
ZN
1_555
A
ASP
267
A
OD2
ASP
267
1_555
113.2
A
ASP
178
A
OD1
ASP
178
1_555
A
ZN
400
C
ZN
ZN
1_555
A
CRI
402
E
O
CRI
1_555
125.5
A
ASP
178
A
OD2
ASP
178
1_555
A
ZN
400
C
ZN
ZN
1_555
A
CRI
402
E
O
CRI
1_555
165.1
A
HIS
180
A
ND1
HIS
180
1_555
A
ZN
400
C
ZN
ZN
1_555
A
CRI
402
E
O
CRI
1_555
83.7
A
ASP
267
A
OD2
ASP
267
1_555
A
ZN
400
C
ZN
ZN
1_555
A
CRI
402
E
O
CRI
1_555
101.9
B
ASP
176
B
O
ASP
176
1_555
B
NA
401
G
NA
NA
1_555
B
ASP
176
B
OD1
ASP
176
1_555
68.6
B
ASP
176
B
O
ASP
176
1_555
B
NA
401
G
NA
NA
1_555
B
ASP
178
B
O
ASP
178
1_555
118.4
B
ASP
176
B
OD1
ASP
176
1_555
B
NA
401
G
NA
NA
1_555
B
ASP
178
B
O
ASP
178
1_555
88.0
B
ASP
176
B
O
ASP
176
1_555
B
NA
401
G
NA
NA
1_555
B
HIS
180
B
O
HIS
180
1_555
146.9
B
ASP
176
B
OD1
ASP
176
1_555
B
NA
401
G
NA
NA
1_555
B
HIS
180
B
O
HIS
180
1_555
79.4
B
ASP
178
B
O
ASP
178
1_555
B
NA
401
G
NA
NA
1_555
B
HIS
180
B
O
HIS
180
1_555
67.2
B
ASP
176
B
O
ASP
176
1_555
B
NA
401
G
NA
NA
1_555
B
LEU
200
B
O
LEU
200
1_555
83.1
B
ASP
176
B
OD1
ASP
176
1_555
B
NA
401
G
NA
NA
1_555
B
LEU
200
B
O
LEU
200
1_555
150.5
B
ASP
178
B
O
ASP
178
1_555
B
NA
401
G
NA
NA
1_555
B
LEU
200
B
O
LEU
200
1_555
98.6
B
HIS
180
B
O
HIS
180
1_555
B
NA
401
G
NA
NA
1_555
B
LEU
200
B
O
LEU
200
1_555
129.7
B
ASP
178
B
OD2
ASP
178
1_555
B
ZN
400
F
ZN
ZN
1_555
B
HIS
180
B
ND1
HIS
180
1_555
94.5
B
ASP
178
B
OD2
ASP
178
1_555
B
ZN
400
F
ZN
ZN
1_555
B
ASP
267
B
OD2
ASP
267
1_555
84.5
B
HIS
180
B
ND1
HIS
180
1_555
B
ZN
400
F
ZN
ZN
1_555
B
ASP
267
B
OD2
ASP
267
1_555
87.1
B
ASP
178
B
OD2
ASP
178
1_555
B
ZN
400
F
ZN
ZN
1_555
B
CRI
402
H
OH
CRI
1_555
92.2
B
HIS
180
B
ND1
HIS
180
1_555
B
ZN
400
F
ZN
ZN
1_555
B
CRI
402
H
OH
CRI
1_555
107.6
B
ASP
267
B
OD2
ASP
267
1_555
B
ZN
400
F
ZN
ZN
1_555
B
CRI
402
H
OH
CRI
1_555
165.2
B
ASP
178
B
OD2
ASP
178
1_555
B
ZN
400
F
ZN
ZN
1_555
B
CRI
402
H
N
CRI
1_555
122.8
B
HIS
180
B
ND1
HIS
180
1_555
B
ZN
400
F
ZN
ZN
1_555
B
CRI
402
H
N
CRI
1_555
93.3
B
ASP
267
B
OD2
ASP
267
1_555
B
ZN
400
F
ZN
ZN
1_555
B
CRI
402
H
N
CRI
1_555
152.5
B
CRI
402
H
OH
CRI
1_555
B
ZN
400
F
ZN
ZN
1_555
B
CRI
402
H
N
CRI
1_555
32.3
B
ASP
178
B
OD2
ASP
178
1_555
B
ZN
400
F
ZN
ZN
1_555
B
CRI
402
H
O
CRI
1_555
178.7
B
HIS
180
B
ND1
HIS
180
1_555
B
ZN
400
F
ZN
ZN
1_555
B
CRI
402
H
O
CRI
1_555
86.8
B
ASP
267
B
OD2
ASP
267
1_555
B
ZN
400
F
ZN
ZN
1_555
B
CRI
402
H
O
CRI
1_555
95.7
B
CRI
402
H
OH
CRI
1_555
B
ZN
400
F
ZN
ZN
1_555
B
CRI
402
H
O
CRI
1_555
87.2
B
CRI
402
H
N
CRI
1_555
B
ZN
400
F
ZN
ZN
1_555
B
CRI
402
H
O
CRI
1_555
56.9
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
ARG
55
A
O
ARG
55
A
N
TYR
18
A
N
TYR
18
A
N
ILE
19
A
N
ILE
19
A
O
ILE
135
A
O
ILE
135
A
N
ASN
136
A
N
ASN
136
A
O
ILE
300
A
O
ILE
300
A
O
ALA
297
A
O
ALA
297
A
N
VAL
260
A
N
VAL
260
A
O
VAL
261
A
O
VAL
261
A
N
VAL
175
A
N
VAL
175
A
N
ILE
172
A
N
ILE
172
A
O
MET
196
A
O
MET
196
A
N
THR
197
A
N
THR
197
A
O
VAL
227
A
O
VAL
227
A
N
LEU
219
A
N
LEU
219
A
O
GLY
222
A
O
GLY
222
B
O
ARG
55
B
O
ARG
55
B
N
TYR
18
B
N
TYR
18
B
N
VAL
17
B
N
VAL
17
B
O
ILE
135
B
O
ILE
135
B
N
ALA
134
B
N
ALA
134
B
O
ILE
300
B
O
ILE
300
B
O
LEU
299
B
O
LEU
299
B
N
LEU
262
B
N
LEU
262
B
O
GLN
263
B
O
GLN
263
B
N
VAL
175
B
N
VAL
175
B
N
TYR
174
B
N
TYR
174
B
O
VAL
198
B
O
VAL
198
B
N
THR
197
B
N
THR
197
B
O
VAL
227
B
O
VAL
227
1
A
MET
1
A
MET
1
1
Y
1
A
GLU
2
A
GLU
2
1
Y
1
A
GLU
3
A
GLU
3
1
Y
1
A
PRO
4
A
PRO
4
1
Y
1
A
GLU
5
A
GLU
5
1
Y
1
A
GLU
6
A
GLU
6
1
Y
1
A
PRO
7
A
PRO
7
1
Y
1
A
ALA
8
A
ALA
8
1
Y
1
A
ASP
9
A
ASP
9
1
Y
1
A
SER
10
A
SER
10
1
Y
1
A
GLY
11
A
GLY
11
1
Y
1
A
GLN
12
A
GLN
12
1
Y
1
A
SER
13
A
SER
13
1
Y
1
A
LEU
14
A
LEU
14
1
Y
1
A
ASP
89
A
ASP
89
1
Y
1
A
HIS
90
A
HIS
90
1
Y
1
A
PRO
91
A
PRO
91
1
Y
1
A
ASP
92
A
ASP
92
1
Y
1
A
SER
93
A
SER
93
1
Y
1
A
ILE
94
A
ILE
94
1
Y
1
A
GLU
95
A
GLU
95
1
Y
1
A
TYR
96
A
TYR
96
1
Y
1
A
GLY
97
A
GLY
97
1
Y
1
A
LEU
98
A
LEU
98
1
Y
1
A
GLY
99
A
GLY
99
1
Y
1
A
TYR
100
A
TYR
100
1
Y
1
A
ASP
101
A
ASP
101
1
Y
1
A
CYS
102
A
CYS
102
1
Y
1
A
PRO
103
A
PRO
103
1
Y
1
B
MET
1
B
MET
1
1
Y
1
B
GLU
2
B
GLU
2
1
Y
1
B
GLU
3
B
GLU
3
1
Y
1
B
PRO
4
B
PRO
4
1
Y
1
B
GLU
5
B
GLU
5
1
Y
1
B
GLU
6
B
GLU
6
1
Y
1
B
PRO
7
B
PRO
7
1
Y
1
B
ALA
8
B
ALA
8
1
Y
1
B
ASP
9
B
ASP
9
1
Y
1
B
SER
10
B
SER
10
1
Y
1
B
GLY
11
B
GLY
11
1
Y
1
B
GLN
12
B
GLN
12
1
Y
1
B
SER
13
B
SER
13
1
Y
1
B
LEU
14
B
LEU
14
1
Y
1
B
ASP
89
B
ASP
89
1
Y
1
B
HIS
90
B
HIS
90
1
Y
1
B
PRO
91
B
PRO
91
1
Y
1
B
ASP
92
B
ASP
92
1
Y
1
B
SER
93
B
SER
93
1
Y
1
B
ILE
94
B
ILE
94
1
Y
1
B
GLU
95
B
GLU
95
1
Y
1
B
TYR
96
B
TYR
96
1
Y
1
B
GLY
97
B
GLY
97
1
Y
1
B
LEU
98
B
LEU
98
1
Y
1
B
GLY
99
B
GLY
99
1
Y
1
B
TYR
100
B
TYR
100
1
Y
1
B
ASP
101
B
ASP
101
1
Y
1
B
CYS
102
B
CYS
102
1
Y
1
B
PRO
103
B
PRO
103
1
Y
1
A
B
HB3
HG3
LYS
LYS
33
33
0.70
1
B
B
O
H1
GLN
HOH
53
471
1.47
1
B
B
OG
H1
SER
HOH
39
465
1.47
1
B
B
OG
H2
SER
HOH
150
454
1.51
1
A
A
OG
H2
SER
HOH
190
445
1.52
1
A
B
CB
HG3
LYS
LYS
33
33
1.53
1
A
A
OG
H1
SER
HOH
351
472
1.53
1
A
A
O
H1
LEU
HOH
163
517
1.55
1
B
B
O
H2
GLY
HOH
182
419
1.56
1
A
B
HB3
CG
LYS
LYS
33
33
1.56
1
B
B
O
H2
TYR
HOH
340
420
1.56
1
B
B
O
H2
CYS
HOH
275
488
1.57
1
A
A
O
H2
GLY
HOH
218
521
1.58
1
A
A
O
H2
CYS
HOH
275
491
1.59
1
A
A
PHE
PRO
208
209
-35.22
1
A
ARG
37
0.196
SIDE CHAIN
1
A
ARG
55
0.269
SIDE CHAIN
1
A
ARG
164
0.110
SIDE CHAIN
1
A
ARG
166
0.237
SIDE CHAIN
1
A
ARG
167
0.296
SIDE CHAIN
1
A
ARG
171
0.307
SIDE CHAIN
1
A
ARG
223
0.077
SIDE CHAIN
1
A
ARG
313
0.181
SIDE CHAIN
1
A
ARG
356
0.310
SIDE CHAIN
1
A
ARG
361
0.106
SIDE CHAIN
1
B
ARG
55
0.312
SIDE CHAIN
1
B
ARG
171
0.223
SIDE CHAIN
1
B
ARG
223
0.091
SIDE CHAIN
1
B
ARG
313
0.319
SIDE CHAIN
1
B
ARG
353
0.248
SIDE CHAIN
1
B
ARG
356
0.220
SIDE CHAIN
1
B
ARG
361
0.293
SIDE CHAIN
1
-7.24
1.00
110.10
102.86
A
A
A
CG
CD1
NE1
TRP
TRP
TRP
137
137
137
N
1
7.94
0.90
109.00
116.94
A
A
A
CD1
NE1
CE2
TRP
TRP
TRP
137
137
137
N
1
8.59
1.10
130.40
138.99
A
A
A
NE1
CE2
CZ2
TRP
TRP
TRP
137
137
137
N
1
-6.15
1.00
110.10
103.95
A
A
A
CG
CD1
NE1
TRP
TRP
TRP
141
141
141
N
1
8.63
0.90
109.00
117.63
A
A
A
CD1
NE1
CE2
TRP
TRP
TRP
141
141
141
N
1
8.15
1.10
130.40
138.55
A
A
A
NE1
CE2
CZ2
TRP
TRP
TRP
141
141
141
N
1
-6.22
1.00
107.30
101.08
A
A
A
NE1
CE2
CD2
TRP
TRP
TRP
141
141
141
N
1
-4.26
0.50
120.30
116.04
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
164
164
164
N
1
-18.37
2.70
111.00
92.63
A
A
A
N
CA
C
LEU
LEU
LEU
200
200
200
N
1
-5.44
0.90
118.30
112.86
A
A
A
CB
CG
OD2
ASP
ASP
ASP
213
213
213
N
1
-3.30
0.50
120.30
117.00
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
223
223
223
N
1
11.19
1.10
114.20
125.39
A
A
A
CA
CB
SG
CYS
CYS
CYS
244
244
244
N
1
8.85
1.10
114.20
123.05
A
A
A
CA
CB
SG
CYS
CYS
CYS
287
287
287
N
1
-6.50
1.00
110.10
103.60
A
A
A
CG
CD1
NE1
TRP
TRP
TRP
294
294
294
N
1
8.80
0.90
109.00
117.80
A
A
A
CD1
NE1
CE2
TRP
TRP
TRP
294
294
294
N
1
7.50
1.10
130.40
137.90
A
A
A
NE1
CE2
CZ2
TRP
TRP
TRP
294
294
294
N
1
-6.37
1.00
107.30
100.93
A
A
A
NE1
CE2
CD2
TRP
TRP
TRP
294
294
294
N
1
-3.11
0.50
120.30
117.19
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
313
313
313
N
1
7.61
0.90
109.00
116.61
A
A
A
CD1
NE1
CE2
TRP
TRP
TRP
315
315
315
N
1
8.33
1.10
130.40
138.73
A
A
A
NE1
CE2
CZ2
TRP
TRP
TRP
315
315
315
N
1
-6.06
1.00
107.30
101.24
A
A
A
NE1
CE2
CD2
TRP
TRP
TRP
315
315
315
N
1
-3.68
0.50
120.30
116.62
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
353
353
353
N
1
-13.37
2.00
110.40
97.03
A
A
A
CB
CA
C
GLU
GLU
GLU
358
358
358
B
N
1
17.30
2.70
111.00
128.30
B
B
B
N
CA
C
SER
SER
SER
30
30
30
N
1
-6.57
1.00
110.10
103.53
B
B
B
CG
CD1
NE1
TRP
TRP
TRP
137
137
137
N
1
7.65
0.90
109.00
116.65
B
B
B
CD1
NE1
CE2
TRP
TRP
TRP
137
137
137
N
1
7.39
1.10
130.40
137.79
B
B
B
NE1
CE2
CZ2
TRP
TRP
TRP
137
137
137
N
1
-6.91
1.00
110.10
103.19
B
B
B
CG
CD1
NE1
TRP
TRP
TRP
141
141
141
N
1
8.28
0.90
109.00
117.28
B
B
B
CD1
NE1
CE2
TRP
TRP
TRP
141
141
141
N
1
8.96
1.10
130.40
139.36
B
B
B
NE1
CE2
CZ2
TRP
TRP
TRP
141
141
141
N
1
-6.24
1.00
107.30
101.06
B
B
B
NE1
CE2
CD2
TRP
TRP
TRP
141
141
141
N
1
11.89
1.10
114.20
126.09
B
B
B
CA
CB
SG
CYS
CYS
CYS
244
244
244
N
1
-5.93
0.90
118.30
112.37
B
B
B
CB
CG
OD2
ASP
ASP
ASP
267
267
267
N
1
6.96
1.10
114.20
121.16
B
B
B
CA
CB
SG
CYS
CYS
CYS
287
287
287
N
1
-6.83
1.00
110.10
103.27
B
B
B
CG
CD1
NE1
TRP
TRP
TRP
294
294
294
N
1
8.40
0.90
109.00
117.40
B
B
B
CD1
NE1
CE2
TRP
TRP
TRP
294
294
294
N
1
8.39
1.10
130.40
138.79
B
B
B
NE1
CE2
CZ2
TRP
TRP
TRP
294
294
294
N
1
-6.06
1.00
107.30
101.24
B
B
B
NE1
CE2
CD2
TRP
TRP
TRP
294
294
294
N
1
-19.09
2.70
111.00
91.91
B
B
B
N
CA
C
ASN
ASN
ASN
307
307
307
N
1
-3.24
0.50
120.30
117.06
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
313
313
313
N
1
7.20
0.90
109.00
116.20
B
B
B
CD1
NE1
CE2
TRP
TRP
TRP
315
315
315
N
1
7.34
1.10
130.40
137.74
B
B
B
NE1
CE2
CZ2
TRP
TRP
TRP
315
315
315
N
1
-5.58
0.90
118.30
112.72
B
B
B
CB
CG
OD2
ASP
ASP
ASP
333
333
333
N
1
-3.26
0.50
120.30
117.04
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
353
353
353
N
1
A
A
NE2
CD2
HIS
HIS
51
51
-0.066
0.011
1.373
1.307
N
1
A
A
NE2
CD2
HIS
HIS
142
142
-0.070
0.011
1.373
1.303
N
1
A
A
NE2
CD2
HIS
HIS
180
180
-0.074
0.011
1.373
1.299
N
1
A
A
CD
OE2
GLU
GLU
238
238
0.110
0.011
1.252
1.362
N
1
B
B
CG
CD2
HIS
HIS
142
142
0.055
0.009
1.354
1.409
N
1
B
B
NE2
CD2
HIS
HIS
142
142
-0.067
0.011
1.373
1.306
N
1
B
B
NE2
CD2
HIS
HIS
180
180
-0.072
0.011
1.373
1.301
N
1
B
B
CD
OE2
GLU
GLU
238
238
0.111
0.011
1.252
1.363
N
1
A
B
O
H1
VAL
HOH
376
472
1.50
1_555
2_564
1
A
CYS
28
-87.32
38.95
1
A
ASP
29
-151.39
31.78
1
A
SER
30
-109.64
-86.79
1
A
LEU
31
-13.64
121.25
1
A
ALA
32
-9.22
-39.13
1
A
LYS
36
-108.65
62.60
1
A
SER
83
-31.68
-26.86
1
A
ILE
108
-23.23
-45.83
1
A
ASP
128
-83.51
42.28
1
A
PHE
152
39.38
29.20
1
A
ASN
156
-106.96
74.16
1
A
SER
190
-77.00
27.11
1
A
PRO
205
-44.69
101.87
1
A
TYR
224
83.04
4.10
1
A
PHE
255
-154.96
-25.09
1
A
ASN
256
35.28
79.81
1
A
ALA
266
-95.31
55.74
1
A
ASP
272
-38.48
135.56
1
A
CYS
275
38.66
62.44
1
A
SER
276
-124.07
-52.32
1
A
GLN
295
76.52
31.89
1
A
TYR
306
-91.76
32.81
1
A
LEU
308
-21.05
-74.22
1
A
PRO
332
-50.91
173.70
1
B
CYS
28
-57.27
-7.14
1
B
SER
30
-121.37
-72.84
1
B
LEU
31
2.21
88.04
1
B
ALA
32
28.46
-62.59
1
B
LYS
36
-47.58
32.87
1
B
SER
83
-46.53
-17.08
1
B
THR
105
-124.93
-149.56
1
B
ILE
108
-22.11
-46.19
1
B
TRP
141
-90.61
58.39
1
B
HIS
142
-58.95
6.23
1
B
PHE
152
71.66
-1.83
1
B
ARG
166
-67.45
11.57
1
B
LEU
179
-28.19
-37.40
1
B
PRO
205
-37.74
102.92
1
B
ASP
237
-22.76
-39.30
1
B
ASN
256
38.38
74.54
1
B
ALA
266
-85.44
45.14
1
B
ASP
272
-4.36
125.43
1
B
CYS
275
31.73
47.56
1
B
PRO
332
-48.97
172.68
1
B
TYR
344
9.44
56.99
1
B
PRO
350
-49.67
168.98
1
B
LEU
373
-77.57
23.14
0.304
0.237
2.20
7.00
1872
37437
34275
5.0
90.5
RANDOM
1
THROUGHOUT
1.1
0
MOLECULAR REPLACEMENT
PDB ENTRY 1T64
RESIDUAL
2.20
7.00
733
11641
110
0
10798
0.018
3.8
0.404
0.389
2.30
202
3650
10
2.20
27.74
1VKG
39198
37725
0.0
0
0.092
0.092
1
6.4
2.8
96.24
0.342
2.2
2.3
1.7
4695
0.342
80.7
data collection
Crystal
data reduction
Crystal
model building
X-sight
refinement
X-PLOR
3.851
data scaling
CrystalClear
(MSC/RIGAKU)
phasing
X-SIGHT
refinement
X-PLOR
3.851
Crystal Structure of Human HDAC8 complexed with CRA-19156
1
N
N
1
N
N
2
N
N
3
N
N
4
N
N
2
N
N
3
N
N
4
N
N
5
N
N
5
N
N
A
SER
21
A
SER
21
HELX_P
A
CYS
28
A
CYS
28
1
1
8
A
LYS
36
A
LYS
36
HELX_P
A
TYR
48
A
TYR
48
1
2
13
A
ALA
49
A
ALA
49
HELX_P
A
MET
54
A
MET
54
5
3
6
A
SER
63
A
SER
63
HELX_P
A
ALA
68
A
ALA
68
1
4
6
A
THR
72
A
THR
72
HELX_P
A
GLY
86
A
GLY
86
1
5
15
A
GLY
107
A
GLY
107
HELX_P
A
ASP
128
A
ASP
128
1
6
22
A
ASN
156
A
ASN
156
HELX_P
A
ARG
167
A
ARG
167
1
7
12
A
GLY
182
A
GLY
182
HELX_P
A
PHE
189
A
PHE
189
1
8
8
A
GLN
236
A
GLN
236
HELX_P
A
ALA
254
A
ALA
254
1
9
19
A
THR
280
A
THR
280
HELX_P
A
GLN
293
A
GLN
293
1
10
14
A
ASN
307
A
ASN
307
HELX_P
A
GLY
324
A
GLY
324
1
11
18
A
PHE
336
A
PHE
336
HELX_P
A
TYR
340
A
TYR
340
5
12
5
A
GLU
358
A
GLU
358
HELX_P
A
LYS
374
A
LYS
374
1
13
17
B
SER
21
B
SER
21
HELX_P
B
ASP
29
B
ASP
29
1
14
9
B
LYS
36
B
LYS
36
HELX_P
B
TYR
48
B
TYR
48
1
15
13
B
LEU
50
B
LEU
50
HELX_P
B
MET
54
B
MET
54
5
16
5
B
SER
63
B
SER
63
HELX_P
B
THR
69
B
THR
69
1
17
7
B
THR
72
B
THR
72
HELX_P
B
GLY
86
B
GLY
86
1
18
15
B
GLY
107
B
GLY
107
HELX_P
B
ASP
128
B
ASP
128
1
19
22
B
ASN
156
B
ASN
156
HELX_P
B
ARG
166
B
ARG
166
1
20
11
B
ASP
183
B
ASP
183
HELX_P
B
SER
190
B
SER
190
1
21
8
B
LEU
219
B
LEU
219
HELX_P
B
ARG
223
B
ARG
223
5
22
5
B
GLN
236
B
GLN
236
HELX_P
B
ASN
256
B
ASN
256
1
23
21
B
THR
280
B
THR
280
HELX_P
B
TRP
294
B
TRP
294
1
24
15
B
ASN
307
B
ASN
307
HELX_P
B
GLY
324
B
GLY
324
1
25
18
B
PHE
337
B
PHE
337
HELX_P
B
GLY
341
B
GLY
341
5
26
5
B
GLU
358
B
GLU
358
HELX_P
B
LEU
373
B
LEU
373
1
27
16
disulf
2.060
A
CYS
244
A
SG
CYS
244
1_555
A
CYS
287
A
SG
CYS
287
1_555
disulf
2.070
B
CYS
244
B
SG
CYS
244
1_555
B
CYS
287
B
SG
CYS
287
1_555
metalc
2.497
A
LEU
177
A
O
LEU
177
1_555
A
NA
401
D
NA
NA
1_555
metalc
2.712
A
ASP
178
A
OD1
ASP
178
1_555
A
ZN
400
C
ZN
ZN
1_555
metalc
2.034
A
ASP
178
A
OD2
ASP
178
1_555
A
ZN
400
C
ZN
ZN
1_555
metalc
2.884
A
ASP
178
A
O
ASP
178
1_555
A
NA
401
D
NA
NA
1_555
metalc
2.000
A
HIS
180
A
ND1
HIS
180
1_555
A
ZN
400
C
ZN
ZN
1_555
metalc
2.953
A
LEU
200
A
O
LEU
200
1_555
A
NA
401
D
NA
NA
1_555
metalc
2.461
A
TYR
240
A
OH
TYR
240
1_555
A
NA
401
D
NA
NA
1_555
metalc
2.132
A
ASP
267
A
OD2
ASP
267
1_555
A
ZN
400
C
ZN
ZN
1_555
metalc
1.803
A
ZN
400
C
ZN
ZN
1_555
A
CRI
402
E
O
CRI
1_555
metalc
2.680
B
ASP
176
B
O
ASP
176
1_555
B
NA
401
G
NA
NA
1_555
metalc
2.638
B
ASP
176
B
OD1
ASP
176
1_555
B
NA
401
G
NA
NA
1_555
metalc
2.060
B
ASP
178
B
OD2
ASP
178
1_555
B
ZN
400
F
ZN
ZN
1_555
metalc
2.446
B
ASP
178
B
O
ASP
178
1_555
B
NA
401
G
NA
NA
1_555
metalc
2.275
B
HIS
180
B
ND1
HIS
180
1_555
B
ZN
400
F
ZN
ZN
1_555
metalc
2.603
B
HIS
180
B
O
HIS
180
1_555
B
NA
401
G
NA
NA
1_555
metalc
2.325
B
LEU
200
B
O
LEU
200
1_555
B
NA
401
G
NA
NA
1_555
metalc
2.114
B
ASP
267
B
OD2
ASP
267
1_555
B
ZN
400
F
ZN
ZN
1_555
metalc
1.966
B
ZN
400
F
ZN
ZN
1_555
B
CRI
402
H
OH
CRI
1_555
metalc
2.605
B
ZN
400
F
ZN
ZN
1_555
B
CRI
402
H
N
CRI
1_555
metalc
1.905
B
ZN
400
F
ZN
ZN
1_555
B
CRI
402
H
O
CRI
1_555
HYDROLASE
histone deacetylase, zinc hydrolase, hydrolase
A
GLY
341
A
GLY
341
1
A
PRO
342
A
PRO
342
-24.59
B
PHE
208
B
PHE
208
1
B
PRO
209
B
PRO
209
-14.56
B
GLY
341
B
GLY
341
1
B
PRO
342
B
PRO
342
11.66
HDAC8_HUMAN
UNP
1
1
Q9BY41
MEEPEEPADSGQSLVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQ
KVSQEGDDDHPDSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVL
GILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKY
YQICESVLKEVYQAFNPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTG
VILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVV
1
377
1VKG
1
377
Q9BY41
A
1
1
377
1
377
1VKG
1
377
Q9BY41
B
1
1
377
8
2
8
parallel
parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
A
ARG
55
A
ARG
55
A
VAL
57
A
VAL
57
A
VAL
17
A
VAL
17
A
ILE
19
A
ILE
19
A
VAL
133
A
VAL
133
A
ASN
136
A
ASN
136
A
ALA
297
A
ALA
297
A
LEU
301
A
LEU
301
A
ALA
259
A
ALA
259
A
GLN
263
A
GLN
263
A
ILE
172
A
ILE
172
A
ASP
176
A
ASP
176
A
VAL
195
A
VAL
195
A
LYS
202
A
LYS
202
A
SER
226
A
SER
226
A
ILE
231
A
ILE
231
A
GLY
218
A
GLY
218
A
LEU
219
A
LEU
219
A
GLY
222
A
GLY
222
A
ARG
223
A
ARG
223
B
ARG
55
B
ARG
55
B
VAL
57
B
VAL
57
B
VAL
17
B
VAL
17
B
ILE
19
B
ILE
19
B
VAL
133
B
VAL
133
B
ASN
136
B
ASN
136
B
ALA
297
B
ALA
297
B
LEU
301
B
LEU
301
B
ALA
259
B
ALA
259
B
GLN
263
B
GLN
263
B
ILE
172
B
ILE
172
B
ASP
176
B
ASP
176
B
VAL
195
B
VAL
195
B
LYS
202
B
LYS
202
B
SER
226
B
SER
226
B
ILE
231
B
ILE
231
BINDING SITE FOR RESIDUE ZN A 400
A
ZN
400
Software
4
BINDING SITE FOR RESIDUE ZN B 400
B
ZN
400
Software
4
BINDING SITE FOR RESIDUE NA B 401
B
NA
401
Software
6
BINDING SITE FOR RESIDUE NA A 401
A
NA
401
Software
5
BINDING SITE FOR RESIDUE CRI A 402
A
CRI
402
Software
15
BINDING SITE FOR RESIDUE CRI B 402
B
CRI
402
Software
11
A
ASP
178
A
ASP
178
4
1_555
A
HIS
180
A
HIS
180
4
1_555
A
ASP
267
A
ASP
267
4
1_555
A
CRI
402
E
CRI
4
1_555
B
ASP
178
B
ASP
178
4
1_555
B
HIS
180
B
HIS
180
4
1_555
B
ASP
267
B
ASP
267
4
1_555
B
CRI
402
H
CRI
4
1_555
B
ASP
176
B
ASP
176
6
1_555
B
ASP
178
B
ASP
178
6
1_555
B
HIS
180
B
HIS
180
6
1_555
B
SER
199
B
SER
199
6
1_555
B
LEU
200
B
LEU
200
6
1_555
B
HIS
201
B
HIS
201
6
1_555
A
LEU
177
A
LEU
177
5
1_555
A
ASP
178
A
ASP
178
5
1_555
A
LEU
200
A
LEU
200
5
1_555
A
TYR
240
A
TYR
240
5
1_555
A
THR
268
A
THR
268
5
1_555
A
HIS
142
A
HIS
142
15
1_555
A
HIS
143
A
HIS
143
15
1_555
A
PHE
152
A
PHE
152
15
1_555
A
ASP
178
A
ASP
178
15
1_555
A
HIS
180
A
HIS
180
15
1_555
A
PHE
208
A
PHE
208
15
1_555
A
ASP
267
A
ASP
267
15
1_555
A
TYR
306
A
TYR
306
15
1_555
A
ZN
400
C
ZN
15
1_555
A
HOH
478
I
HOH
15
1_555
B
PHE
152
B
PHE
152
15
1_555
B
PRO
273
B
PRO
273
15
1_555
B
MET
274
B
MET
274
15
1_555
B
TYR
306
B
TYR
306
15
1_555
B
CRI
402
H
CRI
15
1_555
A
PRO
273
A
PRO
273
11
1_555
A
CRI
402
E
CRI
11
1_555
B
HIS
142
B
HIS
142
11
1_555
B
HIS
143
B
HIS
143
11
1_555
B
PHE
152
B
PHE
152
11
1_555
B
ASP
178
B
ASP
178
11
1_555
B
HIS
180
B
HIS
180
11
1_555
B
PHE
208
B
PHE
208
11
1_555
B
ASP
267
B
ASP
267
11
1_555
B
TYR
306
B
TYR
306
11
1_555
B
ZN
400
F
ZN
11
1_555
19
P 21 21 21