data_1VTB # _entry.id 1VTB # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1VTB pdb_00001vtb 10.2210/pdb1vtb/pdb NDB ADH034 ? ? RCSB RCSB003035 ? ? WWPDB D_1000003035 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2011-07-13 2 'Structure model' 1 1 2023-12-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1VTB _pdbx_database_status.recvd_initial_deposition_date 1991-05-28 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Jain, S.C.' 1 'Zon, G.' 2 'Sundaralingam, M.' 3 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;The Hexagonal Crystal Structure of the A-DNA Octamer d(GTGTACAC) and Its Comparison with the Tetragonal Structure Correlated Variations in Helical Parameters ; Biochemistry 30 3567 3576 1991 BICHAW US 0006-2960 0033 ? ? ? 1 'Effect of Crystal Packing Environment on Conformation of the DNA Duplex' J.Biol.Chem. 264 12780 12784 1989 JBCHA3 US 0021-9258 0071 ? ? ? 2 'Base Only Binding of Spermine in the Deep Groove of the A-DNA Octamer d(GTGTACAC)' Biochemistry 28 2360 2364 1989 BICHAW US 0006-2960 0033 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Jain, S.C.' 1 ? primary 'Zon, G.' 2 ? primary 'Sundaralingam, M.' 3 ? 1 'Jain, S.' 4 ? 1 'Sundaralingam, M.' 5 ? 2 'Jain, S.' 6 ? 2 'Zon, G.' 7 ? 2 'Sundaralingam, M.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*GP*TP*GP*TP*AP*CP*AP*C)-3') ; 2426.617 1 ? ? ? ? 2 water nat water 18.015 50 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DG)(DT)(DG)(DT)(DA)(DC)(DA)(DC)' _entity_poly.pdbx_seq_one_letter_code_can GTGTACAC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DT n 1 3 DG n 1 4 DT n 1 5 DA n 1 6 DC n 1 7 DA n 1 8 DC n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG G A . n A 1 2 DT 2 2 2 DT T A . n A 1 3 DG 3 3 3 DG G A . n A 1 4 DT 4 4 4 DT T A . n A 1 5 DA 5 5 5 DA A A . n A 1 6 DC 6 6 6 DC C A . n A 1 7 DA 7 7 7 DA A A . n A 1 8 DC 8 8 8 DC C A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 9 9 HOH HOH A . B 2 HOH 2 10 10 HOH HOH A . B 2 HOH 3 11 11 HOH HOH A . B 2 HOH 4 12 12 HOH HOH A . B 2 HOH 5 13 13 HOH HOH A . B 2 HOH 6 14 14 HOH HOH A . B 2 HOH 7 15 15 HOH HOH A . B 2 HOH 8 16 16 HOH HOH A . B 2 HOH 9 17 17 HOH HOH A . B 2 HOH 10 18 18 HOH HOH A . B 2 HOH 11 19 19 HOH HOH A . B 2 HOH 12 20 20 HOH HOH A . B 2 HOH 13 21 21 HOH HOH A . B 2 HOH 14 22 22 HOH HOH A . B 2 HOH 15 23 23 HOH HOH A . B 2 HOH 16 24 24 HOH HOH A . B 2 HOH 17 25 25 HOH HOH A . B 2 HOH 18 26 26 HOH HOH A . B 2 HOH 19 27 27 HOH HOH A . B 2 HOH 20 28 28 HOH HOH A . B 2 HOH 21 29 29 HOH HOH A . B 2 HOH 22 30 30 HOH HOH A . B 2 HOH 23 31 31 HOH HOH A . B 2 HOH 24 32 32 HOH HOH A . B 2 HOH 25 33 33 HOH HOH A . B 2 HOH 26 34 34 HOH HOH A . B 2 HOH 27 35 35 HOH HOH A . B 2 HOH 28 36 36 HOH HOH A . B 2 HOH 29 37 37 HOH HOH A . B 2 HOH 30 38 38 HOH HOH A . B 2 HOH 31 39 39 HOH HOH A . B 2 HOH 32 40 40 HOH HOH A . B 2 HOH 33 41 41 HOH HOH A . B 2 HOH 34 42 42 HOH HOH A . B 2 HOH 35 43 43 HOH HOH A . B 2 HOH 36 44 44 HOH HOH A . B 2 HOH 37 45 45 HOH HOH A . B 2 HOH 38 46 46 HOH HOH A . B 2 HOH 39 47 47 HOH HOH A . B 2 HOH 40 48 48 HOH HOH A . B 2 HOH 41 49 49 HOH HOH A . B 2 HOH 42 50 50 HOH HOH A . B 2 HOH 43 51 51 HOH HOH A . B 2 HOH 44 52 52 HOH HOH A . B 2 HOH 45 53 53 HOH HOH A . B 2 HOH 46 54 54 HOH HOH A . B 2 HOH 47 55 55 HOH HOH A . B 2 HOH 48 56 56 HOH HOH A . B 2 HOH 49 57 57 HOH HOH A . B 2 HOH 50 58 58 HOH HOH A . # _software.name NUCLSQ _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 1VTB _cell.length_a 32.400 _cell.length_b 32.400 _cell.length_c 79.250 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1VTB _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1VTB _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 50.29 _exptl_crystal.density_Matthews 2.47 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp 278.00 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_details 'VAPOR DIFFUSION, temperature 278.00K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 WATER 1 2 3 1 2 1 MPD 4 5 6 1 3 1 MGCL2 7 8 9 1 4 1 SPERMINE 10 11 12 1 5 2 WATER 13 14 15 1 6 2 MPD 16 17 18 # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'OSCILLATION CAMERA' _diffrn_detector.type ARNDT-WONACOTT _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1VTB _reflns.observed_criterion_sigma_I 1.500 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low ? _reflns.d_resolution_high 2.000 _reflns.number_obs 1683 _reflns.number_all 8156 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _refine.entry_id 1VTB _refine.ls_number_reflns_obs 1561 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I 1.500 _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high 2.000 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.1270000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_overall_phase_error ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 161 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 50 _refine_hist.number_atoms_total 211 _refine_hist.d_res_high 2.000 _refine_hist.d_res_low . # _database_PDB_matrix.entry_id 1VTB _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1VTB _struct.title ;THE HEXAGONAL CRYSTAL STRUCTURE OF THE A-DNA OCTAMER D(GTGTACAC) AND ITS COMPARISON WITH THE TETRAGONAL STRUCTURE CORRELATED VARIATIONS IN HELICAL PARAMETERS ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1VTB _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'A-DNA, DOUBLE HELIX, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 1VTB _struct_ref.pdbx_db_accession 1VTB _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1VTB _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 8 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 1VTB _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 8 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 8 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 740 ? 1 MORE -5 ? 1 'SSA (A^2)' 3070 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 12_555 x,x-y,-z+1/6 0.5000000000 0.8660254038 0.0000000000 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 13.2083333333 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 A DC 8 N3 ? ? A DG 1 A DC 8 12_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 A DC 8 O2 ? ? A DG 1 A DC 8 12_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 A DC 8 N4 ? ? A DG 1 A DC 8 12_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 2 N3 ? ? ? 1_555 A DA 7 N1 ? ? A DT 2 A DA 7 12_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DT 2 O4 ? ? ? 1_555 A DA 7 N6 ? ? A DT 2 A DA 7 12_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 3 N1 ? ? ? 1_555 A DC 6 N3 ? ? A DG 3 A DC 6 12_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N2 ? ? ? 1_555 A DC 6 O2 ? ? A DG 3 A DC 6 12_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 O6 ? ? ? 1_555 A DC 6 N4 ? ? A DG 3 A DC 6 12_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DT 4 N3 ? ? ? 1_555 A DA 5 N1 ? ? A DT 4 A DA 5 12_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 4 O4 ? ? ? 1_555 A DA 5 N6 ? ? A DT 4 A DA 5 12_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 5 N1 ? ? ? 1_555 A DT 4 N3 ? ? A DA 5 A DT 4 12_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 5 N6 ? ? ? 1_555 A DT 4 O4 ? ? A DA 5 A DT 4 12_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DC 6 N3 ? ? ? 1_555 A DG 3 N1 ? ? A DC 6 A DG 3 12_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DC 6 N4 ? ? ? 1_555 A DG 3 O6 ? ? A DC 6 A DG 3 12_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DC 6 O2 ? ? ? 1_555 A DG 3 N2 ? ? A DC 6 A DG 3 12_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DA 7 N1 ? ? ? 1_555 A DT 2 N3 ? ? A DA 7 A DT 2 12_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DA 7 N6 ? ? ? 1_555 A DT 2 O4 ? ? A DA 7 A DT 2 12_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 8 N3 ? ? ? 1_555 A DG 1 N1 ? ? A DC 8 A DG 1 12_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 8 N4 ? ? ? 1_555 A DG 1 O6 ? ? A DC 8 A DG 1 12_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 8 O2 ? ? ? 1_555 A DG 1 N2 ? ? A DC 8 A DG 1 12_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 P A DG 3 ? ? "O5'" A DG 3 ? ? 1.711 1.593 0.118 0.010 N 2 1 "O3'" A DG 3 ? ? P A DT 4 ? ? 1.528 1.607 -0.079 0.012 Y 3 1 P A DC 8 ? ? "O5'" A DC 8 ? ? 1.674 1.593 0.081 0.010 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 OP1 A DT 2 ? ? P A DT 2 ? ? OP2 A DT 2 ? ? 110.06 119.60 -9.54 1.50 N 2 1 "O5'" A DT 2 ? ? P A DT 2 ? ? OP2 A DT 2 ? ? 119.77 110.70 9.07 1.20 N 3 1 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 110.53 108.30 2.23 0.30 N 4 1 C2 A DT 2 ? ? N3 A DT 2 ? ? C4 A DT 2 ? ? 122.06 127.20 -5.14 0.60 N 5 1 N3 A DT 2 ? ? C4 A DT 2 ? ? C5 A DT 2 ? ? 119.78 115.20 4.58 0.60 N 6 1 "O3'" A DT 2 ? ? P A DG 3 ? ? OP2 A DG 3 ? ? 122.74 110.50 12.24 1.10 Y 7 1 "O5'" A DG 3 ? ? P A DG 3 ? ? OP2 A DG 3 ? ? 98.67 105.70 -7.03 0.90 N 8 1 C2 A DT 4 ? ? N3 A DT 4 ? ? C4 A DT 4 ? ? 122.25 127.20 -4.95 0.60 N 9 1 N3 A DT 4 ? ? C4 A DT 4 ? ? C5 A DT 4 ? ? 119.33 115.20 4.13 0.60 N 10 1 OP1 A DA 5 ? ? P A DA 5 ? ? OP2 A DA 5 ? ? 108.70 119.60 -10.90 1.50 N 11 1 C6 A DA 5 ? ? N1 A DA 5 ? ? C2 A DA 5 ? ? 123.70 118.60 5.10 0.60 N 12 1 N1 A DA 5 ? ? C2 A DA 5 ? ? N3 A DA 5 ? ? 123.83 129.30 -5.47 0.50 N 13 1 "C3'" A DC 6 ? ? "O3'" A DC 6 ? ? P A DA 7 ? ? 129.29 119.70 9.59 1.20 Y 14 1 "O4'" A DA 7 ? ? "C1'" A DA 7 ? ? N9 A DA 7 ? ? 112.37 108.30 4.07 0.30 N 15 1 N1 A DA 7 ? ? C6 A DA 7 ? ? N6 A DA 7 ? ? 123.50 118.60 4.90 0.60 N 16 1 OP1 A DC 8 ? ? P A DC 8 ? ? OP2 A DC 8 ? ? 128.77 119.60 9.17 1.50 N 17 1 "O5'" A DC 8 ? ? "C5'" A DC 8 ? ? "C4'" A DC 8 ? ? 103.61 109.40 -5.79 0.80 N 18 1 P A DC 8 ? ? "O5'" A DC 8 ? ? "C5'" A DC 8 ? ? 109.33 120.90 -11.57 1.60 N 19 1 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 110.60 108.30 2.30 0.30 N 20 1 N3 A DC 8 ? ? C4 A DC 8 ? ? C5 A DC 8 ? ? 118.83 121.90 -3.07 0.40 N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 # _ndb_struct_conf_na.entry_id 1VTB _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 A DC 8 12_555 -0.455 -0.193 -0.004 -10.542 -17.959 -1.575 1 A_DG1:DC8_A A 1 ? A 8 ? 19 1 1 A DT 2 1_555 A DA 7 12_555 0.115 -0.185 -0.072 -20.084 -9.550 -4.146 2 A_DT2:DA7_A A 2 ? A 7 ? 20 1 1 A DG 3 1_555 A DC 6 12_555 -0.184 -0.137 -0.058 -10.094 -14.041 0.833 3 A_DG3:DC6_A A 3 ? A 6 ? 19 1 1 A DT 4 1_555 A DA 5 12_555 0.068 -0.205 0.193 -1.235 -11.918 -0.008 4 A_DT4:DA5_A A 4 ? A 5 ? 20 1 1 A DA 5 1_555 A DT 4 12_555 -0.068 -0.205 0.193 1.235 -11.918 -0.008 5 A_DA5:DT4_A A 5 ? A 4 ? 20 1 1 A DC 6 1_555 A DG 3 12_555 0.184 -0.137 -0.058 10.094 -14.041 0.833 6 A_DC6:DG3_A A 6 ? A 3 ? 19 1 1 A DA 7 1_555 A DT 2 12_555 -0.115 -0.185 -0.072 20.085 -9.550 -4.146 7 A_DA7:DT2_A A 7 ? A 2 ? 20 1 1 A DC 8 1_555 A DG 1 12_555 0.455 -0.193 -0.004 10.542 -17.959 -1.575 8 A_DC8:DG1_A A 8 ? A 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 A DC 8 12_555 A DT 2 1_555 A DA 7 12_555 -0.652 -1.327 3.582 3.258 -1.741 37.786 -1.797 1.458 3.571 -2.681 -5.017 37.959 1 AA_DG1DT2:DA7DC8_AA A 1 ? A 8 ? A 2 ? A 7 ? 1 A DT 2 1_555 A DA 7 12_555 A DG 3 1_555 A DC 6 12_555 0.627 -1.066 3.198 -1.059 14.508 27.777 -4.447 -1.343 2.341 27.926 2.039 31.289 2 AA_DT2DG3:DC6DA7_AA A 2 ? A 7 ? A 3 ? A 6 ? 1 A DG 3 1_555 A DC 6 12_555 A DT 4 1_555 A DA 5 12_555 -0.564 -1.147 3.108 -3.578 6.466 32.964 -2.947 0.434 2.882 11.220 6.208 33.760 3 AA_DG3DT4:DA5DC6_AA A 3 ? A 6 ? A 4 ? A 5 ? 1 A DT 4 1_555 A DA 5 12_555 A DA 5 1_555 A DT 4 12_555 0.000 -1.013 3.198 0.000 9.763 29.620 -3.620 0.000 2.733 18.476 0.000 31.154 4 AA_DT4DA5:DT4DA5_AA A 4 ? A 5 ? A 5 ? A 4 ? 1 A DA 5 1_555 A DT 4 12_555 A DC 6 1_555 A DG 3 12_555 0.564 -1.147 3.108 3.578 6.466 32.964 -2.947 -0.434 2.882 11.220 -6.208 33.760 5 AA_DA5DC6:DG3DT4_AA A 5 ? A 4 ? A 6 ? A 3 ? 1 A DC 6 1_555 A DG 3 12_555 A DA 7 1_555 A DT 2 12_555 -0.627 -1.066 3.198 1.059 14.508 27.777 -4.447 1.343 2.341 27.926 -2.039 31.289 6 AA_DC6DA7:DT2DG3_AA A 6 ? A 3 ? A 7 ? A 2 ? 1 A DA 7 1_555 A DT 2 12_555 A DC 8 1_555 A DG 1 12_555 0.652 -1.327 3.582 -3.258 -1.741 37.786 -1.797 -1.458 3.571 -2.681 5.017 37.959 7 AA_DA7DC8:DG1DT2_AA A 7 ? A 2 ? A 8 ? A 1 ? # _atom_sites.entry_id 1VTB _atom_sites.fract_transf_matrix[1][1] 0.030864 _atom_sites.fract_transf_matrix[1][2] 0.017819 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.035639 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012618 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DG A 1 1 ? 15.435 2.132 10.009 1.00 30.58 ? 1 DG A "O5'" 1 ATOM 2 C "C5'" . DG A 1 1 ? 14.201 1.627 10.612 1.00 29.83 ? 1 DG A "C5'" 1 ATOM 3 C "C4'" . DG A 1 1 ? 14.356 1.852 12.101 1.00 26.93 ? 1 DG A "C4'" 1 ATOM 4 O "O4'" . DG A 1 1 ? 15.511 1.170 12.585 1.00 24.99 ? 1 DG A "O4'" 1 ATOM 5 C "C3'" . DG A 1 1 ? 14.552 3.308 12.498 1.00 20.24 ? 1 DG A "C3'" 1 ATOM 6 O "O3'" . DG A 1 1 ? 13.308 4.026 12.593 1.00 23.39 ? 1 DG A "O3'" 1 ATOM 7 C "C2'" . DG A 1 1 ? 15.265 3.207 13.845 1.00 21.26 ? 1 DG A "C2'" 1 ATOM 8 C "C1'" . DG A 1 1 ? 16.103 1.975 13.639 1.00 22.36 ? 1 DG A "C1'" 1 ATOM 9 N N9 . DG A 1 1 ? 17.465 2.304 13.171 1.00 22.50 ? 1 DG A N9 1 ATOM 10 C C8 . DG A 1 1 ? 18.022 1.838 12.006 1.00 20.80 ? 1 DG A C8 1 ATOM 11 N N7 . DG A 1 1 ? 19.267 2.214 11.840 1.00 23.58 ? 1 DG A N7 1 ATOM 12 C C5 . DG A 1 1 ? 19.536 2.966 12.981 1.00 19.40 ? 1 DG A C5 1 ATOM 13 C C6 . DG A 1 1 ? 20.707 3.665 13.377 1.00 23.54 ? 1 DG A C6 1 ATOM 14 O O6 . DG A 1 1 ? 21.805 3.721 12.807 1.00 22.84 ? 1 DG A O6 1 ATOM 15 N N1 . DG A 1 1 ? 20.566 4.285 14.582 1.00 21.33 ? 1 DG A N1 1 ATOM 16 C C2 . DG A 1 1 ? 19.438 4.257 15.343 1.00 19.18 ? 1 DG A C2 1 ATOM 17 N N2 . DG A 1 1 ? 19.493 4.947 16.468 1.00 20.89 ? 1 DG A N2 1 ATOM 18 N N3 . DG A 1 1 ? 18.308 3.639 15.002 1.00 20.44 ? 1 DG A N3 1 ATOM 19 C C4 . DG A 1 1 ? 18.427 3.033 13.797 1.00 16.20 ? 1 DG A C4 1 ATOM 20 P P . DT A 1 2 ? 13.252 5.651 12.284 1.00 28.20 ? 2 DT A P 1 ATOM 21 O OP1 . DT A 1 2 ? 11.742 5.971 12.284 1.00 32.70 ? 2 DT A OP1 1 ATOM 22 O OP2 . DT A 1 2 ? 13.793 5.780 10.929 1.00 22.65 ? 2 DT A OP2 1 ATOM 23 O "O5'" . DT A 1 2 ? 13.989 6.316 13.473 1.00 27.10 ? 2 DT A "O5'" 1 ATOM 24 C "C5'" . DT A 1 2 ? 13.478 6.437 14.820 1.00 27.79 ? 2 DT A "C5'" 1 ATOM 25 C "C4'" . DT A 1 2 ? 14.499 7.256 15.573 1.00 29.42 ? 2 DT A "C4'" 1 ATOM 26 O "O4'" . DT A 1 2 ? 15.725 6.552 15.684 1.00 29.98 ? 2 DT A "O4'" 1 ATOM 27 C "C3'" . DT A 1 2 ? 14.875 8.575 14.899 1.00 30.69 ? 2 DT A "C3'" 1 ATOM 28 O "O3'" . DT A 1 2 ? 13.895 9.582 15.137 1.00 36.37 ? 2 DT A "O3'" 1 ATOM 29 C "C2'" . DT A 1 2 ? 16.226 8.878 15.541 1.00 24.94 ? 2 DT A "C2'" 1 ATOM 30 C "C1'" . DT A 1 2 ? 16.822 7.492 15.660 1.00 23.54 ? 2 DT A "C1'" 1 ATOM 31 N N1 . DT A 1 2 ? 17.703 7.228 14.511 1.00 24.81 ? 2 DT A N1 1 ATOM 32 C C2 . DT A 1 2 ? 19.011 7.719 14.598 1.00 24.46 ? 2 DT A C2 1 ATOM 33 O O2 . DT A 1 2 ? 19.367 8.308 15.612 1.00 23.61 ? 2 DT A O2 1 ATOM 34 N N3 . DT A 1 2 ? 19.856 7.478 13.544 1.00 20.20 ? 2 DT A N3 1 ATOM 35 C C4 . DT A 1 2 ? 19.450 6.818 12.434 1.00 23.45 ? 2 DT A C4 1 ATOM 36 O O4 . DT A 1 2 ? 20.292 6.622 11.507 1.00 21.65 ? 2 DT A O4 1 ATOM 37 C C5 . DT A 1 2 ? 18.107 6.333 12.347 1.00 24.34 ? 2 DT A C5 1 ATOM 38 C C7 . DT A 1 2 ? 17.661 5.606 11.111 1.00 24.32 ? 2 DT A C7 1 ATOM 39 C C6 . DT A 1 2 ? 17.292 6.566 13.393 1.00 22.49 ? 2 DT A C6 1 ATOM 40 P P . DG A 1 3 ? 13.728 10.786 14.122 1.00 36.37 ? 3 DG A P 1 ATOM 41 O OP1 . DG A 1 3 ? 12.694 11.527 14.986 1.00 38.23 ? 3 DG A OP1 1 ATOM 42 O OP2 . DG A 1 3 ? 13.726 10.609 12.720 1.00 29.47 ? 3 DG A OP2 1 ATOM 43 O "O5'" . DG A 1 3 ? 15.170 11.695 14.265 1.00 37.92 ? 3 DG A "O5'" 1 ATOM 44 C "C5'" . DG A 1 3 ? 15.409 12.267 15.565 1.00 31.96 ? 3 DG A "C5'" 1 ATOM 45 C "C4'" . DG A 1 3 ? 16.807 12.860 15.573 1.00 26.80 ? 3 DG A "C4'" 1 ATOM 46 O "O4'" . DG A 1 3 ? 17.741 11.804 15.438 1.00 25.93 ? 3 DG A "O4'" 1 ATOM 47 C "C3'" . DG A 1 3 ? 17.183 13.830 14.455 1.00 25.45 ? 3 DG A "C3'" 1 ATOM 48 O "O3'" . DG A 1 3 ? 16.714 15.149 14.701 1.00 32.22 ? 3 DG A "O3'" 1 ATOM 49 C "C2'" . DG A 1 3 ? 18.713 13.774 14.455 1.00 26.40 ? 3 DG A "C2'" 1 ATOM 50 C "C1'" . DG A 1 3 ? 18.901 12.282 14.764 1.00 25.98 ? 3 DG A "C1'" 1 ATOM 51 N N9 . DG A 1 3 ? 19.054 11.471 13.536 1.00 20.81 ? 3 DG A N9 1 ATOM 52 C C8 . DG A 1 3 ? 18.184 10.721 12.815 1.00 19.02 ? 3 DG A C8 1 ATOM 53 N N7 . DG A 1 3 ? 18.714 10.124 11.761 1.00 18.70 ? 3 DG A N7 1 ATOM 54 C C5 . DG A 1 3 ? 20.064 10.514 11.824 1.00 22.24 ? 3 DG A C5 1 ATOM 55 C C6 . DG A 1 3 ? 21.193 10.191 11.040 1.00 23.22 ? 3 DG A C6 1 ATOM 56 O O6 . DG A 1 3 ? 21.251 9.490 10.017 1.00 20.04 ? 3 DG A O6 1 ATOM 57 N N1 . DG A 1 3 ? 22.348 10.811 11.444 1.00 19.41 ? 3 DG A N1 1 ATOM 58 C C2 . DG A 1 3 ? 22.439 11.602 12.545 1.00 22.11 ? 3 DG A C2 1 ATOM 59 N N2 . DG A 1 3 ? 23.675 12.071 12.831 1.00 20.46 ? 3 DG A N2 1 ATOM 60 N N3 . DG A 1 3 ? 21.421 11.911 13.346 1.00 20.88 ? 3 DG A N3 1 ATOM 61 C C4 . DG A 1 3 ? 20.282 11.336 12.910 1.00 21.91 ? 3 DG A C4 1 ATOM 62 P P . DT A 1 4 ? 16.783 16.336 13.742 1.00 29.22 ? 4 DT A P 1 ATOM 63 O OP1 . DT A 1 4 ? 16.142 17.515 14.439 1.00 33.80 ? 4 DT A OP1 1 ATOM 64 O OP2 . DT A 1 4 ? 16.190 16.055 12.395 1.00 28.46 ? 4 DT A OP2 1 ATOM 65 O "O5'" . DT A 1 4 ? 18.327 16.653 13.465 1.00 28.50 ? 4 DT A "O5'" 1 ATOM 66 C "C5'" . DT A 1 4 ? 19.181 17.329 14.400 1.00 24.06 ? 4 DT A "C5'" 1 ATOM 67 C "C4'" . DT A 1 4 ? 20.555 17.442 13.758 1.00 30.31 ? 4 DT A "C4'" 1 ATOM 68 O "O4'" . DT A 1 4 ? 21.130 16.171 13.512 1.00 24.88 ? 4 DT A "O4'" 1 ATOM 69 C "C3'" . DT A 1 4 ? 20.579 18.107 12.379 1.00 26.24 ? 4 DT A "C3'" 1 ATOM 70 O "O3'" . DT A 1 4 ? 20.431 19.540 12.466 1.00 30.67 ? 4 DT A "O3'" 1 ATOM 71 C "C2'" . DT A 1 4 ? 21.922 17.649 11.832 1.00 19.06 ? 4 DT A "C2'" 1 ATOM 72 C "C1'" . DT A 1 4 ? 22.004 16.221 12.355 1.00 25.55 ? 4 DT A "C1'" 1 ATOM 73 N N1 . DT A 1 4 ? 21.543 15.202 11.396 1.00 21.10 ? 4 DT A N1 1 ATOM 74 C C2 . DT A 1 4 ? 22.447 14.636 10.509 1.00 25.06 ? 4 DT A C2 1 ATOM 75 O O2 . DT A 1 4 ? 23.608 15.043 10.501 1.00 24.67 ? 4 DT A O2 1 ATOM 76 N N3 . DT A 1 4 ? 21.979 13.690 9.645 1.00 14.21 ? 4 DT A N3 1 ATOM 77 C C4 . DT A 1 4 ? 20.665 13.300 9.629 1.00 19.63 ? 4 DT A C4 1 ATOM 78 O O4 . DT A 1 4 ? 20.336 12.411 8.789 1.00 18.99 ? 4 DT A O4 1 ATOM 79 C C5 . DT A 1 4 ? 19.753 13.898 10.532 1.00 25.24 ? 4 DT A C5 1 ATOM 80 C C7 . DT A 1 4 ? 18.293 13.513 10.580 1.00 20.65 ? 4 DT A C7 1 ATOM 81 C C6 . DT A 1 4 ? 20.232 14.812 11.388 1.00 21.16 ? 4 DT A C6 1 ATOM 82 P P . DA A 1 5 ? 19.981 20.259 11.174 1.00 28.58 ? 5 DA A P 1 ATOM 83 O OP1 . DA A 1 5 ? 19.636 21.698 11.539 1.00 31.09 ? 5 DA A OP1 1 ATOM 84 O OP2 . DA A 1 5 ? 18.771 19.616 10.548 1.00 25.58 ? 5 DA A OP2 1 ATOM 85 O "O5'" . DA A 1 5 ? 21.126 20.346 10.049 1.00 22.54 ? 5 DA A "O5'" 1 ATOM 86 C "C5'" . DA A 1 5 ? 22.450 20.882 10.366 1.00 18.61 ? 5 DA A "C5'" 1 ATOM 87 C "C4'" . DA A 1 5 ? 23.430 20.436 9.304 1.00 23.30 ? 5 DA A "C4'" 1 ATOM 88 O "O4'" . DA A 1 5 ? 23.611 19.021 9.391 1.00 17.93 ? 5 DA A "O4'" 1 ATOM 89 C "C3'" . DA A 1 5 ? 23.019 20.643 7.854 1.00 23.42 ? 5 DA A "C3'" 1 ATOM 90 O "O3'" . DA A 1 5 ? 23.239 21.973 7.394 1.00 22.95 ? 5 DA A "O3'" 1 ATOM 91 C "C2'" . DA A 1 5 ? 23.889 19.630 7.109 1.00 21.87 ? 5 DA A "C2'" 1 ATOM 92 C "C1'" . DA A 1 5 ? 23.931 18.485 8.091 1.00 20.92 ? 5 DA A "C1'" 1 ATOM 93 N N9 . DA A 1 5 ? 22.918 17.472 7.711 1.00 18.72 ? 5 DA A N9 1 ATOM 94 C C8 . DA A 1 5 ? 21.630 17.385 8.210 1.00 19.55 ? 5 DA A C8 1 ATOM 95 N N7 . DA A 1 5 ? 20.948 16.378 7.711 1.00 16.28 ? 5 DA A N7 1 ATOM 96 C C5 . DA A 1 5 ? 21.876 15.780 6.839 1.00 18.71 ? 5 DA A C5 1 ATOM 97 C C6 . DA A 1 5 ? 21.758 14.672 5.968 1.00 17.25 ? 5 DA A C6 1 ATOM 98 N N6 . DA A 1 5 ? 20.653 13.948 5.849 1.00 19.43 ? 5 DA A N6 1 ATOM 99 N N1 . DA A 1 5 ? 22.857 14.408 5.231 1.00 18.86 ? 5 DA A N1 1 ATOM 100 C C2 . DA A 1 5 ? 24.008 15.135 5.302 1.00 24.00 ? 5 DA A C2 1 ATOM 101 N N3 . DA A 1 5 ? 24.177 16.173 6.110 1.00 20.27 ? 5 DA A N3 1 ATOM 102 C C4 . DA A 1 5 ? 23.072 16.443 6.831 1.00 17.80 ? 5 DA A C4 1 ATOM 103 P P . DC A 1 6 ? 22.249 22.638 6.253 1.00 27.71 ? 6 DC A P 1 ATOM 104 O OP1 . DC A 1 6 ? 22.657 24.097 6.253 1.00 23.44 ? 6 DC A OP1 1 ATOM 105 O OP2 . DC A 1 6 ? 20.867 22.400 6.697 1.00 28.72 ? 6 DC A OP2 1 ATOM 106 O "O5'" . DC A 1 6 ? 22.727 21.883 4.985 1.00 25.05 ? 6 DC A "O5'" 1 ATOM 107 C "C5'" . DC A 1 6 ? 24.025 22.178 4.430 1.00 20.89 ? 6 DC A "C5'" 1 ATOM 108 C "C4'" . DC A 1 6 ? 24.292 21.137 3.368 1.00 22.51 ? 6 DC A "C4'" 1 ATOM 109 O "O4'" . DC A 1 6 ? 24.200 19.832 3.923 1.00 21.77 ? 6 DC A "O4'" 1 ATOM 110 C "C3'" . DC A 1 6 ? 23.300 21.148 2.195 1.00 22.34 ? 6 DC A "C3'" 1 ATOM 111 O "O3'" . DC A 1 6 ? 23.532 22.268 1.355 1.00 26.54 ? 6 DC A "O3'" 1 ATOM 112 C "C2'" . DC A 1 6 ? 23.608 19.768 1.609 1.00 15.51 ? 6 DC A "C2'" 1 ATOM 113 C "C1'" . DC A 1 6 ? 23.795 18.946 2.877 1.00 20.21 ? 6 DC A "C1'" 1 ATOM 114 N N1 . DC A 1 6 ? 22.533 18.309 3.289 1.00 22.87 ? 6 DC A N1 1 ATOM 115 C C2 . DC A 1 6 ? 22.309 17.029 2.774 1.00 16.76 ? 6 DC A C2 1 ATOM 116 O O2 . DC A 1 6 ? 23.121 16.538 1.989 1.00 20.80 ? 6 DC A O2 1 ATOM 117 N N3 . DC A 1 6 ? 21.138 16.409 3.115 1.00 21.53 ? 6 DC A N3 1 ATOM 118 C C4 . DC A 1 6 ? 20.232 16.990 3.955 1.00 24.31 ? 6 DC A C4 1 ATOM 119 N N4 . DC A 1 6 ? 19.110 16.336 4.264 1.00 16.50 ? 6 DC A N4 1 ATOM 120 C C5 . DC A 1 6 ? 20.496 18.295 4.486 1.00 18.81 ? 6 DC A C5 1 ATOM 121 C C6 . DC A 1 6 ? 21.635 18.881 4.121 1.00 17.60 ? 6 DC A C6 1 ATOM 122 P P . DA A 1 7 ? 22.677 22.795 0.111 1.00 28.97 ? 7 DA A P 1 ATOM 123 O OP1 . DA A 1 7 ? 23.257 24.080 -0.230 1.00 28.25 ? 7 DA A OP1 1 ATOM 124 O OP2 . DA A 1 7 ? 21.300 22.818 0.793 1.00 25.00 ? 7 DA A OP2 1 ATOM 125 O "O5'" . DA A 1 7 ? 22.691 21.732 -1.046 1.00 21.20 ? 7 DA A "O5'" 1 ATOM 126 C "C5'" . DA A 1 7 ? 23.939 21.339 -1.648 1.00 27.11 ? 7 DA A "C5'" 1 ATOM 127 C "C4'" . DA A 1 7 ? 23.579 20.267 -2.639 1.00 23.11 ? 7 DA A "C4'" 1 ATOM 128 O "O4'" . DA A 1 7 ? 22.986 19.156 -1.997 1.00 24.60 ? 7 DA A "O4'" 1 ATOM 129 C "C3'" . DA A 1 7 ? 22.563 20.719 -3.701 1.00 32.13 ? 7 DA A "C3'" 1 ATOM 130 O "O3'" . DA A 1 7 ? 22.980 20.222 -4.969 1.00 30.23 ? 7 DA A "O3'" 1 ATOM 131 C "C2'" . DA A 1 7 ? 21.237 20.166 -3.210 1.00 27.76 ? 7 DA A "C2'" 1 ATOM 132 C "C1'" . DA A 1 7 ? 21.684 18.870 -2.528 1.00 23.96 ? 7 DA A "C1'" 1 ATOM 133 N N9 . DA A 1 7 ? 20.718 18.483 -1.474 1.00 20.05 ? 7 DA A N9 1 ATOM 134 C C8 . DA A 1 7 ? 20.325 19.215 -0.396 1.00 20.91 ? 7 DA A C8 1 ATOM 135 N N7 . DA A 1 7 ? 19.469 18.620 0.380 1.00 21.13 ? 7 DA A N7 1 ATOM 136 C C5 . DA A 1 7 ? 19.297 17.380 -0.230 1.00 19.72 ? 7 DA A C5 1 ATOM 137 C C6 . DA A 1 7 ? 18.500 16.280 0.159 1.00 21.69 ? 7 DA A C6 1 ATOM 138 N N6 . DA A 1 7 ? 17.710 16.336 1.228 1.00 20.56 ? 7 DA A N6 1 ATOM 139 N N1 . DA A 1 7 ? 18.607 15.180 -0.642 1.00 21.50 ? 7 DA A N1 1 ATOM 140 C C2 . DA A 1 7 ? 19.414 15.186 -1.736 1.00 21.38 ? 7 DA A C2 1 ATOM 141 N N3 . DA A 1 7 ? 20.182 16.196 -2.148 1.00 21.29 ? 7 DA A N3 1 ATOM 142 C C4 . DA A 1 7 ? 20.077 17.265 -1.347 1.00 21.39 ? 7 DA A C4 1 ATOM 143 P P . DC A 1 8 ? 22.220 20.652 -6.388 1.00 39.42 ? 8 DC A P 1 ATOM 144 O OP1 . DC A 1 8 ? 23.164 20.346 -7.378 1.00 33.19 ? 8 DC A OP1 1 ATOM 145 O OP2 . DC A 1 8 ? 21.570 21.968 -6.086 1.00 37.13 ? 8 DC A OP2 1 ATOM 146 O "O5'" . DC A 1 8 ? 20.917 19.602 -6.411 1.00 29.44 ? 8 DC A "O5'" 1 ATOM 147 C "C5'" . DC A 1 8 ? 21.366 18.281 -6.863 1.00 25.85 ? 8 DC A "C5'" 1 ATOM 148 C "C4'" . DC A 1 8 ? 20.140 17.402 -6.673 1.00 31.16 ? 8 DC A "C4'" 1 ATOM 149 O "O4'" . DC A 1 8 ? 19.772 17.377 -5.318 1.00 28.88 ? 8 DC A "O4'" 1 ATOM 150 C "C3'" . DC A 1 8 ? 18.891 17.888 -7.410 1.00 27.09 ? 8 DC A "C3'" 1 ATOM 151 O "O3'" . DC A 1 8 ? 18.836 17.343 -8.725 1.00 38.48 ? 8 DC A "O3'" 1 ATOM 152 C "C2'" . DC A 1 8 ? 17.734 17.416 -6.522 1.00 37.16 ? 8 DC A "C2'" 1 ATOM 153 C "C1'" . DC A 1 8 ? 18.384 16.993 -5.223 1.00 26.19 ? 8 DC A "C1'" 1 ATOM 154 N N1 . DC A 1 8 ? 17.750 17.624 -4.050 1.00 23.46 ? 8 DC A N1 1 ATOM 155 C C2 . DC A 1 8 ? 16.812 16.847 -3.392 1.00 21.83 ? 8 DC A C2 1 ATOM 156 O O2 . DC A 1 8 ? 16.518 15.741 -3.836 1.00 22.89 ? 8 DC A O2 1 ATOM 157 N N3 . DC A 1 8 ? 16.176 17.343 -2.298 1.00 24.34 ? 8 DC A N3 1 ATOM 158 C C4 . DC A 1 8 ? 16.454 18.595 -1.831 1.00 22.88 ? 8 DC A C4 1 ATOM 159 N N4 . DC A 1 8 ? 15.879 19.069 -0.721 1.00 22.63 ? 8 DC A N4 1 ATOM 160 C C5 . DC A 1 8 ? 17.447 19.372 -2.496 1.00 26.75 ? 8 DC A C5 1 ATOM 161 C C6 . DC A 1 8 ? 18.047 18.873 -3.598 1.00 19.38 ? 8 DC A C6 1 HETATM 162 O O . HOH B 2 . ? 14.538 4.355 8.844 0.77 35.97 ? 9 HOH A O 1 HETATM 163 O O . HOH B 2 . ? 17.177 2.214 17.205 0.87 35.52 ? 10 HOH A O 1 HETATM 164 O O . HOH B 2 . ? 20.806 1.305 9.962 0.79 48.30 ? 11 HOH A O 1 HETATM 165 O O . HOH B 2 . ? 17.682 4.947 18.854 0.96 57.40 ? 12 HOH A O 1 HETATM 166 O O . HOH B 2 . ? 15.688 0.022 7.917 0.74 62.85 ? 13 HOH A O 1 HETATM 167 O O . HOH B 2 . ? 21.230 4.913 8.836 1.00 51.34 ? 14 HOH A O 1 HETATM 168 O O . HOH B 2 . ? 18.633 9.697 17.522 0.58 50.77 ? 15 HOH A O 1 HETATM 169 O O . HOH B 2 . ? 19.826 7.077 8.947 0.80 34.32 ? 16 HOH A O 1 HETATM 170 O O . HOH B 2 . ? 10.524 6.656 10.081 0.88 53.66 ? 17 HOH A O 1 HETATM 171 O O . HOH B 2 . ? 14.742 8.328 10.778 0.96 36.71 ? 18 HOH A O 1 HETATM 172 O O . HOH B 2 . ? 17.355 9.066 9.938 1.00 40.03 ? 19 HOH A O 1 HETATM 173 O O . HOH B 2 . ? 22.123 13.384 15.216 0.80 35.45 ? 20 HOH A O 1 HETATM 174 O O . HOH B 2 . ? 19.365 9.260 7.965 1.00 48.00 ? 21 HOH A O 1 HETATM 175 O O . HOH B 2 . ? 14.961 12.248 10.873 0.81 48.66 ? 22 HOH A O 1 HETATM 176 O O . HOH B 2 . ? 10.467 9.375 13.354 0.97 73.22 ? 23 HOH A O 1 HETATM 177 O O . HOH B 2 . ? 12.500 14.175 13.861 0.90 72.66 ? 24 HOH A O 1 HETATM 178 O O . HOH B 2 . ? 12.612 9.554 9.019 0.52 68.85 ? 25 HOH A O 1 HETATM 179 O O . HOH B 2 . ? 18.201 11.468 7.782 1.00 35.91 ? 26 HOH A O 1 HETATM 180 O O . HOH B 2 . ? 14.267 14.717 11.333 0.92 63.96 ? 27 HOH A O 1 HETATM 181 O O . HOH B 2 . ? 20.832 15.811 17.284 0.62 58.03 ? 28 HOH A O 1 HETATM 182 O O . HOH B 2 . ? 16.380 16.810 16.960 1.00 64.38 ? 29 HOH A O 1 HETATM 183 O O . HOH B 2 . ? 15.466 11.541 8.535 0.70 62.58 ? 30 HOH A O 1 HETATM 184 O O . HOH B 2 . ? 17.316 17.338 10.192 1.00 36.43 ? 31 HOH A O 1 HETATM 185 O O . HOH B 2 . ? 18.314 16.451 7.798 0.97 31.07 ? 32 HOH A O 1 HETATM 186 O O . HOH B 2 . ? 26.518 17.562 5.080 0.90 41.76 ? 33 HOH A O 1 HETATM 187 O O . HOH B 2 . ? 20.833 7.846 6.527 0.95 38.11 ? 34 HOH A O 1 HETATM 188 O O . HOH B 2 . ? 20.543 22.024 13.980 0.72 44.66 ? 35 HOH A O 1 HETATM 189 O O . HOH B 2 . ? 14.792 14.841 7.893 0.96 58.62 ? 36 HOH A O 1 HETATM 190 O O . HOH B 2 . ? 19.934 24.229 10.683 0.66 62.08 ? 37 HOH A O 1 HETATM 191 O O . HOH B 2 . ? 19.207 21.954 4.129 0.83 44.83 ? 38 HOH A O 1 HETATM 192 O O . HOH B 2 . ? 18.807 20.346 7.450 0.89 30.54 ? 39 HOH A O 1 HETATM 193 O O . HOH B 2 . ? 17.349 18.062 6.237 0.91 52.83 ? 40 HOH A O 1 HETATM 194 O O . HOH B 2 . ? 27.551 20.407 4.961 0.89 40.26 ? 41 HOH A O 1 HETATM 195 O O . HOH B 2 . ? 21.499 25.604 3.479 0.70 35.00 ? 42 HOH A O 1 HETATM 196 O O . HOH B 2 . ? 19.278 26.488 6.776 0.80 39.14 ? 43 HOH A O 1 HETATM 197 O O . HOH B 2 . ? 22.199 25.935 8.028 0.63 60.73 ? 44 HOH A O 1 HETATM 198 O O . HOH B 2 . ? 21.601 14.944 -4.192 0.93 29.84 ? 45 HOH A O 1 HETATM 199 O O . HOH B 2 . ? 18.189 20.135 2.274 0.88 33.67 ? 46 HOH A O 1 HETATM 200 O O . HOH B 2 . ? 22.016 26.454 0.697 1.00 59.43 ? 47 HOH A O 1 HETATM 201 O O . HOH B 2 . ? 16.658 18.791 3.424 0.88 41.61 ? 48 HOH A O 1 HETATM 202 O O . HOH B 2 . ? 19.074 22.515 -1.308 0.97 52.27 ? 49 HOH A O 1 HETATM 203 O O . HOH B 2 . ? 22.789 24.240 -2.869 0.89 57.65 ? 50 HOH A O 1 HETATM 204 O O . HOH B 2 . ? 8.656 6.254 12.931 0.79 59.98 ? 51 HOH A O 1 HETATM 205 O O . HOH B 2 . ? 17.347 15.522 -9.565 0.95 36.03 ? 52 HOH A O 1 HETATM 206 O O . HOH B 2 . ? 19.709 22.975 -8.068 1.00 65.46 ? 53 HOH A O 1 HETATM 207 O O . HOH B 2 . ? 24.708 18.547 -6.879 1.00 82.87 ? 54 HOH A O 1 HETATM 208 O O . HOH B 2 . ? 16.508 21.611 0.277 0.81 49.75 ? 55 HOH A O 1 HETATM 209 O O . HOH B 2 . ? 22.458 19.302 -10.033 0.99 69.07 ? 56 HOH A O 1 HETATM 210 O O . HOH B 2 . ? 25.670 25.247 1.733 0.74 56.66 ? 57 HOH A O 1 HETATM 211 O O . HOH B 2 . ? 20.848 16.328 -10.017 0.78 62.95 ? 58 HOH A O 1 #