0.018767
0.000000
0.000000
0.000000
0.007340
0.000000
0.000000
0.000000
0.012428
0.00000
0.00000
0.00000
Joint Center for Structural Genomics (JCSG)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
53.286
136.238
80.461
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
To be published
0353
Crystal structure of hypothetical protein (TM1631) from Thermotoga maritima at 2.20 A resolution
10.2210/pdb1vpq/pdb
pdb_00001vpq
100
1
100
1
1
flat mirror
CCD
2002-02-07
ADSC QUANTUM 315
Rosenbaum-Rock vertical focusing mirror
CCD
2003-11-15
APS
single crystal Si(311) bent monochromator
SINGLE WAVELENGTH
M
x-ray
1
Rosenbaum-Rock double-crystal monochromator
MAD
M
x-ray
1
1.033169
1.0
0.98036
1.0
0.98014
1.0
0.96427
1.0
BL11-1
SSRL
1.033169
SYNCHROTRON
SSRL BEAMLINE BL11-1
19-BM
APS
0.98036, 0.98014, 0.96427
SYNCHROTRON
APS BEAMLINE 19-BM
33229.594
hypothetical protein TM1631
1
man
polymer
96.063
SULFATE ION
3
syn
non-polymer
18.015
water
91
nat
water
no
no
MGSDKIHHHHHHMVYVGTSGFSFEDWKGVVYPEHLKPSQFLKYYWAVLGFRIVELNFTYYTQPSWRSFVQMLRKTPPDFY
FTVKTPGSVTHVLWKEGKDPKEDMENFTRQIEPLIEEQRLKMTLAQFPFSFKFSRKNVEYLEKLRESYPYELAVEFRHYS
WDREETYEFLRNHGITFVVVDEPKLPGLFPYRPITTTDYAYFRFHGRNERWFEAEGEERYDYLYSEEELKTLFEDVVELS
RRVKETYVFFNNCYKGQAAINALQFKKMLEERV
MGSDKIHHHHHHMVYVGTSGFSFEDWKGVVYPEHLKPSQFLKYYWAVLGFRIVELNFTYYTQPSWRSFVQMLRKTPPDFY
FTVKTPGSVTHVLWKEGKDPKEDMENFTRQIEPLIEEQRLKMTLAQFPFSFKFSRKNVEYLEKLRESYPYELAVEFRHYS
WDREETYEFLRNHGITFVVVDEPKLPGLFPYRPITTTDYAYFRFHGRNERWFEAEGEERYDYLYSEEELKTLFEDVVELS
RRVKETYVFFNNCYKGQAAINALQFKKMLEERV
A
283488
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Thermotoga
Thermotoga maritima
MSB8
Escherichia
sample
TM1631
243274
Thermotoga maritima
562
Escherichia coli
Plasmid
2
2.20
44.02
2.28
45.59
DATA FROM A SE-MET CONTAINING CRYSTAL IN SPACEGROUP P32 WAS USED FOR THE MAD PHASING EXPERIMENTS AT 2.8 ANGSTROMS RESOLUTION. THIS MAD STRUCTURE WAS USED AS A MOLECULAR REPLACEMENT MODEL TO PHASE THE STRUCTURE AT A RESOLUTION OF 2.2 ANGSTROMS IN THE C222(1) SPACEGROUP.
VAPOR DIFFUSION,SITTING DROP,NANODROP
9.5
1.26M (NH4)2SO4, 0.2M NaCl 0.1M CHES pH9.5 , VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K
277
VAPOR DIFFUSION,SITTING DROP,NANODROP
8.3
0.2M K3Citrate, 20.0% PEG-3350, No Buffer pH 8.3, VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K
277
Joint Center for Structural Genomics
JCSG
PSI, Protein Structure Initiative
database_2
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Advisory
Derived calculations
Source and taxonomy
Version format compliance
Database references
Derived calculations
1
0
2004-11-23
1
1
2008-04-26
1
2
2011-07-13
1
3
2023-01-25
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
RCSB
Y
RCSB
2004-11-16
REL
REL
SO4
SULFATE ION
HOH
water
SO4
1
2
SO4
SO4
262
A
SO4
2
2
SO4
SO4
263
A
SO4
3
2
SO4
SO4
264
A
HOH
4
3
HOH
HOH
265
A
HOH
5
3
HOH
HOH
266
A
HOH
6
3
HOH
HOH
267
A
HOH
7
3
HOH
HOH
268
A
HOH
8
3
HOH
HOH
269
A
HOH
9
3
HOH
HOH
270
A
HOH
10
3
HOH
HOH
271
A
HOH
11
3
HOH
HOH
272
A
HOH
12
3
HOH
HOH
273
A
HOH
13
3
HOH
HOH
274
A
HOH
14
3
HOH
HOH
275
A
HOH
15
3
HOH
HOH
276
A
HOH
16
3
HOH
HOH
277
A
HOH
17
3
HOH
HOH
278
A
HOH
18
3
HOH
HOH
279
A
HOH
19
3
HOH
HOH
280
A
HOH
20
3
HOH
HOH
281
A
HOH
21
3
HOH
HOH
282
A
HOH
22
3
HOH
HOH
283
A
HOH
23
3
HOH
HOH
284
A
HOH
24
3
HOH
HOH
285
A
HOH
25
3
HOH
HOH
286
A
HOH
26
3
HOH
HOH
287
A
HOH
27
3
HOH
HOH
288
A
HOH
28
3
HOH
HOH
289
A
HOH
29
3
HOH
HOH
290
A
HOH
30
3
HOH
HOH
291
A
HOH
31
3
HOH
HOH
292
A
HOH
32
3
HOH
HOH
293
A
HOH
33
3
HOH
HOH
294
A
HOH
34
3
HOH
HOH
295
A
HOH
35
3
HOH
HOH
296
A
HOH
36
3
HOH
HOH
297
A
HOH
37
3
HOH
HOH
298
A
HOH
38
3
HOH
HOH
299
A
HOH
39
3
HOH
HOH
300
A
HOH
40
3
HOH
HOH
301
A
HOH
41
3
HOH
HOH
302
A
HOH
42
3
HOH
HOH
303
A
HOH
43
3
HOH
HOH
304
A
HOH
44
3
HOH
HOH
305
A
HOH
45
3
HOH
HOH
306
A
HOH
46
3
HOH
HOH
307
A
HOH
47
3
HOH
HOH
308
A
HOH
48
3
HOH
HOH
309
A
HOH
49
3
HOH
HOH
310
A
HOH
50
3
HOH
HOH
311
A
HOH
51
3
HOH
HOH
312
A
HOH
52
3
HOH
HOH
313
A
HOH
53
3
HOH
HOH
314
A
HOH
54
3
HOH
HOH
315
A
HOH
55
3
HOH
HOH
316
A
HOH
56
3
HOH
HOH
317
A
HOH
57
3
HOH
HOH
318
A
HOH
58
3
HOH
HOH
319
A
HOH
59
3
HOH
HOH
320
A
HOH
60
3
HOH
HOH
321
A
HOH
61
3
HOH
HOH
322
A
HOH
62
3
HOH
HOH
323
A
HOH
63
3
HOH
HOH
324
A
HOH
64
3
HOH
HOH
325
A
HOH
65
3
HOH
HOH
326
A
HOH
66
3
HOH
HOH
327
A
HOH
67
3
HOH
HOH
328
A
HOH
68
3
HOH
HOH
329
A
HOH
69
3
HOH
HOH
330
A
HOH
70
3
HOH
HOH
331
A
HOH
71
3
HOH
HOH
332
A
HOH
72
3
HOH
HOH
333
A
HOH
73
3
HOH
HOH
334
A
HOH
74
3
HOH
HOH
335
A
HOH
75
3
HOH
HOH
336
A
HOH
76
3
HOH
HOH
337
A
HOH
77
3
HOH
HOH
338
A
HOH
78
3
HOH
HOH
339
A
HOH
79
3
HOH
HOH
340
A
HOH
80
3
HOH
HOH
341
A
HOH
81
3
HOH
HOH
342
A
HOH
82
3
HOH
HOH
343
A
HOH
83
3
HOH
HOH
344
A
HOH
84
3
HOH
HOH
345
A
HOH
85
3
HOH
HOH
346
A
HOH
86
3
HOH
HOH
347
A
HOH
87
3
HOH
HOH
348
A
HOH
88
3
HOH
HOH
349
A
HOH
89
3
HOH
HOH
350
A
HOH
90
3
HOH
HOH
351
A
HOH
91
3
HOH
HOH
352
A
HOH
92
3
HOH
HOH
353
A
HOH
93
3
HOH
HOH
354
A
HOH
94
3
HOH
HOH
355
A
n
1
-11
A
n
2
-10
A
n
3
-9
A
n
4
-8
A
n
5
-7
A
n
6
-6
A
n
7
-5
A
n
8
-4
A
n
9
-3
A
n
10
-2
A
n
11
-1
A
HIS
0
n
12
HIS
0
A
MET
1
n
13
MET
1
A
VAL
2
n
14
VAL
2
A
TYR
3
n
15
TYR
3
A
VAL
4
n
16
VAL
4
A
GLY
5
n
17
GLY
5
A
THR
6
n
18
THR
6
A
SER
7
n
19
SER
7
A
GLY
8
n
20
GLY
8
A
PHE
9
n
21
PHE
9
A
SER
10
n
22
SER
10
A
PHE
11
n
23
PHE
11
A
GLU
12
n
24
GLU
12
A
ASP
13
n
25
ASP
13
A
TRP
14
n
26
TRP
14
A
LYS
15
n
27
LYS
15
A
GLY
16
n
28
GLY
16
A
VAL
17
n
29
VAL
17
A
VAL
18
n
30
VAL
18
A
TYR
19
n
31
TYR
19
A
PRO
20
n
32
PRO
20
A
GLU
21
n
33
GLU
21
A
HIS
22
n
34
HIS
22
A
LEU
23
n
35
LEU
23
A
LYS
24
n
36
LYS
24
A
PRO
25
n
37
PRO
25
A
SER
26
n
38
SER
26
A
GLN
27
n
39
GLN
27
A
PHE
28
n
40
PHE
28
A
LEU
29
n
41
LEU
29
A
LYS
30
n
42
LYS
30
A
TYR
31
n
43
TYR
31
A
TYR
32
n
44
TYR
32
A
TRP
33
n
45
TRP
33
A
ALA
34
n
46
ALA
34
A
VAL
35
n
47
VAL
35
A
LEU
36
n
48
LEU
36
A
GLY
37
n
49
GLY
37
A
PHE
38
n
50
PHE
38
A
ARG
39
n
51
ARG
39
A
ILE
40
n
52
ILE
40
A
VAL
41
n
53
VAL
41
A
GLU
42
n
54
GLU
42
A
LEU
43
n
55
LEU
43
A
ASN
44
n
56
ASN
44
A
PHE
45
n
57
PHE
45
A
THR
46
n
58
THR
46
A
TYR
47
n
59
TYR
47
A
TYR
48
n
60
TYR
48
A
THR
49
n
61
THR
49
A
GLN
50
n
62
GLN
50
A
PRO
51
n
63
PRO
51
A
SER
52
n
64
SER
52
A
TRP
53
n
65
TRP
53
A
ARG
54
n
66
ARG
54
A
SER
55
n
67
SER
55
A
PHE
56
n
68
PHE
56
A
VAL
57
n
69
VAL
57
A
GLN
58
n
70
GLN
58
A
MET
59
n
71
MET
59
A
LEU
60
n
72
LEU
60
A
ARG
61
n
73
ARG
61
A
LYS
62
n
74
LYS
62
A
THR
63
n
75
THR
63
A
PRO
64
n
76
PRO
64
A
PRO
65
n
77
PRO
65
A
ASP
66
n
78
ASP
66
A
PHE
67
n
79
PHE
67
A
TYR
68
n
80
TYR
68
A
PHE
69
n
81
PHE
69
A
THR
70
n
82
THR
70
A
VAL
71
n
83
VAL
71
A
LYS
72
n
84
LYS
72
A
THR
73
n
85
THR
73
A
PRO
74
n
86
PRO
74
A
GLY
75
n
87
GLY
75
A
SER
76
n
88
SER
76
A
VAL
77
n
89
VAL
77
A
THR
78
n
90
THR
78
A
HIS
79
n
91
HIS
79
A
VAL
80
n
92
VAL
80
A
LEU
81
n
93
LEU
81
A
TRP
82
n
94
TRP
82
A
LYS
83
n
95
LYS
83
A
GLU
84
n
96
GLU
84
A
GLY
85
n
97
GLY
85
A
LYS
86
n
98
LYS
86
A
ASP
87
n
99
ASP
87
A
PRO
88
n
100
PRO
88
A
LYS
89
n
101
LYS
89
A
GLU
90
n
102
GLU
90
A
ASP
91
n
103
ASP
91
A
MET
92
n
104
MET
92
A
GLU
93
n
105
GLU
93
A
ASN
94
n
106
ASN
94
A
PHE
95
n
107
PHE
95
A
THR
96
n
108
THR
96
A
ARG
97
n
109
ARG
97
A
GLN
98
n
110
GLN
98
A
ILE
99
n
111
ILE
99
A
GLU
100
n
112
GLU
100
A
PRO
101
n
113
PRO
101
A
LEU
102
n
114
LEU
102
A
ILE
103
n
115
ILE
103
A
GLU
104
n
116
GLU
104
A
GLU
105
n
117
GLU
105
A
GLN
106
n
118
GLN
106
A
ARG
107
n
119
ARG
107
A
LEU
108
n
120
LEU
108
A
LYS
109
n
121
LYS
109
A
MET
110
n
122
MET
110
A
THR
111
n
123
THR
111
A
LEU
112
n
124
LEU
112
A
ALA
113
n
125
ALA
113
A
GLN
114
n
126
GLN
114
A
PHE
115
n
127
PHE
115
A
PRO
116
n
128
PRO
116
A
PHE
117
n
129
PHE
117
A
SER
118
n
130
SER
118
A
PHE
119
n
131
PHE
119
A
LYS
120
n
132
LYS
120
A
PHE
121
n
133
PHE
121
A
SER
122
n
134
SER
122
A
ARG
123
n
135
ARG
123
A
LYS
124
n
136
LYS
124
A
ASN
125
n
137
ASN
125
A
VAL
126
n
138
VAL
126
A
GLU
127
n
139
GLU
127
A
TYR
128
n
140
TYR
128
A
LEU
129
n
141
LEU
129
A
GLU
130
n
142
GLU
130
A
LYS
131
n
143
LYS
131
A
LEU
132
n
144
LEU
132
A
ARG
133
n
145
ARG
133
A
GLU
134
n
146
GLU
134
A
SER
135
n
147
SER
135
A
TYR
136
n
148
TYR
136
A
PRO
137
n
149
PRO
137
A
TYR
138
n
150
TYR
138
A
GLU
139
n
151
GLU
139
A
LEU
140
n
152
LEU
140
A
ALA
141
n
153
ALA
141
A
VAL
142
n
154
VAL
142
A
GLU
143
n
155
GLU
143
A
PHE
144
n
156
PHE
144
A
ARG
145
n
157
ARG
145
A
HIS
146
n
158
HIS
146
A
TYR
147
n
159
TYR
147
A
SER
148
n
160
SER
148
A
TRP
149
n
161
TRP
149
A
ASP
150
n
162
ASP
150
A
ARG
151
n
163
ARG
151
A
GLU
152
n
164
GLU
152
A
GLU
153
n
165
GLU
153
A
THR
154
n
166
THR
154
A
TYR
155
n
167
TYR
155
A
GLU
156
n
168
GLU
156
A
PHE
157
n
169
PHE
157
A
LEU
158
n
170
LEU
158
A
ARG
159
n
171
ARG
159
A
ASN
160
n
172
ASN
160
A
HIS
161
n
173
HIS
161
A
GLY
162
n
174
GLY
162
A
ILE
163
n
175
ILE
163
A
THR
164
n
176
THR
164
A
PHE
165
n
177
PHE
165
A
VAL
166
n
178
VAL
166
A
VAL
167
n
179
VAL
167
A
VAL
168
n
180
VAL
168
A
ASP
169
n
181
ASP
169
A
GLU
170
n
182
GLU
170
A
PRO
171
n
183
PRO
171
A
LYS
172
n
184
LYS
172
A
LEU
173
n
185
LEU
173
A
PRO
174
n
186
PRO
174
A
GLY
175
n
187
GLY
175
A
LEU
176
n
188
LEU
176
A
PHE
177
n
189
PHE
177
A
PRO
178
n
190
PRO
178
A
TYR
179
n
191
TYR
179
A
ARG
180
n
192
ARG
180
A
PRO
181
n
193
PRO
181
A
ILE
182
n
194
ILE
182
A
THR
183
n
195
THR
183
A
THR
184
n
196
THR
184
A
THR
185
n
197
THR
185
A
ASP
186
n
198
ASP
186
A
TYR
187
n
199
TYR
187
A
ALA
188
n
200
ALA
188
A
TYR
189
n
201
TYR
189
A
PHE
190
n
202
PHE
190
A
ARG
191
n
203
ARG
191
A
PHE
192
n
204
PHE
192
A
HIS
193
n
205
HIS
193
A
GLY
194
n
206
GLY
194
A
ARG
195
n
207
ARG
195
A
ASN
196
n
208
ASN
196
A
GLU
197
n
209
GLU
197
A
ARG
198
n
210
ARG
198
A
TRP
199
n
211
TRP
199
A
PHE
200
n
212
PHE
200
A
GLU
201
n
213
GLU
201
A
ALA
202
n
214
ALA
202
A
GLU
203
n
215
GLU
203
A
GLY
204
n
216
GLY
204
A
GLU
205
n
217
GLU
205
A
GLU
206
n
218
GLU
206
A
ARG
207
n
219
ARG
207
A
TYR
208
n
220
TYR
208
A
ASP
209
n
221
ASP
209
A
TYR
210
n
222
TYR
210
A
LEU
211
n
223
LEU
211
A
TYR
212
n
224
TYR
212
A
SER
213
n
225
SER
213
A
GLU
214
n
226
GLU
214
A
GLU
215
n
227
GLU
215
A
GLU
216
n
228
GLU
216
A
LEU
217
n
229
LEU
217
A
LYS
218
n
230
LYS
218
A
THR
219
n
231
THR
219
A
LEU
220
n
232
LEU
220
A
PHE
221
n
233
PHE
221
A
GLU
222
n
234
GLU
222
A
ASP
223
n
235
ASP
223
A
VAL
224
n
236
VAL
224
A
VAL
225
n
237
VAL
225
A
GLU
226
n
238
GLU
226
A
LEU
227
n
239
LEU
227
A
SER
228
n
240
SER
228
A
ARG
229
n
241
ARG
229
A
ARG
230
n
242
ARG
230
A
VAL
231
n
243
VAL
231
A
LYS
232
n
244
LYS
232
A
GLU
233
n
245
GLU
233
A
THR
234
n
246
THR
234
A
TYR
235
n
247
TYR
235
A
VAL
236
n
248
VAL
236
A
PHE
237
n
249
PHE
237
A
PHE
238
n
250
PHE
238
A
ASN
239
n
251
ASN
239
A
ASN
240
n
252
ASN
240
A
CYS
241
n
253
CYS
241
A
TYR
242
n
254
TYR
242
A
LYS
243
n
255
LYS
243
A
GLY
244
n
256
GLY
244
A
GLN
245
n
257
GLN
245
A
ALA
246
n
258
ALA
246
A
ALA
247
n
259
ALA
247
A
ILE
248
n
260
ILE
248
A
ASN
249
n
261
ASN
249
A
ALA
250
n
262
ALA
250
A
LEU
251
n
263
LEU
251
A
GLN
252
n
264
GLN
252
A
PHE
253
n
265
PHE
253
A
LYS
254
n
266
LYS
254
A
LYS
255
n
267
LYS
255
A
MET
256
n
268
MET
256
A
LEU
257
n
269
LEU
257
A
GLU
258
n
270
GLU
258
A
GLU
259
n
271
GLU
259
A
n
272
260
A
n
273
261
A
1.4689
1.2279
0.1853
6.2529
1.3399
3.0614
-0.0194
-0.2910
-0.0346
0.7462
-0.0935
0.4829
-0.2740
-0.3680
0.1129
-0.0145
0.0415
0.0369
0.0031
0.0394
0.0211
refined
16.8550
11.4400
6.6220
X-RAY DIFFRACTION
1.4059
-0.1482
0.0987
3.1227
-0.0221
1.7808
-0.0036
-0.1490
-0.0588
0.1898
0.0229
0.0343
0.0216
-0.0318
-0.0193
-0.2049
0.0000
0.0072
-0.0713
0.0219
-0.1103
refined
26.0160
23.1690
-4.0450
X-RAY DIFFRACTION
A
1
A
13
A
59
A
71
X-RAY DIFFRACTION
1
ALL
A
60
A
72
A
259
A
271
X-RAY DIFFRACTION
2
ALL
author_defined_assembly
1
monomeric
software_defined_assembly
PISA,PQS
2
dimeric
3060
-115
22050
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
3_654
-x+1,y,-z-1/2
crystal symmetry operation
53.2860000000
0.0000000000
-40.2305000000
A
N
TYR
3
A
N
TYR
15
A
O
THR
234
A
O
THR
246
A
O
TYR
235
A
O
TYR
247
A
N
PHE
190
A
N
PHE
202
A
O
TYR
189
A
O
TYR
201
A
N
VAL
167
A
N
VAL
179
A
O
THR
164
A
O
THR
176
A
N
LEU
140
A
N
LEU
152
A
O
ALA
141
A
O
ALA
153
A
N
ALA
113
A
N
ALA
125
A
O
LEU
112
A
O
LEU
124
A
N
VAL
71
A
N
VAL
83
A
O
THR
70
A
O
THR
82
A
N
LEU
43
A
N
LEU
55
1
A
SO4
264
D
SO4
1
A
HOH
305
E
HOH
1
A
NZ
LYS
15
A
NZ
LYS
27
1
Y
1
A
CD
LYS
24
A
CD
LYS
36
1
Y
1
A
CE
LYS
24
A
CE
LYS
36
1
Y
1
A
NZ
LYS
24
A
NZ
LYS
36
1
Y
1
A
CG
GLN
27
A
CG
GLN
39
1
Y
1
A
CD
GLN
27
A
CD
GLN
39
1
Y
1
A
OE1
GLN
27
A
OE1
GLN
39
1
Y
1
A
NE2
GLN
27
A
NE2
GLN
39
1
Y
1
A
CG
ARG
54
A
CG
ARG
66
1
Y
1
A
CD
ARG
54
A
CD
ARG
66
1
Y
1
A
NE
ARG
54
A
NE
ARG
66
1
Y
1
A
CZ
ARG
54
A
CZ
ARG
66
1
Y
1
A
NH1
ARG
54
A
NH1
ARG
66
1
Y
1
A
NH2
ARG
54
A
NH2
ARG
66
1
Y
1
A
CD
ARG
61
A
CD
ARG
73
1
Y
1
A
NE
ARG
61
A
NE
ARG
73
1
Y
1
A
CZ
ARG
61
A
CZ
ARG
73
1
Y
1
A
NH1
ARG
61
A
NH1
ARG
73
1
Y
1
A
NH2
ARG
61
A
NH2
ARG
73
1
Y
1
A
CE
LYS
62
A
CE
LYS
74
1
Y
1
A
NZ
LYS
62
A
NZ
LYS
74
1
Y
1
A
CG
LYS
89
A
CG
LYS
101
1
Y
1
A
CD
LYS
89
A
CD
LYS
101
1
Y
1
A
CE
LYS
89
A
CE
LYS
101
1
Y
1
A
NZ
LYS
89
A
NZ
LYS
101
1
Y
1
A
CG
ARG
97
A
CG
ARG
109
1
Y
1
A
CD
ARG
97
A
CD
ARG
109
1
Y
1
A
NE
ARG
97
A
NE
ARG
109
1
Y
1
A
CZ
ARG
97
A
CZ
ARG
109
1
Y
1
A
NH1
ARG
97
A
NH1
ARG
109
1
Y
1
A
NH2
ARG
97
A
NH2
ARG
109
1
Y
1
A
CG
LYS
124
A
CG
LYS
136
1
Y
1
A
CD
LYS
124
A
CD
LYS
136
1
Y
1
A
CE
LYS
124
A
CE
LYS
136
1
Y
1
A
NZ
LYS
124
A
NZ
LYS
136
1
Y
1
A
NE
ARG
198
A
NE
ARG
210
1
Y
1
A
CZ
ARG
198
A
CZ
ARG
210
1
Y
1
A
NH1
ARG
198
A
NH1
ARG
210
1
Y
1
A
NH2
ARG
198
A
NH2
ARG
210
1
Y
1
A
CG
GLU
214
A
CG
GLU
226
1
Y
1
A
CD
GLU
214
A
CD
GLU
226
1
Y
1
A
OE1
GLU
214
A
OE1
GLU
226
1
Y
1
A
OE2
GLU
214
A
OE2
GLU
226
1
Y
1
A
CG
LYS
218
A
CG
LYS
230
1
Y
1
A
CD
LYS
218
A
CD
LYS
230
1
Y
1
A
CE
LYS
218
A
CE
LYS
230
1
Y
1
A
NZ
LYS
218
A
NZ
LYS
230
1
Y
1
A
CG
GLU
222
A
CG
GLU
234
1
Y
1
A
CD
GLU
222
A
CD
GLU
234
1
Y
1
A
OE1
GLU
222
A
OE1
GLU
234
1
Y
1
A
OE2
GLU
222
A
OE2
GLU
234
1
Y
1
A
CG
GLU
226
A
CG
GLU
238
1
Y
1
A
CD
GLU
226
A
CD
GLU
238
1
Y
1
A
OE1
GLU
226
A
OE1
GLU
238
1
Y
1
A
OE2
GLU
226
A
OE2
GLU
238
1
Y
1
A
NE
ARG
229
A
NE
ARG
241
1
Y
1
A
CZ
ARG
229
A
CZ
ARG
241
1
Y
1
A
NH1
ARG
229
A
NH1
ARG
241
1
Y
1
A
NH2
ARG
229
A
NH2
ARG
241
1
Y
1
A
CG
ARG
230
A
CG
ARG
242
1
Y
1
A
CD
ARG
230
A
CD
ARG
242
1
Y
1
A
NE
ARG
230
A
NE
ARG
242
1
Y
1
A
CZ
ARG
230
A
CZ
ARG
242
1
Y
1
A
NH1
ARG
230
A
NH1
ARG
242
1
Y
1
A
NH2
ARG
230
A
NH2
ARG
242
1
Y
1
A
MET
-11
A
MET
1
1
Y
1
A
GLY
-10
A
GLY
2
1
Y
1
A
SER
-9
A
SER
3
1
Y
1
A
ASP
-8
A
ASP
4
1
Y
1
A
LYS
-7
A
LYS
5
1
Y
1
A
ILE
-6
A
ILE
6
1
Y
1
A
HIS
-5
A
HIS
7
1
Y
1
A
HIS
-4
A
HIS
8
1
Y
1
A
HIS
-3
A
HIS
9
1
Y
1
A
HIS
-2
A
HIS
10
1
Y
1
A
HIS
-1
A
HIS
11
1
Y
1
A
ARG
260
A
ARG
272
1
Y
1
A
VAL
261
A
VAL
273
1
Y
1
A
A
OH
OE1
TYR
GLU
47
156
2.16
1_555
8_455
1
A
ASP
13
-36.22
-38.52
1
A
VAL
17
-131.08
-78.53
1
A
VAL
35
-104.81
-61.61
1
A
ASP
66
-92.70
39.65
1
A
VAL
80
-130.92
-64.30
29.804
3.77
0.00
0.00
-2.85
0.00
-0.92
0.944
0.918
1).HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS 2).A SO4 ANION IS LOCATED AT THE TWO-FOLD CRYSTALLOGRAPHIC SYMMETRY AXIS AT THE INTERFACE BETWEEN TWO MONOMERS. THE S AND O ATOMS ON THESE RESIDUES WERE MODELED WITH OCCUPANCIES OF 0.50.
0.26256
0.20602
0.20872
2.20
49.63
656
12722
4.9
87.61
18.974
0.228
RANDOM
LIKELY RESIDUAL
1
THROUGHOUT
MAD + MOLECULAR REPLACEMENT
0.386
0.260
0.80
0.80
1.20
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
2.20
49.63
91
2286
15
0
2180
0.008
0.022
2270
0.005
0.020
1940
1.050
1.944
3088
0.739
3.000
4493
5.854
5.000
259
31.379
23.445
119
14.154
15.000
353
19.712
15.000
11
0.060
0.200
313
0.003
0.020
2514
0.001
0.020
531
0.189
0.200
433
0.186
0.200
1967
0.082
0.200
1104
0.173
0.200
95
0.152
0.200
19
0.173
0.200
58
0.303
0.200
5
0.526
1.500
1399
0.054
1.500
519
0.604
2.000
2113
0.896
3.000
1107
1.302
4.500
975
0.189
0.200
1093
0.466
0.351
2.257
37
697
20
5.04
66.91
37.60
2.200
49.63
1VPQ
13378
0.095
1,2
10.5
3.2
88.4
0.4
2.20
2.26
2.8
736
1,2
2.2
67.3
data reduction
MOSFLM
data scaling
SCALA
4.2)
phasing
SHARP
refinement
REFMAC
5.2.0005
data scaling
CCP4
(SCALA)
CRYSTAL STRUCTURE OF a DUF72 family protein (TM1631) FROM THERMOTOGA MARITIMA MSB8 AT 2.20 A RESOLUTION
1
N
N
2
N
N
2
N
N
2
N
N
3
N
N
A
LYS
24
A
LYS
36
HELX_P
A
SER
26
A
SER
38
5
1
3
A
GLN
27
A
GLN
39
HELX_P
A
VAL
35
A
VAL
47
1
2
9
A
SER
52
A
SER
64
HELX_P
A
ARG
61
A
ARG
73
1
3
10
A
PRO
74
A
PRO
86
HELX_P
A
VAL
80
A
VAL
92
1
4
7
A
VAL
80
A
VAL
92
HELX_P
A
GLY
85
A
GLY
97
1
5
6
A
PRO
88
A
PRO
100
HELX_P
A
GLU
105
A
GLU
117
1
6
18
A
SER
122
A
SER
134
HELX_P
A
TYR
136
A
TYR
148
1
7
15
A
HIS
146
A
HIS
158
HELX_P
A
ASP
150
A
ASP
162
5
8
5
A
ARG
151
A
ARG
163
HELX_P
A
HIS
161
A
HIS
173
1
9
11
A
GLU
203
A
GLU
215
HELX_P
A
ARG
207
A
ARG
219
5
10
5
A
SER
213
A
SER
225
HELX_P
A
ARG
229
A
ARG
241
1
11
17
A
CYS
241
A
CYS
253
HELX_P
A
LYS
243
A
LYS
255
5
12
3
A
GLY
244
A
GLY
256
HELX_P
A
GLU
259
A
GLU
271
1
13
16
UNKNOWN FUNCTION
STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI, UNKNOWN FUNCTION
A
GLN
50
A
GLN
62
1
A
PRO
51
A
PRO
63
2.56
Q9X1W6_THEMA
UNP
1
1
Q9X1W6
MVYVGTSGFSFEDWKGVVYPEHLKPSQFLKYYWAVLGFRIVELNFTYYTQPSWRSFVQMLRKTPPDFYFTVKTPGSVTHV
LWKEGKDPKEDMENFTRQIEPLIEEQRLKMTLAQFPFSFKFSRKNVEYLEKLRESYPYELAVEFRHYSWDREETYEFLRN
HGITFVVVDEPKLPGLFPYRPITTTDYAYFRFHGRNERWFEAEGEERYDYLYSEEELKTLFEDVVELSRRVKETYVFFNN
CYKGQAAINALQFKKMLEERV
1
261
1VPQ
1
261
Q9X1W6
A
1
13
273
1
expression tag
MET
-11
1VPQ
A
Q9X1W6
UNP
1
1
expression tag
GLY
-10
1VPQ
A
Q9X1W6
UNP
2
1
expression tag
SER
-9
1VPQ
A
Q9X1W6
UNP
3
1
expression tag
ASP
-8
1VPQ
A
Q9X1W6
UNP
4
1
expression tag
LYS
-7
1VPQ
A
Q9X1W6
UNP
5
1
expression tag
ILE
-6
1VPQ
A
Q9X1W6
UNP
6
1
expression tag
HIS
-5
1VPQ
A
Q9X1W6
UNP
7
1
expression tag
HIS
-4
1VPQ
A
Q9X1W6
UNP
8
1
expression tag
HIS
-3
1VPQ
A
Q9X1W6
UNP
9
1
expression tag
HIS
-2
1VPQ
A
Q9X1W6
UNP
10
1
expression tag
HIS
-1
1VPQ
A
Q9X1W6
UNP
11
1
expression tag
HIS
0
1VPQ
A
Q9X1W6
UNP
12
8
parallel
parallel
parallel
parallel
parallel
parallel
parallel
A
MET
1
A
MET
13
A
THR
6
A
THR
18
A
GLU
233
A
GLU
245
A
PHE
238
A
PHE
250
A
TYR
187
A
TYR
199
A
PHE
192
A
PHE
204
A
THR
164
A
THR
176
A
ASP
169
A
ASP
181
A
LEU
140
A
LEU
152
A
GLU
143
A
GLU
155
A
LEU
108
A
LEU
120
A
GLN
114
A
GLN
126
A
TYR
68
A
TYR
80
A
LYS
72
A
LYS
84
A
ILE
40
A
ILE
52
A
LEU
43
A
LEU
55
BINDING SITE FOR RESIDUE SO4 A 262
A
SO4
262
Software
7
BINDING SITE FOR RESIDUE SO4 A 263
A
SO4
263
Software
6
BINDING SITE FOR RESIDUE SO4 A 264
A
SO4
264
Software
7
A
LYS
72
A
LYS
84
7
1_555
A
GLN
114
A
GLN
126
7
1_555
A
ARG
145
A
ARG
157
7
1_555
A
ARG
191
A
ARG
203
7
1_555
A
HIS
193
A
HIS
205
7
1_555
A
TYR
208
A
TYR
220
7
1_555
A
ASN
239
A
ASN
251
7
1_555
A
PRO
116
A
PRO
128
6
1_555
A
PHE
117
A
PHE
129
6
1_555
A
ARG
145
A
ARG
157
6
1_555
A
ARG
207
A
ARG
219
6
1_555
A
HOH
266
E
HOH
6
1_555
A
HOH
310
E
HOH
6
1_555
A
LYS
172
A
LYS
184
7
1_555
A
LYS
172
A
LYS
184
7
3_654
A
PRO
178
A
PRO
190
7
1_555
A
TYR
179
A
TYR
191
7
3_654
A
TYR
179
A
TYR
191
7
1_555
A
ARG
180
A
ARG
192
7
1_555
A
ARG
180
A
ARG
192
7
3_654
20
C 2 2 21