1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Day, C.L.
Chen, L.
Richardson, S.J.
Harrison, P.J.
Huang, D.C.
Hinds, M.G.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
280
4738
4744
10.1074/jbc.M411434200
15550399
Solution Structure of Prosurvival Mcl-1 and Characterization of Its Binding by Proapoptotic BH3-only Ligands
2005
10.2210/pdb1wsx/pdb
pdb_00001wsx
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
1
1.0
18260.670
myeloid cell leukemia sequence 1
residues 152-308
1
man
polymer
Myeloid Cell Leukemia-1
no
no
GPLGSEDDLYRQSLEIISRYLREQATGSKDSKPLGEAGAAGRRALETLRRVGDGVQRNHETAFQGMLRKLDIKNEGDVKS
FSRVMVHVFKDGVTNWGRIVTLISFGAFVAKHLKSVNQESFIEPLAETITDVLVRTKRDWLVKQRGWDGFVEFFHVQDLE
GG
GPLGSEDDLYRQSLEIISRYLREQATGSKDSKPLGEAGAAGRRALETLRRVGDGVQRNHETAFQGMLRKLDIKNEGDVKS
FSRVMVHVFKDGVTNWGRIVTLISFGAFVAKHLKSVNQESFIEPLAETITDVLVRTKRDWLVKQRGWDGFVEFFHVQDLE
GG
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
house mouse
Mus
Escherichia
Escherichia coli
sample
mcl-1
10090
Mus musculus
469008
Escherichia coli BL21(DE3)
BL21(DE3)
PGEX6P-3
PLASMID
database_2
pdbx_nmr_software
pdbx_struct_assembly
pdbx_struct_oper_list
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2004-11-23
1
1
2008-04-30
1
2
2011-07-13
1
3
2022-03-02
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
_struct_ref_seq_dif.details
PDBJ
Y
PDBJ
2004-11-12
REL
the structure was determined using standard 3D heteronuclar NMR techniques.
structures with the lowest energy, structures with the least restraint violations, structures with acceptable covalent geometry
256
20
HNHA
3D_15N-separated_NOESY
3D_13C-separated_NOESY
120mM
6.7
ambient
298
K
The structures are based on a total of 3974 constaints, 3507 are NOE-derived distance constraints, 335 dihedral angle restraints and 66 hydrogen bond constraints
torsion angle dynamics, distance geometry, simulated annealing
1
closest to the average
1mM U-15N Mcl-1
50mM Sodium Phoshate; 70mM Sodium Chloride; 0.04% Sodium Azide; 95% H2O, 5% D2O
1mM U-13C,15N Mcl-1
50mM Sodium Phoshate; 70mM Sodium Chloride; 0.04% Sodium Azide; 95% H2O, 5% D2O
Bruker AG
collection
XwinNMR
3.5
Bartels, C., Xia, T.H., Billeter, M., Guntert, P., and Wuthrich, K.
data analysis
XEASY
1.3.13
Guntert, P., Mumenthaler, C., Wuthrich, K.
structure solution
DYANA
1.5
C.D.SCHWIETERS,J.J.KUSZEWSKI,N.TJANDRA,G.M.CLORE
refinement
XPLOR-NIH
2
600
Bruker
DRX
500
Bruker
AV
GLY
147
n
1
GLY
147
A
PRO
148
n
2
PRO
148
A
LEU
149
n
3
LEU
149
A
GLY
150
n
4
GLY
150
A
SER
151
n
5
SER
151
A
GLU
152
n
6
GLU
152
A
ASP
153
n
7
ASP
153
A
ASP
154
n
8
ASP
154
A
LEU
155
n
9
LEU
155
A
TYR
156
n
10
TYR
156
A
ARG
157
n
11
ARG
157
A
GLN
158
n
12
GLN
158
A
SER
159
n
13
SER
159
A
LEU
160
n
14
LEU
160
A
GLU
161
n
15
GLU
161
A
ILE
162
n
16
ILE
162
A
ILE
163
n
17
ILE
163
A
SER
164
n
18
SER
164
A
ARG
165
n
19
ARG
165
A
TYR
166
n
20
TYR
166
A
LEU
167
n
21
LEU
167
A
ARG
168
n
22
ARG
168
A
GLU
169
n
23
GLU
169
A
GLN
170
n
24
GLN
170
A
ALA
171
n
25
ALA
171
A
THR
172
n
26
THR
172
A
GLY
173
n
27
GLY
173
A
SER
174
n
28
SER
174
A
LYS
175
n
29
LYS
175
A
ASP
176
n
30
ASP
176
A
SER
177
n
31
SER
177
A
LYS
178
n
32
LYS
178
A
PRO
179
n
33
PRO
179
A
LEU
180
n
34
LEU
180
A
GLY
181
n
35
GLY
181
A
GLU
182
n
36
GLU
182
A
ALA
183
n
37
ALA
183
A
GLY
184
n
38
GLY
184
A
ALA
185
n
39
ALA
185
A
ALA
186
n
40
ALA
186
A
GLY
187
n
41
GLY
187
A
ARG
188
n
42
ARG
188
A
ARG
189
n
43
ARG
189
A
ALA
190
n
44
ALA
190
A
LEU
191
n
45
LEU
191
A
GLU
192
n
46
GLU
192
A
THR
193
n
47
THR
193
A
LEU
194
n
48
LEU
194
A
ARG
195
n
49
ARG
195
A
ARG
196
n
50
ARG
196
A
VAL
197
n
51
VAL
197
A
GLY
198
n
52
GLY
198
A
ASP
199
n
53
ASP
199
A
GLY
200
n
54
GLY
200
A
VAL
201
n
55
VAL
201
A
GLN
202
n
56
GLN
202
A
ARG
203
n
57
ARG
203
A
ASN
204
n
58
ASN
204
A
HIS
205
n
59
HIS
205
A
GLU
206
n
60
GLU
206
A
THR
207
n
61
THR
207
A
ALA
208
n
62
ALA
208
A
PHE
209
n
63
PHE
209
A
GLN
210
n
64
GLN
210
A
GLY
211
n
65
GLY
211
A
MET
212
n
66
MET
212
A
LEU
213
n
67
LEU
213
A
ARG
214
n
68
ARG
214
A
LYS
215
n
69
LYS
215
A
LEU
216
n
70
LEU
216
A
ASP
217
n
71
ASP
217
A
ILE
218
n
72
ILE
218
A
LYS
219
n
73
LYS
219
A
ASN
220
n
74
ASN
220
A
GLU
221
n
75
GLU
221
A
GLY
222
n
76
GLY
222
A
ASP
223
n
77
ASP
223
A
VAL
224
n
78
VAL
224
A
LYS
225
n
79
LYS
225
A
SER
226
n
80
SER
226
A
PHE
227
n
81
PHE
227
A
SER
228
n
82
SER
228
A
ARG
229
n
83
ARG
229
A
VAL
230
n
84
VAL
230
A
MET
231
n
85
MET
231
A
VAL
232
n
86
VAL
232
A
HIS
233
n
87
HIS
233
A
VAL
234
n
88
VAL
234
A
PHE
235
n
89
PHE
235
A
LYS
236
n
90
LYS
236
A
ASP
237
n
91
ASP
237
A
GLY
238
n
92
GLY
238
A
VAL
239
n
93
VAL
239
A
THR
240
n
94
THR
240
A
ASN
241
n
95
ASN
241
A
TRP
242
n
96
TRP
242
A
GLY
243
n
97
GLY
243
A
ARG
244
n
98
ARG
244
A
ILE
245
n
99
ILE
245
A
VAL
246
n
100
VAL
246
A
THR
247
n
101
THR
247
A
LEU
248
n
102
LEU
248
A
ILE
249
n
103
ILE
249
A
SER
250
n
104
SER
250
A
PHE
251
n
105
PHE
251
A
GLY
252
n
106
GLY
252
A
ALA
253
n
107
ALA
253
A
PHE
254
n
108
PHE
254
A
VAL
255
n
109
VAL
255
A
ALA
256
n
110
ALA
256
A
LYS
257
n
111
LYS
257
A
HIS
258
n
112
HIS
258
A
LEU
259
n
113
LEU
259
A
LYS
260
n
114
LYS
260
A
SER
261
n
115
SER
261
A
VAL
262
n
116
VAL
262
A
ASN
263
n
117
ASN
263
A
GLN
264
n
118
GLN
264
A
GLU
265
n
119
GLU
265
A
SER
266
n
120
SER
266
A
PHE
267
n
121
PHE
267
A
ILE
268
n
122
ILE
268
A
GLU
269
n
123
GLU
269
A
PRO
270
n
124
PRO
270
A
LEU
271
n
125
LEU
271
A
ALA
272
n
126
ALA
272
A
GLU
273
n
127
GLU
273
A
THR
274
n
128
THR
274
A
ILE
275
n
129
ILE
275
A
THR
276
n
130
THR
276
A
ASP
277
n
131
ASP
277
A
VAL
278
n
132
VAL
278
A
LEU
279
n
133
LEU
279
A
VAL
280
n
134
VAL
280
A
ARG
281
n
135
ARG
281
A
THR
282
n
136
THR
282
A
LYS
283
n
137
LYS
283
A
ARG
284
n
138
ARG
284
A
ASP
285
n
139
ASP
285
A
TRP
286
n
140
TRP
286
A
LEU
287
n
141
LEU
287
A
VAL
288
n
142
VAL
288
A
LYS
289
n
143
LYS
289
A
GLN
290
n
144
GLN
290
A
ARG
291
n
145
ARG
291
A
GLY
292
n
146
GLY
292
A
TRP
293
n
147
TRP
293
A
ASP
294
n
148
ASP
294
A
GLY
295
n
149
GLY
295
A
PHE
296
n
150
PHE
296
A
VAL
297
n
151
VAL
297
A
GLU
298
n
152
GLU
298
A
PHE
299
n
153
PHE
299
A
PHE
300
n
154
PHE
300
A
HIS
301
n
155
HIS
301
A
VAL
302
n
156
VAL
302
A
GLN
303
n
157
GLN
303
A
ASP
304
n
158
ASP
304
A
LEU
305
n
159
LEU
305
A
GLU
306
n
160
GLU
306
A
GLY
307
n
161
GLY
307
A
GLY
308
n
162
GLY
308
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
8
A
A
HB3
H
LYS
ASP
175
176
1.30
1
A
GLU
152
-71.02
-149.74
1
A
GLU
182
-141.04
-44.58
1
A
GLU
206
-34.09
-35.95
1
A
ASP
217
-170.62
84.67
1
A
PHE
235
-97.66
39.70
1
A
ARG
291
41.15
24.33
1
A
TRP
293
-29.00
-63.51
1
A
GLN
303
-102.09
-69.62
2
A
GLU
152
-90.06
-153.50
2
A
LYS
175
-72.22
-124.61
2
A
LEU
180
-59.97
173.14
2
A
GLU
182
-150.04
-50.07
2
A
GLU
206
-34.53
-35.77
2
A
ASP
217
-166.70
72.11
2
A
LYS
236
-26.23
-79.15
2
A
ASP
237
-172.92
-70.13
2
A
ASN
263
65.35
60.23
2
A
ARG
291
43.88
23.51
3
A
ASP
153
-107.84
52.94
3
A
PRO
179
-48.19
157.25
3
A
GLU
206
-34.07
-35.09
3
A
ASP
217
-168.76
79.56
3
A
PHE
235
-92.94
39.46
3
A
ARG
291
43.92
23.91
3
A
HIS
301
-87.86
30.68
4
A
GLU
206
-34.14
-35.06
4
A
ASP
217
-162.97
76.95
4
A
PHE
235
-98.56
39.72
4
A
ASN
263
70.36
54.21
4
A
ARG
291
45.01
24.13
4
A
PHE
300
-115.68
50.66
5
A
ASP
153
-117.82
71.75
5
A
LEU
180
-65.35
-178.87
5
A
GLU
206
-34.41
-34.78
5
A
ASP
217
-164.41
73.88
5
A
ARG
291
44.43
22.17
5
A
PHE
300
-115.47
53.43
5
A
GLN
303
-102.25
-68.80
6
A
ASP
153
-95.87
56.66
6
A
GLU
206
-33.98
-35.43
6
A
ASP
217
-169.36
77.26
6
A
PHE
235
-97.21
39.71
6
A
ARG
291
39.75
26.66
6
A
TRP
293
-29.45
-64.12
7
A
SER
174
-144.18
21.02
7
A
LYS
175
-73.02
-119.45
7
A
GLU
182
-132.26
-33.54
7
A
GLU
206
-34.10
-35.42
7
A
ASP
217
-165.46
75.89
7
A
ARG
291
43.64
25.16
8
A
SER
174
-150.16
27.89
8
A
LYS
175
-71.26
-123.91
8
A
PRO
179
-41.41
155.62
8
A
LEU
180
-64.68
-158.30
8
A
GLU
206
-34.19
-36.25
8
A
ASP
217
-167.20
63.36
8
A
ASN
263
65.74
61.53
8
A
ARG
291
45.03
23.16
8
A
PHE
300
-117.60
53.58
9
A
GLU
152
-89.70
-77.00
9
A
ASP
153
-160.55
54.75
9
A
SER
174
-147.98
25.73
9
A
LYS
175
-70.12
-102.53
9
A
SER
177
-132.51
-35.82
9
A
PRO
179
-55.29
174.93
9
A
LEU
216
-75.42
-153.44
9
A
ASP
217
-167.53
75.27
9
A
PHE
235
-99.48
47.08
9
A
ARG
291
39.06
27.33
9
A
PHE
300
-118.77
51.46
10
A
TYR
156
-37.49
-39.86
10
A
GLU
206
-34.74
-33.89
10
A
ASP
217
-165.59
73.28
10
A
ASN
263
63.77
60.11
10
A
LYS
283
-99.20
38.47
10
A
ARG
291
40.38
25.07
11
A
LEU
180
-53.59
-77.71
11
A
GLU
206
-34.03
-35.86
11
A
ASP
217
-169.38
92.60
11
A
PHE
235
-96.73
39.54
11
A
ARG
291
44.83
24.04
12
A
PRO
148
-58.97
175.72
12
A
PRO
179
-59.99
-177.26
12
A
ALA
186
-68.04
-70.60
12
A
GLU
206
-34.40
-33.97
12
A
LEU
216
-64.72
-176.04
12
A
ASP
217
-167.04
55.37
12
A
PHE
235
-101.04
55.08
12
A
LYS
236
-49.64
-92.56
12
A
ARG
291
38.78
29.31
12
A
GLU
306
-144.32
-4.87
13
A
SER
174
-145.54
25.89
13
A
LYS
175
-72.02
-123.06
13
A
PRO
179
-58.39
178.60
13
A
LEU
180
-59.05
172.11
13
A
GLU
182
-150.06
-52.61
13
A
LEU
216
-70.39
-148.27
13
A
ASP
217
-168.99
58.98
13
A
ILE
218
-56.75
109.71
13
A
PHE
235
-103.38
50.50
13
A
LYS
236
-47.28
-89.60
13
A
ASN
263
62.69
60.35
13
A
ARG
291
46.14
23.19
13
A
TRP
293
-29.96
-59.19
13
A
PHE
300
-117.22
51.25
13
A
GLN
303
-120.05
-72.40
14
A
GLU
152
-90.32
-154.47
14
A
TYR
156
-38.35
-39.05
14
A
ASP
176
-61.56
-87.45
14
A
SER
177
-150.30
-89.52
14
A
GLU
206
-34.01
-35.92
14
A
ASP
217
-170.34
78.61
14
A
PHE
235
-99.09
39.74
14
A
ARG
291
45.88
22.96
15
A
GLU
152
-85.10
-77.84
15
A
GLU
206
-34.03
-35.18
15
A
ASP
217
-159.12
67.20
15
A
PHE
235
-98.52
39.83
15
A
ASN
263
70.49
54.02
15
A
GLN
264
-140.47
37.64
15
A
ARG
291
43.91
23.96
16
A
LEU
149
-142.91
14.32
16
A
PRO
179
-60.60
-175.32
16
A
GLU
206
-33.92
-35.79
16
A
ASP
217
-165.30
78.51
16
A
PHE
235
-95.93
39.82
16
A
ARG
291
44.24
22.37
16
A
GLN
303
-120.03
-67.96
17
A
TYR
156
-36.54
-36.56
17
A
GLU
206
-33.95
-37.88
17
A
ASP
217
-167.55
54.25
17
A
PHE
235
-95.92
40.44
17
A
ARG
291
44.55
26.09
18
A
SER
174
-145.48
25.53
18
A
LYS
175
-72.56
-114.96
18
A
PRO
179
-44.20
152.31
18
A
LEU
180
-58.05
176.08
18
A
GLU
206
-34.34
-34.10
18
A
ASP
217
-167.84
71.02
18
A
PHE
235
-105.30
57.63
18
A
LYS
236
-34.83
-82.49
18
A
ASP
237
-168.71
-77.81
18
A
ASN
263
65.14
60.30
18
A
ARG
291
40.28
26.23
18
A
TRP
293
-28.98
-64.72
19
A
GLU
152
-64.64
-149.25
19
A
TYR
156
-37.32
-38.79
19
A
GLU
206
-34.03
-35.71
19
A
ASP
217
-159.47
75.57
19
A
PHE
235
-97.24
39.67
19
A
ASN
263
62.95
60.73
19
A
ARG
291
40.52
24.88
19
A
TRP
293
-29.82
-64.42
20
A
ALA
183
-84.29
41.06
20
A
GLU
206
-34.00
-36.32
20
A
ASP
217
-169.37
79.12
20
A
PHE
235
-110.75
61.76
20
A
LYS
236
-47.07
-86.00
20
A
ASP
237
-174.10
123.05
20
A
ARG
291
46.25
23.09
20
A
PHE
300
-116.58
50.73
Solution structure of MCL-1
1
N
N
A
ASP
153
A
ASP
7
HELX_P
A
GLY
173
A
GLY
27
1
1
21
A
GLY
184
A
GLY
38
HELX_P
A
LEU
216
A
LEU
70
1
2
33
A
ASP
223
A
ASP
77
HELX_P
A
PHE
235
A
PHE
89
1
3
13
A
ASN
241
A
ASN
95
HELX_P
A
VAL
262
A
VAL
116
1
4
22
A
GLN
264
A
GLN
118
HELX_P
A
LYS
283
A
LYS
137
1
5
20
A
LYS
283
A
LYS
137
HELX_P
A
GLN
290
A
GLN
144
1
6
8
A
GLY
292
A
GLY
146
HELX_P
A
PHE
300
A
PHE
154
1
7
9
APOPTOSIS
helical bundle, apoptosis, Bcl-2, BH3, Mcl-1
MCL1_MOUSE
UNP
1
152
P97287
EDDLYRQSLEIISRYLREQATGSKDSKPLGEAGAAGRRALETLRRVGDGVQRNHETAFQGMLRKLDIKNEGDVKSFSRVM
VHVFKDGVTNWGRIVTLISFGAFVAKHLKSVNQESFIEPLAETITDVLVRTKRDWLVKQRGWDGFVEFFHVQDLEGG
152
308
1WSX
152
308
P97287
A
1
6
162
1
cloning artifact
GLY
147
1WSX
A
P97287
UNP
1
1
cloning artifact
PRO
148
1WSX
A
P97287
UNP
2
1
cloning artifact
LEU
149
1WSX
A
P97287
UNP
3
1
cloning artifact
GLY
150
1WSX
A
P97287
UNP
4
1
cloning artifact
SER
151
1WSX
A
P97287
UNP
5