0.012623
0.000000
0.000000
0.000000
0.012623
0.000000
0.000000
0.000000
0.012623
0.00000
0.00000
0.00000
Yadav, M.K.
Leman, L.J.
Stout, C.D.
Ghadiri, M.R.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
48
90.00
90.00
90.00
79.222
79.222
79.222
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Biochemistry
BICHAW
0033
0006-2960
44
9723
10.1021/BI050742A
16008357
Structure-Based Engineering of Internal Cavities in Coiled-Coil Peptides
2005
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
93.0
1
CONFOCAL
2004-07-05
NI FILTER
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
N TERMINUS IS CAPPED WITH ABA.
4046.800
GENERAL CONTROL PROTEIN GCN4
2
syn
polymer
18.015
water
3
nat
water
AMINO ACID BIOSYNTHESIS REGULATORY PROTEIN, ABA-PLI
no
no
RMKQIEDKLEEILSKLYHIENELARIKKLLGER
RMKQIEDKLEEILSKLYHIENELARIKKLLGER
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
1
2.6
52.1
VAPOR DIFFUSION, HANGING DROP
HANGING DROP, 1 UL OF 10MG/ML PEPTIDE IN WATER TO 1UL OF 2M NACL 10% PEG 6K.
database_PDB_rev
database_PDB_rev_record
exptl_crystal_grow
pdbx_database_proc
pdbx_database_status
repository
Initial release
Version format compliance
Version format compliance
Data collection
Experimental preparation
Other
1
0
2004-09-24
1
1
2011-05-08
1
2
2011-07-13
1
3
2019-05-08
_exptl_crystal_grow.method
_pdbx_database_status.recvd_author_approval
HELIX CAPPING IN THE GCN4 LEUCINE ZIPPER
GCN4 LEUCINE ZIPPER COMPLEXED WITH SPECIFIC ATF/CREB SITE DEOXYRIBONUCLEIC ACID
ATOMIC STRUCTURE OF THE ECTODOMAIN FROM HIV -1 GP41
THE STRUCTURE OF AN HIV-1 SPECIFIC CELL ENTRY INHIBITOR INCOMPLEX WITH THE HIV-1 GP41 TRIMERIC CORE
GCN4 LEUCINE ZIPPER CORE MUTANT P-LI
GCN4 LEUCINE ZIPPER CORE MUTANT P-LI
HUMAN VIMENTIN COIL 2B FRAGMENT LINKED TO GCN4 LEUCINE ZIPPER (Z2B)
CRYSTAL STRUCTURE OF C14LINKMID/IQN17: A CROSS-LINKED INHIBITOR OF HIV-1 ENTRY BOUND TO THE GP41 HYDROPHOBIC POCKET
GLYTM1BZIP: A CHIMERIC PEPTIDE MODEL OF THE N-TERMINUS OF ARAT SHORT ALPHA TROPOMYOSIN WITH THE N-TERMINUS ENCODED BYEXON 1B
COILED COIL TRIMER GCN4-PVLS SER AT BURIED D POSITION
GCN4-PVLT COILED-COIL TRIMER WITH THREONINE AT THE D(12)POSITION
GCN4-PVTL COILED-COIL TRIMER WITH THREONINE AT THE A(16)POSITION
GCN4-PVSL COILED-COIL TRIMER WITH SERINE AT THE A(16)POSITION
CRYSTAL STRUCTURE OF THE C-TERMINAL REGION OF STRIATEDMUSCLE ALPHA-TROPOMYOSIN AT 2.7 ANGSTROM RESOLUTION
PLACEMENT OF THE STRUCTURAL PROTEINS IN SINDBIS VIRUS
CRYSTAL STRUCTURE OF A ZIF23-GCN4 CHIMERA BOUND TO DNA
VISUALIZING AN UNSTABLE COILED COIL: THE CRYSTAL STRUCTUREOF AN N-TERMINAL SEGMENT OF THE SCALLOP MYOSIN ROD
CRYSTAL STRUCTURE OF GCN4-PIQ, A TRIMERIC COILED COIL WITH BURIED POLAR RESIDUES
GCN4-LEUCINE ZIPPER CORE MUTANT AS N16A TRIGONAL AUTOMATICSOLUTION
ANTIPARALLEL TRIMER OF GCN4-LEUCINE ZIPPER CORE MUTANT ASN16A TETRAGONAL AUTOMATIC SOLUTION
ANTIPARALLEL TRIMER OF GCN4-LEUCINE ZIPPER CORE MUTANT ASN16A TRIGONAL FORM
ANTIPARALLEL TRIMER OF GCN4-LEUCINE ZIPPER CORE MUTANT ASN16A TETRAGONAL FORM
GCN4-LEUCINE ZIPPER CORE MUTANT AS N16A COMPLEXED WITH BENZENE
TMZIP: A CHIMERIC PEPTIDE MODEL OF THE N- TERMINUS OF ALPHA TROPOMYOSIN, NMR, 15 STRUCTURES
CRYSTAL STRUCTURE OF B562RIL, A REDESIGNED FOUR HELIX BUNDLE
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
STRUCTURE BASED ENGINEERING OF INTERNAL MOLECULAR SURFACES OF FOUR HELIX BUNDLES
AN ANTI-PARALLEL FOUR HELIX BUNDLE MUTANT PLI-E20C
GCN4 (BASIC REGION, LEUCINE ZIPPER) COMPLEX WITH AP-1 DEOXYRIBONUCLEIC ACID
GCN4-LEUCINE ZIPPER CORE MUTANT ASN16ABA IN THE DIMERIC STATE
GCN4-LEUCINE ZIPPER CORE MUTANT ASN16ABA IN THE TRIMERIC STATE
GCN4-LEUCINE ZIPPER CORE MUTANT ASN16LYS IN THE DIMERIC STATE
GCN4-LEUCINE ZIPPER CORE MUTANT ASN16GLN IN THE DIMERIC STATE
GCN4-LEUCINE ZIPPER CORE MUTANT ASN16GLN IN THE TRIMERIC STATE
LEUCINE ZIPPER MONOMER (NMR, 20 STRUCTURES)
GCN4 BASIC DOMAIN, LEUCINE ZIPPER COMPLEXED WITH ATF/CREB SITE DEOXYRIBONUCLEIC ACID
GCN4 LEUCINE ZIPPER
AN ANTI-PARALLEL FOUR HELIX BUNDLE.
AN ANTI-PARALLEL FOUR HELIX BUNDLE.
AN ANTI-PARALLEL FOUR HELIX BUNDLE
AN ANTI-PARALLEL FOUR HELIX BUNDLE
AN ANTI-PARALLEL TO PARALLEL SWITCH.
PDBE
Y
PDBE
2004-08-07
REL
HOH
water
4932
BAKER'S YEAST
SACCHAROMYCES CEREVISIAE
sample
N-TERMINUS IS CAPPED WITH ABA.
HOH
2001
2
HOH
HOH
2001
B
HOH
2002
2
HOH
HOH
2002
B
HOH
2003
2
HOH
HOH
2003
B
ARG
1
n
1
ARG
1
A
MET
2
n
2
MET
2
A
LYS
3
n
3
LYS
3
A
GLN
4
n
4
GLN
4
A
ILE
5
n
5
ILE
5
A
GLU
6
n
6
GLU
6
A
ASP
7
n
7
ASP
7
A
LYS
8
n
8
LYS
8
A
LEU
9
n
9
LEU
9
A
GLU
10
n
10
GLU
10
A
GLU
11
n
11
GLU
11
A
ILE
12
n
12
ILE
12
A
LEU
13
n
13
LEU
13
A
SER
14
n
14
SER
14
A
LYS
15
n
15
LYS
15
A
LEU
16
n
16
LEU
16
A
TYR
17
n
17
TYR
17
A
HIS
18
n
18
HIS
18
A
ILE
19
n
19
ILE
19
A
GLU
20
n
20
GLU
20
A
ASN
21
n
21
ASN
21
A
GLU
22
n
22
GLU
22
A
LEU
23
n
23
LEU
23
A
ALA
24
n
24
ALA
24
A
ARG
25
n
25
ARG
25
A
ILE
26
n
26
ILE
26
A
LYS
27
n
27
LYS
27
A
LYS
28
n
28
LYS
28
A
LEU
29
n
29
LEU
29
A
LEU
30
n
30
LEU
30
A
GLY
31
n
31
GLY
31
A
GLU
32
n
32
GLU
32
A
n
33
33
A
ARG
1
n
1
ARG
1
B
MET
2
n
2
MET
2
B
LYS
3
n
3
LYS
3
B
GLN
4
n
4
GLN
4
B
ILE
5
n
5
ILE
5
B
GLU
6
n
6
GLU
6
B
ASP
7
n
7
ASP
7
B
LYS
8
n
8
LYS
8
B
LEU
9
n
9
LEU
9
B
GLU
10
n
10
GLU
10
B
GLU
11
n
11
GLU
11
B
ILE
12
n
12
ILE
12
B
LEU
13
n
13
LEU
13
B
SER
14
n
14
SER
14
B
LYS
15
n
15
LYS
15
B
LEU
16
n
16
LEU
16
B
TYR
17
n
17
TYR
17
B
HIS
18
n
18
HIS
18
B
ILE
19
n
19
ILE
19
B
GLU
20
n
20
GLU
20
B
ASN
21
n
21
ASN
21
B
GLU
22
n
22
GLU
22
B
LEU
23
n
23
LEU
23
B
ALA
24
n
24
ALA
24
B
ARG
25
n
25
ARG
25
B
ILE
26
n
26
ILE
26
B
LYS
27
n
27
LYS
27
B
LYS
28
n
28
LYS
28
B
LEU
29
n
29
LEU
29
B
LEU
30
n
30
LEU
30
B
GLY
31
n
31
GLY
31
B
GLU
32
n
32
GLU
32
B
ARG
33
n
33
ARG
33
B
author_and_software_defined_assembly
PQS
4
tetrameric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
-1.0000000000
0.0000000000
19_655
-x+7/4,-z+3/4,-y+3/4
crystal symmetry operation
138.6385000000
59.4165000000
59.4165000000
1
B
CD
GLN
4
B
CD
GLN
4
1
Y
1
B
OE1
GLN
4
B
OE1
GLN
4
1
Y
1
B
NE2
GLN
4
B
NE2
GLN
4
1
Y
1
B
CD
LYS
28
B
CD
LYS
28
1
Y
1
B
CE
LYS
28
B
CE
LYS
28
1
Y
1
B
NZ
LYS
28
B
NZ
LYS
28
1
Y
1
B
CD
GLU
32
B
CD
GLU
32
1
Y
1
B
OE1
GLU
32
B
OE1
GLU
32
1
Y
1
B
OE2
GLU
32
B
OE2
GLU
32
1
Y
1
B
CD
ARG
33
B
CD
ARG
33
1
Y
1
B
NE
ARG
33
B
NE
ARG
33
1
Y
1
B
CZ
ARG
33
B
CZ
ARG
33
1
Y
1
B
NH1
ARG
33
B
NH1
ARG
33
1
Y
1
B
NH2
ARG
33
B
NH2
ARG
33
1
Y
1
A
ARG
33
A
ARG
33
1
Y
1
-12.85
1.70
111.00
98.15
A
A
A
CB
CG
CD1
LEU
LEU
LEU
13
13
13
N
1
-4.64
0.50
120.30
115.66
B
B
B
NE
CZ
NH1
ARG
ARG
ARG
1
1
1
N
1
6.56
0.90
118.30
124.86
B
B
B
CB
CG
OD2
ASP
ASP
ASP
7
7
7
N
1
9.41
1.20
123.30
132.71
B
B
B
OE1
CD
OE2
GLU
GLU
GLU
11
11
11
N
1
-12.42
2.00
118.30
105.88
B
B
B
CG
CD
OE2
GLU
GLU
GLU
11
11
11
N
1
-8.43
1.20
123.30
114.87
B
B
B
OE1
CD
OE2
GLU
GLU
GLU
22
22
22
N
1
3.14
0.50
120.30
123.44
B
B
B
NE
CZ
NH2
ARG
ARG
ARG
25
25
25
N
1
A
A
CG
OD1
ASN
ASN
21
21
0.147
0.022
1.235
1.382
N
1
A
A
CG
CD
ARG
ARG
25
25
0.171
0.025
1.515
1.686
N
1
B
B
CG
CD
GLU
GLU
10
10
0.139
0.015
1.515
1.654
N
1
B
B
CD
OE1
GLU
GLU
11
11
0.098
0.011
1.252
1.350
N
1
B
B
CD
OE2
GLU
GLU
22
22
-0.071
0.011
1.252
1.181
N
1
B
B
CD
CE
LYS
LYS
27
27
0.199
0.025
1.508
1.707
N
39.41
0.934
0.879
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.
0.295
0.231
0.234
2.30
55.90
189
3912
4.600
99.4
6.728
0.166
RANDOM
1
THROUGHOUT
MOLECULAR REPLACEMENT
0.302
0.257
0.80
0.80
1.40
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
2.30
55.90
3
542
0
0
539
0.048
0.022
541
0.003
0.020
542
3.313
2.027
715
1.245
3.000
1267
7.282
5.000
63
0.170
0.200
83
0.015
0.020
553
0.008
0.020
91
0.233
0.200
132
0.254
0.200
590
0.117
0.200
379
0.059
0.200
9
0.269
0.200
14
0.283
0.200
56
0.390
0.200
4
2.022
1.500
321
3.538
2.000
514
5.358
3.000
220
8.637
4.500
201
0.3480
0.2340
2.36
16
273
20
2.300
35.430
1W5I
3912
2.000
0.07000
1
14.0000
5.140
99.8
refinement
REFMAC
5.1.24
data reduction
CrystalClear
(MSC/RIGAKU)
data scaling
CrystalClear
(MSC/RIGAKU)
GENERAL CONTROL PROTEIN GCN4
ABA does not affect topology of pLI.
1
N
N
1
N
N
2
N
N
A
ARG
1
A
ARG
1
HELX_P
A
LEU
30
A
LEU
30
1
1
30
B
ARG
1
B
ARG
1
HELX_P
B
ARG
33
B
ARG
33
1
2
33
FOUR HELIX BUNDLE
FOUR HELIX BUNDLE, ABA
GCN4_YEAST
UNP
1
P03069
249
281
1W5I
1
33
P03069
A
1
1
33
249
281
1W5I
1
33
P03069
B
1
1
33
1
LEU
conflict
ILE
5
1W5I
A
P03069
UNP
253
5
1
VAL
conflict
LEU
9
1W5I
A
P03069
UNP
257
9
1
LEU
conflict
ILE
12
1W5I
A
P03069
UNP
260
12
1
ASN
conflict
LEU
16
1W5I
A
P03069
UNP
264
16
1
LEU
conflict
ILE
19
1W5I
A
P03069
UNP
267
19
1
VAL
conflict
LEU
23
1W5I
A
P03069
UNP
271
23
1
LEU
conflict
ILE
26
1W5I
A
P03069
UNP
274
26
1
VAL
conflict
LEU
30
1W5I
A
P03069
UNP
278
30
2
LEU
conflict
ILE
5
1W5I
B
P03069
UNP
253
5
2
VAL
conflict
LEU
9
1W5I
B
P03069
UNP
257
9
2
LEU
conflict
ILE
12
1W5I
B
P03069
UNP
260
12
2
ASN
conflict
LEU
16
1W5I
B
P03069
UNP
264
16
2
LEU
conflict
ILE
19
1W5I
B
P03069
UNP
267
19
2
VAL
conflict
LEU
23
1W5I
B
P03069
UNP
271
23
2
LEU
conflict
ILE
26
1W5I
B
P03069
UNP
274
26
2
VAL
conflict
LEU
30
1W5I
B
P03069
UNP
278
30
213
P 41 3 2