0.012539 0.000000 0.000000 0.000000 0.012539 0.000000 0.000000 0.000000 0.010427 0.00000 0.00000 0.00000 Joint Center for Structural Genomics (JCSG) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 16 90.00 90.00 90.00 79.749 79.749 95.909 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking Li 1 6.941 LITHIUM ION non-polymer C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking UNKNOWN LIGAND non-polymer C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 N C Y 128 N C Y 129 N N Y 130 N C Y 131 N C Y 132 N N N 133 N O N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N H N 146 N H N 147 N N N 148 S C N 149 N C N 150 N O N 151 S C N 152 N C N 153 N C N 154 N C N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N N N 170 S C N 171 N C N 172 N O N 173 N C N 174 N C N 175 N C N 176 N C N 177 N O N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N LI N 192 N N N 193 S C N 194 N C N 195 N O N 196 N C N 197 N C N 198 N C N 199 N C N 200 N N N 201 N O N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N N N 218 S C N 219 N C N 220 N O N 221 N C N 222 N C N 223 N S N 224 N C N 225 N O N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N N N 238 S C N 239 N C N 240 N O N 241 N O N 242 N C N 243 N C N 244 N SE N 245 N C N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N N N 258 S C N 259 N C N 260 N O N 261 N C Y 262 N C Y 263 N C Y 264 N C Y 265 N C Y 266 N C Y 267 N C N 268 N O N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N N N 281 S C N 282 N C N 283 N O N 284 N C N 285 N O N 286 N O N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N N N 295 S C N 296 N C N 297 N O N 298 R C N 299 N O N 300 N C N 301 N O N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N N N 312 S C N 313 N C N 314 N O N 315 N C Y 316 N C Y 317 N C Y 318 N C Y 319 N N Y 320 N C Y 321 N C Y 322 N C Y 323 N C Y 324 N C N 325 N O N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N N N 339 S C N 340 N C N 341 N O N 342 N C Y 343 N C Y 344 N C Y 345 N C Y 346 N C Y 347 N C Y 348 N C N 349 N O N 350 N O N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N N N 363 S C N 364 N C N 365 N O N 366 N C N 367 N C N 368 N C N 369 N O N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing Y 127 N sing Y 128 N doub Y 129 N doub N 130 N sing Y 131 N sing N 132 N sing Y 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N doub N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N doub N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N doub N 250 N sing N 251 N sing N 252 N sing N 253 N sing Y 254 N doub Y 255 N sing Y 256 N sing N 257 N sing Y 258 N doub N 259 N sing Y 260 N doub N 261 N sing Y 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N doub N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N doub N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N doub N 302 N sing N 303 N sing N 304 N sing N 305 N sing Y 306 N doub Y 307 N sing Y 308 N sing N 309 N sing Y 310 N doub Y 311 N sing Y 312 N sing N 313 N sing Y 314 N sing Y 315 N doub N 316 N sing Y 317 N doub N 318 N sing Y 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N doub N 330 N sing N 331 N sing N 332 N sing N 333 N sing Y 334 N doub Y 335 N sing Y 336 N sing N 337 N sing Y 338 N doub N 339 N sing Y 340 N doub N 341 N sing Y 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N doub N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing To be published 0353 Crystal structure of MazG nucleotide pyrophosphohydrolase (13816655) from Sulfolobus solfataricus at 1.46 A resolution 10.2210/pdb1vmg/pdb pdb_00001vmg 100 1 CCD 2004-09-18 ADSC Double Crystal Si(111) MAD M x-ray 1 0.979834 1.0 0.979694 1.0 1.020035 1.0 8.3.1 ALS 0.979834 0.979834,0.979694,1.020035 SYNCHROTRON ALS BEAMLINE 8.3.1 11182.214 Hypothetical protein SSO3215 3.6.1.- 1 man polymer 6.941 LITHIUM ION 1 syn non-polymer UNKNOWN LIGAND 1 syn non-polymer 18.015 water 106 nat water no yes MGSDKIHHHHHH(MSE)DLELKELQSK(MSE)KE(MSE)YFEKDSQRGIYATFTWLVEEVGELAEALLSNNLDSIQEELA DVIAWTVSIANLEGIDIEEALKKKYKL MGSDKIHHHHHHMDLELKELQSKMKEMYFEKDSQRGIYATFTWLVEEVGELAEALLSNNLDSIQEELADVIAWTVSIANL EGIDIEEALKKKYKL A 358109 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Sulfolobus Sulfolobus solfataricus P2 Escherichia sample 273057 Sulfolobus solfataricus 562 Escherichia coli Plasmid 1 3.30 62.40 VAPOR DIFFUSION,SITTING DROP,NANODROP 7.5 1.5M Li2SO4, 0.1M HEPES pH 7.5, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K 277 Joint Center for Structural Genomics JCSG PSI, Protein Structure Initiative chem_comp_atom chem_comp_bond database_2 pdbx_struct_conn_angle struct_conn struct_ref_seq_dif struct_site repository Initial release Version format compliance Advisory Derived calculations Source and taxonomy Version format compliance Data collection Database references Derived calculations 1 0 2004-10-05 1 1 2008-04-26 1 2 2011-07-13 1 3 2023-12-27 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y RCSB Y RCSB 2004-09-24 REL REL LI LITHIUM ION UNL UNKNOWN LIGAND HOH water LI 1 2 LI LI 84 A UNL 2 3 UNL UNL 85 A HOH 3 4 HOH HOH 86 A HOH 4 4 HOH HOH 87 A HOH 5 4 HOH HOH 88 A HOH 6 4 HOH HOH 89 A HOH 7 4 HOH HOH 90 A HOH 8 4 HOH HOH 91 A HOH 9 4 HOH HOH 92 A HOH 10 4 HOH HOH 93 A HOH 11 4 HOH HOH 94 A HOH 12 4 HOH HOH 95 A HOH 13 4 HOH HOH 96 A HOH 14 4 HOH HOH 97 A HOH 15 4 HOH HOH 98 A HOH 16 4 HOH HOH 99 A HOH 17 4 HOH HOH 100 A HOH 18 4 HOH HOH 101 A HOH 19 4 HOH HOH 102 A HOH 20 4 HOH HOH 103 A HOH 21 4 HOH HOH 104 A HOH 22 4 HOH HOH 105 A HOH 23 4 HOH HOH 106 A HOH 24 4 HOH HOH 107 A HOH 25 4 HOH HOH 108 A HOH 26 4 HOH HOH 109 A HOH 27 4 HOH HOH 110 A HOH 28 4 HOH HOH 111 A HOH 29 4 HOH HOH 112 A HOH 30 4 HOH HOH 113 A HOH 31 4 HOH HOH 114 A HOH 32 4 HOH HOH 115 A HOH 33 4 HOH HOH 116 A HOH 34 4 HOH HOH 117 A HOH 35 4 HOH HOH 118 A HOH 36 4 HOH HOH 119 A HOH 37 4 HOH HOH 120 A HOH 38 4 HOH HOH 121 A HOH 39 4 HOH HOH 122 A HOH 40 4 HOH HOH 123 A HOH 41 4 HOH HOH 124 A HOH 42 4 HOH HOH 125 A HOH 43 4 HOH HOH 126 A HOH 44 4 HOH HOH 127 A HOH 45 4 HOH HOH 128 A HOH 46 4 HOH HOH 129 A HOH 47 4 HOH HOH 130 A HOH 48 4 HOH HOH 131 A HOH 49 4 HOH HOH 132 A HOH 50 4 HOH HOH 133 A HOH 51 4 HOH HOH 134 A HOH 52 4 HOH HOH 135 A HOH 53 4 HOH HOH 136 A HOH 54 4 HOH HOH 137 A HOH 55 4 HOH HOH 138 A HOH 56 4 HOH HOH 139 A HOH 57 4 HOH HOH 140 A HOH 58 4 HOH HOH 141 A HOH 59 4 HOH HOH 142 A HOH 60 4 HOH HOH 143 A HOH 61 4 HOH HOH 144 A HOH 62 4 HOH HOH 145 A HOH 63 4 HOH HOH 146 A HOH 64 4 HOH HOH 147 A HOH 65 4 HOH HOH 148 A HOH 66 4 HOH HOH 149 A HOH 67 4 HOH HOH 150 A HOH 68 4 HOH HOH 151 A HOH 69 4 HOH HOH 152 A HOH 70 4 HOH HOH 153 A HOH 71 4 HOH HOH 154 A HOH 72 4 HOH HOH 155 A HOH 73 4 HOH HOH 156 A HOH 74 4 HOH HOH 157 A HOH 75 4 HOH HOH 158 A HOH 76 4 HOH HOH 159 A HOH 77 4 HOH HOH 160 A HOH 78 4 HOH HOH 161 A HOH 79 4 HOH HOH 162 A HOH 80 4 HOH HOH 163 A HOH 81 4 HOH HOH 164 A HOH 82 4 HOH HOH 165 A HOH 83 4 HOH HOH 166 A HOH 84 4 HOH HOH 167 A HOH 85 4 HOH HOH 168 A HOH 86 4 HOH HOH 169 A HOH 87 4 HOH HOH 170 A HOH 88 4 HOH HOH 171 A HOH 89 4 HOH HOH 172 A HOH 90 4 HOH HOH 173 A HOH 91 4 HOH HOH 174 A HOH 92 4 HOH HOH 175 A HOH 93 4 HOH HOH 176 A HOH 94 4 HOH HOH 177 A HOH 95 4 HOH HOH 178 A HOH 96 4 HOH HOH 179 A HOH 97 4 HOH HOH 180 A HOH 98 4 HOH HOH 181 A HOH 99 4 HOH HOH 182 A HOH 100 4 HOH HOH 183 A HOH 101 4 HOH HOH 184 A HOH 102 4 HOH HOH 185 A HOH 103 4 HOH HOH 186 A HOH 104 4 HOH HOH 187 A HOH 105 4 HOH HOH 188 A HOH 106 4 HOH HOH 189 A HOH 107 4 HOH HOH 190 A HOH 108 4 HOH HOH 191 A n 1 -11 A n 2 -10 A n 3 -9 A n 4 -8 A n 5 -7 A n 6 -6 A n 7 -5 A n 8 -4 A n 9 -3 A n 10 -2 A n 11 -1 A n 12 0 A MSE 1 n 13 MSE 1 A ASP 2 n 14 ASP 2 A LEU 3 n 15 LEU 3 A GLU 4 n 16 GLU 4 A LEU 5 n 17 LEU 5 A LYS 6 n 18 LYS 6 A GLU 7 n 19 GLU 7 A LEU 8 n 20 LEU 8 A GLN 9 n 21 GLN 9 A SER 10 n 22 SER 10 A LYS 11 n 23 LYS 11 A MSE 12 n 24 MSE 12 A LYS 13 n 25 LYS 13 A GLU 14 n 26 GLU 14 A MSE 15 n 27 MSE 15 A TYR 16 n 28 TYR 16 A PHE 17 n 29 PHE 17 A GLU 18 n 30 GLU 18 A LYS 19 n 31 LYS 19 A ASP 20 n 32 ASP 20 A SER 21 n 33 SER 21 A GLN 22 n 34 GLN 22 A ARG 23 n 35 ARG 23 A GLY 24 n 36 GLY 24 A ILE 25 n 37 ILE 25 A TYR 26 n 38 TYR 26 A ALA 27 n 39 ALA 27 A THR 28 n 40 THR 28 A PHE 29 n 41 PHE 29 A THR 30 n 42 THR 30 A TRP 31 n 43 TRP 31 A LEU 32 n 44 LEU 32 A VAL 33 n 45 VAL 33 A GLU 34 n 46 GLU 34 A GLU 35 n 47 GLU 35 A VAL 36 n 48 VAL 36 A GLY 37 n 49 GLY 37 A GLU 38 n 50 GLU 38 A LEU 39 n 51 LEU 39 A ALA 40 n 52 ALA 40 A GLU 41 n 53 GLU 41 A ALA 42 n 54 ALA 42 A LEU 43 n 55 LEU 43 A LEU 44 n 56 LEU 44 A SER 45 n 57 SER 45 A ASN 46 n 58 ASN 46 A ASN 47 n 59 ASN 47 A LEU 48 n 60 LEU 48 A ASP 49 n 61 ASP 49 A SER 50 n 62 SER 50 A ILE 51 n 63 ILE 51 A GLN 52 n 64 GLN 52 A GLU 53 n 65 GLU 53 A GLU 54 n 66 GLU 54 A LEU 55 n 67 LEU 55 A ALA 56 n 68 ALA 56 A ASP 57 n 69 ASP 57 A VAL 58 n 70 VAL 58 A ILE 59 n 71 ILE 59 A ALA 60 n 72 ALA 60 A TRP 61 n 73 TRP 61 A THR 62 n 74 THR 62 A VAL 63 n 75 VAL 63 A SER 64 n 76 SER 64 A ILE 65 n 77 ILE 65 A ALA 66 n 78 ALA 66 A ASN 67 n 79 ASN 67 A LEU 68 n 80 LEU 68 A GLU 69 n 81 GLU 69 A GLY 70 n 82 GLY 70 A ILE 71 n 83 ILE 71 A ASP 72 n 84 ASP 72 A ILE 73 n 85 ILE 73 A GLU 74 n 86 GLU 74 A GLU 75 n 87 GLU 75 A ALA 76 n 88 ALA 76 A LEU 77 n 89 LEU 77 A LYS 78 n 90 LYS 78 A LYS 79 n 91 LYS 79 A LYS 80 n 92 LYS 80 A TYR 81 n 93 TYR 81 A LYS 82 n 94 LYS 82 A LEU 83 n 95 LEU 83 A 0.4738 -0.2119 0.0800 0.7849 0.3208 0.5075 0.0045 0.0030 -0.0257 0.0682 -0.0261 0.0546 -0.0086 -0.0386 0.0216 -0.0081 0.0004 -0.0002 -0.0199 -0.0041 -0.0211 refined 68.5390 7.8450 3.9150 X-RAY DIFFRACTION A 1 A 13 A 83 A 95 X-RAY DIFFRACTION 1 ALL author_and_software_defined_assembly PISA 2 dimeric software_defined_assembly PISA,PQS 4 tetrameric 5530 -47 7710 13600 -126 12880 A GLU 35 A OE1 GLU 47 1_555 A LI 84 B LI LI 1_555 A GLU 54 A OE1 GLU 66 1_555 103.2 A GLU 35 A OE1 GLU 47 1_555 A LI 84 B LI LI 1_555 A ASP 57 A OD2 ASP 69 1_555 100.8 A GLU 54 A OE1 GLU 66 1_555 A LI 84 B LI LI 1_555 A ASP 57 A OD2 ASP 69 1_555 101.7 A GLU 35 A OE1 GLU 47 1_555 A LI 84 B LI LI 1_555 A HOH 108 D O HOH 1_555 121.1 A GLU 54 A OE1 GLU 66 1_555 A LI 84 B LI LI 1_555 A HOH 108 D O HOH 1_555 117.2 A ASP 57 A OD2 ASP 69 1_555 A LI 84 B LI LI 1_555 A HOH 108 D O HOH 1_555 110.0 A MSE 1 SELENOMETHIONINE A MSE 13 MET A MSE 12 SELENOMETHIONINE A MSE 24 MET A MSE 15 SELENOMETHIONINE A MSE 27 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 8_665 -y+1,-x+1,-z crystal symmetry operation 79.7490000000 79.7490000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 10_755 -x+2,-y,z crystal symmetry operation 159.4980000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 15_645 y+1,x-1,-z crystal symmetry operation 79.7490000000 -79.7490000000 0.0000000000 1 A HOH 92 D HOH 1 A CG MSE 1 A CG MSE 13 1 Y 1 A CE MSE 1 A CE MSE 13 1 Y 1 A CD GLU 7 A CD GLU 19 1 Y 1 A OE1 GLU 7 A OE1 GLU 19 1 Y 1 A OE2 GLU 7 A OE2 GLU 19 1 Y 1 A CD GLU 18 A CD GLU 30 1 Y 1 A OE1 GLU 18 A OE1 GLU 30 1 Y 1 A OE2 GLU 18 A OE2 GLU 30 1 Y 1 A CD LYS 19 A CD LYS 31 1 Y 1 A CE LYS 19 A CE LYS 31 1 Y 1 A NZ LYS 19 A NZ LYS 31 1 Y 1 A CD GLN 22 A CD GLN 34 1 Y 1 A OE1 GLN 22 A OE1 GLN 34 1 Y 1 A NE2 GLN 22 A NE2 GLN 34 1 Y 1 A CD LYS 82 A CD LYS 94 1 Y 1 A CE LYS 82 A CE LYS 94 1 Y 1 A NZ LYS 82 A NZ LYS 94 1 Y 1 A MET -11 A MET 1 1 Y 1 A GLY -10 A GLY 2 1 Y 1 A SER -9 A SER 3 1 Y 1 A ASP -8 A ASP 4 1 Y 1 A LYS -7 A LYS 5 1 Y 1 A ILE -6 A ILE 6 1 Y 1 A HIS -5 A HIS 7 1 Y 1 A HIS -4 A HIS 8 1 Y 1 A HIS -3 A HIS 9 1 Y 1 A HIS -2 A HIS 10 1 Y 1 A HIS -1 A HIS 11 1 Y 1 A HIS 0 A HIS 12 1 Y 1 A A O O HOH HOH 129 173 2.10 1 A A OE1 O GLU HOH 34 145 2.15 B 14.062 -0.19 0.00 0.00 -0.19 0.00 0.38 0.976 0.975 1. HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 2. AN UNKNOWN ENTITY BETWEEN TYR 16 AND TRP 61 WAS AS UNK, UNKNOWN LIGAND. THE DENSITY LOOKS SIMILAR TO A GUANINE BASE. 3. THERE ARE ADDITIONAL UNEXPLAINED DENSITIES NEAR ARG 23, TRP 31, TRP 61. IT MAY BE RELATED TO UNK, HOWEVER, DENSITY IS TOO FRAGMENTED TO IDENTIFY OR MODEL. 4. A LI ION WAS TENATIVELY MODELLED ACCORDING TO THE ENVIROMENT. AND ITS PRESENCE IN THE CRYSTALLIZATION BUFFER. 0.14633 0.14178 0.14201 1.46 25.62 1288 24059 5.1 93.34 1.453 0.027 RANDOM LIKELY RESIDUAL 1 THROUGHOUT MAD 0.043 0.041 0.80 0.80 1.20 MAXIMUM LIKELIHOOD WITH PHASES BABINET MODEL WITH MASK 1.46 25.62 106 771 10 0 655 0.012 0.022 715 0.001 0.020 695 1.235 1.988 971 0.800 3.000 1625 4.933 5.000 82 35.014 27.273 33 12.092 15.000 152 14.745 15.000 1 0.076 0.200 125 0.005 0.020 741 0.001 0.020 118 0.253 0.200 171 0.149 0.200 624 0.084 0.200 387 0.381 0.200 77 0.115 0.200 8 0.133 0.200 59 0.177 0.200 25 1.903 3.000 444 0.318 3.000 171 2.371 5.000 708 4.279 8.000 320 5.367 11.000 263 0.183 0.200 360 0.204 0.200 3 0.276 0.256 1.498 37 656 20 5.34 35.07 23.08 1.460 25.62 1VMG 25360 0.044 1 19.6 5.9 93.3 1.46 1.54 2.2 2241 0.435 1 2.0 57.6 data scaling XDS data scaling SCALA 4.2) model building SHELX phasing autoSHARP refinement REFMAC (5.2.0005) data reduction XDS data scaling CCP4 (SCALA) phasing SHELX Crystal structure of MazG nucleotide pyrophosphohydrolase (13816655) from Sulfolobus solfataricus at 1.46 A resolution 1 N N 2 N N 3 N N 4 N N A GLU 4 A GLU 16 HELX_P A GLY 24 A GLY 36 1 1 21 A GLY 24 A GLY 36 HELX_P A ASN 46 A ASN 58 1 2 23 A ASN 47 A ASN 59 HELX_P A GLY 70 A GLY 82 1 3 24 A ASP 72 A ASP 84 HELX_P A TYR 81 A TYR 93 1 4 10 covale 1.333 both A MSE 1 A C MSE 13 1_555 A ASP 2 A N ASP 14 1_555 covale 1.325 both A LYS 11 A C LYS 23 1_555 A MSE 12 A N MSE 24 1_555 covale 1.328 both A MSE 12 A C MSE 24 1_555 A LYS 13 A N LYS 25 1_555 covale 1.322 both A GLU 14 A C GLU 26 1_555 A MSE 15 A N MSE 27 1_555 covale 1.332 both A MSE 15 A C MSE 27 1_555 A TYR 16 A N TYR 28 1_555 metalc 1.901 A GLU 35 A OE1 GLU 47 1_555 A LI 84 B LI LI 1_555 metalc 1.988 A GLU 54 A OE1 GLU 66 1_555 A LI 84 B LI LI 1_555 metalc 2.116 A ASP 57 A OD2 ASP 69 1_555 A LI 84 B LI LI 1_555 metalc 1.674 A LI 84 B LI LI 1_555 A HOH 108 D O HOH 1_555 HYDROLASE 13816655, MazG nucleotide pyrophosphohydrolase, Structural Genomics, JCSG, Protein Structure Initiative, PSI, Joint Center for Structural Genomics, Hydrolase Q97U11_SULSO UNP 1 1 Q97U11 MDLELKELQSKMKEMYFEKDSQRGIYATFTWLVEEVGELAEALLSNNLDSIQEELADVIAWTVSIANLEGIDIEEALKKK YKL 1 83 1VMG -11 83 Q97U11 A 1 1 95 1 cloning artifact GLY -10 1VMG A Q97U11 UNP 2 1 cloning artifact SER -9 1VMG A Q97U11 UNP 3 1 cloning artifact ASP -8 1VMG A Q97U11 UNP 4 1 cloning artifact LYS -7 1VMG A Q97U11 UNP 5 1 cloning artifact ILE -6 1VMG A Q97U11 UNP 6 1 cloning artifact HIS -5 1VMG A Q97U11 UNP 7 1 cloning artifact HIS -4 1VMG A Q97U11 UNP 8 1 cloning artifact HIS -3 1VMG A Q97U11 UNP 9 1 cloning artifact HIS -2 1VMG A Q97U11 UNP 10 1 cloning artifact HIS -1 1VMG A Q97U11 UNP 11 1 cloning artifact HIS 0 1VMG A Q97U11 UNP 12 1 MET modified residue MSE 1 1VMG A Q97U11 UNP 1 13 1 MET modified residue MSE 12 1VMG A Q97U11 UNP 12 24 1 MET modified residue MSE 15 1VMG A Q97U11 UNP 15 27 BINDING SITE FOR RESIDUE LI A 84 A LI 84 Software 4 BINDING SITE FOR RESIDUE UNL A 85 A UNL 85 Software 9 A GLU 35 A GLU 47 4 1_555 A GLU 54 A GLU 66 4 1_555 A ASP 57 A ASP 69 4 1_555 A HOH 108 D HOH 4 1_555 A TYR 16 A TYR 28 9 1_555 A ASP 20 A ASP 32 9 1_555 A ARG 23 A ARG 35 9 1_555 A ALA 60 A ALA 72 9 1_555 A TRP 61 A TRP 73 9 1_555 A SER 64 A SER 76 9 1_555 A TYR 81 A TYR 93 9 8_665 A HOH 88 D HOH 9 1_555 A HOH 175 D HOH 9 1_555 98 I 41 2 2