0.033267
0.000000
0.000000
0.000000
0.031949
0.000000
0.000000
0.000000
0.019346
0.00000
0.00000
0.00000
Glowka, M.L.
Olczak, A.
Bojarska, J.
Szczesio, M.
Duax, W.L.
Burkhart, B.M.
Pangborn, W.A.
Langs, D.A.
Wawrzak, Z.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
16
90.00
90.00
90.00
30.060
31.300
51.691
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
Cl -1
35.453
CHLORIDE ION
non-polymer
C6 H13 N O2
131.173
D-LEUCINE
D-peptide linking
C5 H11 N O2
117.146
D-VALINE
D-peptide linking
C2 H6 O
46.068
ETHANOL
non-polymer
C2 H7 N O
61.083
ETHANOLAMINE
L-peptide COOH carboxy terminus
C6 H11 N O3
145.156
n
N-formyl-L-valine
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
H2 O
18.015
WATER
non-polymer
Rb 1
85.468
RUBIDIUM ION
non-polymer
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
CL
N
15
N
N
N
16
R
C
N
17
N
C
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
C
N
22
N
O
N
23
N
O
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
N
N
38
R
C
N
39
N
C
N
40
N
C
N
41
N
C
N
42
N
C
N
43
N
O
N
44
N
O
N
45
N
H
N
46
N
H
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
C
N
57
N
C
N
58
N
O
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
C
N
66
N
N
N
67
N
C
N
68
N
O
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
C
N
77
N
N
N
78
N
O
N
79
S
C
N
80
N
C
N
81
N
C
N
82
N
C
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
O
N
93
N
C
N
94
N
H
N
95
N
O
N
96
N
H
N
97
N
N
N
98
N
C
N
99
N
C
N
100
N
O
N
101
N
O
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
O
N
108
N
H
N
109
N
H
N
110
N
RB
N
111
N
N
N
112
S
C
N
113
N
C
N
114
N
O
N
115
N
C
Y
116
N
C
Y
117
N
C
Y
118
N
C
Y
119
N
N
Y
120
N
C
Y
121
N
C
Y
122
N
C
Y
123
N
C
Y
124
N
C
N
125
N
O
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
N
N
139
S
C
N
140
N
C
N
141
N
O
N
142
N
C
Y
143
N
C
Y
144
N
C
Y
145
N
C
Y
146
N
C
Y
147
N
C
Y
148
N
C
N
149
N
O
N
150
N
O
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
N
N
163
S
C
N
164
N
C
N
165
N
O
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
doub
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
doub
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
doub
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
doub
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
doub
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
doub
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
Y
112
N
doub
Y
113
N
sing
Y
114
N
sing
N
115
N
sing
Y
116
N
doub
Y
117
N
sing
Y
118
N
sing
N
119
N
sing
Y
120
N
sing
Y
121
N
doub
N
122
N
sing
Y
123
N
doub
N
124
N
sing
Y
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
doub
Y
141
N
sing
Y
142
N
sing
N
143
N
sing
Y
144
N
doub
N
145
N
sing
Y
146
N
doub
N
147
N
sing
Y
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
doub
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
61
433
10.1107/S0907444905000399
15805598
Structure of Gramicidin D-Rbcl Complex at Atomic Resolution from Low-Temperature Synchrotron Data: Interactions of Double-Stranded Gramicidin Channel Contents and Cations with Channel Wall
2005
10.2210/pdb1w5u/pdb
pdb_00001w5u
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100.0
1
CCD
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
0.71
1.0
5ID-B
APS
0.71
SYNCHROTRON
APS BEAMLINE 5ID-B
1882.294
GRAMICIDIN D
4
nat
polymer
85.468
RUBIDIUM ION
14
syn
non-polymer
35.453
CHLORIDE ION
6
syn
non-polymer
46.068
ETHANOL
1
syn
non-polymer
18.015
water
31
nat
water
VAL-GRAMICIDIN A
VAL-GRAMICIDIN A
no
yes
(FVA)GA(DLE)A(DVA)V(DVA)W(DLE)W(DLE)W(DLE)W(ETA)
VGALAVVVWLWLWLWX
A,B,C,D
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
y
y
n
n
n
n
n
sample
1
16
1393
BACILLUS BREVIS
sample
1393
BACILLUS BREVIS
1
1.61
23.83
BATCH CRYSTALLIZATION WITH 30 MG/ML GRAMICIDIN AND SATURATED RBCL IN ETHANOL
pdbx_database_proc
pdbx_database_status
refine
atom_site
atom_site_anisotrop
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
pdbx_struct_conn_angle
struct_conn
struct_site
pdbx_initial_refinement_model
repository
Initial release
Atomic model
Database references
Derived calculations
Structure summary
Version format compliance
Other
Data collection
Other
Refinement description
Atomic model
Data collection
Database references
Derived calculations
Other
Refinement description
1
0
2005-09-15
1
1
2011-07-13
1
2
2012-11-30
1
3
2019-05-22
2
0
2023-11-15
2
1
2023-12-13
_pdbx_database_status.recvd_author_approval
_refine.pdbx_ls_cross_valid_method
_atom_site.auth_atom_id
_atom_site.label_atom_id
_atom_site_anisotrop.pdbx_auth_atom_id
_atom_site_anisotrop.pdbx_label_atom_id
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.status_code_sf
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.conn_type_id
_struct_conn.id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_symmetry
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
CRYSTAL STRUCTURE OF GRAMICIDIN S COMPLEXED WITH ALKALINE PROTEINASE SAVINASE
CRYSTAL STRUCTURE OF GRAMICIDIN A FROM CRYSTALS GROWN IN A LIPID CUBIC PHASE.
CRYSTAL STRUCTURE OF GRAMICIDIN A COMPLEXED WITH CESIUM CHLORIDE
CRYSTAL STRUCTURE OF GRAMICIDIN A FROM BACILLUS BREVIS
CRYSTAL STRUCTURE OF GRAMICIDIN A COMPLEXED WITH CESIUM CHLORIDE
CRYSTAL STRUCTURE OF GRAMICIDIN A COMPLRXED WITH POTASSIUM THIOCYANATE
SOLUTION STRUCTURE OF THE GRAMICIDIN A
SOLUTION STRUCTURE OF GRAMICIDIN A IN SODIUM DODECYL SULFATE MICELLES
SOLUTION STRUCTURE OF A LINKED SHORTENED GRAMICIDIN A IN BENZENE/ACETONE 10:1
SOLID STATE NMR STRUCTURE OF GRAMICIDIN A IN HYDRATED DMPC BILAYERS,
SOLUTION STRUCTURE OF GRAMICIDIN A IN METHANOL IN THE PRESENCE OF CACL
SOLUTION STRUCTURE OF GRAMICIDIN A (W15G) IN SODIUM DODECYL SULFATE MICELLES
SOLUTION STRUCTURE OF GRAMICIDIN A IN DODECYL PHOSPHOCHOLINE MICELLES
SOLUTION STRUCTURE OF GRAMICIDIN A IN DODECYL PHOSPHOCHOLINE MICELLES IN THE PRESENCE OF EXCESS NA+
SOLUTION STRUCTURE OF GRAMICIDIN A (V1F) IN SODIUM DODECYL SULFATE MICELLES
SOLUTION STRUCTURE OF GRAMICIDIN B IN SODIUM DODECYL SULFATE MICELLES
SOLUTION STRUCTURE OF GRAMICIDIN C IN SODIUM DODECYL SULFATE MICELLES
SOLUTION STRUCTURE OF F1-GRAMICIDIN C IN SODIUM DODECYL SULFATE MICELLES
SOLUTION STRUCTURE OF A LINKED UNSYMMETRIC GRAMICIDIN A IN A MEMBRANE-ISOELECTRICAL SOLVENTS MIXTURE, IN THE PRESENCE OF CSCL
CRYSTAL STRUCTURE OF GRAMICIDIN D COMPLEX WITH KI IN METHANOL
CRYSTAL STRUCTURE OF GRAMICIDIN D COMPLEX WITH NAI
CRYSTAL STRUCTURE OF GRAMICIDIN D IN N-PROPANOL
CRYSTAL STRUCTURE OF GRAMICIDIN D IN METHANOL
CRYSTAL STRUCTURE OF GRAMICIDIN D IN ETHANOL
PDBE
Y
PDBE
2004-08-10
REL
REL
RB
RUBIDIUM ION
CL
CHLORIDE ION
EOH
ETHANOL
HOH
water
GRAMICIDIN IS A HETEROGENEOUS MIXTURE OF SEVERAL COMPOUNDS
INCLUDING GRAMICIDIN A, B AND C WHICH ARE OBTAINED FROM
BACILLUS BREVIS AND COLLECTIVELY CALLED GRAMICIDIN D
HERE, GRAMICIDIN D IS REPRESENTED BY THE SEQUENCE (SEQRES)
GROUP: 1
NAME: GRAMICIDIN A
CHAIN: A, C
COMPONENT_1: PEPTIDE LIKE SEQUENCE RESIDUES 1 TO 16
DESCRIPTION: GRAMICIDIN D IS A HEXADECAMERIC HELICAL PEPTIDE
WITH ALTERNATING D,L CHARACTERISTICS.
THE N-TERM IS FORMYLATED (RESIDUE 1).
THE C-TERM IS CAPPED WITH ETHANOLAMINE (RESIDUE 16).
RESPECTIVELY.
GROUP: 2
NAME: GRAMICIDIN A
CHAIN: B, D
COMPONENT_1: PEPTIDE LIKE SEQUENCE RESIDUES 1 TO 16
DESCRIPTION: GRAMICIDIN D IS A HEXADECAMERIC HELICAL PEPTIDE
WITH ALTERNATING D,L CHARACTERISTICS.
THE N-TERM IS FORMYLATED (RESIDUE 1).
THE C-TERM IS CAPPED WITH ETHANOLAMINE (RESIDUE 16).
THE DBREF FOR EACH CHAIN IS FOR THE MAJOR
COMPONENT OF GRAMICIDIN A (TRP11), WHILE THE MINOR
COMPONENTS (PHE11) IS REPRESENTED BY SEQADV WITH
MICROHETEROGENEITY
1AV2
PDB ENTRY 1AV2
PDB
experimental model
Antibiotic
GRAMICIDIN D IS A HEXADECAMERIC HELICAL PEPTIDE
WITH ALTERNATING D,L CHARACTERISTICS.
THE N-TERM IS FORMYLATED (RESIDUE 1).
THE C-TERM IS CAPPED WITH ETHANOLAMINE (RESIDUE 16).
GRAMICIDIN D
Polypeptide
RB
1017
2
RB
RB
1017
A
RB
1018
2
RB
RB
1018
A
CL
1019
3
CL
CL
1019
A
CL
1020
3
CL
CL
1020
A
RB
1016
2
RB
RB
1016
B
RB
1017
2
RB
RB
1017
B
RB
1018
2
RB
RB
1018
B
CL
1019
3
CL
CL
1019
B
CL
1020
3
CL
CL
1020
B
CL
1021
3
CL
CL
1021
B
RB
1016
2
RB
RB
1016
C
EOH
1017
4
EOH
EOH
1017
C
RB
1018
2
RB
RB
1018
C
RB
1019
2
RB
RB
1019
C
RB
1020
2
RB
RB
1020
C
RB
1021
2
RB
RB
1021
C
RB
1022
2
RB
RB
1022
C
RB
1016
2
RB
RB
1016
D
RB
1017
2
RB
RB
1017
D
RB
1018
2
RB
RB
1018
D
CL
1019
3
CL
CL
1019
D
HOH
2001
5
HOH
HOH
2001
A
HOH
2002
5
HOH
HOH
2002
A
HOH
2003
5
HOH
HOH
2003
A
HOH
2004
5
HOH
HOH
2004
A
HOH
2005
5
HOH
HOH
2005
A
HOH
2006
5
HOH
HOH
2006
A
HOH
2007
5
HOH
HOH
2007
A
HOH
2008
5
HOH
HOH
2008
A
HOH
2001
5
HOH
HOH
2001
B
HOH
2002
5
HOH
HOH
2002
B
HOH
2003
5
HOH
HOH
2003
B
HOH
2004
5
HOH
HOH
2004
B
HOH
2005
5
HOH
HOH
2005
B
HOH
2006
5
HOH
HOH
2006
B
HOH
2007
5
HOH
HOH
2007
B
HOH
2008
5
HOH
HOH
2008
B
HOH
2001
5
HOH
HOH
2001
C
HOH
2002
5
HOH
HOH
2002
C
HOH
2003
5
HOH
HOH
2003
C
HOH
2001
5
HOH
HOH
2001
D
HOH
2002
5
HOH
HOH
2002
D
HOH
2003
5
HOH
HOH
2003
D
HOH
2004
5
HOH
HOH
2004
D
HOH
2005
5
HOH
HOH
2005
D
HOH
2006
5
HOH
HOH
2006
D
HOH
2007
5
HOH
HOH
2007
D
HOH
2008
5
HOH
HOH
2008
D
HOH
2009
5
HOH
HOH
2009
D
HOH
2010
5
HOH
HOH
2010
D
HOH
2011
5
HOH
HOH
2011
D
HOH
2012
5
HOH
HOH
2012
D
FVA
1
n
1
FVA
1
A
GLY
2
n
2
GLY
2
A
ALA
3
n
3
ALA
3
A
DLE
4
n
4
DLE
4
A
ALA
5
n
5
ALA
5
A
DVA
6
n
6
DVA
6
A
VAL
7
n
7
VAL
7
A
DVA
8
n
8
DVA
8
A
TRP
9
n
9
TRP
9
A
DLE
10
n
10
DLE
10
A
TRP
11
y
11
TRP
11
A
DLE
12
n
12
DLE
12
A
TRP
13
n
13
TRP
13
A
DLE
14
n
14
DLE
14
A
TRP
15
n
15
TRP
15
A
ETA
16
n
16
ETA
16
A
FVA
1
n
1
FVA
1
B
GLY
2
n
2
GLY
2
B
ALA
3
n
3
ALA
3
B
DLE
4
n
4
DLE
4
B
ALA
5
n
5
ALA
5
B
DVA
6
n
6
DVA
6
B
VAL
7
n
7
VAL
7
B
DVA
8
n
8
DVA
8
B
TRP
9
n
9
TRP
9
B
DLE
10
n
10
DLE
10
B
TRP
11
y
11
TRP
11
B
TYR
11
y
11
TYR
11
B
DLE
12
n
12
DLE
12
B
TRP
13
n
13
TRP
13
B
DLE
14
n
14
DLE
14
B
TRP
15
n
15
TRP
15
B
ETA
16
n
16
ETA
16
B
FVA
1
n
1
FVA
1
C
GLY
2
n
2
GLY
2
C
ALA
3
n
3
ALA
3
C
DLE
4
n
4
DLE
4
C
ALA
5
n
5
ALA
5
C
DVA
6
n
6
DVA
6
C
VAL
7
n
7
VAL
7
C
DVA
8
n
8
DVA
8
C
TRP
9
n
9
TRP
9
C
DLE
10
n
10
DLE
10
C
TRP
11
y
11
TRP
11
C
DLE
12
n
12
DLE
12
C
TRP
13
n
13
TRP
13
C
DLE
14
n
14
DLE
14
C
TRP
15
n
15
TRP
15
C
ETA
16
n
16
ETA
16
C
FVA
1
n
1
FVA
1
D
GLY
2
n
2
GLY
2
D
ALA
3
n
3
ALA
3
D
DLE
4
n
4
DLE
4
D
ALA
5
n
5
ALA
5
D
DVA
6
n
6
DVA
6
D
VAL
7
n
7
VAL
7
D
DVA
8
n
8
DVA
8
D
TRP
9
n
9
TRP
9
D
DLE
10
n
10
DLE
10
D
TRP
11
y
11
TRP
11
D
TYR
11
y
11
TYR
11
D
DLE
12
n
12
DLE
12
D
TRP
13
n
13
TRP
13
D
DLE
14
n
14
DLE
14
D
TRP
15
n
15
TRP
15
D
ETA
16
n
16
ETA
16
D
0.1624
0.1731
0.1618
0.1714
0.2018
0.2147
1470
1628
5.
5.
28271
software_defined_assembly
PQS
2
dimeric
software_defined_assembly
PQS
2
dimeric
2980
-34.7
3360
3450
-30.8
3580
A
HOH
2004
Z
O
HOH
1_555
A
RB
1017
E
RB
RB
1_555
B
DLE
12
B
O
DLE
12
1_555
116.1
B
TRP
15
B
O
TRP
15
1_555
C
RB
1021
T
RB
RB
1_555
B
HOH
2007
AA
O
HOH
1_555
110.3
B
HOH
2002
AA
O
HOH
1_555
B
RB
1017
J
RB
RB
1_555
B
HOH
2004
AA
O
HOH
1_555
162.5
C
GLY
2
C
O
GLY
2
1_555
C
RB
1020
S
RB
RB
1_555
D
HOH
2011
CA
O
HOH
1_555
105.0
C
ETA
16
C
N
ETA
16
1_555
C
RB
1018
Q
RB
RB
1_555
C
HOH
2003
BA
O
HOH
1_555
100.1
C
HOH
2001
BA
O
HOH
1_555
D
RB
1016
V
RB
RB
1_555
D
GLY
2
D
O
GLY
2
1_555
134.9
C
HOH
2001
BA
O
HOH
1_555
D
RB
1016
V
RB
RB
1_555
D
HOH
2006
CA
O
HOH
1_555
131.4
D
GLY
2
D
O
GLY
2
1_555
D
RB
1016
V
RB
RB
1_555
D
HOH
2006
CA
O
HOH
1_555
89.7
D
DVA
8
D
N
DVA
8
1_555
D
RB
1017
W
RB
RB
1_555
D
HOH
2002
CA
O
HOH
1_555
97.1
A
FVA
1
N-FORMYL-L-VALINE
A
FVA
1
VAL
B
FVA
1
N-FORMYL-L-VALINE
B
FVA
1
VAL
C
FVA
1
N-FORMYL-L-VALINE
C
FVA
1
VAL
D
FVA
1
N-FORMYL-L-VALINE
D
FVA
1
VAL
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
DLE
14
A
N
DLE
14
B
O
GLY
2
B
O
GLY
2
C
N
DLE
14
C
N
DLE
14
D
O
GLY
2
D
O
GLY
2
1
B
O
ETA
16
B
O
ETA
16
1
Y
1
D
D
O
N
TYR
DLE
11
12
1.64
B
1
B
B
C
N
TYR
DLE
11
12
1.07
B
1
D
D
C
N
TYR
DLE
11
12
0.96
B
1
23.85
2.30
115.30
139.15
A
A
A
CA
CB
CG
DLE
DLE
DLE
10
10
10
A
N
1
14.94
2.30
115.30
130.24
A
A
A
CA
CB
CG
DLE
DLE
DLE
10
10
10
B
N
1
-6.49
1.00
117.40
110.91
A
A
A
CH2
CZ2
CE2
TRP
TRP
TRP
15
15
15
N
1
-11.12
1.60
122.70
111.58
B
B
B
O
C
N
TYR
TYR
DLE
11
11
12
B
B
Y
1
15.70
2.30
115.30
131.00
B
B
B
CA
CB
CG
DLE
DLE
DLE
14
14
14
A
A
N
1
14.39
2.20
117.20
131.59
D
D
D
CA
C
N
DLE
DLE
TYR
10
10
11
B
Y
1
-17.12
1.60
122.70
105.58
D
D
D
O
C
N
DLE
DLE
TYR
10
10
11
B
Y
1
31.15
2.50
121.70
152.85
D
D
D
C
N
CA
DLE
TYR
TYR
10
11
11
B
B
Y
1
-7.14
0.90
133.90
126.76
D
D
D
CG
CD2
CE3
TRP
TRP
TRP
11
11
11
A
A
A
N
1
20.14
2.20
117.20
137.34
D
D
D
CA
C
N
TYR
TYR
DLE
11
11
12
B
B
Y
1
-26.19
1.60
122.70
96.51
D
D
D
O
C
N
TYR
TYR
DLE
11
11
12
B
B
Y
1
B
B
C
N
TYR
DLE
11
12
-0.270
0.023
1.336
1.066
B
Y
1
D
D
C
N
TYR
DLE
11
12
-0.372
0.023
1.336
0.964
B
Y
0.2147
0.1731
0.1714
1.14
20
6591
1628
33140
9395
5.
98.7
RANDOM
1
FREE R-VALUE
0.0
MOLECULAR REPLACEMENT
PDB ENTRY 1AV2
ENGH AND HUBER
24
557.77
570.12
1.14
20
31
621
23
0
567
0.015
0.036
0.000
0.028
0.098
0.138
0.000
0.006
0.038
0.000
1.140
20.000
1W5U
33140
0.07000
1
20.5000
8.250
98.7
0.34000
1.14
20.00
6.400
1
4.44
97.2
refinement
SHELXL-97
data reduction
DENZO
data scaling
SCALEPACK
GRAMICIDIN D FROM BACILLUS BREVIS (ETHANOL SOLVATE)
1
N
N
1
N
N
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
2
N
N
2
N
N
2
N
N
3
N
N
3
N
N
3
N
N
2
N
N
4
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
3
N
N
5
N
N
5
N
N
5
N
N
5
N
N
covale
1.351
both
A
FVA
1
A
C
FVA
1
1_555
A
GLY
2
A
N
GLY
2
1_555
covale
1.279
both
A
ALA
3
A
C
ALA
3
1_555
A
DLE
4
A
N
DLE
4
1_555
covale
1.316
both
A
DLE
4
A
C
DLE
4
1_555
A
ALA
5
A
N
ALA
5
1_555
covale
1.340
both
A
ALA
5
A
C
ALA
5
1_555
A
DVA
6
A
N
DVA
6
1_555
covale
1.315
both
A
DVA
6
A
C
DVA
6
1_555
A
VAL
7
A
N
VAL
7
1_555
covale
1.334
both
A
VAL
7
A
C
VAL
7
1_555
A
DVA
8
A
N
DVA
8
1_555
covale
1.330
both
A
DVA
8
A
C
DVA
8
1_555
A
TRP
9
A
N
TRP
9
1_555
covale
1.336
both
A
TRP
9
A
C
TRP
9
1_555
A
DLE
10
A
N
DLE
10
1_555
covale
1.322
both
A
DLE
10
A
C
DLE
10
1_555
A
TRP
11
A
N
TRP
11
1_555
covale
1.352
both
A
TRP
11
A
C
TRP
11
1_555
A
DLE
12
A
N
DLE
12
1_555
covale
1.306
both
A
DLE
12
A
C
DLE
12
1_555
A
TRP
13
A
N
TRP
13
1_555
covale
1.323
both
A
TRP
13
A
C
TRP
13
1_555
A
DLE
14
A
N
DLE
14
1_555
covale
1.302
both
A
DLE
14
A
C
DLE
14
1_555
A
TRP
15
A
N
TRP
15
1_555
covale
1.350
both
A
TRP
15
A
C
TRP
15
1_555
A
ETA
16
A
N
ETA
16
1_555
covale
1.331
both
B
FVA
1
B
C
FVA
1
1_555
B
GLY
2
B
N
GLY
2
1_555
covale
1.313
both
B
ALA
3
B
C
ALA
3
1_555
B
DLE
4
B
N
DLE
4
1_555
covale
1.330
both
B
DLE
4
B
C
DLE
4
1_555
B
ALA
5
B
N
ALA
5
1_555
covale
1.319
both
B
ALA
5
B
C
ALA
5
1_555
B
DVA
6
B
N
DVA
6
1_555
covale
1.322
both
B
DVA
6
B
C
DVA
6
1_555
B
VAL
7
B
N
VAL
7
1_555
covale
1.319
both
B
VAL
7
B
C
VAL
7
1_555
B
DVA
8
B
N
DVA
8
1_555
covale
1.334
both
B
DVA
8
B
C
DVA
8
1_555
B
TRP
9
B
N
TRP
9
1_555
covale
1.309
both
B
TRP
9
B
C
TRP
9
1_555
B
DLE
10
B
N
DLE
10
1_555
covale
1.321
both
A
B
DLE
10
B
C
DLE
10
1_555
B
TRP
11
B
N
TRP
11
1_555
covale
1.286
both
B
B
DLE
10
B
C
DLE
10
1_555
B
TYR
11
B
N
TYR
11
1_555
covale
1.342
both
A
B
TRP
11
B
C
TRP
11
1_555
B
DLE
12
B
N
DLE
12
1_555
covale
1.316
both
B
DLE
12
B
C
DLE
12
1_555
B
TRP
13
B
N
TRP
13
1_555
covale
1.346
both
B
TRP
13
B
C
TRP
13
1_555
B
DLE
14
B
N
DLE
14
1_555
covale
1.283
both
B
DLE
14
B
C
DLE
14
1_555
B
TRP
15
B
N
TRP
15
1_555
covale
1.323
both
B
TRP
15
B
C
TRP
15
1_555
B
ETA
16
B
N
ETA
16
1_555
covale
1.309
both
C
FVA
1
C
C
FVA
1
1_555
C
GLY
2
C
N
GLY
2
1_555
covale
1.316
both
C
ALA
3
C
C
ALA
3
1_555
C
DLE
4
C
N
DLE
4
1_555
covale
1.285
both
C
DLE
4
C
C
DLE
4
1_555
C
ALA
5
C
N
ALA
5
1_555
covale
1.331
both
C
ALA
5
C
C
ALA
5
1_555
C
DVA
6
C
N
DVA
6
1_555
covale
1.323
both
C
DVA
6
C
C
DVA
6
1_555
C
VAL
7
C
N
VAL
7
1_555
covale
1.329
both
C
VAL
7
C
C
VAL
7
1_555
C
DVA
8
C
N
DVA
8
1_555
covale
1.314
both
C
DVA
8
C
C
DVA
8
1_555
C
TRP
9
C
N
TRP
9
1_555
covale
1.301
both
C
TRP
9
C
C
TRP
9
1_555
C
DLE
10
C
N
DLE
10
1_555
covale
1.304
both
C
DLE
10
C
C
DLE
10
1_555
C
TRP
11
C
N
TRP
11
1_555
covale
1.328
both
C
TRP
11
C
C
TRP
11
1_555
C
DLE
12
C
N
DLE
12
1_555
covale
1.317
both
C
DLE
12
C
C
DLE
12
1_555
C
TRP
13
C
N
TRP
13
1_555
covale
1.326
both
C
TRP
13
C
C
TRP
13
1_555
C
DLE
14
C
N
DLE
14
1_555
covale
1.318
both
C
DLE
14
C
C
DLE
14
1_555
C
TRP
15
C
N
TRP
15
1_555
covale
1.311
both
C
TRP
15
C
C
TRP
15
1_555
C
ETA
16
C
N
ETA
16
1_555
covale
1.319
both
D
FVA
1
D
C
FVA
1
1_555
D
GLY
2
D
N
GLY
2
1_555
covale
1.320
both
D
ALA
3
D
C
ALA
3
1_555
D
DLE
4
D
N
DLE
4
1_555
covale
1.306
both
D
DLE
4
D
C
DLE
4
1_555
D
ALA
5
D
N
ALA
5
1_555
covale
1.333
both
D
ALA
5
D
C
ALA
5
1_555
D
DVA
6
D
N
DVA
6
1_555
covale
1.343
both
D
DVA
6
D
C
DVA
6
1_555
D
VAL
7
D
N
VAL
7
1_555
covale
1.329
both
D
VAL
7
D
C
VAL
7
1_555
D
DVA
8
D
N
DVA
8
1_555
covale
1.316
both
D
DVA
8
D
C
DVA
8
1_555
D
TRP
9
D
N
TRP
9
1_555
covale
1.323
both
D
TRP
9
D
C
TRP
9
1_555
D
DLE
10
D
N
DLE
10
1_555
covale
1.340
both
A
D
DLE
10
D
C
DLE
10
1_555
D
TRP
11
D
N
TRP
11
1_555
covale
1.283
both
B
D
DLE
10
D
C
DLE
10
1_555
D
TYR
11
D
N
TYR
11
1_555
covale
1.318
both
A
D
TRP
11
D
C
TRP
11
1_555
D
DLE
12
D
N
DLE
12
1_555
covale
1.323
both
D
DLE
12
D
C
DLE
12
1_555
D
TRP
13
D
N
TRP
13
1_555
covale
1.309
both
D
TRP
13
D
C
TRP
13
1_555
D
DLE
14
D
N
DLE
14
1_555
covale
1.336
both
D
DLE
14
D
C
DLE
14
1_555
D
TRP
15
D
N
TRP
15
1_555
covale
1.357
both
D
TRP
15
D
C
TRP
15
1_555
D
ETA
16
D
N
ETA
16
1_555
metalc
2.594
A
RB
1017
E
RB
RB
1_555
A
HOH
2004
Z
O
HOH
1_555
metalc
3.053
A
RB
1017
E
RB
RB
1_555
B
DLE
12
B
O
DLE
12
1_555
metalc
3.147
A
HOH
2001
Z
O
HOH
2_664
B
RB
1016
I
RB
RB
1_555
metalc
3.129
B
GLY
2
B
O
GLY
2
1_555
C
RB
1016
O
RB
RB
1_555
metalc
3.167
B
TRP
15
B
O
TRP
15
1_555
C
RB
1021
T
RB
RB
1_555
metalc
2.747
B
RB
1017
J
RB
RB
1_555
B
HOH
2002
AA
O
HOH
1_555
metalc
3.132
B
RB
1017
J
RB
RB
1_555
B
HOH
2004
AA
O
HOH
1_555
metalc
2.757
B
RB
1018
K
RB
RB
1_555
B
HOH
2008
AA
O
HOH
1_555
metalc
2.741
B
HOH
2007
AA
O
HOH
1_555
C
RB
1021
T
RB
RB
1_555
metalc
3.164
C
GLY
2
C
O
GLY
2
1_555
C
RB
1020
S
RB
RB
1_555
metalc
3.151
C
ETA
16
C
N
ETA
16
1_555
C
RB
1018
Q
RB
RB
1_555
metalc
3.113
C
RB
1018
Q
RB
RB
1_555
C
HOH
2003
BA
O
HOH
1_555
metalc
2.864
C
RB
1019
R
RB
RB
1_555
D
HOH
2004
CA
O
HOH
1_555
metalc
2.611
C
RB
1020
S
RB
RB
1_555
D
HOH
2011
CA
O
HOH
1_555
metalc
3.155
C
HOH
2001
BA
O
HOH
1_555
D
RB
1016
V
RB
RB
1_555
metalc
3.135
D
GLY
2
D
O
GLY
2
1_555
D
RB
1016
V
RB
RB
1_555
metalc
3.150
D
DVA
8
D
N
DVA
8
1_555
D
RB
1017
W
RB
RB
1_555
metalc
3.105
D
RB
1016
V
RB
RB
1_555
D
HOH
2006
CA
O
HOH
1_555
metalc
2.938
D
RB
1017
W
RB
RB
1_555
D
HOH
2002
CA
O
HOH
1_555
metalc
2.935
D
RB
1018
X
RB
RB
1_555
D
HOH
2004
CA
O
HOH
1_555
ANTIBIOTIC
ANTIBIOTIC, GRAMICIDIN, ANTIFUNGAL, ANTIBACTERIAL, MEMBRANE ION CHANNEL, LINEAR GRAMICIDIN
1W5U
PDB
1
1
1W5U
1
16
1W5U
1
16
1W5U
A
1
1
16
1
16
1W5U
1
16
1W5U
B
1
1
16
1
16
1W5U
1
16
1W5U
C
1
1
16
1
16
1W5U
1
16
1W5U
D
1
1
16
2
2
anti-parallel
anti-parallel
A
GLY
2
A
GLY
2
A
TRP
15
A
TRP
15
B
GLY
2
B
GLY
2
B
TRP
15
B
TRP
15
C
GLY
2
C
GLY
2
C
TRP
15
C
TRP
15
D
GLY
2
D
GLY
2
D
TRP
15
D
TRP
15
BINDING SITE FOR RESIDUE RB A 1017
A
RB
1017
Software
9
BINDING SITE FOR RESIDUE RB A 1018
A
RB
1018
Software
8
BINDING SITE FOR RESIDUE CL A 1019
A
CL
1019
Software
8
BINDING SITE FOR RESIDUE CL A 1020
A
CL
1020
Software
3
BINDING SITE FOR RESIDUE RB B 1016
B
RB
1016
Software
4
BINDING SITE FOR RESIDUE RB B 1017
B
RB
1017
Software
10
BINDING SITE FOR RESIDUE RB B 1018
B
RB
1018
Software
8
BINDING SITE FOR RESIDUE CL B 1019
B
CL
1019
Software
8
BINDING SITE FOR RESIDUE CL B 1020
B
CL
1020
Software
4
BINDING SITE FOR RESIDUE CL B 1021
B
CL
1021
Software
1
BINDING SITE FOR RESIDUE RB C 1016
C
RB
1016
Software
7
BINDING SITE FOR RESIDUE EOH C 1017
C
EOH
1017
Software
5
BINDING SITE FOR RESIDUE RB C 1018
C
RB
1018
Software
7
BINDING SITE FOR RESIDUE RB C 1019
C
RB
1019
Software
11
BINDING SITE FOR RESIDUE RB C 1020
C
RB
1020
Software
8
BINDING SITE FOR RESIDUE RB C 1021
C
RB
1021
Software
10
BINDING SITE FOR RESIDUE RB C 1022
C
RB
1022
Software
9
BINDING SITE FOR RESIDUE RB D 1016
D
RB
1016
Software
7
BINDING SITE FOR RESIDUE RB D 1017
D
RB
1017
Software
9
BINDING SITE FOR RESIDUE RB D 1018
D
RB
1018
Software
7
BINDING SITE FOR RESIDUE CL D 1019
D
CL
1019
Software
7
BINDING SITE FOR CHAIN A OF GRAMICIDIN D
Software
52
BINDING SITE FOR CHAIN B OF GRAMICIDIN D
Software
52
BINDING SITE FOR CHAIN C OF GRAMICIDIN D
Software
51
BINDING SITE FOR CHAIN D OF GRAMICIDIN D
Software
48
A
GLY
2
A
GLY
2
9
1_555
A
DLE
4
A
DLE
4
9
1_555
A
ALA
5
A
ALA
5
9
1_555
A
RB
1018
F
RB
9
1_555
A
HOH
2002
Z
HOH
9
1_555
A
HOH
2004
Z
HOH
9
1_555
B
DLE
12
B
DLE
12
9
1_555
B
TRP
15
B
TRP
15
9
1_555
C
RB
1021
T
RB
9
1_555
A
GLY
2
A
GLY
2
8
1_555
A
ALA
5
A
ALA
5
8
1_555
A
RB
1017
E
RB
8
1_555
A
HOH
2004
Z
HOH
8
1_555
B
DLE
14
B
DLE
14
8
1_555
B
TRP
15
B
TRP
15
8
1_555
B
ETA
16
B
ETA
16
8
1_555
C
RB
1021
T
RB
8
1_555
A
TRP
13
A
TRP
13
8
1_555
A
TRP
15
A
TRP
15
8
4_466
A
HOH
2007
Z
HOH
8
4_466
B
VAL
7
B
VAL
7
8
4_466
B
TRP
9
B
TRP
9
8
1_555
C
TRP
13
C
TRP
13
8
4_456
C
TRP
15
C
TRP
15
8
1_565
D
TRP
9
D
TRP
9
8
4_456
A
TRP
15
A
TRP
15
3
1_555
A
ETA
16
A
ETA
16
3
1_555
C
TRP
9
C
TRP
9
3
4_556
A
DLE
14
A
DLE
14
4
1_555
A
ETA
16
A
ETA
16
4
1_555
B
GLY
2
B
GLY
2
4
1_555
C
RB
1016
O
RB
4
1_555
A
DVA
8
A
DVA
8
10
1_555
A
DLE
10
A
DLE
10
10
1_555
A
HOH
2005
Z
HOH
10
1_555
B
DVA
6
B
DVA
6
10
1_555
B
VAL
7
B
VAL
7
10
1_555
B
DVA
8
B
DVA
8
10
1_555
B
RB
1018
K
RB
10
1_555
B
HOH
2002
AA
HOH
10
1_555
B
HOH
2003
AA
HOH
10
1_555
B
HOH
2005
AA
HOH
10
1_555
A
DVA
8
A
DVA
8
8
1_555
A
DLE
10
A
DLE
10
8
1_555
B
DVA
8
B
DVA
8
8
1_555
B
TRP
11
B
TRP
11
8
1_555
B
RB
1017
J
RB
8
1_555
B
HOH
2004
AA
HOH
8
1_555
B
HOH
2005
AA
HOH
8
1_555
B
HOH
2008
AA
HOH
8
1_555
A
DLE
4
A
DLE
4
8
1_555
B
TRP
11
B
TRP
11
8
1_555
B
CL
1020
M
CL
8
3_646
B
HOH
2006
AA
HOH
8
3_646
C
TRP
9
C
TRP
9
8
3_656
D
TRP
13
D
TRP
13
8
1_555
D
DLE
14
D
DLE
14
8
3_656
D
TRP
15
D
TRP
15
8
3_656
B
TRP
9
B
TRP
9
4
1_555
B
CL
1019
L
CL
4
3_656
B
HOH
2006
AA
HOH
4
1_555
D
TRP
15
D
TRP
15
4
1_565
B
TRP
13
B
TRP
13
1
1_555
A
DLE
12
A
DLE
12
7
1_555
A
DLE
14
A
DLE
14
7
1_555
A
HOH
2006
Z
HOH
7
1_555
B
GLY
2
B
GLY
2
7
1_555
B
DLE
4
B
DLE
4
7
1_555
B
RB
1016
I
RB
7
1_555
B
HOH
2002
AA
HOH
7
1_555
A
TRP
9
A
TRP
9
5
3_746
C
DLE
4
C
DLE
4
5
1_555
C
ALA
5
C
ALA
5
5
1_555
C
RB
1022
U
RB
5
1_555
D
ETA
16
D
ETA
16
5
1_555
C
DLE
14
C
DLE
14
7
1_555
C
TRP
15
C
TRP
15
7
1_555
C
ETA
16
C
ETA
16
7
1_555
D
GLY
2
D
GLY
2
7
1_555
D
ALA
5
D
ALA
5
7
1_555
D
RB
1016
V
RB
7
1_555
D
HOH
2006
CA
HOH
7
1_555
C
DVA
6
C
DVA
6
11
1_555
C
VAL
7
C
VAL
7
11
1_555
C
RB
1020
S
RB
11
1_555
C
RB
1022
U
RB
11
1_555
D
TRP
13
D
TRP
13
11
1_555
D
DLE
14
D
DLE
14
11
1_555
D
TRP
15
D
TRP
15
11
1_555
D
HOH
2004
CA
HOH
11
1_555
D
HOH
2009
CA
HOH
11
1_555
D
HOH
2010
CA
HOH
11
1_555
D
HOH
2011
CA
HOH
11
1_555
C
GLY
2
C
GLY
2
8
1_555
C
DLE
4
C
DLE
4
8
1_555
C
ALA
5
C
ALA
5
8
1_555
C
RB
1019
R
RB
8
1_555
C
RB
1022
U
RB
8
1_555
D
DLE
14
D
DLE
14
8
1_555
D
HOH
2010
CA
HOH
8
1_555
D
HOH
2011
CA
HOH
8
1_555
A
DLE
4
A
DLE
4
10
1_555
A
ALA
5
A
ALA
5
10
1_555
A
VAL
7
A
VAL
7
10
1_555
A
RB
1017
E
RB
10
1_555
A
RB
1018
F
RB
10
1_555
A
HOH
2002
Z
HOH
10
1_555
B
DLE
12
B
DLE
12
10
1_555
B
DLE
14
B
DLE
14
10
1_555
B
TRP
15
B
TRP
15
10
1_555
B
HOH
2007
AA
HOH
10
1_555
C
GLY
2
C
GLY
2
9
1_555
C
ALA
5
C
ALA
5
9
1_555
C
EOH
1017
P
EOH
9
1_555
C
RB
1019
R
RB
9
1_555
C
RB
1020
S
RB
9
1_555
D
DLE
14
D
DLE
14
9
1_555
D
TRP
15
D
TRP
15
9
1_555
D
ETA
16
D
ETA
16
9
1_555
D
HOH
2010
CA
HOH
9
1_555
C
DLE
12
C
DLE
12
7
1_555
C
DLE
14
C
DLE
14
7
1_555
C
RB
1018
Q
RB
7
1_555
C
HOH
2003
BA
HOH
7
1_555
D
GLY
2
D
GLY
2
7
1_555
D
DLE
4
D
DLE
4
7
1_555
D
HOH
2002
CA
HOH
7
1_555
C
DVA
8
C
DVA
8
9
1_555
C
DLE
10
C
DLE
10
9
1_555
C
HOH
2001
BA
HOH
9
1_555
D
DVA
6
D
DVA
6
9
1_555
D
VAL
7
D
VAL
7
9
1_555
D
DVA
8
D
DVA
8
9
1_555
D
RB
1018
X
RB
9
1_555
D
HOH
2002
CA
HOH
9
1_555
D
HOH
2008
CA
HOH
9
1_555
C
DVA
8
C
DVA
8
7
1_555
C
DLE
10
C
DLE
10
7
1_555
D
DVA
8
D
DVA
8
7
1_555
D
DLE
10
D
DLE
10
7
1_555
D
RB
1017
W
RB
7
1_555
D
HOH
2004
CA
HOH
7
1_555
D
HOH
2007
CA
HOH
7
1_555
A
DLE
10
A
DLE
10
7
1_555
B
DLE
12
B
DLE
12
7
1_555
B
TRP
13
B
TRP
13
7
1_555
B
DLE
14
B
DLE
14
7
3_746
B
TRP
15
B
TRP
15
7
3_746
C
DLE
4
C
DLE
4
7
1_555
D
TRP
11
D
TRP
11
7
1_555
A
RB
1017
E
RB
52
1_555
A
RB
1018
F
RB
52
1_555
A
CL
1019
G
CL
52
1_555
A
CL
1019
G
CL
52
4_566
A
CL
1020
H
CL
52
1_555
A
HOH
2003
Z
HOH
52
1_555
A
HOH
2004
Z
HOH
52
1_555
A
HOH
2005
Z
HOH
52
1_555
A
HOH
2007
Z
HOH
52
1_555
B
GLY
2
B
GLY
2
52
1_555
B
GLY
2
B
GLY
2
52
2_665
B
ALA
3
B
ALA
3
52
2_665
B
ALA
3
B
ALA
3
52
1_555
B
DLE
4
B
DLE
4
52
1_555
B
ALA
5
B
ALA
5
52
1_555
B
DVA
6
B
DVA
6
52
1_555
B
VAL
7
B
VAL
7
52
1_555
B
DVA
8
B
DVA
8
52
1_555
B
TRP
9
B
TRP
9
52
4_566
B
TRP
9
B
TRP
9
52
1_555
B
DLE
10
B
DLE
10
52
1_555
B
TRP
11
B
TRP
11
52
1_555
B
DLE
12
B
DLE
12
52
1_555
B
TRP
13
B
TRP
13
52
1_555
B
DLE
14
B
DLE
14
52
1_555
B
TRP
15
B
TRP
15
52
1_555
B
ETA
16
B
ETA
16
52
1_555
B
RB
1016
I
RB
52
1_555
B
RB
1017
J
RB
52
1_555
B
RB
1018
K
RB
52
1_555
B
CL
1019
L
CL
52
1_555
C
DLE
4
C
DLE
4
52
3_756
C
TRP
9
C
TRP
9
52
4_556
C
TRP
11
C
TRP
11
52
1_555
C
DLE
12
C
DLE
12
52
4_456
C
TRP
13
C
TRP
13
52
4_456
C
DLE
14
C
DLE
14
52
1_565
C
TRP
15
C
TRP
15
52
4_556
C
TRP
15
C
TRP
15
52
1_565
C
ETA
16
C
ETA
16
52
4_556
C
RB
1016
O
RB
52
1_555
C
EOH
1017
P
EOH
52
3_756
C
RB
1021
T
RB
52
1_555
D
DVA
6
D
DVA
6
52
4_556
D
DVA
8
D
DVA
8
52
1_565
D
TRP
9
D
TRP
9
52
4_456
D
DLE
10
D
DLE
10
52
3_756
D
TRP
11
D
TRP
11
52
1_555
D
TRP
11
D
TRP
11
52
3_756
D
TRP
13
D
TRP
13
52
3_656
D
TRP
15
D
TRP
15
52
1_565
D
CL
1019
Y
CL
52
1_555
A
GLY
2
A
GLY
2
52
2_664
A
GLY
2
A
GLY
2
52
1_555
A
ALA
3
A
ALA
3
52
2_664
A
ALA
3
A
ALA
3
52
1_555
A
DLE
4
A
DLE
4
52
1_555
A
ALA
5
A
ALA
5
52
1_555
A
DVA
6
A
DVA
6
52
1_555
A
VAL
7
A
VAL
7
52
1_555
A
DVA
8
A
DVA
8
52
1_555
A
TRP
9
A
TRP
9
52
1_555
A
DLE
10
A
DLE
10
52
1_555
A
TRP
11
A
TRP
11
52
1_555
A
DLE
12
A
DLE
12
52
1_555
A
TRP
13
A
TRP
13
52
1_555
A
DLE
14
A
DLE
14
52
1_555
A
TRP
15
A
TRP
15
52
1_555
A
TRP
15
A
TRP
15
52
4_466
A
ETA
16
A
ETA
16
52
1_555
A
RB
1017
E
RB
52
1_555
A
RB
1018
F
RB
52
1_555
A
CL
1019
G
CL
52
1_555
A
CL
1019
G
CL
52
4_566
B
RB
1016
I
RB
52
1_555
B
RB
1017
J
RB
52
1_555
B
RB
1018
K
RB
52
1_555
B
CL
1019
L
CL
52
1_555
B
CL
1020
M
CL
52
1_555
B
CL
1021
N
CL
52
2_664
B
CL
1021
N
CL
52
1_555
B
HOH
2001
AA
HOH
52
1_555
B
HOH
2004
AA
HOH
52
1_555
B
HOH
2007
AA
HOH
52
1_555
C
DVA
6
C
DVA
6
52
3_756
C
VAL
7
C
VAL
7
52
1_565
C
TRP
9
C
TRP
9
52
3_656
C
TRP
11
C
TRP
11
52
1_555
C
TRP
15
C
TRP
15
52
4_556
C
ETA
16
C
ETA
16
52
4_556
C
RB
1016
O
RB
52
1_555
C
RB
1021
T
RB
52
1_555
D
DVA
6
D
DVA
6
52
4_556
D
TRP
9
D
TRP
9
52
3_756
D
TRP
11
D
TRP
11
52
1_555
D
TRP
11
D
TRP
11
52
3_756
D
DLE
12
D
DLE
12
52
1_555
D
TRP
13
D
TRP
13
52
1_555
D
TRP
13
D
TRP
13
52
3_656
D
DLE
14
D
DLE
14
52
3_656
D
TRP
15
D
TRP
15
52
1_565
D
TRP
15
D
TRP
15
52
3_656
D
CL
1019
Y
CL
52
3_756
D
CL
1019
Y
CL
52
1_555
A
TRP
9
A
TRP
9
51
3_746
A
TRP
9
A
TRP
9
51
4_456
A
TRP
11
A
TRP
11
51
1_555
A
TRP
13
A
TRP
13
51
4_556
A
DLE
14
A
DLE
14
51
1_545
A
TRP
15
A
TRP
15
51
4_456
A
TRP
15
A
TRP
15
51
1_545
A
ETA
16
A
ETA
16
51
4_456
A
CL
1019
G
CL
51
1_545
A
CL
1019
G
CL
51
4_556
A
CL
1020
H
CL
51
4_456
A
HOH
2008
Z
HOH
51
1_545
B
DLE
4
B
DLE
4
51
1_555
B
DVA
6
B
DVA
6
51
4_456
B
VAL
7
B
VAL
7
51
4_456
B
TRP
11
B
TRP
11
51
3_646
B
TRP
11
B
TRP
11
51
1_555
B
TRP
13
B
TRP
13
51
3_746
B
TRP
15
B
TRP
15
51
1_545
B
ETA
16
B
ETA
16
51
3_646
B
CL
1019
L
CL
51
3_646
B
HOH
2006
AA
HOH
51
1_545
C
EOH
1017
P
EOH
51
1_555
C
RB
1018
Q
RB
51
1_555
C
RB
1019
R
RB
51
1_555
C
RB
1020
S
RB
51
1_555
C
RB
1022
U
RB
51
1_555
C
HOH
2001
BA
HOH
51
1_555
C
HOH
2002
BA
HOH
51
1_555
D
GLY
2
D
GLY
2
51
1_555
D
GLY
2
D
GLY
2
51
2_655
D
ALA
3
D
ALA
3
51
2_655
D
ALA
3
D
ALA
3
51
1_555
D
DLE
4
D
DLE
4
51
1_555
D
ALA
5
D
ALA
5
51
1_555
D
DVA
6
D
DVA
6
51
1_555
D
VAL
7
D
VAL
7
51
1_555
D
DVA
8
D
DVA
8
51
1_555
D
TRP
9
D
TRP
9
51
1_555
D
DLE
10
D
DLE
10
51
1_555
D
TRP
11
D
TRP
11
51
1_555
D
DLE
12
D
DLE
12
51
1_555
D
TRP
13
D
TRP
13
51
1_555
D
DLE
14
D
DLE
14
51
1_555
D
TRP
15
D
TRP
15
51
1_555
D
ETA
16
D
ETA
16
51
1_555
D
RB
1016
V
RB
51
1_555
D
RB
1017
W
RB
51
1_555
D
RB
1018
X
RB
51
1_555
D
CL
1019
Y
CL
51
1_555
D
HOH
2003
CA
HOH
51
1_555
A
DVA
6
A
DVA
6
48
3_646
A
VAL
7
A
VAL
7
48
1_545
A
TRP
11
A
TRP
11
48
1_555
A
TRP
13
A
TRP
13
48
4_556
A
DLE
14
A
DLE
14
48
1_545
A
ETA
16
A
ETA
16
48
4_456
A
CL
1019
G
CL
48
4_556
B
DVA
6
B
DVA
6
48
4_456
B
TRP
9
B
TRP
9
48
3_646
B
DLE
10
B
DLE
10
48
3_646
B
TRP
11
B
TRP
11
48
3_646
B
TRP
11
B
TRP
11
48
1_555
B
DLE
12
B
DLE
12
48
1_555
B
TRP
13
B
TRP
13
48
3_746
B
DLE
14
B
DLE
14
48
3_746
B
TRP
15
B
TRP
15
48
1_545
B
CL
1019
L
CL
48
1_555
B
CL
1019
L
CL
48
3_646
B
CL
1020
M
CL
48
1_545
C
GLY
2
C
GLY
2
48
2_654
C
GLY
2
C
GLY
2
48
1_555
C
ALA
3
C
ALA
3
48
2_654
C
ALA
3
C
ALA
3
48
1_555
C
DLE
4
C
DLE
4
48
1_555
C
ALA
5
C
ALA
5
48
1_555
C
DVA
6
C
DVA
6
48
1_555
C
VAL
7
C
VAL
7
48
1_555
C
DVA
8
C
DVA
8
48
1_555
C
TRP
9
C
TRP
9
48
1_555
C
DLE
10
C
DLE
10
48
1_555
C
TRP
11
C
TRP
11
48
1_555
C
DLE
12
C
DLE
12
48
1_555
C
TRP
13
C
TRP
13
48
1_555
C
DLE
14
C
DLE
14
48
1_555
C
TRP
15
C
TRP
15
48
1_555
C
ETA
16
C
ETA
16
48
1_555
C
EOH
1017
P
EOH
48
1_555
C
RB
1018
Q
RB
48
1_555
C
RB
1019
R
RB
48
1_555
C
RB
1020
S
RB
48
1_555
C
RB
1022
U
RB
48
1_555
D
RB
1016
V
RB
48
1_555
D
RB
1017
W
RB
48
1_555
D
RB
1018
X
RB
48
1_555
D
CL
1019
Y
CL
48
1_555
D
HOH
2003
CA
HOH
48
1_555
D
HOH
2006
CA
HOH
48
1_555
D
HOH
2009
CA
HOH
48
1_555
19
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