1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 He, F. Muto, Y. Inoue, M. Kigawa, T. Shirouzu, M. Terada, T. Yokoyama, S. RIKEN Structural Genomics/Proteomics Initiative (RSGI) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking Zn 2 65.409 ZINC ION non-polymer To be Published 0353 Solution structure of LIM domain in Four and a half LIM domains protein 2 10.2210/pdb1x4l/pdb pdb_00001x4l 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 7516.346 Skeletal muscle LIM-protein 3 LIM domain 1 man polymer 65.409 ZINC ION 2 syn non-polymer SLIM 3, LIM-domain protein DRAL, Four and a half LIM domains protein 2, FHL-2 no no GSSGSSGCAGCTNPISGLGGTKYISFEERQWHNDCFNCKKCSLSLVGRGFLTERDDILCPDCGKDISGPSSG GSSGSSGCAGCTNPISGLGGTKYISFEERQWHNDCFNCKKCSLSLVGRGFLTERDDILCPDCGKDISGPSSG A hsi002014447.1 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo sample Cell free protein synthesis FHL2, DRAL, SLIM3 9606 Homo sapiens PLASMID P040921-14 RIKEN Structural Genomics/Proteomics Initiative RSGI NPPSFA, National Project on Protein Structural and Functional Analyses database_2 pdbx_nmr_software pdbx_nmr_spectrometer pdbx_struct_assembly pdbx_struct_oper_list struct_conn struct_ref_seq_dif struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 2005-11-14 1 1 2008-04-30 1 2 2011-07-13 1 3 2022-03-02 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_nmr_software.name _pdbx_nmr_spectrometer.model _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id HELIX Determination method: author determined Y PDBJ Y PDBJ 2005-05-14 REL REL ZN ZINC ION target function,structures with the lowest energy 100 20 3D_15N-separated_NOESY 3D_13C-separated_NOESY 120mM 7.0 ambient 298 K torsion angle dynamics 1 lowest energy 0.8mM U-15, 13C; 20mM d-Tris-HCl(pH 7.0); 100mM NaCl; 100uM ZnCl2; 1mM d-DTT; 0.02% NaN3 90% H2O/10% D2O Bruker collection XwinNMR 2.6 Delaglio,F. processing NMRPipe 20031121 Johnson,B.A. data analysis NMRView 5.0.4 Kobayashi,N. data analysis KUJIRA 0.863 Guntert,P. structure solution CYANA 2.0.17 Guntert,P. refinement CYANA 2.0.17 800 Bruker AVANCE ZN 201 2 ZN ZN 201 A ZN 401 2 ZN ZN 401 A GLY 1 n 1 GLY 1 A SER 2 n 2 SER 2 A SER 3 n 3 SER 3 A GLY 4 n 4 GLY 4 A SER 5 n 5 SER 5 A SER 6 n 6 SER 6 A GLY 7 n 7 GLY 7 A CYS 8 n 8 CYS 8 A ALA 9 n 9 ALA 9 A GLY 10 n 10 GLY 10 A CYS 11 n 11 CYS 11 A THR 12 n 12 THR 12 A ASN 13 n 13 ASN 13 A PRO 14 n 14 PRO 14 A ILE 15 n 15 ILE 15 A SER 16 n 16 SER 16 A GLY 17 n 17 GLY 17 A LEU 18 n 18 LEU 18 A GLY 19 n 19 GLY 19 A GLY 20 n 20 GLY 20 A THR 21 n 21 THR 21 A LYS 22 n 22 LYS 22 A TYR 23 n 23 TYR 23 A ILE 24 n 24 ILE 24 A SER 25 n 25 SER 25 A PHE 26 n 26 PHE 26 A GLU 27 n 27 GLU 27 A GLU 28 n 28 GLU 28 A ARG 29 n 29 ARG 29 A GLN 30 n 30 GLN 30 A TRP 31 n 31 TRP 31 A HIS 32 n 32 HIS 32 A ASN 33 n 33 ASN 33 A ASP 34 n 34 ASP 34 A CYS 35 n 35 CYS 35 A PHE 36 n 36 PHE 36 A ASN 37 n 37 ASN 37 A CYS 38 n 38 CYS 38 A LYS 39 n 39 LYS 39 A LYS 40 n 40 LYS 40 A CYS 41 n 41 CYS 41 A SER 42 n 42 SER 42 A LEU 43 n 43 LEU 43 A SER 44 n 44 SER 44 A LEU 45 n 45 LEU 45 A VAL 46 n 46 VAL 46 A GLY 47 n 47 GLY 47 A ARG 48 n 48 ARG 48 A GLY 49 n 49 GLY 49 A PHE 50 n 50 PHE 50 A LEU 51 n 51 LEU 51 A THR 52 n 52 THR 52 A GLU 53 n 53 GLU 53 A ARG 54 n 54 ARG 54 A ASP 55 n 55 ASP 55 A ASP 56 n 56 ASP 56 A ILE 57 n 57 ILE 57 A LEU 58 n 58 LEU 58 A CYS 59 n 59 CYS 59 A PRO 60 n 60 PRO 60 A ASP 61 n 61 ASP 61 A CYS 62 n 62 CYS 62 A GLY 63 n 63 GLY 63 A LYS 64 n 64 LYS 64 A ASP 65 n 65 ASP 65 A ILE 66 n 66 ILE 66 A SER 67 n 67 SER 67 A GLY 68 n 68 GLY 68 A PRO 69 n 69 PRO 69 A SER 70 n 70 SER 70 A SER 71 n 71 SER 71 A GLY 72 n 72 GLY 72 A author_defined_assembly 1 monomeric A CYS 8 A SG CYS 8 1_555 A ZN 201 B ZN ZN 1_555 A CYS 11 A SG CYS 11 1_555 102.6 A CYS 8 A SG CYS 8 1_555 A ZN 201 B ZN ZN 1_555 A HIS 32 A ND1 HIS 32 1_555 106.9 A CYS 11 A SG CYS 11 1_555 A ZN 201 B ZN ZN 1_555 A HIS 32 A ND1 HIS 32 1_555 107.8 A CYS 8 A SG CYS 8 1_555 A ZN 201 B ZN ZN 1_555 A CYS 35 A SG CYS 35 1_555 112.7 A CYS 11 A SG CYS 11 1_555 A ZN 201 B ZN ZN 1_555 A CYS 35 A SG CYS 35 1_555 107.8 A HIS 32 A ND1 HIS 32 1_555 A ZN 201 B ZN ZN 1_555 A CYS 35 A SG CYS 35 1_555 117.9 A CYS 38 A SG CYS 38 1_555 A ZN 401 C ZN ZN 1_555 A CYS 41 A SG CYS 41 1_555 108.3 A CYS 38 A SG CYS 38 1_555 A ZN 401 C ZN ZN 1_555 A CYS 59 A SG CYS 59 1_555 110.9 A CYS 41 A SG CYS 41 1_555 A ZN 401 C ZN ZN 1_555 A CYS 59 A SG CYS 59 1_555 102.6 A CYS 38 A SG CYS 38 1_555 A ZN 401 C ZN ZN 1_555 A CYS 62 A SG CYS 62 1_555 112.0 A CYS 41 A SG CYS 41 1_555 A ZN 401 C ZN ZN 1_555 A CYS 62 A SG CYS 62 1_555 113.7 A CYS 59 A SG CYS 59 1_555 A ZN 401 C ZN ZN 1_555 A CYS 62 A SG CYS 62 1_555 109.0 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N ILE 24 A N ILE 24 A O TRP 31 A O TRP 31 A N LEU 51 A N LEU 51 A O LEU 58 A O LEU 58 1 A SER 5 -98.52 38.14 1 A THR 12 35.60 47.41 1 A GLU 28 -131.85 -44.58 1 A PHE 36 -57.14 89.49 1 A CYS 38 -43.37 166.47 1 A PHE 50 -48.05 165.28 1 A ARG 54 -35.95 -70.91 1 A ASP 65 -112.08 53.15 1 A PRO 69 -69.75 -173.85 1 A SER 70 -61.62 90.89 2 A SER 2 -124.58 -55.35 2 A THR 12 32.88 54.99 2 A ILE 15 -67.88 83.64 2 A PHE 36 -51.53 94.03 2 A CYS 38 -44.94 167.32 2 A LYS 40 -96.06 -60.10 2 A VAL 46 -43.28 109.27 2 A ARG 54 -33.43 -72.13 2 A PRO 69 -69.71 -174.45 3 A SER 2 -36.72 149.78 3 A THR 12 37.67 35.51 3 A SER 16 -174.40 149.11 3 A LEU 18 -83.01 46.41 3 A GLU 28 -132.86 -41.62 3 A ASN 33 -49.16 -19.07 3 A PHE 36 -55.34 100.80 3 A CYS 38 -42.91 166.39 3 A ARG 54 -32.32 -72.34 3 A SER 67 -80.45 42.55 3 A SER 71 -106.50 42.90 4 A ALA 9 -38.69 -31.10 4 A THR 12 36.60 54.95 4 A LYS 22 -84.21 31.47 4 A GLU 28 -131.49 -44.07 4 A PHE 36 -55.82 97.13 4 A CYS 38 -46.77 166.30 4 A SER 44 -56.12 106.50 4 A ARG 54 -34.17 -70.70 4 A LYS 64 -37.00 -37.72 4 A SER 67 -105.51 50.61 4 A PRO 69 -69.82 3.62 4 A SER 70 -36.91 151.94 5 A THR 12 33.40 52.00 5 A SER 16 71.16 43.69 5 A TYR 23 -46.28 155.74 5 A GLU 28 -132.59 -44.21 5 A PHE 36 -51.93 91.98 5 A CYS 38 -43.52 166.33 5 A PHE 50 -48.36 153.18 6 A SER 2 -43.30 105.30 6 A ALA 9 -81.42 39.83 6 A THR 12 39.08 48.20 6 A SER 16 -42.07 158.32 6 A GLU 28 -130.77 -40.38 6 A PHE 36 -45.92 97.87 6 A CYS 38 -43.41 166.76 6 A VAL 46 -40.89 109.51 6 A ASP 65 -87.03 30.91 6 A PRO 69 -69.71 83.44 7 A ALA 9 -86.84 45.27 7 A THR 12 35.36 43.63 7 A LYS 22 -83.70 37.98 7 A PHE 36 -56.03 102.80 7 A CYS 38 -44.23 169.02 7 A SER 67 -88.41 46.44 7 A SER 71 -87.51 42.10 8 A GLU 28 -134.88 -44.48 8 A PHE 36 -52.88 103.33 8 A CYS 38 -44.12 168.24 8 A VAL 46 -57.64 108.93 8 A ARG 54 -33.74 -70.17 8 A SER 70 -170.09 144.07 9 A SER 3 -80.64 46.63 9 A SER 5 -168.72 117.17 9 A CYS 8 -50.41 98.06 9 A THR 12 35.62 45.72 9 A GLU 28 -131.83 -43.94 9 A ASN 33 -33.71 -34.08 9 A PHE 36 -38.83 100.52 9 A CYS 38 -45.46 166.55 9 A ARG 54 -34.15 -72.74 9 A ILE 66 -48.28 105.06 9 A SER 67 -107.37 42.66 9 A PRO 69 -69.70 84.26 10 A SER 5 -168.72 110.38 10 A SER 6 -36.23 108.22 10 A THR 12 33.20 52.02 10 A SER 16 -39.50 114.98 10 A THR 21 -175.21 137.04 10 A GLU 28 -135.04 -42.73 10 A PHE 36 -54.31 95.44 10 A CYS 38 -45.34 166.31 10 A SER 70 -125.62 -58.62 11 A SER 5 -85.22 42.61 11 A THR 12 33.77 54.84 11 A THR 21 -174.61 136.78 11 A GLU 28 -132.88 -43.60 11 A PHE 36 -51.64 91.90 11 A CYS 38 -43.52 166.84 11 A ARG 54 -31.45 -72.45 11 A ILE 66 -38.10 107.10 11 A SER 67 -107.12 45.06 12 A SER 5 -67.30 91.07 12 A THR 12 33.94 49.04 12 A TYR 23 -49.41 157.83 12 A GLU 28 -131.39 -43.97 12 A PHE 36 -59.61 89.77 12 A CYS 38 -46.40 167.39 12 A VAL 46 -39.48 118.35 12 A ARG 54 -31.73 -73.68 12 A LYS 64 -29.75 -66.52 12 A ILE 66 -35.70 121.06 13 A CYS 8 -55.80 98.08 13 A THR 12 34.60 48.96 13 A SER 16 -170.90 123.76 13 A LYS 22 -76.30 48.03 13 A GLU 28 -130.48 -44.67 13 A PHE 36 -52.31 96.51 13 A CYS 38 -49.24 169.03 13 A ARG 54 -32.29 -70.76 13 A LYS 64 -39.81 -33.51 13 A SER 67 -89.30 42.16 13 A SER 70 -37.38 135.89 13 A SER 71 -172.12 133.95 14 A SER 6 -109.57 -64.35 14 A THR 12 34.63 54.50 14 A LEU 18 -71.17 -71.81 14 A PHE 36 -42.26 104.27 14 A CYS 38 -47.42 164.27 14 A SER 44 -52.71 109.86 14 A ARG 54 -31.55 -70.32 14 A ILE 66 -35.01 119.54 15 A THR 12 37.58 50.00 15 A GLU 28 -133.41 -40.60 15 A PHE 36 -57.59 99.83 15 A CYS 38 -44.37 168.67 15 A PRO 69 -69.79 90.61 15 A SER 70 -36.43 124.70 16 A SER 3 -101.73 -61.57 16 A ALA 9 -81.97 46.67 16 A THR 12 37.26 44.13 16 A ILE 15 -121.27 -58.41 16 A SER 16 35.23 54.13 16 A TYR 23 -44.43 151.70 16 A GLU 28 -133.30 -42.87 16 A PHE 36 -56.26 109.66 16 A CYS 38 -41.92 163.42 16 A VAL 46 -48.54 86.41 16 A LYS 64 -36.74 -35.82 17 A SER 3 -168.61 116.55 17 A ALA 9 -81.00 47.50 17 A THR 12 36.18 52.04 17 A LEU 18 -38.75 114.44 17 A THR 21 -35.51 150.67 17 A GLU 28 -130.58 -44.20 17 A PHE 36 -56.87 104.74 17 A CYS 38 -45.20 166.51 17 A SER 44 -56.65 109.79 17 A VAL 46 -57.15 108.14 17 A ARG 54 -32.96 -73.61 17 A LYS 64 -29.74 -55.92 17 A SER 67 -103.41 41.75 18 A SER 2 -39.48 153.28 18 A THR 12 33.76 54.64 18 A SER 16 -34.01 142.92 18 A LEU 18 -123.51 -66.43 18 A LYS 22 -78.78 38.96 18 A GLU 28 -133.41 -44.62 18 A PHE 36 -58.16 88.39 18 A CYS 38 -45.79 169.16 18 A VAL 46 -38.70 112.18 18 A ARG 54 -34.98 -70.48 19 A ALA 9 -39.86 -25.62 19 A THR 12 34.77 46.59 19 A SER 16 -34.92 127.80 19 A PHE 36 -52.68 100.98 19 A CYS 38 -48.65 164.80 19 A PHE 50 -47.21 152.22 19 A ARG 54 -33.13 -70.58 20 A THR 12 37.54 51.23 20 A SER 16 -34.75 111.25 20 A GLU 28 -130.67 -44.58 20 A ASN 33 -34.46 -32.75 20 A PHE 36 -42.60 101.57 20 A CYS 38 -48.62 165.34 20 A VAL 46 -44.49 108.29 20 A ARG 54 -30.09 -73.13 20 A SER 67 -81.98 43.33 Solution structure of LIM domain in Four and a half LIM domains protein 2 1 N N 2 N N 2 N N A PRO 60 A PRO 60 HELX_P A LYS 64 A LYS 64 1 1 5 metalc 2.348 A CYS 8 A SG CYS 8 1_555 A ZN 201 B ZN ZN 1_555 metalc 2.329 A CYS 11 A SG CYS 11 1_555 A ZN 201 B ZN ZN 1_555 metalc 2.038 A HIS 32 A ND1 HIS 32 1_555 A ZN 201 B ZN ZN 1_555 metalc 2.262 A CYS 35 A SG CYS 35 1_555 A ZN 201 B ZN ZN 1_555 metalc 2.356 A CYS 38 A SG CYS 38 1_555 A ZN 401 C ZN ZN 1_555 metalc 2.352 A CYS 41 A SG CYS 41 1_555 A ZN 401 C ZN ZN 1_555 metalc 2.322 A CYS 59 A SG CYS 59 1_555 A ZN 401 C ZN ZN 1_555 metalc 2.247 A CYS 62 A SG CYS 62 1_555 A ZN 401 C ZN ZN 1_555 METAL BINDING PROTEIN LIM domain, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, METAL BINDING PROTEIN FHL2_HUMAN UNP 1 221 Q14192 CAGCTNPISGLGGTKYISFEERQWHNDCFNCKKCSLSLVGRGFLTERDDILCPDCGKDI 221 279 1X4L 8 66 Q14192 A 1 8 66 1 cloning artifact GLY 1 1X4L A Q14192 UNP 1 1 cloning artifact SER 2 1X4L A Q14192 UNP 2 1 cloning artifact SER 3 1X4L A Q14192 UNP 3 1 cloning artifact GLY 4 1X4L A Q14192 UNP 4 1 cloning artifact SER 5 1X4L A Q14192 UNP 5 1 cloning artifact SER 6 1X4L A Q14192 UNP 6 1 cloning artifact GLY 7 1X4L A Q14192 UNP 7 1 cloning artifact SER 67 1X4L A Q14192 UNP 67 1 cloning artifact GLY 68 1X4L A Q14192 UNP 68 1 cloning artifact PRO 69 1X4L A Q14192 UNP 69 1 cloning artifact SER 70 1X4L A Q14192 UNP 70 1 cloning artifact SER 71 1X4L A Q14192 UNP 71 1 cloning artifact GLY 72 1X4L A Q14192 UNP 72 2 2 anti-parallel anti-parallel A ILE 24 A ILE 24 A SER 25 A SER 25 A GLN 30 A GLN 30 A TRP 31 A TRP 31 A LEU 51 A LEU 51 A THR 52 A THR 52 A ILE 57 A ILE 57 A LEU 58 A LEU 58 BINDING SITE FOR RESIDUE ZN A 201 A ZN 201 Software 4 BINDING SITE FOR RESIDUE ZN A 401 A ZN 401 Software 4 A CYS 8 A CYS 8 4 1_555 A CYS 11 A CYS 11 4 1_555 A HIS 32 A HIS 32 4 1_555 A CYS 35 A CYS 35 4 1_555 A CYS 38 A CYS 38 4 1_555 A CYS 41 A CYS 41 4 1_555 A CYS 59 A CYS 59 4 1_555 A CYS 62 A CYS 62 4 1_555