0.005941 0.000000 0.000000 0.000000 0.005941 0.000000 0.000000 0.000000 0.005941 0.00000 0.00000 0.00000 Akutsu, M. Kawasaki, M. Katoh, Y. Shiba, T. Yamaguchi, Y. Kato, R. Kato, K. Nakayama, K. Wakatsuki, S. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 96 90.00 90.00 90.00 168.317 168.317 168.317 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 R C N 309 N O N 310 N C N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C Y 326 N C Y 327 N C Y 328 N C Y 329 N C Y 330 N C Y 331 N C N 332 N O N 333 N O N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N N N 346 S C N 347 N C N 348 N O N 349 N C N 350 N C N 351 N C N 352 N O N 353 N H N 354 N H N 355 N H N 356 N H N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing Y 317 N doub Y 318 N sing Y 319 N sing N 320 N sing Y 321 N doub N 322 N sing Y 323 N doub N 324 N sing Y 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N doub N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing NE Febs Lett. FEBLAL 0165 0014-5793 579 5385 5391 10.1016/j.febslet.2005.08.076 16199040 Structural basis for recognition of ubiquitinated cargo by Tom1-GAT domain. 2005 10.2210/pdb1wrd/pdb pdb_00001wrd 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 100 1 1 CCD 2004-06-15 ADSC QUANTUM 4 CCD 2004-06-02 ADSC QUANTUM 210 Si(111) SINGLE WAVELENGTH M x-ray 1 Si(111) MAD M x-ray 1 0.9780 1.0 0.9791 1.0 0.9794 1.0 0.985 1.0 BL-6A Photon Factory 0.9780 SYNCHROTRON PHOTON FACTORY BEAMLINE BL-6A AR-NW12A Photon Factory 0.9791, 0.9794, 0.985 SYNCHROTRON PHOTON FACTORY BEAMLINE AR-NW12A 11802.447 Target of Myb protein 1 GAT domain 1 man polymer 8576.831 Ubiquitin 1 nat polymer 18.015 water 289 nat water Tom1 no no GPLGSEQIGKLRSELEMVSGNVRVMSEMLTELVPTQAEPADLELLQELNRTCRAMQQRVLELIPQIANEQLTEELLIVND NLNNVFLRHERFERFRTGQTTKA GPLGSEQIGKLRSELEMVSGNVRVMSEMLTELVPTQAEPADLELLQELNRTCRAMQQRVLELIPQIANEQLTEELLIVND NLNNVFLRHERFERFRTGQTTKA A polypeptide(L) no no MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia sample 9606 Homo sapiens 562 Escherichia coli DL41 PLASMID pGEX-4T-2 cattle Bos sample 9913 Bos taurus red blood cells 2 2.44 49.6 VAPOR DIFFUSION, HANGING DROP 6.5 sodium citrate, cacodylate, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K 293 chem_comp_atom chem_comp_bond database_2 struct_ref_seq_dif repository Initial release Version format compliance Derived calculations Version format compliance Data collection Database references 1 0 2005-10-11 1 1 2008-04-30 1 2 2011-07-13 1 3 2024-03-13 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details PDBJ Y PDBJ 2004-10-14 REL REL HOH water HOH 6 3 HOH HOH 313 A HOH 10 3 HOH HOH 314 A HOH 11 3 HOH HOH 315 A HOH 12 3 HOH HOH 316 A HOH 15 3 HOH HOH 317 A HOH 35 3 HOH HOH 318 A HOH 40 3 HOH HOH 319 A HOH 53 3 HOH HOH 320 A HOH 58 3 HOH HOH 321 A HOH 59 3 HOH HOH 322 A HOH 60 3 HOH HOH 323 A HOH 63 3 HOH HOH 324 A HOH 64 3 HOH HOH 325 A HOH 67 3 HOH HOH 326 A HOH 90 3 HOH HOH 327 A HOH 94 3 HOH HOH 328 A HOH 95 3 HOH HOH 329 A HOH 96 3 HOH HOH 330 A HOH 98 3 HOH HOH 331 A HOH 99 3 HOH HOH 332 A HOH 100 3 HOH HOH 333 A HOH 101 3 HOH HOH 334 A HOH 102 3 HOH HOH 335 A HOH 103 3 HOH HOH 336 A HOH 104 3 HOH HOH 337 A HOH 105 3 HOH HOH 338 A HOH 106 3 HOH HOH 339 A HOH 107 3 HOH HOH 340 A HOH 108 3 HOH HOH 341 A HOH 109 3 HOH HOH 342 A HOH 110 3 HOH HOH 343 A HOH 111 3 HOH HOH 344 A HOH 112 3 HOH HOH 345 A HOH 113 3 HOH HOH 346 A HOH 114 3 HOH HOH 347 A HOH 115 3 HOH HOH 348 A HOH 116 3 HOH HOH 349 A HOH 117 3 HOH HOH 350 A HOH 118 3 HOH HOH 351 A HOH 119 3 HOH HOH 352 A HOH 120 3 HOH HOH 353 A HOH 121 3 HOH HOH 354 A HOH 122 3 HOH HOH 355 A HOH 123 3 HOH HOH 356 A HOH 124 3 HOH HOH 357 A HOH 125 3 HOH HOH 358 A HOH 126 3 HOH HOH 359 A HOH 127 3 HOH HOH 360 A HOH 128 3 HOH HOH 361 A HOH 129 3 HOH HOH 362 A HOH 130 3 HOH HOH 363 A HOH 131 3 HOH HOH 364 A HOH 132 3 HOH HOH 365 A HOH 133 3 HOH HOH 366 A HOH 134 3 HOH HOH 367 A HOH 135 3 HOH HOH 368 A HOH 136 3 HOH HOH 369 A HOH 137 3 HOH HOH 370 A HOH 138 3 HOH HOH 371 A HOH 139 3 HOH HOH 372 A HOH 140 3 HOH HOH 373 A HOH 141 3 HOH HOH 374 A HOH 142 3 HOH HOH 375 A HOH 143 3 HOH HOH 376 A HOH 144 3 HOH HOH 377 A HOH 145 3 HOH HOH 378 A HOH 146 3 HOH HOH 379 A HOH 147 3 HOH HOH 380 A HOH 148 3 HOH HOH 381 A HOH 149 3 HOH HOH 382 A HOH 150 3 HOH HOH 383 A HOH 151 3 HOH HOH 384 A HOH 152 3 HOH HOH 385 A HOH 153 3 HOH HOH 386 A HOH 154 3 HOH HOH 387 A HOH 155 3 HOH HOH 388 A HOH 156 3 HOH HOH 389 A HOH 157 3 HOH HOH 390 A HOH 158 3 HOH HOH 391 A HOH 159 3 HOH HOH 392 A HOH 160 3 HOH HOH 393 A HOH 161 3 HOH HOH 394 A HOH 162 3 HOH HOH 395 A HOH 163 3 HOH HOH 396 A HOH 164 3 HOH HOH 397 A HOH 165 3 HOH HOH 398 A HOH 166 3 HOH HOH 399 A HOH 167 3 HOH HOH 400 A HOH 168 3 HOH HOH 401 A HOH 169 3 HOH HOH 402 A HOH 170 3 HOH HOH 403 A HOH 171 3 HOH HOH 404 A HOH 172 3 HOH HOH 405 A HOH 173 3 HOH HOH 406 A HOH 174 3 HOH HOH 407 A HOH 175 3 HOH HOH 408 A HOH 176 3 HOH HOH 409 A HOH 177 3 HOH HOH 410 A HOH 178 3 HOH HOH 411 A HOH 179 3 HOH HOH 412 A HOH 180 3 HOH HOH 413 A HOH 206 3 HOH HOH 414 A HOH 207 3 HOH HOH 415 A HOH 208 3 HOH HOH 416 A HOH 220 3 HOH HOH 417 A HOH 221 3 HOH HOH 418 A HOH 222 3 HOH HOH 419 A HOH 223 3 HOH HOH 420 A HOH 224 3 HOH HOH 421 A HOH 225 3 HOH HOH 422 A HOH 226 3 HOH HOH 423 A HOH 227 3 HOH HOH 424 A HOH 228 3 HOH HOH 425 A HOH 230 3 HOH HOH 426 A HOH 231 3 HOH HOH 427 A HOH 232 3 HOH HOH 428 A HOH 233 3 HOH HOH 429 A HOH 234 3 HOH HOH 430 A HOH 235 3 HOH HOH 431 A HOH 236 3 HOH HOH 432 A HOH 237 3 HOH HOH 433 A HOH 238 3 HOH HOH 434 A HOH 239 3 HOH HOH 435 A HOH 240 3 HOH HOH 436 A HOH 241 3 HOH HOH 437 A HOH 242 3 HOH HOH 438 A HOH 243 3 HOH HOH 439 A HOH 244 3 HOH HOH 440 A HOH 245 3 HOH HOH 441 A HOH 247 3 HOH HOH 442 A HOH 248 3 HOH HOH 443 A HOH 250 3 HOH HOH 444 A HOH 251 3 HOH HOH 445 A HOH 253 3 HOH HOH 446 A HOH 254 3 HOH HOH 447 A HOH 259 3 HOH HOH 448 A HOH 266 3 HOH HOH 449 A HOH 267 3 HOH HOH 450 A HOH 268 3 HOH HOH 451 A HOH 269 3 HOH HOH 452 A HOH 270 3 HOH HOH 453 A HOH 271 3 HOH HOH 454 A HOH 272 3 HOH HOH 455 A HOH 273 3 HOH HOH 456 A HOH 274 3 HOH HOH 457 A HOH 275 3 HOH HOH 458 A HOH 278 3 HOH HOH 459 A HOH 281 3 HOH HOH 460 A HOH 282 3 HOH HOH 461 A HOH 283 3 HOH HOH 462 A HOH 284 3 HOH HOH 463 A HOH 285 3 HOH HOH 464 A HOH 286 3 HOH HOH 465 A HOH 287 3 HOH HOH 466 A HOH 288 3 HOH HOH 467 A HOH 289 3 HOH HOH 468 A HOH 1 3 HOH HOH 77 B HOH 2 3 HOH HOH 78 B HOH 3 3 HOH HOH 79 B HOH 4 3 HOH HOH 80 B HOH 5 3 HOH HOH 81 B HOH 7 3 HOH HOH 82 B HOH 8 3 HOH HOH 83 B HOH 9 3 HOH HOH 84 B HOH 13 3 HOH HOH 85 B HOH 14 3 HOH HOH 86 B HOH 16 3 HOH HOH 87 B HOH 17 3 HOH HOH 88 B HOH 18 3 HOH HOH 89 B HOH 19 3 HOH HOH 90 B HOH 20 3 HOH HOH 91 B HOH 21 3 HOH HOH 92 B HOH 22 3 HOH HOH 93 B HOH 23 3 HOH HOH 94 B HOH 24 3 HOH HOH 95 B HOH 25 3 HOH HOH 96 B HOH 26 3 HOH HOH 97 B HOH 27 3 HOH HOH 98 B HOH 28 3 HOH HOH 99 B HOH 29 3 HOH HOH 100 B HOH 30 3 HOH HOH 101 B HOH 31 3 HOH HOH 102 B HOH 32 3 HOH HOH 103 B HOH 33 3 HOH HOH 104 B HOH 34 3 HOH HOH 105 B HOH 36 3 HOH HOH 106 B HOH 37 3 HOH HOH 107 B HOH 38 3 HOH HOH 108 B HOH 39 3 HOH HOH 109 B HOH 41 3 HOH HOH 110 B HOH 42 3 HOH HOH 111 B HOH 43 3 HOH HOH 112 B HOH 44 3 HOH HOH 113 B HOH 45 3 HOH HOH 114 B HOH 46 3 HOH HOH 115 B HOH 47 3 HOH HOH 116 B HOH 48 3 HOH HOH 117 B HOH 49 3 HOH HOH 118 B HOH 50 3 HOH HOH 119 B HOH 51 3 HOH HOH 120 B HOH 52 3 HOH HOH 121 B HOH 54 3 HOH HOH 122 B HOH 55 3 HOH HOH 123 B HOH 56 3 HOH HOH 124 B HOH 57 3 HOH HOH 125 B HOH 61 3 HOH HOH 126 B HOH 62 3 HOH HOH 127 B HOH 65 3 HOH HOH 128 B HOH 66 3 HOH HOH 129 B HOH 68 3 HOH HOH 130 B HOH 69 3 HOH HOH 131 B HOH 70 3 HOH HOH 132 B HOH 71 3 HOH HOH 133 B HOH 72 3 HOH HOH 134 B HOH 73 3 HOH HOH 135 B HOH 74 3 HOH HOH 136 B HOH 75 3 HOH HOH 137 B HOH 76 3 HOH HOH 138 B HOH 77 3 HOH HOH 139 B HOH 78 3 HOH HOH 140 B HOH 79 3 HOH HOH 141 B HOH 80 3 HOH HOH 142 B HOH 81 3 HOH HOH 143 B HOH 82 3 HOH HOH 144 B HOH 83 3 HOH HOH 145 B HOH 84 3 HOH HOH 146 B HOH 85 3 HOH HOH 147 B HOH 86 3 HOH HOH 148 B HOH 87 3 HOH HOH 149 B HOH 88 3 HOH HOH 150 B HOH 89 3 HOH HOH 151 B HOH 91 3 HOH HOH 152 B HOH 92 3 HOH HOH 153 B HOH 93 3 HOH HOH 154 B HOH 97 3 HOH HOH 155 B HOH 181 3 HOH HOH 156 B HOH 182 3 HOH HOH 157 B HOH 183 3 HOH HOH 158 B HOH 184 3 HOH HOH 159 B HOH 185 3 HOH HOH 160 B HOH 186 3 HOH HOH 161 B HOH 187 3 HOH HOH 162 B HOH 188 3 HOH HOH 163 B HOH 189 3 HOH HOH 164 B HOH 190 3 HOH HOH 165 B HOH 191 3 HOH HOH 166 B HOH 192 3 HOH HOH 167 B HOH 193 3 HOH HOH 168 B HOH 194 3 HOH HOH 169 B HOH 195 3 HOH HOH 170 B HOH 196 3 HOH HOH 171 B HOH 197 3 HOH HOH 172 B HOH 198 3 HOH HOH 173 B HOH 199 3 HOH HOH 174 B HOH 200 3 HOH HOH 175 B HOH 201 3 HOH HOH 176 B HOH 202 3 HOH HOH 177 B HOH 203 3 HOH HOH 178 B HOH 204 3 HOH HOH 179 B HOH 205 3 HOH HOH 180 B HOH 209 3 HOH HOH 181 B HOH 210 3 HOH HOH 182 B HOH 211 3 HOH HOH 183 B HOH 212 3 HOH HOH 184 B HOH 213 3 HOH HOH 185 B HOH 214 3 HOH HOH 186 B HOH 215 3 HOH HOH 187 B HOH 216 3 HOH HOH 188 B HOH 217 3 HOH HOH 189 B HOH 218 3 HOH HOH 190 B HOH 219 3 HOH HOH 191 B HOH 229 3 HOH HOH 192 B HOH 246 3 HOH HOH 193 B HOH 249 3 HOH HOH 194 B HOH 252 3 HOH HOH 195 B HOH 255 3 HOH HOH 196 B HOH 256 3 HOH HOH 197 B HOH 257 3 HOH HOH 198 B HOH 258 3 HOH HOH 199 B HOH 260 3 HOH HOH 200 B HOH 261 3 HOH HOH 201 B HOH 262 3 HOH HOH 202 B HOH 263 3 HOH HOH 203 B HOH 264 3 HOH HOH 204 B HOH 265 3 HOH HOH 205 B HOH 276 3 HOH HOH 206 B HOH 277 3 HOH HOH 207 B HOH 279 3 HOH HOH 208 B HOH 280 3 HOH HOH 209 B GLY 210 n 1 GLY 210 A PRO 211 n 2 PRO 211 A LEU 212 n 3 LEU 212 A GLY 213 n 4 GLY 213 A SER 214 n 5 SER 214 A GLU 215 n 6 GLU 215 A GLN 216 n 7 GLN 216 A ILE 217 n 8 ILE 217 A GLY 218 n 9 GLY 218 A LYS 219 n 10 LYS 219 A LEU 220 n 11 LEU 220 A ARG 221 n 12 ARG 221 A SER 222 n 13 SER 222 A GLU 223 n 14 GLU 223 A LEU 224 n 15 LEU 224 A GLU 225 n 16 GLU 225 A MET 226 n 17 MET 226 A VAL 227 n 18 VAL 227 A SER 228 n 19 SER 228 A GLY 229 n 20 GLY 229 A ASN 230 n 21 ASN 230 A VAL 231 n 22 VAL 231 A ARG 232 n 23 ARG 232 A VAL 233 n 24 VAL 233 A MET 234 n 25 MET 234 A SER 235 n 26 SER 235 A GLU 236 n 27 GLU 236 A MET 237 n 28 MET 237 A LEU 238 n 29 LEU 238 A THR 239 n 30 THR 239 A GLU 240 n 31 GLU 240 A LEU 241 n 32 LEU 241 A VAL 242 n 33 VAL 242 A PRO 243 n 34 PRO 243 A THR 244 n 35 THR 244 A GLN 245 n 36 GLN 245 A ALA 246 n 37 ALA 246 A GLU 247 n 38 GLU 247 A PRO 248 n 39 PRO 248 A ALA 249 n 40 ALA 249 A ASP 250 n 41 ASP 250 A LEU 251 n 42 LEU 251 A GLU 252 n 43 GLU 252 A LEU 253 n 44 LEU 253 A LEU 254 n 45 LEU 254 A GLN 255 n 46 GLN 255 A GLU 256 n 47 GLU 256 A LEU 257 n 48 LEU 257 A ASN 258 n 49 ASN 258 A ARG 259 n 50 ARG 259 A THR 260 n 51 THR 260 A CYS 261 n 52 CYS 261 A ARG 262 n 53 ARG 262 A ALA 263 n 54 ALA 263 A MET 264 n 55 MET 264 A GLN 265 n 56 GLN 265 A GLN 266 n 57 GLN 266 A ARG 267 n 58 ARG 267 A VAL 268 n 59 VAL 268 A LEU 269 n 60 LEU 269 A GLU 270 n 61 GLU 270 A LEU 271 n 62 LEU 271 A ILE 272 n 63 ILE 272 A PRO 273 n 64 PRO 273 A GLN 274 n 65 GLN 274 A ILE 275 n 66 ILE 275 A ALA 276 n 67 ALA 276 A ASN 277 n 68 ASN 277 A GLU 278 n 69 GLU 278 A GLN 279 n 70 GLN 279 A LEU 280 n 71 LEU 280 A THR 281 n 72 THR 281 A GLU 282 n 73 GLU 282 A GLU 283 n 74 GLU 283 A LEU 284 n 75 LEU 284 A LEU 285 n 76 LEU 285 A ILE 286 n 77 ILE 286 A VAL 287 n 78 VAL 287 A ASN 288 n 79 ASN 288 A ASP 289 n 80 ASP 289 A ASN 290 n 81 ASN 290 A LEU 291 n 82 LEU 291 A ASN 292 n 83 ASN 292 A ASN 293 n 84 ASN 293 A VAL 294 n 85 VAL 294 A PHE 295 n 86 PHE 295 A LEU 296 n 87 LEU 296 A ARG 297 n 88 ARG 297 A HIS 298 n 89 HIS 298 A GLU 299 n 90 GLU 299 A ARG 300 n 91 ARG 300 A PHE 301 n 92 PHE 301 A GLU 302 n 93 GLU 302 A ARG 303 n 94 ARG 303 A PHE 304 n 95 PHE 304 A ARG 305 n 96 ARG 305 A THR 306 n 97 THR 306 A GLY 307 n 98 GLY 307 A n 99 308 A n 100 309 A n 101 310 A n 102 311 A n 103 312 A MET 1 n 1 MET 1 B GLN 2 n 2 GLN 2 B ILE 3 n 3 ILE 3 B PHE 4 n 4 PHE 4 B VAL 5 n 5 VAL 5 B LYS 6 n 6 LYS 6 B THR 7 n 7 THR 7 B LEU 8 n 8 LEU 8 B THR 9 n 9 THR 9 B GLY 10 n 10 GLY 10 B LYS 11 n 11 LYS 11 B THR 12 n 12 THR 12 B ILE 13 n 13 ILE 13 B THR 14 n 14 THR 14 B LEU 15 n 15 LEU 15 B GLU 16 n 16 GLU 16 B VAL 17 n 17 VAL 17 B GLU 18 n 18 GLU 18 B PRO 19 n 19 PRO 19 B SER 20 n 20 SER 20 B ASP 21 n 21 ASP 21 B THR 22 n 22 THR 22 B ILE 23 n 23 ILE 23 B GLU 24 n 24 GLU 24 B ASN 25 n 25 ASN 25 B VAL 26 n 26 VAL 26 B LYS 27 n 27 LYS 27 B ALA 28 n 28 ALA 28 B LYS 29 n 29 LYS 29 B ILE 30 n 30 ILE 30 B GLN 31 n 31 GLN 31 B ASP 32 n 32 ASP 32 B LYS 33 n 33 LYS 33 B GLU 34 n 34 GLU 34 B GLY 35 n 35 GLY 35 B ILE 36 n 36 ILE 36 B PRO 37 n 37 PRO 37 B PRO 38 n 38 PRO 38 B ASP 39 n 39 ASP 39 B GLN 40 n 40 GLN 40 B GLN 41 n 41 GLN 41 B ARG 42 n 42 ARG 42 B LEU 43 n 43 LEU 43 B ILE 44 n 44 ILE 44 B PHE 45 n 45 PHE 45 B ALA 46 n 46 ALA 46 B GLY 47 n 47 GLY 47 B LYS 48 n 48 LYS 48 B GLN 49 n 49 GLN 49 B LEU 50 n 50 LEU 50 B GLU 51 n 51 GLU 51 B ASP 52 n 52 ASP 52 B GLY 53 n 53 GLY 53 B ARG 54 n 54 ARG 54 B THR 55 n 55 THR 55 B LEU 56 n 56 LEU 56 B SER 57 n 57 SER 57 B ASP 58 n 58 ASP 58 B TYR 59 n 59 TYR 59 B ASN 60 n 60 ASN 60 B ILE 61 n 61 ILE 61 B GLN 62 n 62 GLN 62 B LYS 63 n 63 LYS 63 B GLU 64 n 64 GLU 64 B SER 65 n 65 SER 65 B THR 66 n 66 THR 66 B LEU 67 n 67 LEU 67 B HIS 68 n 68 HIS 68 B LEU 69 n 69 LEU 69 B VAL 70 n 70 VAL 70 B LEU 71 n 71 LEU 71 B ARG 72 n 72 ARG 72 B LEU 73 n 73 LEU 73 B ARG 74 n 74 ARG 74 B GLY 75 n 75 GLY 75 B GLY 76 n 76 GLY 76 B author_and_software_defined_assembly PQS 2 dimeric software_defined_assembly PISA 48 48-meric 96140 -362 167620 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_665 -x+1,-y+1,z crystal symmetry operation 168.3170000000 168.3170000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 3_655 -x+1,y,-z crystal symmetry operation 168.3170000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 4_565 x,-y+1,-z crystal symmetry operation 0.0000000000 168.3170000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 13_555 y,x,-z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 14_665 -y+1,-x+1,-z crystal symmetry operation 168.3170000000 168.3170000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 15_565 y,-x+1,z crystal symmetry operation 0.0000000000 168.3170000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 16_655 -y+1,x,z crystal symmetry operation 168.3170000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1.0000000000 0.0000000000 0.0000000000 33_554 y,z+1/2,x-1/2 crystal symmetry operation 0.0000000000 84.1585000000 -84.1585000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 -1.0000000000 0.0000000000 0.0000000000 34_655 -y+1,z+1/2,-x+1/2 crystal symmetry operation 168.3170000000 84.1585000000 84.1585000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -1.0000000000 0.0000000000 0.0000000000 35_555 y,-z+1/2,-x+1/2 crystal symmetry operation 0.0000000000 84.1585000000 84.1585000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 1.0000000000 0.0000000000 0.0000000000 36_654 -y+1,-z+1/2,x-1/2 crystal symmetry operation 168.3170000000 84.1585000000 -84.1585000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 -1.0000000000 0.0000000000 41_555 x,z+1/2,-y+1/2 crystal symmetry operation 0.0000000000 84.1585000000 84.1585000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 1.0000000000 0.0000000000 42_654 -x+1,z+1/2,y-1/2 crystal symmetry operation 168.3170000000 84.1585000000 -84.1585000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 -1.0000000000 0.0000000000 43_655 -x+1,-z+1/2,-y+1/2 crystal symmetry operation 168.3170000000 84.1585000000 84.1585000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 1.0000000000 0.0000000000 44_554 x,-z+1/2,y-1/2 crystal symmetry operation 0.0000000000 84.1585000000 -84.1585000000 0.0000000000 0.0000000000 1.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 53_554 z+1/2,x,y-1/2 crystal symmetry operation 84.1585000000 0.0000000000 -84.1585000000 0.0000000000 0.0000000000 1.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 54_565 z+1/2,-x+1,-y+1/2 crystal symmetry operation 84.1585000000 168.3170000000 84.1585000000 0.0000000000 0.0000000000 -1.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 55_564 -z+1/2,-x+1,y-1/2 crystal symmetry operation 84.1585000000 168.3170000000 -84.1585000000 0.0000000000 0.0000000000 -1.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 56_555 -z+1/2,x,-y+1/2 crystal symmetry operation 84.1585000000 0.0000000000 84.1585000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 69_555 z+1/2,y,-x+1/2 crystal symmetry operation 84.1585000000 0.0000000000 84.1585000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 -1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 70_564 z+1/2,-y+1,x-1/2 crystal symmetry operation 84.1585000000 168.3170000000 -84.1585000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 71_554 -z+1/2,y,x-1/2 crystal symmetry operation 84.1585000000 0.0000000000 -84.1585000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 -1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 72_565 -z+1/2,-y+1,-x+1/2 crystal symmetry operation 84.1585000000 168.3170000000 84.1585000000 B O ILE 13 B O ILE 13 B N VAL 5 B N VAL 5 B N PHE 4 B N PHE 4 B O LEU 67 B O LEU 67 B O VAL 70 B O VAL 70 B N ARG 42 B N ARG 42 B N PHE 45 B N PHE 45 B O LYS 48 B O LYS 48 1 A HOH 408 C HOH 1 A HOH 409 C HOH 1 A GLN 308 A GLN 99 1 Y 1 A THR 309 A THR 100 1 Y 1 A THR 310 A THR 101 1 Y 1 A LYS 311 A LYS 102 1 Y 1 A ALA 312 A ALA 103 1 Y 1 B GLN 62 -111.09 -165.10 0.259 0.213 0.214 0.214 1.75 28.45 1059 21120 20997 99.5 RANDOM 1 1 MAD Engh & Huber 1.75 28.45 289 1677 0 0 1388 0.004 1.031 1.75 50 1WRD 21120 20997 1 0.057 1,2 20.9 14.7 99.5 0.421 1.75 1.81 8.2 1,2 99.4 data collection HKL-2000 data reduction HKL-2000 phasing SOLVE refinement CNS 1.0 data scaling HKL-2000 Crystal structure of Tom1 GAT domain in complex with ubiquitin 1 N N 2 N N 3 N N 3 N N A GLN 216 A GLN 7 HELX_P A LEU 241 A LEU 32 1 1 26 A GLU 247 A GLU 38 HELX_P A ILE 275 A ILE 66 1 2 29 A ASN 277 A ASN 68 HELX_P A THR 306 A THR 97 1 3 30 B THR 22 B THR 22 HELX_P B GLY 35 B GLY 35 1 4 14 B PRO 37 B PRO 37 HELX_P B ASP 39 B ASP 39 5 5 3 PROTEIN TRANSPORT/SIGNALING PROTEIN THREE-HELIX BUNDLE, UBIQUITIN-BINDING PROTEIN, PROTEIN TRANSPORT-SIGNALING PROTEIN COMPLEX TOM1_HUMAN UNP 1 215 O60784 EQIGKLRSELEMVSGNVRVMSEMLTELVPTQAEPADLELLQELNRTCRAMQQRVLELIPQIANEQLTEELLIVNDNLNNV FLRHERFERFRTGQTTKA UBIQ_BOVIN UNP 2 1 P62990 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 215 312 1WRD 215 312 O60784 A 1 6 103 1 76 1WRD 1 76 P62990 B 2 1 76 1 cloning artifact GLY 210 1WRD A O60784 UNP 1 1 cloning artifact PRO 211 1WRD A O60784 UNP 2 1 cloning artifact LEU 212 1WRD A O60784 UNP 3 1 cloning artifact GLY 213 1WRD A O60784 UNP 4 1 cloning artifact SER 214 1WRD A O60784 UNP 5 5 anti-parallel parallel anti-parallel anti-parallel B THR 12 B THR 12 B GLU 16 B GLU 16 B GLN 2 B GLN 2 B THR 7 B THR 7 B THR 66 B THR 66 B LEU 71 B LEU 71 B GLN 41 B GLN 41 B PHE 45 B PHE 45 B LYS 48 B LYS 48 B GLN 49 B GLN 49 209 F 4 3 2