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2.826
-4.347
8.253
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-0.080
-0.030
7.390
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5.332
4.089
4.928
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4.649
3.598
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6.167
4.869
5.870
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3.970
3.729
5.671
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2.782
4.303
5.143
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1.777
4.609
6.237
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1.494
3.400
6.950
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2.191
5.567
7.343
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1.115
6.086
8.120
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4.608
8.201
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1.928
3.534
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2.224
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1.623
8.574
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0.457
9.151
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0.274
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-0.773
10.582
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2.848
-1.836
10.810
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11.071
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0.446
10.799
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1.494
10.071
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1.341
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3.605
4.432
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4.616
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6.407
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4.257
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3.286
5.008
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3.906
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2.071
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2.691
-2.655
11.382
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3.717
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10.345
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-0.891
0.483
11.225
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1.133
7.673
8.322
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8.141
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8.260
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7.856
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10.914
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11.214
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5.797
11.130
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5.223
12.384
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3.950
12.640
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2.446
3.758
12.186
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0.505
2.966
13.340
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-0.632
3.154
13.761
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1.766
13.557
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0.771
14.247
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0.517
15.553
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1.514
13.113
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3.007
0.430
13.329
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12.397
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2.433
11.876
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6.358
13.345
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12.605
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6.671
12.735
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10.998
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11.649
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10.498
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12.343
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4.565
11.648
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13.659
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0.984
14.358
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1.525
15.840
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0.314
16.050
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3.149
12.373
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2.614
10.803
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12.089
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6.695
13.326
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14.351
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12.967
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14.038
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13.603
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14.966
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5.540
14.688
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4.682
13.981
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-4.066
3.596
14.865
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-3.003
2.805
15.411
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-4.857
4.038
16.087
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-5.680
3.053
16.706
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-3.686
4.279
17.021
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-2.993
2.933
16.837
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-1.595
2.951
17.323
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-1.181
1.989
18.240
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-1.917
1.104
18.670
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0.142
2.081
18.660
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1.060
3.035
18.248
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2.210
3.030
18.682
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O
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0.531
3.981
17.299
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1.00
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C
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1.430
5.078
16.769
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-0.739
3.917
16.874
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-2.935
4.229
13.154
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-4.280
5.301
13.576
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-4.692
2.953
14.246
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7
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-5.456
4.926
15.889
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-3.062
5.100
16.666
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-4.011
4.439
18.045
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-3.576
2.141
17.308
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0.449
1.381
19.327
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2.401
5.042
17.258
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1
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1.00
1
H
0.37
0.959
6.041
16.877
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1
7
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1
H
0.36
1.537
4.981
15.707
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1
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-1.083
4.656
16.150
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-6.729
3.512
17.831
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-8.097
3.212
17.349
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-6.377
4.882
18.268
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-6.382
2.506
19.016
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-6.624
1.150
18.684
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-6.114
0.210
19.744
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-4.713
0.423
19.930
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-6.706
0.332
21.136
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-6.727
-0.880
21.888
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8
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O
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-5.731
1.287
21.789
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DT
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-4.457
0.594
21.326
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1
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-3.294
1.474
21.502
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-2.234
1.059
22.297
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1
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0.19
-2.205
-0.034
22.859
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-1.189
1.965
22.423
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1
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0.25
-1.120
3.217
21.835
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8
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1
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1.00
1
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0.28
-0.145
3.945
22.020
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8
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1
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O
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-2.274
3.537
21.033
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8
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1
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1.00
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0.29
-2.386
4.861
20.337
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1
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-3.291
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8
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9
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10
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10
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10
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10
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10
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10
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10
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31.243
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10
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10
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10
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10
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10
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11
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11
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11
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11
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11
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11
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11
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11
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11
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11
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11
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11
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11
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11
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11
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11
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11
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11
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33.185
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11
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11
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11
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33.801
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33.197
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11
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34.286
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35.333
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36.455
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34.552
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11
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34.290
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11
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32.655
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11
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11
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33.175
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11
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33.834
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1
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33.951
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1
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32.837
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1
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9.988
32.915
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1
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0.143
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31.395
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1
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1.190
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30.506
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1
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1
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31.594
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1
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8.492
31.680
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1
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32.047
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1
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0.073
7.136
32.274
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1
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1
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6.202
32.154
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1
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6.311
31.911
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1
1
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5.211
32.043
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1
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-3.828
7.579
31.525
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8.633
31.424
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12.369
33.881
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34.913
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28.858
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28.721
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29.208
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29.683
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30.045
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30.478
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29.511
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32.226
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30.705
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32.244
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3
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32.092
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3
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31.590
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3
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30.649
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3
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30.771
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3
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1.172
30.496
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3
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O
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3.250
29.442
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3
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5.037
2.702
29.330
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3
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C
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4.120
3.415
28.424
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3
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0.20
4.259
4.617
27.774
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3
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3.208
4.968
27.078
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3
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N
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2.320
3.925
27.286
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3
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C
0.15
1.026
3.697
26.825
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3
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0.421
4.589
26.031
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3
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0.440
2.563
27.226
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3
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1.077
1.710
28.026
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3
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C
0.16
2.295
1.828
28.518
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3
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0.17
2.868
2.976
28.102
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3
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C
0.37
4.678
4.645
32.713
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3
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3
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H
0.35
6.451
4.699
32.683
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3
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H
0.27
5.387
2.388
32.433
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3
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H
0.28
7.710
2.912
31.220
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3
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H
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6.451
4.332
29.557
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3
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H
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7.088
2.939
28.611
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3
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H
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5.041
1.635
29.119
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3
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H
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5.163
5.223
27.831
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3
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1
3
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H
0.19
-0.499
4.580
25.611
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3
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H61
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1
3
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H
0.23
0.962
5.386
25.821
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H62
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3
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H62
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1
3
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1
H
0.17
0.534
0.808
28.313
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3
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H2
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1
3
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H
0.25
6.056
-0.027
31.229
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P
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4
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P
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1
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1
P
0.29
5.687
0.365
32.610
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4
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B
OP1
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1
4
1.00
1
O
0.31
6.837
-1.268
31.020
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4
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1
4
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O
0.26
4.741
-0.134
30.336
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4
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1
4
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O
0.24
4.157
-1.426
30.225
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4
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B
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1
4
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C
0.22
4.315
-2.028
28.838
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4
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B
C4'
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1
4
1.00
1
C
0.22
3.716
-1.141
27.892
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4
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B
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1
4
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O
0.24
5.721
-2.246
28.259
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4
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B
C3'
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1
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C
0.23
5.833
-3.073
27.095
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4
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1
4
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O
0.22
5.976
-0.841
27.733
B
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4
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B
C2'
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1
4
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C
0.21
4.700
-0.824
26.907
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4
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B
C1'
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1
4
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C
0.20
4.360
0.407
26.163
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N9
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4
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B
N9
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1
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1.00
1
N
0.23
5.079
1.565
26.004
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C8
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4
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B
C8
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1
4
1.00
1
C
0.24
4.487
2.461
25.260
B
N7
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4
ATOM
B
N7
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1
4
1.00
1
N
0.20
3.292
1.853
24.905
B
C5
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4
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B
C5
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1
4
1.00
1
C
0.19
2.220
2.286
24.124
B
C6
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4
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B
C6
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1
4
1.00
1
C
0.23
2.213
3.491
23.549
B
N6
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4
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B
N6
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1
4
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1
N
0.16
1.189
1.438
23.970
B
N1
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4
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B
N1
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1
4
1.00
1
N
0.14
1.222
0.240
24.554
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C2
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4
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B
C2
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1
4
1.00
1
C
0.16
2.180
-0.267
25.310
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N3
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4
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B
N3
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1
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1
N
0.18
3.203
0.602
25.449
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4
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B
C4
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1
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1
C
0.34
3.100
-1.360
30.480
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4
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B
H5'
DA
1
4
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1
H
0.33
4.661
-2.071
30.943
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4
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B
H5''
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1
4
1.00
1
H
0.27
3.761
-2.967
28.842
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4
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B
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1
4
1.00
1
H
0.30
6.420
-2.589
29.022
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4
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B
H3'
DA
1
4
1.00
1
H
0.28
5.957
-0.098
28.525
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4
ATOM
B
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DA
1
4
1.00
1
H
0.27
6.872
-0.762
27.118
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4
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B
H2''
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1
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H
0.24
4.750
-1.649
26.198
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4
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B
H1'
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1
4
1.00
1
H
0.28
6.057
1.724
26.457
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4
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B
H8
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1
4
1.00
1
H
0.26
1.430
3.794
22.980
B
H61
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4
ATOM
B
H61
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1
4
1.00
1
H
0.26
3.003
4.108
23.686
B
H62
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4
ATOM
B
H62
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1
4
1.00
1
H
0.15
0.356
-0.403
24.393
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H2
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4
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B
H2
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1
4
1.00
1
H
0.18
4.987
-4.431
26.918
B
P
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5
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B
P
DA
1
5
1.00
1
P
0.21
4.757
-5.025
28.255
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OP1
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5
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B
OP1
DA
1
5
1.00
1
O
0.25
5.631
-5.236
25.855
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OP2
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5
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B
OP2
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1
5
1.00
1
O
0.18
3.596
-3.897
26.352
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5
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B
O5'
DA
1
5
1.00
1
O
0.17
2.401
-4.422
26.914
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5
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B
C5'
DA
1
5
1.00
1
C
0.17
1.395
-4.785
25.834
B
C4'
DA
5
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B
C4'
DA
1
5
1.00
1
C
0.20
1.218
-3.624
25.016
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5
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B
O4'
DA
1
5
1.00
1
O
0.16
1.765
-5.859
24.816
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C3'
DA
5
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B
C3'
DA
1
5
1.00
1
C
0.16
0.694
-6.307
23.985
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O3'
DA
5
ATOM
B
O3'
DA
1
5
1.00
1
O
0.19
2.684
-5.032
23.936
B
C2'
DA
5
ATOM
B
C2'
DA
1
5
1.00
1
C
0.19
1.677
-3.919
23.692
B
C1'
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5
ATOM
B
C1'
DA
1
5
1.00
1
C
0.20
2.246
-2.711
23.063
B
N9
DA
5
ATOM
B
N9
DA
1
5
1.00
1
N
0.21
3.508
-2.188
23.187
B
C8
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5
ATOM
B
C8
DA
1
5
1.00
1
C
0.21
3.704
-1.105
22.484
B
N7
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5
ATOM
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1
5
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1
N
0.19
2.487
-0.901
21.856
B
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5
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1
5
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1
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0.19
2.059
0.087
20.975
B
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5
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1
5
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1
C
0.20
2.906
1.047
20.590
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5
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1
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0.19
0.796
0.003
20.539
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5
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1
5
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1
N
0.20
0.009
-0.994
20.945
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5
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1
5
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1
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0.21
0.312
-1.980
21.773
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5
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1
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1
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0.19
1.588
-1.871
22.199
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5
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1
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1
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0.24
1.968
-3.667
27.570
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5
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5
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2.659
-5.303
27.503
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5
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0.445
-5.036
26.307
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5
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5
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H
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2.248
-6.720
25.279
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5
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1
5
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1
H
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3.542
-4.679
24.506
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5
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5
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H
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2.990
-5.528
23.013
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5
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5
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0.857
-4.313
23.093
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5
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H
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4.276
-2.635
23.818
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5
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1
5
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1
H
0.23
2.765
1.845
19.985
B
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5
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1
5
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1
H
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3.820
0.965
20.951
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5
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1
5
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1
H
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-1.006
-0.998
20.547
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5
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1
5
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1
H
0.17
0.820
-7.759
23.318
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6
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6
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-0.449
-8.087
22.629
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6
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6
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1
O
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1.354
-8.682
24.344
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6
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6
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1.968
-7.538
22.217
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6
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6
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O
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1.730
-7.838
20.847
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6
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1
6
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C
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0.670
-6.924
20.254
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6
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1.076
-5.562
20.425
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6
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O
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1.172
-4.976
19.117
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2.142
-3.863
19.085
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1
6
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1
N
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3.345
-3.975
19.709
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6
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1
C
0.18
1.785
-2.712
18.398
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6
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0.700
-2.607
17.830
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6
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O
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2.707
-1.672
18.372
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6
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2.351
-0.516
17.708
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6
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2.097
-0.458
16.302
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6
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3.953
-1.732
18.992
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6
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4.734
-0.782
18.944
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6
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O
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4.233
-2.971
19.681
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6
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0.28
5.567
-3.135
20.390
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6
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1.557
-6.180
18.270
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6
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0.403
-7.036
18.758
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6
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-0.780
-6.393
18.294
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6
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O
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1.398
-8.873
20.765
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6
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6
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2.674
-7.717
20.320
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6
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6
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-7.080
20.780
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6
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6
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0.191
-4.624
18.794
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6
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3.590
-4.895
20.240
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6
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1
H
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3.006
0.314
17.968
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1
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1
H
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1.372
-0.346
18.155
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6
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H
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3.077
-0.221
15.881
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1
6
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H
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1.852
-1.471
15.979
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6
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6.107
-3.977
19.956
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6
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H
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6.149
-2.222
20.267
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6
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H
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5.394
-3.321
21.449
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6
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2.523
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18.555
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-5.953
17.206
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6
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-8.068
18.408
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6
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-7.249
17.398
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P
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1
7
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P
0.29
-2.690
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18.295
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7
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7
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1
O
0.24
-0.997
-7.957
16.370
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7
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O
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-2.655
-6.132
16.651
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7
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O
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-3.515
-5.308
17.429
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DT
7
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DT
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C
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-4.108
-4.194
16.586
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DT
7
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DT
1
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1
C
0.20
-3.002
-3.533
15.960
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7
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O
0.19
-4.995
-4.578
15.406
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7
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DT
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C
0.20
-5.703
-3.517
14.777
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7
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DT
1
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1
O
0.20
-3.906
-4.991
14.438
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7
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DT
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C
0.22
-3.076
-3.711
14.537
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DT
7
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DT
1
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C
0.19
-1.708
-3.808
13.965
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N1
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7
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N1
DT
1
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1
N
0.18
-1.243
-2.773
13.157
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C2
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7
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C2
DT
1
7
1.00
1
C
0.22
-1.914
-1.778
12.888
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7
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O2
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1
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1.00
1
O
0.18
0.044
-2.924
12.649
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N3
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7
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N3
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1
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1.00
1
N
0.20
0.886
-4.003
12.877
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C4
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7
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C4
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1
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1.00
1
C
0.23
2.011
-4.045
12.380
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7
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O4
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1
7
1.00
1
O
0.20
0.315
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13.723
B
C5
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7
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B
C5
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1
7
1.00
1
C
0.25
1.141
-6.257
14.041
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C7
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7
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C7
DT
1
7
1.00
1
C
0.20
-0.926
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14.229
B
C6
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7
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1
7
1.00
1
C
0.29
-2.924
-4.878
18.238
B
H5'
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7
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DT
1
7
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1
H
0.28
-4.306
-5.925
17.855
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DT
7
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DT
1
7
1.00
1
H
0.24
-4.632
-3.489
17.233
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7
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H4'
DT
1
7
1.00
1
H
0.26
-5.694
-5.375
15.656
B
H3'
DT
7
ATOM
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H3'
DT
1
7
1.00
1
H
0.24
-3.388
-5.861
14.839
B
H2'
DT
7
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H2'
DT
1
7
1.00
1
H
0.28
-4.281
-5.175
13.433
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H2''
DT
7
ATOM
B
H2''
DT
1
7
1.00
1
H
0.24
-3.627
-2.884
14.085
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7
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H1'
DT
1
7
1.00
1
H
0.20
0.386
-2.169
12.062
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H3
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7
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H3
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1
7
1.00
1
H
0.41
1.223
-6.401
15.102
B
H71
DT
7
ATOM
B
H71
DT
1
7
1.00
1
H
0.43
0.636
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13.724
B
H72
DT
7
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B
H72
DT
1
7
1.00
1
H
0.41
2.125
-6.186
13.576
B
H73
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7
ATOM
B
H73
DT
1
7
1.00
1
H
0.22
-1.310
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14.865
B
H6
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7
ATOM
B
H6
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1
7
1.00
1
H
0.19
-6.939
-3.878
13.821
B
P
DT
8
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B
P
DT
1
8
1.00
1
P
0.20
-8.194
-3.533
14.525
B
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8
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B
OP1
DT
1
8
1.00
1
O
0.30
-6.734
-5.246
13.292
B
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8
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B
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1
8
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1
O
0.19
-6.735
-2.850
12.622
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8
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B
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DT
1
8
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1
O
0.19
-6.969
-1.484
12.928
B
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8
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B
C5'
DT
1
8
1.00
1
C
0.19
-6.544
-0.579
11.792
B
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8
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B
C4'
DT
1
8
1.00
1
C
0.19
-5.155
-0.817
11.530
B
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8
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B
O4'
DT
1
8
1.00
1
O
0.20
-7.207
-0.792
10.438
B
C3'
DT
8
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B
C3'
DT
1
8
1.00
1
C
0.20
-7.078
0.266
9.489
B
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DT
8
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B
O3'
DT
1
8
1.00
1
O
0.21
-6.352
-1.954
9.958
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C2'
DT
8
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B
C2'
DT
1
8
1.00
1
C
0.20
-5.002
-1.285
10.184
B
C1'
DT
8
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B
C1'
DT
1
8
1.00
1
C
0.21
-3.792
-2.144
10.073
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N1
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8
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B
N1
DT
1
8
1.00
1
N
0.20
-2.708
-1.645
9.355
B
C2
DT
8
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B
C2
DT
1
8
1.00
1
C
0.20
-2.719
-0.543
8.811
B
O2
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8
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B
O2
DT
1
8
1.00
1
O
0.22
-1.594
-2.473
9.275
B
N3
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8
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B
N3
DT
1
8
1.00
1
N
0.25
-1.475
-3.730
9.839
B
C4
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8
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B
C4
DT
1
8
1.00
1
C
0.28
-0.438
-4.380
9.708
B
O4
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8
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B
O4
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1
8
1.00
1
O
0.25
-2.644
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10.559
B
C5
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8
ATOM
B
C5
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1
8
1.00
1
C
0.29
-2.610
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11.189
B
C7
DT
8
ATOM
B
C7
DT
1
8
1.00
1
C
0.23
-3.743
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10.659
B
C6
DT
8
ATOM
B
C6
DT
1
8
1.00
1
C
0.24
-6.405
-1.237
13.828
B
H5'
DT
8
ATOM
B
H5'
DT
1
8
1.00
1
H
0.25
-8.032
-1.358
13.134
B
H5''
DT
8
ATOM
B
H5''
DT
1
8
1.00
1
H
0.24
-6.672
0.460
12.097
B
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DT
8
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B
H4'
DT
1
8
1.00
1
H
0.32
-8.265
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10.537
B
H3'
DT
8
ATOM
B
H3'
DT
1
8
1.00
1
H
0.27
-6.497
-2.814
10.612
B
H2'
DT
8
ATOM
B
H2'
DT
1
8
1.00
1
H
0.27
-6.524
-2.205
8.913
B
H2''
DT
8
ATOM
B
H2''
DT
1
8
1.00
1
H
0.23
-4.917
-0.433
9.507
B
H1'
DT
8
ATOM
B
H1'
DT
1
8
1.00
1
H
0.21
-0.789
-2.132
8.760
B
H3
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8
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B
H3
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1
8
1.00
1
H
0.66
-2.793
-5.760
12.187
B
H71
DT
8
ATOM
B
H71
DT
1
8
1.00
1
H
0.46
-3.594
-5.935
11.174
B
H72
DT
8
ATOM
B
H72
DT
1
8
1.00
1
H
0.50
-1.731
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10.946
B
H73
DT
8
ATOM
B
H73
DT
1
8
1.00
1
H
0.26
-4.606
-3.748
11.215
B
H6
DT
8
ATOM
B
H6
DT
1
8
1.00
1
H
0.18
-8.323
0.492
8.503
B
P
DT
9
ATOM
B
P
DT
1
9
1.00
1
P
0.24
-8.967
1.781
8.844
B
OP1
DT
9
ATOM
B
OP1
DT
1
9
1.00
1
O
0.21
-9.122
-0.755
8.505
B
OP2
DT
9
ATOM
B
OP2
DT
1
9
1.00
1
O
0.29
-7.653
0.641
7.062
B
O5'
DT
9
ATOM
B
O5'
DT
1
9
1.00
1
O
0.21
-7.119
1.916
6.735
B
C5'
DT
9
ATOM
B
C5'
DT
1
9
1.00
1
C
0.19
-6.061
1.804
5.660
B
C4'
DT
9
ATOM
B
C4'
DT
1
9
1.00
1
C
0.22
-5.108
0.840
6.121
B
O4'
DT
9
ATOM
B
O4'
DT
1
9
1.00
1
O
0.21
-6.456
1.258
4.287
B
C3'
DT
9
ATOM
B
C3'
DT
1
9
1.00
1
C
0.21
-5.487
1.477
3.259
B
O3'
DT
9
ATOM
B
O3'
DT
1
9
1.00
1
O
0.20
-6.454
-0.230
4.609
B
C2'
DT
9
ATOM
B
C2'
DT
1
9
1.00
1
C
0.18
-5.029
-0.194
5.136
B
C1'
DT
9
ATOM
B
C1'
DT
1
9
1.00
1
C
0.16
-4.451
-1.453
5.658
B
N1
DT
9
ATOM
B
N1
DT
1
9
1.00
1
N
0.14
-3.141
-1.716
5.299
B
C2
DT
9
ATOM
B
C2
DT
1
9
1.00
1
C
0.15
-2.483
-0.961
4.586
B
O2
DT
9
ATOM
B
O2
DT
1
9
1.00
1
O
0.14
-2.600
-2.893
5.781
B
N3
DT
9
ATOM
B
N3
DT
1
9
1.00
1
N
0.17
-3.237
-3.820
6.580
B
C4
DT
9
ATOM
B
C4
DT
1
9
1.00
1
C
0.20
-2.642
-4.833
6.949
B
O4
DT
9
ATOM
B
O4
DT
1
9
1.00
1
O
0.18
-4.598
-3.469
6.906
B
C5
DT
9
ATOM
B
C5
DT
1
9
1.00
1
C
0.23
-5.401
-4.436
7.763
B
C7
DT
9
ATOM
B
C7
DT
1
9
1.00
1
C
0.17
-5.158
-2.323
6.450
B
C6
DT
9
ATOM
B
C6
DT
1
9
1.00
1
C
0.29
-6.680
2.336
7.640
B
H5'
DT
9
ATOM
B
H5'
DT
1
9
1.00
1
H
0.33
-7.928
2.564
6.399
B
H5''
DT
9
ATOM
B
H5''
DT
1
9
1.00
1
H
0.27
-5.563
2.767
5.550
B
H4'
DT
9
ATOM
B
H4'
DT
1
9
1.00
1
H
0.26
-7.415
1.659
3.963
B
H3'
DT
9
ATOM
B
H3'
DT
1
9
1.00
1
H
0.25
-7.174
-0.465
5.394
B
H2'
DT
9
ATOM
B
H2'
DT
1
9
1.00
1
H
0.25
-6.573
-0.872
3.738
B
H2''
DT
9
ATOM
B
H2''
DT
1
9
1.00
1
H
0.23
-4.389
0.160
4.327
B
H1'
DT
9
ATOM
B
H1'
DT
1
9
1.00
1
H
0.15
-1.646
-3.073
5.505
B
H3
DT
9
ATOM
B
H3
DT
1
9
1.00
1
H
0.27
-4.914
-5.385
7.977
B
H71
DT
9
ATOM
B
H71
DT
1
9
1.00
1
H
0.29
-6.006
-4.192
8.582
B
H72
DT
9
ATOM
B
H72
DT
1
9
1.00
1
H
0.33
-6.374
-4.397
7.371
B
H73
DT
9
ATOM
B
H73
DT
1
9
1.00
1
H
0.21
-6.189
-2.087
6.711
B
H6
DT
9
ATOM
B
H6
DT
1
9
1.00
1
H
0.19
-5.360
2.960
2.637
B
P
DC
10
ATOM
B
P
DC
1
10
1.00
1
P
0.21
-5.000
3.900
3.721
B
OP1
DC
10
ATOM
B
OP1
DC
1
10
1.00
1
O
0.27
-6.572
3.210
1.826
B
OP2
DC
10
ATOM
B
OP2
DC
1
10
1.00
1
O
0.19
-4.121
2.872
1.634
B
O5'
DC
10
ATOM
B
O5'
DC
1
10
1.00
1
O
0.20
-2.994
3.700
1.911
B
C5'
DC
10
ATOM
B
C5'
DC
1
10
1.00
1
C
0.17
-1.708
3.096
1.372
B
C4'
DC
10
ATOM
B
C4'
DC
1
10
1.00
1
C
0.15
-1.671
1.767
1.895
B
O4'
DC
10
ATOM
B
O4'
DC
1
10
1.00
1
O
0.18
-1.567
2.868
-0.132
B
C3'
DC
10
ATOM
B
C3'
DC
1
10
1.00
1
C
0.17
-0.260
2.495
-0.575
B
O3'
DC
10
ATOM
B
O3'
DC
1
10
1.00
1
O
0.18
-2.464
1.646
-0.264
B
C2'
DC
10
ATOM
B
C2'
DC
1
10
1.00
1
C
0.16
-1.755
0.828
0.813
B
C1'
DC
10
ATOM
B
C1'
DC
1
10
1.00
1
C
0.15
-2.415
-0.401
1.275
B
N1
DC
10
ATOM
B
N1
DC
1
10
1.00
1
N
0.15
-1.600
-1.481
1.460
B
C2
DC
10
ATOM
B
C2
DC
1
10
1.00
1
C
0.16
-0.396
-1.428
1.238
B
O2
DC
10
ATOM
B
O2
DC
1
10
1.00
1
O
0.16
-2.160
-2.630
1.893
B
N3
DC
10
ATOM
B
N3
DC
1
10
1.00
1
N
0.17
-3.460
-2.741
2.140
B
C4
DC
10
ATOM
B
C4
DC
1
10
1.00
1
C
0.19
-3.920
-3.919
2.566
B
N4
DC
10
ATOM
B
N4
DC
1
10
1.00
1
N
0.18
-4.325
-1.621
1.951
B
C5
DC
10
ATOM
B
C5
DC
1
10
1.00
1
C
0.17
-3.752
-0.478
1.517
B
C6
DC
10
ATOM
B
C6
DC
1
10
1.00
1
C
0.27
-2.922
3.801
2.994
B
H5'
DC
10
ATOM
B
H5'
DC
1
10
1.00
1
H
0.28
-3.160
4.683
1.472
B
H5''
DC
10
ATOM
B
H5''
DC
1
10
1.00
1
H
0.23
-0.858
3.659
1.759
B
H4'
DC
10
ATOM
B
H4'
DC
1
10
1.00
1
H
0.25
-1.898
3.741
-0.694
B
H3'
DC
10
ATOM
B
H3'
DC
1
10
1.00
1
H
0.25
-3.483
1.906
0.025
B
H2'
DC
10
ATOM
B
H2'
DC
1
10
1.00
1
H
0.26
-2.438
1.163
-1.240
B
H2''
DC
10
ATOM
B
H2''
DC
1
10
1.00
1
H
0.21
-0.762
0.497
0.502
B
H1'
DC
10
ATOM
B
H1'
DC
1
10
1.00
1
H
0.22
-3.312
-4.731
2.695
B
H41
DC
10
ATOM
B
H41
DC
1
10
1.00
1
H
0.20
-4.884
-4.029
2.772
B
H42
DC
10
ATOM
B
H42
DC
1
10
1.00
1
H
0.22
-5.395
-1.678
2.148
B
H5
DC
10
ATOM
B
H5
DC
1
10
1.00
1
H
0.21
-4.364
0.389
1.350
B
H6
DC
10
ATOM
B
H6
DC
1
10
1.00
1
H
0.15
0.884
3.612
-0.737
B
P
DG
11
ATOM
B
P
DG
1
11
1.00
1
P
0.21
1.616
3.761
0.538
B
OP1
DG
11
ATOM
B
OP1
DG
1
11
1.00
1
O
0.22
0.266
4.800
-1.368
B
OP2
DG
11
ATOM
B
OP2
DG
1
11
1.00
1
O
0.21
1.892
2.972
-1.807
B
O5'
DG
11
ATOM
B
O5'
DG
1
11
1.00
1
O
0.28
3.250
2.871
-1.392
B
C5'
DG
11
ATOM
B
C5'
DG
1
11
1.00
1
C
0.27
3.864
1.515
-1.717
B
C4'
DG
11
ATOM
B
C4'
DG
1
11
1.00
1
C
0.25
2.911
0.548
-1.274
B
O4'
DG
11
ATOM
B
O4'
DG
1
11
1.00
1
O
0.26
4.072
1.069
-3.160
B
C3'
DG
11
ATOM
B
C3'
DG
1
11
1.00
1
C
0.29
4.791
-0.172
-3.145
B
O3'
DG
11
ATOM
B
O3'
DG
1
11
1.00
1
O
0.26
2.625
0.827
-3.550
B
C2'
DG
11
ATOM
B
C2'
DG
1
11
1.00
1
C
0.24
2.388
-0.155
-2.416
B
C1'
DG
11
ATOM
B
C1'
DG
1
11
1.00
1
C
0.22
0.995
-0.572
-2.149
B
N9
DG
11
ATOM
B
N9
DG
1
11
1.00
1
N
0.22
-0.164
0.159
-2.188
B
C8
DG
11
ATOM
B
C8
DG
1
11
1.00
1
C
0.22
-1.232
-0.523
-1.870
B
N7
DG
11
ATOM
B
N7
DG
1
11
1.00
1
N
0.21
-0.752
-1.792
-1.602
B
C5
DG
11
ATOM
B
C5
DG
1
11
1.00
1
C
0.21
-1.454
-2.956
-1.205
B
C6
DG
11
ATOM
B
C6
DG
1
11
1.00
1
C
0.22
-2.661
-3.111
-1.003
B
O6
DG
11
ATOM
B
O6
DG
1
11
1.00
1
O
0.22
-0.595
-4.030
-1.037
B
N1
DG
11
ATOM
B
N1
DG
1
11
1.00
1
N
0.23
0.788
-4.005
-1.230
B
C2
DG
11
ATOM
B
C2
DG
1
11
1.00
1
C
0.24
1.504
-5.125
-1.037
B
N2
DG
11
ATOM
B
N2
DG
1
11
1.00
1
N
0.23
1.435
-2.894
-1.606
B
N3
DG
11
ATOM
B
N3
DG
1
11
1.00
1
N
0.21
0.607
-1.835
-1.772
B
C4
DG
11
ATOM
B
C4
DG
1
11
1.00
1
C
0.38
3.246
3.008
-0.310
B
H5'
DG
11
ATOM
B
H5'
DG
1
11
1.00
1
H
0.39
3.834
3.670
-1.846
B
H5''
DG
11
ATOM
B
H5''
DG
1
11
1.00
1
H
0.36
4.792
1.405
-1.158
B
H4'
DG
11
ATOM
B
H4'
DG
1
11
1.00
1
H
0.33
4.584
1.820
-3.760
B
H3'
DG
11
ATOM
B
H3'
DG
1
11
1.00
1
H
0.51
4.881
-0.447
-2.224
B
HO3'
DG
11
ATOM
B
HO3'
DG
1
11
1.00
1
H
0.28
2.031
1.734
-3.431
B
H2'
DG
11
ATOM
B
H2'
DG
1
11
1.00
1
H
0.37
2.483
0.373
-4.532
B
H2''
DG
11
ATOM
B
H2''
DG
1
11
1.00
1
H
0.30
3.000
-1.037
-2.604
B
H1'
DG
11
ATOM
B
H1'
DG
1
11
1.00
1
H
0.25
-0.191
1.215
-2.455
B
H8
DG
11
ATOM
B
H8
DG
1
11
1.00
1
H
0.25
-1.085
-4.860
-0.734
B
H1
DG
11
ATOM
B
H1
DG
1
11
1.00
1
H
0.26
1.052
-6.003
-0.755
B
H21
DG
11
ATOM
B
H21
DG
1
11
1.00
1
H
0.28
2.508
-5.128
-1.159
B
H22
DG
11
ATOM
B
H22
DG
1
11
1.00
1
H
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
da Silva, M.W.
Bierbryer, R.G.
Wilds, C.J.
Noronha, A.M.
Colvin, O.M.
Miller, P.S.
Gamcsik, M.P.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
C12 H19 N2 O8 P
350.262
n
N3-ETHYL-THYMIDINE-5'-MONOPHOSPHATE
DNA linking
UK
Bioorg.Med.Chem.
BMECEP
1200
0968-0896
13
4580
4587
10.1016/j.bmc.2005.03.032
15953553
Intrastrand base-stacking buttresses widening of major groove in interstrand cross-linked B-DNA.
2005
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
SINGLE WAVELENGTH
M
1
1.0
3376.263
5'-D(*CP*GP*AP*AP*AP*(TTM)P*TP*TP*TP*CP*G)-3'
2
syn
polymer
no
yes
(DC)(DG)(DA)(DA)(DA)(TTM)(DT)(DT)(DT)(DC)(DG)
CGAAATTTTCG
A,B
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
-0.250
1
19
A
1
B
11
-1.073
A_DC1:DG11_B
1
-0.506
0.388
0.008
-0.201
-0.282
1
19
A
2
B
10
-0.318
A_DG2:DC10_B
2
-0.848
-0.247
-0.032
-0.203
0.161
1
20
A
3
B
9
-1.797
A_DA3:DT9_B
3
0.748
-0.255
0.040
-0.213
0.014
1
20
A
4
B
8
-5.386
A_DA4:DT8_B
4
-0.259
0.417
-0.015
-0.082
1.128
1
20
A
5
B
7
-5.851
A_DA5:DT7_B
5
0.345
-0.248
0.058
-0.195
-1.570
1
20
A
7
B
5
-5.527
A_DT7:DA5_B
6
2.514
0.244
-0.034
-0.199
-0.879
1
20
A
8
B
4
-4.647
A_DT8:DA4_B
7
0.928
-0.363
0.016
-0.092
-0.100
1
20
A
9
B
3
-4.006
A_DT9:DA3_B
8
0.705
0.253
0.039
-0.211
0.128
1
19
A
10
B
2
-1.429
A_DC10:DG2_B
9
-0.683
0.239
-0.023
-0.204
0.488
1
19
A
11
B
1
-0.204
A_DG11:DC1_B
10
-0.583
-0.541
0.019
-0.233
2.917
44.235
A
A
1
2
-2.831
B
B
11
10
2.966
-2.131
0.310
1.229
AA_DC1DG2:DC10DG11_BB
1
1.910
-2.538
44.147
1.811
-0.251
3.143
50.722
A
A
2
3
-19.004
B
B
10
9
3.344
-16.035
0.210
0.170
AA_DG2DA3:DT9DC10_BB
2
0.222
-0.263
48.280
1.350
-0.229
3.241
34.950
A
A
3
4
6.802
B
B
9
8
3.290
4.074
0.116
-0.120
AA_DA3DA4:DT8DT9_BB
3
-2.303
3.846
34.645
-0.817
-0.543
3.153
34.070
A
A
4
5
-3.106
B
B
8
7
3.126
-1.818
0.127
-0.852
AA_DA4DA5:DT7DT8_BB
4
-2.113
3.610
33.960
-1.176
-0.539
3.643
38.418
A
A
7
8
-21.379
B
B
5
4
3.420
-13.777
0.124
-1.256
AA_DT7DT8:DA4DA5_BB
5
0.074
-0.115
35.950
0.012
-0.179
3.214
32.940
A
A
8
9
9.035
B
B
4
3
3.397
5.093
-0.467
-0.459
AA_DT8DT9:DA3DA4_BB
6
3.831
-6.797
32.334
-1.694
1.490
3.286
49.785
A
A
9
10
-20.704
B
B
3
2
3.395
-17.116
0.393
-0.241
AA_DT9DC10:DG2DA3_BB
7
-0.490
0.592
46.925
1.037
-0.505
2.866
44.341
A
A
10
11
-5.033
B
B
2
1
2.977
-3.793
-0.406
1.432
AA_DC10DG11:DC1DG2_BB
8
-2.198
2.916
44.134
2.212
0.355
ndb_struct_conf_na
pdbx_entity_src_syn
pdbx_nmr_exptl_sample_conditions
pdbx_struct_assembly
pdbx_struct_assembly_prop
pdbx_struct_oper_list
repository
Initial release
Version format compliance
Version format compliance
Data collection
Derived calculations
Experimental preparation
Source and taxonomy
1
0
2005-08-16
1
1
2008-04-30
1
2
2011-07-13
1
3
2018-06-06
_pdbx_nmr_exptl_sample_conditions.temperature
RCSB
Y
RCSB
2004-09-02
REL
32630
synthetic construct
sample
Structure determined using standard NMR techniques
structures with the lowest energy
15
1
DQF-COSY
2D TOCSY
2D NOESY
JR-NOESY
31P,1H HETCOR
100 mM NaCl
7.4
normal
293
K
100 mM NaCl
7.4
normal
273
K
distance geometry, simulated annealing, molecular dynamics
1
lowest energy
1.5 mM sample in 100 mM NaCl, 50 mM phosphate pH 7.4, D2O
D2O
1.5 mM sample in 100 mM NaCl, 50 mM phosphate pH 7.4, H2O
H2O
Brunger
refinement
X-PLOR
2.1
800
Varian
INOVA
CYT
1
n
1
DC
1
A
GUA
2
n
2
DG
2
A
ADE
3
n
3
DA
3
A
ADE
4
n
4
DA
4
A
ADE
5
n
5
DA
5
A
THZ
6
n
6
TTM
6
A
THY
7
n
7
DT
7
A
THY
8
n
8
DT
8
A
THY
9
n
9
DT
9
A
CYT
10
n
10
DC
10
A
GUA
11
n
11
DG
11
A
CYT
1
n
1
DC
1
B
GUA
2
n
2
DG
2
B
ADE
3
n
3
DA
3
B
ADE
4
n
4
DA
4
B
ADE
5
n
5
DA
5
B
THZ
6
n
6
TTM
6
B
THY
7
n
7
DT
7
B
THY
8
n
8
DT
8
B
THY
9
n
9
DT
9
B
CYT
10
n
10
DC
10
B
GUA
11
n
11
DG
11
B
author_defined_assembly
2
dimeric
2500
-2
3590
A
TTM
6
N3-ETHYL-THYMIDINE-5'-MONOPHOSPHATE
A
TTM
6
DT
B
TTM
6
N3-ETHYL-THYMIDINE-5'-MONOPHOSPHATE
B
TTM
6
DT
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
identity operation
0.0000000000
0.0000000000
0.0000000000
1
-4.63
0.70
102.20
97.57
A
A
A
C4'
C3'
C2'
DC
DC
DC
1
1
1
N
1
-5.89
0.80
102.40
96.51
A
A
A
C3'
C2'
C1'
DC
DC
DC
1
1
1
N
1
-6.17
0.80
102.40
96.23
A
A
A
C3'
C2'
C1'
DA
DA
DA
3
3
3
N
1
3.85
0.60
118.60
122.45
A
A
A
N1
C6
N6
DA
DA
DA
3
3
3
N
1
8.11
1.20
119.70
127.81
A
A
A
C3'
O3'
P
DA
DA
DA
3
3
4
Y
1
-4.48
0.70
102.20
97.72
A
A
A
C4'
C3'
C2'
DA
DA
DA
4
4
4
N
1
-7.95
0.80
102.40
94.45
A
A
A
C3'
C2'
C1'
DA
DA
DA
4
4
4
N
1
-6.53
0.80
105.90
99.37
A
A
A
O4'
C1'
C2'
DA
DA
DA
4
4
4
N
1
6.68
0.30
108.30
114.98
A
A
A
O4'
C1'
N9
DA
DA
DA
4
4
4
N
1
-6.06
0.80
102.40
96.34
A
A
A
C3'
C2'
C1'
DA
DA
DA
5
5
5
N
1
4.95
0.60
118.60
123.55
A
A
A
N1
C6
N6
DA
DA
DA
5
5
5
N
1
3.69
0.60
118.00
121.69
A
A
A
C4
C5
C6
DT
DT
DT
7
7
7
N
1
-3.82
0.60
122.90
119.08
A
A
A
C6
C5
C7
DT
DT
DT
7
7
7
N
1
-5.47
0.80
102.40
96.93
A
A
A
C3'
C2'
C1'
DT
DT
DT
8
8
8
N
1
3.96
0.60
118.00
121.96
A
A
A
C4
C5
C6
DT
DT
DT
8
8
8
N
1
-5.80
0.60
122.90
117.10
A
A
A
C6
C5
C7
DT
DT
DT
8
8
8
N
1
-2.54
0.40
104.50
101.96
A
A
A
O4'
C4'
C3'
DT
DT
DT
9
9
9
N
1
-10.31
0.80
102.40
92.09
A
A
A
C3'
C2'
C1'
DT
DT
DT
9
9
9
N
1
-5.05
0.80
105.90
100.85
A
A
A
O4'
C1'
C2'
DT
DT
DT
9
9
9
N
1
3.71
0.30
108.30
112.01
A
A
A
O4'
C1'
N1
DT
DT
DT
9
9
9
N
1
3.74
0.60
118.00
121.74
A
A
A
C4
C5
C6
DT
DT
DT
9
9
9
N
1
-4.16
0.60
122.90
118.74
A
A
A
C6
C5
C7
DT
DT
DT
9
9
9
N
1
-6.16
0.80
102.40
96.24
A
A
A
C3'
C2'
C1'
DC
DC
DC
10
10
10
N
1
-3.59
0.40
104.50
100.91
A
A
A
O4'
C4'
C3'
DG
DG
DG
11
11
11
N
1
-8.41
0.80
102.40
93.99
A
A
A
C3'
C2'
C1'
DG
DG
DG
11
11
11
N
1
-6.64
0.80
102.40
95.76
B
B
B
C3'
C2'
C1'
DC
DC
DC
1
1
1
N
1
-5.78
0.80
105.90
100.12
B
B
B
O4'
C1'
C2'
DC
DC
DC
1
1
1
N
1
-3.07
0.40
104.50
101.43
B
B
B
O4'
C4'
C3'
DG
DG
DG
2
2
2
N
1
-10.56
0.80
102.40
91.84
B
B
B
C3'
C2'
C1'
DG
DG
DG
2
2
2
N
1
-6.52
0.80
102.40
95.88
B
B
B
C3'
C2'
C1'
DA
DA
DA
3
3
3
N
1
4.39
0.60
118.60
122.99
B
B
B
N1
C6
N6
DA
DA
DA
3
3
3
N
1
7.54
1.20
119.70
127.24
B
B
B
C3'
O3'
P
DA
DA
DA
3
3
4
Y
1
-9.10
0.80
102.40
93.30
B
B
B
C3'
C2'
C1'
DA
DA
DA
4
4
4
N
1
3.64
0.30
108.30
111.94
B
B
B
O4'
C1'
N9
DA
DA
DA
4
4
4
N
1
-7.19
0.80
102.40
95.21
B
B
B
C3'
C2'
C1'
DA
DA
DA
5
5
5
N
1
2.12
0.30
108.30
110.42
B
B
B
O4'
C1'
N9
DA
DA
DA
5
5
5
N
1
4.70
0.60
118.60
123.30
B
B
B
N1
C6
N6
DA
DA
DA
5
5
5
N
1
-5.47
0.80
102.40
96.93
B
B
B
C3'
C2'
C1'
DT
DT
DT
7
7
7
N
1
-5.75
0.80
102.40
96.65
B
B
B
C3'
C2'
C1'
DT
DT
DT
8
8
8
N
1
-5.06
0.80
105.90
100.84
B
B
B
O4'
C1'
C2'
DT
DT
DT
8
8
8
N
1
1.90
0.30
108.30
110.20
B
B
B
O4'
C1'
N1
DT
DT
DT
8
8
8
N
1
-9.45
0.80
102.40
92.95
B
B
B
C3'
C2'
C1'
DT
DT
DT
9
9
9
N
1
4.88
0.30
108.30
113.18
B
B
B
O4'
C1'
N1
DT
DT
DT
9
9
9
N
1
-6.93
0.80
102.40
95.47
B
B
B
C3'
C2'
C1'
DC
DC
DC
10
10
10
N
1
-3.75
0.40
104.50
100.75
B
B
B
O4'
C4'
C3'
DG
DG
DG
11
11
11
N
1
-8.96
0.80
102.40
93.44
B
B
B
C3'
C2'
C1'
DG
DG
DG
11
11
11
N
5'-D(*CP*GP*AP*AP*AP*(TTM)P*TP*TP*TP*CP*G)-3'
Mispair Aligned N3T-Butyl-N3T Interstrand Crosslink
1
N
N
1
N
N
covale
1.621
A
TTM
6
A
C2Q
TTM
6
1_555
B
TTM
6
B
C2Q
TTM
6
1_555
covale
1.600
A
DA
5
A
O3'
DA
5
1_555
A
TTM
6
A
P
TTM
6
1_555
covale
1.603
A
TTM
6
A
O3'
TTM
6
1_555
A
DT
7
A
P
DT
7
1_555
covale
1.603
B
DA
5
B
O3'
DA
5
1_555
B
TTM
6
B
P
TTM
6
1_555
covale
1.602
B
TTM
6
B
O3'
TTM
6
1_555
B
DT
7
B
P
DT
7
1_555
hydrog
WATSON-CRICK
A
DC
1
A
N3
DC
1
1_555
B
DG
11
B
N1
DG
11
1_555
hydrog
WATSON-CRICK
A
DC
1
A
N4
DC
1
1_555
B
DG
11
B
O6
DG
11
1_555
hydrog
WATSON-CRICK
A
DC
1
A
O2
DC
1
1_555
B
DG
11
B
N2
DG
11
1_555
hydrog
WATSON-CRICK
A
DG
2
A
N1
DG
2
1_555
B
DC
10
B
N3
DC
10
1_555
hydrog
WATSON-CRICK
A
DG
2
A
N2
DG
2
1_555
B
DC
10
B
O2
DC
10
1_555
hydrog
WATSON-CRICK
A
DG
2
A
O6
DG
2
1_555
B
DC
10
B
N4
DC
10
1_555
hydrog
WATSON-CRICK
A
DA
3
A
N1
DA
3
1_555
B
DT
9
B
N3
DT
9
1_555
hydrog
WATSON-CRICK
A
DA
3
A
N6
DA
3
1_555
B
DT
9
B
O4
DT
9
1_555
hydrog
WATSON-CRICK
A
DA
4
A
N1
DA
4
1_555
B
DT
8
B
N3
DT
8
1_555
hydrog
WATSON-CRICK
A
DA
4
A
N6
DA
4
1_555
B
DT
8
B
O4
DT
8
1_555
hydrog
WATSON-CRICK
A
DA
5
A
N1
DA
5
1_555
B
DT
7
B
N3
DT
7
1_555
hydrog
WATSON-CRICK
A
DA
5
A
N6
DA
5
1_555
B
DT
7
B
O4
DT
7
1_555
hydrog
WATSON-CRICK
A
DT
7
A
N3
DT
7
1_555
B
DA
5
B
N1
DA
5
1_555
hydrog
WATSON-CRICK
A
DT
7
A
O4
DT
7
1_555
B
DA
5
B
N6
DA
5
1_555
hydrog
WATSON-CRICK
A
DT
8
A
N3
DT
8
1_555
B
DA
4
B
N1
DA
4
1_555
hydrog
WATSON-CRICK
A
DT
8
A
O4
DT
8
1_555
B
DA
4
B
N6
DA
4
1_555
hydrog
WATSON-CRICK
A
DT
9
A
N3
DT
9
1_555
B
DA
3
B
N1
DA
3
1_555
hydrog
WATSON-CRICK
A
DT
9
A
O4
DT
9
1_555
B
DA
3
B
N6
DA
3
1_555
hydrog
WATSON-CRICK
A
DC
10
A
N3
DC
10
1_555
B
DG
2
B
N1
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
10
A
N4
DC
10
1_555
B
DG
2
B
O6
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
10
A
O2
DC
10
1_555
B
DG
2
B
N2
DG
2
1_555
hydrog
WATSON-CRICK
A
DG
11
A
N1
DG
11
1_555
B
DC
1
B
N3
DC
1
1_555
hydrog
WATSON-CRICK
A
DG
11
A
N2
DG
11
1_555
B
DC
1
B
O2
DC
1
1_555
hydrog
WATSON-CRICK
A
DG
11
A
O6
DG
11
1_555
B
DC
1
B
N4
DC
1
1_555
DNA
interstrand cross-link, double helix, DNA
1XCI
PDB
1
1XCI
1
11
1XCI
1
11
1XCI
A
1
1
11
1
11
1XCI
1
11
1XCI
B
1
1
11