0.017678
0.000000
0.000000
0.000000
0.013796
0.000000
0.000000
0.000000
0.012655
0.00000
0.00000
0.00000
Suzuki, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
56.569
72.487
79.020
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C4 H7 N O5
149.102
n
(3S)-3-hydroxy-L-aspartic acid
BETA-HYDROXYASPARTIC ACID
L-peptide linking
Ca 2
40.078
CALCIUM ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C26 H27 Cl N6 O3 S
539.049
5-CHLORO-2-({3-ISOBUTYL-4-[(5-PYRIDIN-4-YLPYRIMIDIN-2-YL)CARBONYL]PIPERAZIN-1-YL}SULFONYL)-1H-INDOLE
4-[(5-CHLOROINDOL-2-YL)SULFONYL]-2-(2-METHYLPROPYL)-1-[[5-(PYRIDIN-4-YL)PYRIMIDIN-2-YL]CARBONYL]PIPERAZINE
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
S
C
N
76
S
C
N
77
N
O
N
78
N
C
N
79
N
O
N
80
N
O
N
81
N
C
N
82
N
O
N
83
N
O
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
CA
N
92
N
N
N
93
R
C
N
94
N
C
N
95
N
O
N
96
N
C
N
97
N
S
N
98
N
O
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
R
C
N
107
N
C
N
108
N
N
N
109
N
C
N
110
N
C
N
111
S
N
N
112
N
S
N
113
N
O
N
114
N
O
Y
115
N
C
Y
116
N
C
Y
117
N
C
Y
118
N
C
Y
119
N
C
N
120
N
CL
Y
121
N
C
Y
122
N
N
Y
123
N
C
Y
124
N
C
N
125
N
C
N
126
N
O
Y
127
N
C
Y
128
N
N
Y
129
N
C
Y
130
N
C
Y
131
N
C
Y
132
N
N
Y
133
N
C
Y
134
N
C
Y
135
N
C
Y
136
N
N
Y
137
N
C
Y
138
N
C
N
139
N
C
N
140
N
C
N
141
N
C
N
142
N
C
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
N
N
171
S
C
N
172
N
C
N
173
N
O
N
174
N
C
N
175
N
C
N
176
N
C
N
177
N
O
N
178
N
N
N
179
N
O
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
N
N
191
S
C
N
192
N
C
N
193
N
O
N
194
N
C
N
195
N
C
N
196
N
C
N
197
N
O
N
198
N
O
N
199
N
O
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
N
N
210
N
C
N
211
N
C
N
212
N
O
N
213
N
O
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
N
N
220
S
C
N
221
N
C
N
222
N
O
N
223
N
C
Y
224
N
C
Y
225
N
N
Y
226
N
C
Y
227
N
C
Y
228
N
N
N
229
N
O
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
O
N
241
N
H
N
242
N
H
N
243
N
N
N
244
S
C
N
245
N
C
N
246
N
O
N
247
S
C
N
248
N
C
N
249
N
C
N
250
N
C
N
251
N
O
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
N
N
266
S
C
N
267
N
C
N
268
N
O
N
269
N
C
N
270
N
C
N
271
N
C
N
272
N
C
N
273
N
O
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
N
N
288
S
C
N
289
N
C
N
290
N
O
N
291
N
C
N
292
N
C
N
293
N
C
N
294
N
C
N
295
N
N
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
N
N
313
S
C
N
314
N
C
N
315
N
O
N
316
N
C
N
317
N
C
N
318
N
S
N
319
N
C
N
320
N
O
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
N
N
333
S
C
N
334
N
C
N
335
N
O
N
336
N
C
Y
337
N
C
Y
338
N
C
Y
339
N
C
Y
340
N
C
Y
341
N
C
Y
342
N
C
N
343
N
O
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
N
N
356
S
C
N
357
N
C
N
358
N
O
N
359
N
C
N
360
N
C
N
361
N
C
N
362
N
O
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
N
N
373
S
C
N
374
N
C
N
375
N
O
N
376
N
C
N
377
N
O
N
378
N
O
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
N
N
387
S
C
N
388
N
C
N
389
N
O
N
390
R
C
N
391
N
O
N
392
N
C
N
393
N
O
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
N
N
404
S
C
N
405
N
C
N
406
N
O
N
407
N
C
Y
408
N
C
Y
409
N
C
Y
410
N
C
Y
411
N
N
Y
412
N
C
Y
413
N
C
Y
414
N
C
Y
415
N
C
Y
416
N
C
N
417
N
O
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
H
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
N
N
431
S
C
N
432
N
C
N
433
N
O
N
434
N
C
Y
435
N
C
Y
436
N
C
Y
437
N
C
Y
438
N
C
Y
439
N
C
Y
440
N
C
N
441
N
O
N
442
N
O
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
N
N
455
S
C
N
456
N
C
N
457
N
O
N
458
N
C
N
459
N
C
N
460
N
C
N
461
N
O
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
H
N
466
N
H
N
467
N
H
N
468
N
H
N
469
N
H
N
470
N
H
N
471
N
H
N
472
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
doub
N
81
N
sing
N
82
N
sing
N
83
N
doub
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
doub
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
doub
N
116
N
doub
N
117
N
sing
Y
118
N
doub
Y
119
N
sing
Y
120
N
sing
N
121
N
sing
Y
122
N
doub
Y
123
N
sing
Y
124
N
sing
N
125
N
sing
N
126
N
sing
Y
127
N
doub
Y
128
N
sing
Y
129
N
doub
N
130
N
sing
Y
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
doub
N
135
N
sing
Y
136
N
doub
Y
137
N
sing
Y
138
N
sing
Y
139
N
doub
N
140
N
sing
Y
141
N
sing
Y
142
N
sing
Y
143
N
doub
N
144
N
sing
Y
145
N
doub
Y
146
N
sing
Y
147
N
sing
N
148
N
sing
Y
149
N
doub
N
150
N
sing
Y
151
N
sing
Y
152
N
doub
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
doub
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
doub
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
doub
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
doub
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
doub
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
Y
224
N
sing
Y
225
N
doub
Y
226
N
doub
N
227
N
sing
Y
228
N
sing
N
229
N
sing
Y
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
doub
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
doub
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
doub
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
doub
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
doub
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
Y
332
N
doub
Y
333
N
sing
Y
334
N
sing
N
335
N
sing
Y
336
N
doub
N
337
N
sing
Y
338
N
doub
N
339
N
sing
Y
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
doub
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
doub
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
doub
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
doub
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
Y
401
N
doub
Y
402
N
sing
Y
403
N
sing
N
404
N
sing
Y
405
N
doub
Y
406
N
sing
Y
407
N
sing
N
408
N
sing
Y
409
N
sing
Y
410
N
doub
N
411
N
sing
Y
412
N
doub
N
413
N
sing
Y
414
N
sing
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
doub
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
Y
429
N
doub
Y
430
N
sing
Y
431
N
sing
N
432
N
sing
Y
433
N
doub
N
434
N
sing
Y
435
N
doub
N
436
N
sing
Y
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
doub
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
UK
Bioorg.Med.Chem.
BMECEP
1200
0968-0896
13
3927
3954
10.1016/j.bmc.2005.04.006
15911309
Design, synthesis, and biological activity of non-basic compounds as factor Xa inhibitors: SAR study of S1 and aryl binding sites
2005
US
Proc.Natl.Acad.Sci.Usa
PNASA6
0040
0027-8424
95
6630
6635
10.1073/pnas.95.12.6630
9618463
Structural basis for chemical inhibition of human blood coagulation factor Xa
1998
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
271
29988
29992
10.1074/jbc.271.47.29988
8939944
X-ray structure of active site-inhibited clotting factor Xa. Implications for drug design and substrate recognition
1996
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
232
947
966
10.1006/jmbi.1993.1441
8355279
Structure of human des(1-45) factor Xa at 2.2 A resolution
1993
US
J.Med.Chem.
JMCMAR
0151
0022-2623
47
5167
5182
10.1021/jm049884d
Synthesis and Conformational Analysis of a Non-Amidine Factor Xa Inhibitor That Incorporates 5-Methyl-4,5,6,7-tetrahydrothiazolo[5,4-c]pyridine as S4 Binding Element
2004
10.2210/pdb1wu1/pdb
pdb_00001wu1
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
293.0
1
IMAGE PLATE
1999-04-13
RIGAKU RAXIS IIC
GRAPHITE
SINGLE WAVELENGTH
M
x-ray
1
1.542
1.0
1.542
1.542
ROTATING ANODE
RIGAKU RU200
26346.000
Coagulation factor X, heavy chain
3.4.21.6
RESIDUES 16-243
1
nat
polymer
10386.538
Coagulation factor X, light chain
3.4.21.6
RESIDUES 85-138
1
nat
polymer
40.078
CALCIUM ION
2
syn
non-polymer
539.049
5-CHLORO-2-({3-ISOBUTYL-4-[(5-PYRIDIN-4-YLPYRIMIDIN-2-YL)CARBONYL]PIPERAZIN-1-YL}SULFONYL)-1H-INDOLE
1
syn
non-polymer
18.015
water
76
nat
water
Stuart factor, Stuart-Prower factor
Stuart factor, Stuart-Prower factor
no
no
IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRF
TKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSS
SFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMK
IVGGQECKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRF
TKETYDFDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGRQSTRLKMLEVPYVDRNSCKLSS
SFIITQNMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMK
A
polypeptide(L)
no
yes
KDGDQCETSPCQNQGKCK(BHD)GLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADN
GKACIPTGPYPCGKQTLER
KDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKAC
IPTGPYPCGKQTLER
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
sample
9606
Homo sapiens
human
PROTEOLYTIC CLEAVAGE PRODUCT
Homo
sample
9606
Homo sapiens
1
2.20
44.21
VAPOR DIFFUSION, HANGING DROP
5.00
PEG6000, NaAcetate, pH 5.00, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Non-polymer description
Data collection
Database references
Derived calculations
Refinement description
1
0
2005-11-29
1
1
2008-04-01
1
2
2011-07-13
1
3
2012-06-20
1
4
2023-10-25
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
The same protein complexed with structurally related inhibitor
PDBJ
Y
PDBJ
2004-11-29
REL
CA
CALCIUM ION
D91
5-CHLORO-2-({3-ISOBUTYL-4-[(5-PYRIDIN-4-YLPYRIMIDIN-2-YL)CARBONYL]PIPERAZIN-1-YL}SULFONYL)-1H-INDOLE
HOH
water
1FAX
PDB
experimental model
CA
261
3
CA
CA
261
A
CA
262
3
CA
CA
262
A
D91
700
4
D91
D91
700
A
HOH
300
5
HOH
HOH
300
A
HOH
301
5
HOH
HOH
301
A
HOH
302
5
HOH
HOH
302
A
HOH
303
5
HOH
HOH
303
A
HOH
305
5
HOH
HOH
305
A
HOH
306
5
HOH
HOH
306
A
HOH
307
5
HOH
HOH
307
A
HOH
308
5
HOH
HOH
308
A
HOH
310
5
HOH
HOH
310
A
HOH
311
5
HOH
HOH
311
A
HOH
312
5
HOH
HOH
312
A
HOH
315
5
HOH
HOH
315
A
HOH
316
5
HOH
HOH
316
A
HOH
317
5
HOH
HOH
317
A
HOH
318
5
HOH
HOH
318
A
HOH
321
5
HOH
HOH
321
A
HOH
322
5
HOH
HOH
322
A
HOH
323
5
HOH
HOH
323
A
HOH
324
5
HOH
HOH
324
A
HOH
326
5
HOH
HOH
326
A
HOH
327
5
HOH
HOH
327
A
HOH
328
5
HOH
HOH
328
A
HOH
329
5
HOH
HOH
329
A
HOH
331
5
HOH
HOH
331
A
HOH
332
5
HOH
HOH
332
A
HOH
333
5
HOH
HOH
333
A
HOH
334
5
HOH
HOH
334
A
HOH
335
5
HOH
HOH
335
A
HOH
336
5
HOH
HOH
336
A
HOH
337
5
HOH
HOH
337
A
HOH
338
5
HOH
HOH
338
A
HOH
340
5
HOH
HOH
340
A
HOH
341
5
HOH
HOH
341
A
HOH
342
5
HOH
HOH
342
A
HOH
343
5
HOH
HOH
343
A
HOH
344
5
HOH
HOH
344
A
HOH
345
5
HOH
HOH
345
A
HOH
346
5
HOH
HOH
346
A
HOH
347
5
HOH
HOH
347
A
HOH
348
5
HOH
HOH
348
A
HOH
349
5
HOH
HOH
349
A
HOH
350
5
HOH
HOH
350
A
HOH
353
5
HOH
HOH
353
A
HOH
354
5
HOH
HOH
354
A
HOH
355
5
HOH
HOH
355
A
HOH
356
5
HOH
HOH
356
A
HOH
358
5
HOH
HOH
358
A
HOH
359
5
HOH
HOH
359
A
HOH
360
5
HOH
HOH
360
A
HOH
361
5
HOH
HOH
361
A
HOH
363
5
HOH
HOH
363
A
HOH
364
5
HOH
HOH
364
A
HOH
366
5
HOH
HOH
366
A
HOH
367
5
HOH
HOH
367
A
HOH
502
5
HOH
HOH
502
A
HOH
503
5
HOH
HOH
503
A
HOH
504
5
HOH
HOH
504
A
HOH
505
5
HOH
HOH
505
A
HOH
506
5
HOH
HOH
506
A
HOH
304
5
HOH
HOH
304
B
HOH
309
5
HOH
HOH
309
B
HOH
313
5
HOH
HOH
313
B
HOH
314
5
HOH
HOH
314
B
HOH
319
5
HOH
HOH
319
B
HOH
320
5
HOH
HOH
320
B
HOH
325
5
HOH
HOH
325
B
HOH
330
5
HOH
HOH
330
B
HOH
339
5
HOH
HOH
339
B
HOH
351
5
HOH
HOH
351
B
HOH
352
5
HOH
HOH
352
B
HOH
357
5
HOH
HOH
357
B
HOH
362
5
HOH
HOH
362
B
HOH
365
5
HOH
HOH
365
B
HOH
500
5
HOH
HOH
500
B
HOH
501
5
HOH
HOH
501
B
HOH
507
5
HOH
HOH
507
B
ILE
16
n
1
ILE
16
A
VAL
17
n
2
VAL
17
A
GLY
18
n
3
GLY
18
A
GLY
19
n
4
GLY
19
A
GLN
20
n
5
GLN
20
A
GLU
21
n
6
GLU
21
A
CYS
22
n
7
CYS
22
A
LYS
23
n
8
LYS
23
A
ASP
24
n
9
ASP
24
A
GLY
25
n
10
GLY
25
A
GLU
26
n
11
GLU
26
A
CYS
27
n
12
CYS
27
A
PRO
28
n
13
PRO
28
A
TRP
29
n
14
TRP
29
A
GLN
30
n
15
GLN
30
A
ALA
31
n
16
ALA
31
A
LEU
32
n
17
LEU
32
A
LEU
33
n
18
LEU
33
A
ILE
34
n
19
ILE
34
A
ASN
35
n
20
ASN
35
A
GLU
36
n
21
GLU
36
A
GLU
37
n
22
GLU
37
A
ASN
38
n
23
ASN
38
A
GLU
39
n
24
GLU
39
A
GLY
40
n
25
GLY
40
A
PHE
41
n
26
PHE
41
A
CYS
42
n
27
CYS
42
A
GLY
43
n
28
GLY
43
A
GLY
44
n
29
GLY
44
A
THR
45
n
30
THR
45
A
ILE
46
n
31
ILE
46
A
LEU
47
n
32
LEU
47
A
SER
48
n
33
SER
48
A
GLU
49
n
34
GLU
49
A
PHE
50
n
35
PHE
50
A
TYR
51
n
36
TYR
51
A
ILE
52
n
37
ILE
52
A
LEU
53
n
38
LEU
53
A
THR
54
n
39
THR
54
A
ALA
55
n
40
ALA
55
A
ALA
56
n
41
ALA
56
A
HIS
57
n
42
HIS
57
A
CYS
58
n
43
CYS
58
A
LEU
59
n
44
LEU
59
A
TYR
60
n
45
TYR
60
A
GLN
61
n
46
GLN
61
A
ALA
61
n
47
A
ALA
61
A
LYS
62
n
48
LYS
62
A
ARG
63
n
49
ARG
63
A
PHE
64
n
50
PHE
64
A
LYS
65
n
51
LYS
65
A
VAL
66
n
52
VAL
66
A
ARG
67
n
53
ARG
67
A
VAL
68
n
54
VAL
68
A
GLY
69
n
55
GLY
69
A
ASP
70
n
56
ASP
70
A
ARG
71
n
57
ARG
71
A
ASN
72
n
58
ASN
72
A
THR
73
n
59
THR
73
A
GLU
74
n
60
GLU
74
A
GLN
75
n
61
GLN
75
A
GLU
76
n
62
GLU
76
A
GLU
77
n
63
GLU
77
A
GLY
78
n
64
GLY
78
A
GLY
79
n
65
GLY
79
A
GLU
80
n
66
GLU
80
A
ALA
81
n
67
ALA
81
A
VAL
82
n
68
VAL
82
A
HIS
83
n
69
HIS
83
A
GLU
84
n
70
GLU
84
A
VAL
85
n
71
VAL
85
A
GLU
86
n
72
GLU
86
A
VAL
87
n
73
VAL
87
A
VAL
88
n
74
VAL
88
A
ILE
89
n
75
ILE
89
A
LYS
90
n
76
LYS
90
A
HIS
91
n
77
HIS
91
A
ASN
92
n
78
ASN
92
A
ARG
93
n
79
ARG
93
A
PHE
94
n
80
PHE
94
A
THR
95
n
81
THR
95
A
LYS
96
n
82
LYS
96
A
GLU
97
n
83
GLU
97
A
THR
98
n
84
THR
98
A
TYR
99
n
85
TYR
99
A
ASP
100
n
86
ASP
100
A
PHE
101
n
87
PHE
101
A
ASP
102
n
88
ASP
102
A
ILE
103
n
89
ILE
103
A
ALA
104
n
90
ALA
104
A
VAL
105
n
91
VAL
105
A
LEU
106
n
92
LEU
106
A
ARG
107
n
93
ARG
107
A
LEU
108
n
94
LEU
108
A
LYS
109
n
95
LYS
109
A
THR
110
n
96
THR
110
A
PRO
111
n
97
PRO
111
A
ILE
112
n
98
ILE
112
A
THR
113
n
99
THR
113
A
PHE
114
n
100
PHE
114
A
ARG
115
n
101
ARG
115
A
MET
116
n
102
MET
116
A
ASN
117
n
103
ASN
117
A
VAL
118
n
104
VAL
118
A
ALA
119
n
105
ALA
119
A
PRO
120
n
106
PRO
120
A
ALA
121
n
107
ALA
121
A
CYS
122
n
108
CYS
122
A
LEU
123
n
109
LEU
123
A
PRO
124
n
110
PRO
124
A
GLU
124
n
111
A
GLU
124
A
ARG
125
n
112
ARG
125
A
ASP
126
n
113
ASP
126
A
TRP
127
n
114
TRP
127
A
ALA
128
n
115
ALA
128
A
GLU
129
n
116
GLU
129
A
SER
130
n
117
SER
130
A
THR
131
n
118
THR
131
A
LEU
131
n
119
A
LEU
131
A
MET
131
n
120
B
MET
131
A
THR
132
n
121
THR
132
A
GLN
133
n
122
GLN
133
A
LYS
134
n
123
LYS
134
A
THR
135
n
124
THR
135
A
GLY
136
n
125
GLY
136
A
ILE
137
n
126
ILE
137
A
VAL
138
n
127
VAL
138
A
SER
139
n
128
SER
139
A
GLY
140
n
129
GLY
140
A
PHE
141
n
130
PHE
141
A
GLY
142
n
131
GLY
142
A
ARG
143
n
132
ARG
143
A
THR
144
n
133
THR
144
A
HIS
145
n
134
HIS
145
A
GLU
147
n
135
GLU
147
A
LYS
148
n
136
LYS
148
A
GLY
149
n
137
GLY
149
A
ARG
150
n
138
ARG
150
A
GLN
151
n
139
GLN
151
A
SER
152
n
140
SER
152
A
THR
153
n
141
THR
153
A
ARG
154
n
142
ARG
154
A
LEU
155
n
143
LEU
155
A
LYS
156
n
144
LYS
156
A
MET
157
n
145
MET
157
A
LEU
158
n
146
LEU
158
A
GLU
159
n
147
GLU
159
A
VAL
160
n
148
VAL
160
A
PRO
161
n
149
PRO
161
A
TYR
162
n
150
TYR
162
A
VAL
163
n
151
VAL
163
A
ASP
164
n
152
ASP
164
A
ARG
165
n
153
ARG
165
A
ASN
166
n
154
ASN
166
A
SER
167
n
155
SER
167
A
CYS
168
n
156
CYS
168
A
LYS
169
n
157
LYS
169
A
LEU
170
n
158
LEU
170
A
SER
171
n
159
SER
171
A
SER
172
n
160
SER
172
A
SER
173
n
161
SER
173
A
PHE
174
n
162
PHE
174
A
ILE
175
n
163
ILE
175
A
ILE
176
n
164
ILE
176
A
THR
177
n
165
THR
177
A
GLN
178
n
166
GLN
178
A
ASN
179
n
167
ASN
179
A
MET
180
n
168
MET
180
A
PHE
181
n
169
PHE
181
A
CYS
182
n
170
CYS
182
A
ALA
183
n
171
ALA
183
A
GLY
184
n
172
GLY
184
A
TYR
185
n
173
TYR
185
A
ASP
185
n
174
A
ASP
185
A
THR
185
n
175
B
THR
185
A
LYS
186
n
176
LYS
186
A
GLN
187
n
177
GLN
187
A
GLU
188
n
178
GLU
188
A
ASP
189
n
179
ASP
189
A
ALA
190
n
180
ALA
190
A
CYS
191
n
181
CYS
191
A
GLN
192
n
182
GLN
192
A
GLY
193
n
183
GLY
193
A
ASP
194
n
184
ASP
194
A
SER
195
n
185
SER
195
A
GLY
196
n
186
GLY
196
A
GLY
197
n
187
GLY
197
A
PRO
198
n
188
PRO
198
A
HIS
199
n
189
HIS
199
A
VAL
200
n
190
VAL
200
A
THR
201
n
191
THR
201
A
ARG
202
n
192
ARG
202
A
PHE
203
n
193
PHE
203
A
LYS
204
n
194
LYS
204
A
ASP
205
n
195
ASP
205
A
THR
206
n
196
THR
206
A
TYR
207
n
197
TYR
207
A
PHE
208
n
198
PHE
208
A
VAL
209
n
199
VAL
209
A
THR
210
n
200
THR
210
A
GLY
211
n
201
GLY
211
A
ILE
212
n
202
ILE
212
A
VAL
213
n
203
VAL
213
A
SER
214
n
204
SER
214
A
TRP
215
n
205
TRP
215
A
GLY
216
n
206
GLY
216
A
GLU
217
n
207
GLU
217
A
GLY
218
n
208
GLY
218
A
CYS
220
n
209
CYS
220
A
ALA
221
n
210
ALA
221
A
ARG
222
n
211
ARG
222
A
LYS
223
n
212
LYS
223
A
GLY
223
n
213
A
GLY
223
A
LYS
224
n
214
LYS
224
A
TYR
225
n
215
TYR
225
A
GLY
226
n
216
GLY
226
A
ILE
227
n
217
ILE
227
A
TYR
228
n
218
TYR
228
A
THR
229
n
219
THR
229
A
LYS
230
n
220
LYS
230
A
VAL
231
n
221
VAL
231
A
THR
232
n
222
THR
232
A
ALA
233
n
223
ALA
233
A
PHE
234
n
224
PHE
234
A
LEU
235
n
225
LEU
235
A
LYS
236
n
226
LYS
236
A
TRP
237
n
227
TRP
237
A
ILE
238
n
228
ILE
238
A
ASP
239
n
229
ASP
239
A
ARG
240
n
230
ARG
240
A
SER
241
n
231
SER
241
A
MET
242
n
232
MET
242
A
LYS
243
n
233
LYS
243
A
n
1
45
B
n
2
46
B
n
3
47
B
n
4
48
B
n
5
49
B
n
6
50
B
n
7
51
B
n
8
52
B
n
9
53
B
n
10
54
B
n
11
55
B
n
12
56
B
n
13
57
B
n
14
58
B
n
15
59
B
n
16
60
B
n
17
61
B
n
18
62
B
n
19
63
B
n
20
64
B
n
21
65
B
n
22
66
B
n
23
67
B
n
24
68
B
n
25
69
B
n
26
70
B
n
27
71
B
n
28
72
B
n
29
73
B
n
30
74
B
n
31
75
B
n
32
76
B
n
33
77
B
n
34
78
B
n
35
79
B
n
36
80
B
n
37
81
B
n
38
82
B
n
39
83
B
n
40
84
B
THR
85
n
41
THR
85
B
ARG
86
n
42
ARG
86
B
LYS
87
n
43
LYS
87
B
LEU
88
n
44
LEU
88
B
CYS
89
n
45
CYS
89
B
SER
90
n
46
SER
90
B
LEU
91
n
47
LEU
91
B
ASP
92
n
48
ASP
92
B
ASN
93
n
49
ASN
93
B
GLY
94
n
50
GLY
94
B
ASP
95
n
51
ASP
95
B
CYS
96
n
52
CYS
96
B
ASP
97
n
53
ASP
97
B
GLN
98
n
54
GLN
98
B
PHE
99
n
55
PHE
99
B
CYS
100
n
56
CYS
100
B
HIS
101
n
57
HIS
101
B
GLU
102
n
58
GLU
102
B
GLU
103
n
59
GLU
103
B
GLN
104
n
60
GLN
104
B
ASN
105
n
61
ASN
105
B
SER
106
n
62
SER
106
B
VAL
107
n
63
VAL
107
B
VAL
108
n
64
VAL
108
B
CYS
109
n
65
CYS
109
B
SER
110
n
66
SER
110
B
CYS
111
n
67
CYS
111
B
ALA
112
n
68
ALA
112
B
ARG
113
n
69
ARG
113
B
GLY
114
n
70
GLY
114
B
TYR
115
n
71
TYR
115
B
THR
116
n
72
THR
116
B
LEU
117
n
73
LEU
117
B
ALA
118
n
74
ALA
118
B
ASP
119
n
75
ASP
119
B
ASN
120
n
76
ASN
120
B
GLY
121
n
77
GLY
121
B
LYS
122
n
78
LYS
122
B
ALA
123
n
79
ALA
123
B
CYS
124
n
80
CYS
124
B
ILE
125
n
81
ILE
125
B
PRO
126
n
82
PRO
126
B
THR
127
n
83
THR
127
B
GLY
128
n
84
GLY
128
B
PRO
129
n
85
PRO
129
B
TYR
130
n
86
TYR
130
B
PRO
131
n
87
PRO
131
B
CYS
132
n
88
CYS
132
B
GLY
133
n
89
GLY
133
B
LYS
134
n
90
LYS
134
B
GLN
135
n
91
GLN
135
B
THR
136
n
92
THR
136
B
LEU
137
n
93
LEU
137
B
GLU
138
n
94
GLU
138
B
n
95
139
B
author_defined_assembly
2
dimeric
A
ASP
70
A
OD1
ASP
56
1_555
A
CA
261
C
CA
CA
1_555
A
ASN
72
A
O
ASN
58
1_555
85.4
A
ASP
70
A
OD1
ASP
56
1_555
A
CA
261
C
CA
CA
1_555
A
GLN
75
A
O
GLN
61
1_555
141.2
A
ASN
72
A
O
ASN
58
1_555
A
CA
261
C
CA
CA
1_555
A
GLN
75
A
O
GLN
61
1_555
76.1
A
ASP
70
A
OD1
ASP
56
1_555
A
CA
261
C
CA
CA
1_555
A
GLU
77
A
OE2
GLU
63
1_555
98.1
A
ASN
72
A
O
ASN
58
1_555
A
CA
261
C
CA
CA
1_555
A
GLU
77
A
OE2
GLU
63
1_555
79.1
A
GLN
75
A
O
GLN
61
1_555
A
CA
261
C
CA
CA
1_555
A
GLU
77
A
OE2
GLU
63
1_555
111.1
A
ASP
70
A
OD1
ASP
56
1_555
A
CA
261
C
CA
CA
1_555
A
GLU
80
A
OE2
GLU
66
1_555
78.1
A
ASN
72
A
O
ASN
58
1_555
A
CA
261
C
CA
CA
1_555
A
GLU
80
A
OE2
GLU
66
1_555
157.6
A
GLN
75
A
O
GLN
61
1_555
A
CA
261
C
CA
CA
1_555
A
GLU
80
A
OE2
GLU
66
1_555
107.9
A
GLU
77
A
OE2
GLU
63
1_555
A
CA
261
C
CA
CA
1_555
A
GLU
80
A
OE2
GLU
66
1_555
117.9
A
ASP
70
A
OD1
ASP
56
1_555
A
CA
261
C
CA
CA
1_555
A
HOH
355
F
O
HOH
1_555
79.6
A
ASN
72
A
O
ASN
58
1_555
A
CA
261
C
CA
CA
1_555
A
HOH
355
F
O
HOH
1_555
89.2
A
GLN
75
A
O
GLN
61
1_555
A
CA
261
C
CA
CA
1_555
A
HOH
355
F
O
HOH
1_555
66.6
A
GLU
77
A
OE2
GLU
63
1_555
A
CA
261
C
CA
CA
1_555
A
HOH
355
F
O
HOH
1_555
168.2
A
GLU
80
A
OE2
GLU
66
1_555
A
CA
261
C
CA
CA
1_555
A
HOH
355
F
O
HOH
1_555
73.1
A
TYR
185
A
O
TYR
173
1_555
A
CA
262
D
CA
CA
1_555
A
A
ASP
185
A
O
ASP
174
1_555
77.7
A
TYR
185
A
O
TYR
173
1_555
A
CA
262
D
CA
CA
1_555
A
ARG
222
A
O
ARG
211
1_555
154.0
A
A
ASP
185
A
O
ASP
174
1_555
A
CA
262
D
CA
CA
1_555
A
ARG
222
A
O
ARG
211
1_555
78.6
A
TYR
185
A
O
TYR
173
1_555
A
CA
262
D
CA
CA
1_555
A
LYS
224
A
O
LYS
214
1_555
88.7
A
A
ASP
185
A
O
ASP
174
1_555
A
CA
262
D
CA
CA
1_555
A
LYS
224
A
O
LYS
214
1_555
109.5
A
ARG
222
A
O
ARG
211
1_555
A
CA
262
D
CA
CA
1_555
A
LYS
224
A
O
LYS
214
1_555
89.4
A
TYR
185
A
O
TYR
173
1_555
A
CA
262
D
CA
CA
1_555
A
HOH
337
F
O
HOH
1_555
94.4
A
A
ASP
185
A
O
ASP
174
1_555
A
CA
262
D
CA
CA
1_555
A
HOH
337
F
O
HOH
1_555
171.5
A
ARG
222
A
O
ARG
211
1_555
A
CA
262
D
CA
CA
1_555
A
HOH
337
F
O
HOH
1_555
108.5
A
LYS
224
A
O
LYS
214
1_555
A
CA
262
D
CA
CA
1_555
A
HOH
337
F
O
HOH
1_555
66.6
A
TYR
185
A
O
TYR
173
1_555
A
CA
262
D
CA
CA
1_555
A
HOH
367
F
O
HOH
1_555
111.5
A
A
ASP
185
A
O
ASP
174
1_555
A
CA
262
D
CA
CA
1_555
A
HOH
367
F
O
HOH
1_555
86.4
A
ARG
222
A
O
ARG
211
1_555
A
CA
262
D
CA
CA
1_555
A
HOH
367
F
O
HOH
1_555
77.2
A
LYS
224
A
O
LYS
214
1_555
A
CA
262
D
CA
CA
1_555
A
HOH
367
F
O
HOH
1_555
157.0
A
HOH
337
F
O
HOH
1_555
A
CA
262
D
CA
CA
1_555
A
HOH
367
F
O
HOH
1_555
99.7
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
GLN
20
A
N
GLN
5
A
O
MET
157
A
O
MET
145
A
O
LYS
156
A
O
LYS
144
A
N
GLY
140
A
N
GLY
129
A
N
ILE
137
A
N
ILE
126
A
O
VAL
200
A
O
VAL
190
A
N
PHE
203
A
N
PHE
193
A
O
THR
206
A
O
THR
196
A
N
TRP
215
A
N
TRP
205
A
O
ILE
227
A
O
ILE
217
A
O
GLY
226
A
O
GLY
216
A
N
ALA
183
A
N
ALA
171
A
N
ALA
31
A
N
ALA
16
A
O
GLY
44
A
O
GLY
29
A
N
THR
45
A
N
THR
30
A
O
LEU
53
A
O
LEU
38
A
N
THR
54
A
N
THR
39
A
O
ALA
104
A
O
ALA
90
A
O
ARG
107
A
O
ARG
93
A
N
GLU
86
A
N
GLU
72
A
O
HIS
83
A
O
HIS
69
A
N
VAL
66
A
N
VAL
52
A
O
ARG
67
A
O
ARG
53
A
N
LEU
32
A
N
LEU
17
B
N
HIS
101
B
N
HIS
57
B
O
VAL
108
B
O
VAL
64
B
N
THR
116
B
N
THR
72
B
O
ILE
125
B
O
ILE
81
1
A
OE1
GLN
20
A
OE1
GLN
5
1
Y
1
A
NE2
GLN
20
A
NE2
GLN
5
1
Y
1
A
OE1
GLU
36
A
OE1
GLU
21
1
Y
1
A
OE2
GLU
36
A
OE2
GLU
21
1
Y
1
A
CG
GLU
37
A
CG
GLU
22
1
Y
1
A
CD
GLU
37
A
CD
GLU
22
1
Y
1
A
OE1
GLU
37
A
OE1
GLU
22
1
Y
1
A
OE2
GLU
37
A
OE2
GLU
22
1
Y
1
A
OD1
ASN
38
A
OD1
ASN
23
1
Y
1
A
ND2
ASN
38
A
ND2
ASN
23
1
Y
1
A
CG
GLU
39
A
CG
GLU
24
1
Y
1
A
CD
GLU
39
A
CD
GLU
24
1
Y
1
A
OE1
GLU
39
A
OE1
GLU
24
1
Y
1
A
OE2
GLU
39
A
OE2
GLU
24
1
Y
1
A
CG
LYS
62
A
CG
LYS
48
1
Y
1
A
CD
LYS
62
A
CD
LYS
48
1
Y
1
A
CE
LYS
62
A
CE
LYS
48
1
Y
1
A
NZ
LYS
62
A
NZ
LYS
48
1
Y
1
A
CG
ARG
63
A
CG
ARG
49
1
Y
1
A
CD
ARG
63
A
CD
ARG
49
1
Y
1
A
NE
ARG
63
A
NE
ARG
49
1
Y
1
A
CZ
ARG
63
A
CZ
ARG
49
1
Y
1
A
NH1
ARG
63
A
NH1
ARG
49
1
Y
1
A
NH2
ARG
63
A
NH2
ARG
49
1
Y
1
A
OE1
GLN
75
A
OE1
GLN
61
1
Y
1
A
NE2
GLN
75
A
NE2
GLN
61
1
Y
1
A
CD
GLU
76
A
CD
GLU
62
1
Y
1
A
OE1
GLU
76
A
OE1
GLU
62
1
Y
1
A
OE2
GLU
76
A
OE2
GLU
62
1
Y
1
A
OD1
ASN
92
A
OD1
ASN
78
1
Y
1
A
ND2
ASN
92
A
ND2
ASN
78
1
Y
1
A
NE
ARG
93
A
NE
ARG
79
1
Y
1
A
CZ
ARG
93
A
CZ
ARG
79
1
Y
1
A
NH1
ARG
93
A
NH1
ARG
79
1
Y
1
A
NH2
ARG
93
A
NH2
ARG
79
1
Y
1
A
CG
LYS
96
A
CG
LYS
82
1
Y
1
A
CD
LYS
96
A
CD
LYS
82
1
Y
1
A
CE
LYS
96
A
CE
LYS
82
1
Y
1
A
NZ
LYS
96
A
NZ
LYS
82
1
Y
1
A
CG
GLU
97
A
CG
GLU
83
1
Y
1
A
CD
GLU
97
A
CD
GLU
83
1
Y
1
A
OE1
GLU
97
A
OE1
GLU
83
1
Y
1
A
OE2
GLU
97
A
OE2
GLU
83
1
Y
1
A
OG
SER
130
A
OG
SER
117
1
Y
1
A
CD
LYS
134
A
CD
LYS
123
1
Y
1
A
CE
LYS
134
A
CE
LYS
123
1
Y
1
A
NZ
LYS
134
A
NZ
LYS
123
1
Y
1
A
CD
LYS
148
A
CD
LYS
136
1
Y
1
A
CE
LYS
148
A
CE
LYS
136
1
Y
1
A
NZ
LYS
148
A
NZ
LYS
136
1
Y
1
A
CG
ARG
150
A
CG
ARG
138
1
Y
1
A
CD
ARG
150
A
CD
ARG
138
1
Y
1
A
NE
ARG
150
A
NE
ARG
138
1
Y
1
A
CZ
ARG
150
A
CZ
ARG
138
1
Y
1
A
NH1
ARG
150
A
NH1
ARG
138
1
Y
1
A
NH2
ARG
150
A
NH2
ARG
138
1
Y
1
A
OE1
GLN
187
A
OE1
GLN
177
1
Y
1
A
NE2
GLN
187
A
NE2
GLN
177
1
Y
1
A
CZ
ARG
202
A
CZ
ARG
192
1
Y
1
A
NH1
ARG
202
A
NH1
ARG
192
1
Y
1
A
NH2
ARG
202
A
NH2
ARG
192
1
Y
1
A
CG
LYS
223
A
CG
LYS
212
1
Y
1
A
CD
LYS
223
A
CD
LYS
212
1
Y
1
A
CE
LYS
223
A
CE
LYS
212
1
Y
1
A
NZ
LYS
223
A
NZ
LYS
212
1
Y
1
A
CG
LYS
236
A
CG
LYS
226
1
Y
1
A
CD
LYS
236
A
CD
LYS
226
1
Y
1
A
CE
LYS
236
A
CE
LYS
226
1
Y
1
A
NZ
LYS
236
A
NZ
LYS
226
1
Y
1
B
CG
ARG
86
B
CG
ARG
42
1
Y
1
B
CD
ARG
86
B
CD
ARG
42
1
Y
1
B
NE
ARG
86
B
NE
ARG
42
1
Y
1
B
CZ
ARG
86
B
CZ
ARG
42
1
Y
1
B
NH1
ARG
86
B
NH1
ARG
42
1
Y
1
B
NH2
ARG
86
B
NH2
ARG
42
1
Y
1
B
CG
LYS
87
B
CG
LYS
43
1
Y
1
B
CD
LYS
87
B
CD
LYS
43
1
Y
1
B
CE
LYS
87
B
CE
LYS
43
1
Y
1
B
NZ
LYS
87
B
NZ
LYS
43
1
Y
1
B
CG
GLN
104
B
CG
GLN
60
1
Y
1
B
CD
GLN
104
B
CD
GLN
60
1
Y
1
B
OE1
GLN
104
B
OE1
GLN
60
1
Y
1
B
NE2
GLN
104
B
NE2
GLN
60
1
Y
1
B
CG
ARG
113
B
CG
ARG
69
1
Y
1
B
CD
ARG
113
B
CD
ARG
69
1
Y
1
B
NE
ARG
113
B
NE
ARG
69
1
Y
1
B
CZ
ARG
113
B
CZ
ARG
69
1
Y
1
B
NH1
ARG
113
B
NH1
ARG
69
1
Y
1
B
NH2
ARG
113
B
NH2
ARG
69
1
Y
1
B
CG
GLU
138
B
CG
GLU
94
1
Y
1
B
CD
GLU
138
B
CD
GLU
94
1
Y
1
B
OE1
GLU
138
B
OE1
GLU
94
1
Y
1
B
OE2
GLU
138
B
OE2
GLU
94
1
Y
1
A
C7
D91
700
E
C7
D91
1
1
N
1
A
C10
D91
700
E
C10
D91
1
1
N
1
A
C11
D91
700
E
C11
D91
1
1
N
1
A
C12
D91
700
E
C12
D91
1
1
N
1
B
LYS
45
B
LYS
1
1
Y
1
B
ASP
46
B
ASP
2
1
Y
1
B
GLY
47
B
GLY
3
1
Y
1
B
ASP
48
B
ASP
4
1
Y
1
B
GLN
49
B
GLN
5
1
Y
1
B
CYS
50
B
CYS
6
1
Y
1
B
GLU
51
B
GLU
7
1
Y
1
B
THR
52
B
THR
8
1
Y
1
B
SER
53
B
SER
9
1
Y
1
B
PRO
54
B
PRO
10
1
Y
1
B
CYS
55
B
CYS
11
1
Y
1
B
GLN
56
B
GLN
12
1
Y
1
B
ASN
57
B
ASN
13
1
Y
1
B
GLN
58
B
GLN
14
1
Y
1
B
GLY
59
B
GLY
15
1
Y
1
B
LYS
60
B
LYS
16
1
Y
1
B
CYS
61
B
CYS
17
1
Y
1
B
LYS
62
B
LYS
18
1
Y
1
B
BHD
63
B
BHD
19
1
Y
1
B
GLY
64
B
GLY
20
1
Y
1
B
LEU
65
B
LEU
21
1
Y
1
B
GLY
66
B
GLY
22
1
Y
1
B
GLU
67
B
GLU
23
1
Y
1
B
TYR
68
B
TYR
24
1
Y
1
B
THR
69
B
THR
25
1
Y
1
B
CYS
70
B
CYS
26
1
Y
1
B
THR
71
B
THR
27
1
Y
1
B
CYS
72
B
CYS
28
1
Y
1
B
LEU
73
B
LEU
29
1
Y
1
B
GLU
74
B
GLU
30
1
Y
1
B
GLY
75
B
GLY
31
1
Y
1
B
PHE
76
B
PHE
32
1
Y
1
B
GLU
77
B
GLU
33
1
Y
1
B
GLY
78
B
GLY
34
1
Y
1
B
LYS
79
B
LYS
35
1
Y
1
B
ASN
80
B
ASN
36
1
Y
1
B
CYS
81
B
CYS
37
1
Y
1
B
GLU
82
B
GLU
38
1
Y
1
B
LEU
83
B
LEU
39
1
Y
1
B
PHE
84
B
PHE
40
1
Y
1
B
ARG
139
B
ARG
95
1
Y
1
3.55
0.50
120.30
123.85
A
A
A
NE
CZ
NH2
ARG
ARG
ARG
154
154
154
N
1
B
B
CB
SG
CYS
CYS
109
109
-0.129
0.016
1.812
1.683
N
1
A
ASP
24
-39.09
117.63
1
A
GLU
37
-69.67
9.85
1
A
ARG
115
179.75
-177.57
1
A
LYS
204
51.56
-118.25
1
A
SER
214
-110.60
-70.68
1
B
LEU
88
36.82
-124.09
1
B
ASN
93
56.35
16.38
1
B
GLN
98
-138.41
-110.97
1
B
GLN
104
64.80
-131.29
1
B
LEU
137
-170.49
-35.06
45.300
0.31
0.00
0.00
-1.70
0.00
1.39
0.942
0.912
0.23535
0.18871
0.1913
2.30
25.00
697
12933
5.1
100.00
6.604
0.166
RANDOM
1
THROUGHOUT
RIGID BODY REFINEMENT
0.338
0.231
1FAX
MAXIMUM LIKELIHOOD
BABINET MODEL PARAMETERS FOR MASK CACLULATION
2.30
25.00
76
2266
35
0
2155
0.022
0.022
2245
2.116
1.962
3050
7.279
5.000
285
36.164
24.111
90
18.214
15.000
351
30.158
15.000
10
0.130
0.200
333
0.008
0.020
1702
0.250
0.200
1019
0.328
0.200
1573
0.183
0.200
156
0.215
0.200
6
0.211
0.200
21
0.149
0.200
12
1.930
1.500
1439
3.175
2.500
2264
2.648
2.000
918
3.961
3.000
786
0.307
0.208
2.380
65
1203
15
100.00
2.300
39.51
1WU1
13656
0.000
0.064
0.338
1
11.700
2.900
90.6
0.338
2.30
2.38
2.890
0.338
1
2.89
84.3
data scaling
d*TREK
data reduction
d*TREK
refinement
REFMAC
5.2.0005
Factor Xa in complex with the inhibitor 4-[(5-chloroindol-2-yl)sulfonyl]-2-(2-methylpropyl)-1-[[5-(pyridin-4-yl) pyrimidin-2-yl]carbonyl]piperazine
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
5
N
N
5
N
N
A
ALA
55
A
ALA
40
HELX_P
A
GLN
61
A
GLN
46
5
1
7
A
GLU
124
A
GLU
111
HELX_P
A
LEU
131
A
LEU
119
1
2
9
A
A
A
ASP
164
A
ASP
152
HELX_P
A
SER
172
A
SER
160
1
3
9
A
PHE
234
A
PHE
224
HELX_P
A
MET
242
A
MET
232
1
4
9
B
LYS
87
B
LYS
43
HELX_P
B
CYS
96
B
CYS
52
5
5
10
disulf
1.993
A
CYS
22
A
SG
CYS
7
1_555
A
CYS
27
A
SG
CYS
12
1_555
disulf
2.015
A
CYS
42
A
SG
CYS
27
1_555
A
CYS
58
A
SG
CYS
43
1_555
disulf
1.984
A
CYS
122
A
SG
CYS
108
1_555
B
CYS
132
B
SG
CYS
88
1_555
disulf
1.983
A
CYS
168
A
SG
CYS
156
1_555
A
CYS
182
A
SG
CYS
170
1_555
disulf
2.012
A
CYS
191
A
SG
CYS
181
1_555
A
CYS
220
A
SG
CYS
209
1_555
disulf
2.034
B
CYS
89
B
SG
CYS
45
1_555
B
CYS
100
B
SG
CYS
56
1_555
disulf
1.970
B
CYS
96
B
SG
CYS
52
1_555
B
CYS
109
B
SG
CYS
65
1_555
disulf
1.999
B
CYS
111
B
SG
CYS
67
1_555
B
CYS
124
B
SG
CYS
80
1_555
metalc
2.228
A
ASP
70
A
OD1
ASP
56
1_555
A
CA
261
C
CA
CA
1_555
metalc
2.532
A
ASN
72
A
O
ASN
58
1_555
A
CA
261
C
CA
CA
1_555
metalc
2.569
A
GLN
75
A
O
GLN
61
1_555
A
CA
261
C
CA
CA
1_555
metalc
2.051
A
GLU
77
A
OE2
GLU
63
1_555
A
CA
261
C
CA
CA
1_555
metalc
2.310
A
GLU
80
A
OE2
GLU
66
1_555
A
CA
261
C
CA
CA
1_555
metalc
2.179
A
TYR
185
A
O
TYR
173
1_555
A
CA
262
D
CA
CA
1_555
metalc
3.006
A
A
ASP
185
A
O
ASP
174
1_555
A
CA
262
D
CA
CA
1_555
metalc
2.474
A
ARG
222
A
O
ARG
211
1_555
A
CA
262
D
CA
CA
1_555
metalc
2.281
A
LYS
224
A
O
LYS
214
1_555
A
CA
262
D
CA
CA
1_555
metalc
2.300
A
CA
261
C
CA
CA
1_555
A
HOH
355
F
O
HOH
1_555
metalc
2.884
A
CA
262
D
CA
CA
1_555
A
HOH
337
F
O
HOH
1_555
metalc
2.450
A
CA
262
D
CA
CA
1_555
A
HOH
367
F
O
HOH
1_555
HYDROLASE
glycoprotein, hydrolase, serine protease, plasma, blood coagulation factor, protein inhibitor complex, calcium-binding
FA10_HUMAN
UNP
1
235
P00742
FA10_HUMAN
UNP
2
85
P00742
235
467
1WU1
16
243
P00742
A
1
1
233
85
179
1WU1
45
139
P00742
B
2
1
95
7
7
2
2
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLN
20
A
GLN
5
A
GLU
21
A
GLU
6
A
LYS
156
A
LYS
144
A
PRO
161
A
PRO
149
A
THR
135
A
THR
124
A
GLY
140
A
GLY
129
A
PRO
198
A
PRO
188
A
PHE
203
A
PHE
193
A
THR
206
A
THR
196
A
GLY
216
A
GLY
206
A
GLY
226
A
GLY
216
A
LYS
230
A
LYS
220
A
MET
180
A
MET
168
A
ALA
183
A
ALA
171
A
GLN
30
A
GLN
15
A
ILE
34
A
ILE
19
A
GLY
40
A
GLY
25
A
ILE
46
A
ILE
31
A
TYR
51
A
TYR
36
A
THR
54
A
THR
39
A
ALA
104
A
ALA
90
A
LEU
108
A
LEU
94
A
ALA
81
A
ALA
67
A
LYS
90
A
LYS
76
A
LYS
65
A
LYS
51
A
VAL
68
A
VAL
54
A
GLN
30
A
GLN
15
A
ILE
34
A
ILE
19
B
PHE
99
B
PHE
55
B
GLU
103
B
GLU
59
B
SER
106
B
SER
62
B
SER
110
B
SER
66
B
TYR
115
B
TYR
71
B
LEU
117
B
LEU
73
B
CYS
124
B
CYS
80
B
PRO
126
B
PRO
82
BINDING SITE FOR RESIDUE CA A 261
A
CA
261
Software
7
BINDING SITE FOR RESIDUE CA A 262
A
CA
262
Software
6
BINDING SITE FOR RESIDUE D91 A 700
A
D91
700
Software
16
A
ASP
70
A
ASP
56
7
1_555
A
ASN
72
A
ASN
58
7
1_555
A
GLN
75
A
GLN
61
7
1_555
A
GLU
76
A
GLU
62
7
1_555
A
GLU
77
A
GLU
63
7
1_555
A
GLU
80
A
GLU
66
7
1_555
A
HOH
355
F
HOH
7
1_555
A
TYR
185
A
TYR
173
6
1_555
A
ASP
185
A
ASP
174
A
6
1_555
A
ARG
222
A
ARG
211
6
1_555
A
LYS
224
A
LYS
214
6
1_555
A
HOH
337
F
HOH
6
1_555
A
HOH
367
F
HOH
6
1_555
A
GLU
97
A
GLU
83
16
1_555
A
THR
98
A
THR
84
16
1_555
A
TYR
99
A
TYR
85
16
1_555
A
PHE
174
A
PHE
162
16
1_555
A
ASP
189
A
ASP
179
16
1_555
A
ALA
190
A
ALA
180
16
1_555
A
GLN
192
A
GLN
182
16
1_555
A
VAL
213
A
VAL
203
16
1_555
A
TRP
215
A
TRP
205
16
1_555
A
GLY
216
A
GLY
206
16
1_555
A
GLU
217
A
GLU
207
16
1_555
A
GLY
218
A
GLY
208
16
1_555
A
CYS
220
A
CYS
209
16
1_555
A
GLY
226
A
GLY
216
16
1_555
A
ILE
227
A
ILE
217
16
1_555
A
TYR
228
A
TYR
218
16
1_555
19
P 21 21 21