data_1XJY # _entry.id 1XJY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1XJY pdb_00001xjy 10.2210/pdb1xjy/pdb NDB AD0033 ? ? RCSB RCSB030440 ? ? WWPDB D_1000030440 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2005-03-15 2 'Structure model' 1 1 2008-04-30 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-03-13 5 'Structure model' 1 4 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1XJY _pdbx_database_status.recvd_initial_deposition_date 2004-09-26 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 1XJX _pdbx_database_related.details 'the same nucleic acid at 1.7 angstrom' _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kitayner, M.' 1 'Rozenberg, H.' 2 'Rabinovich, D.' 3 'Shakked, Z.' 4 # _citation.id primary _citation.title 'Structures of the DNA-binding site of Runt-domain transcription regulators.' _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 61 _citation.page_first 236 _citation.page_last 246 _citation.year 2005 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15735333 _citation.pdbx_database_id_DOI 10.1107/S0907444904032378 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kitayner, M.' 1 ? primary 'Rozenberg, H.' 2 ? primary 'Rabinovich, D.' 3 ? primary 'Shakked, Z.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn "5'-D(*TP*CP*TP*GP*CP*GP*GP*TP*C)-3'" 2722.784 1 ? ? ? ? 2 polymer syn "5'-D(*TP*GP*AP*CP*CP*GP*CP*AP*G)-3'" 2740.812 1 ? ? ? ? 3 water nat water 18.015 90 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DT)(DC)(DT)(DG)(DC)(DG)(DG)(DT)(DC)' TCTGCGGTC A ? 2 polydeoxyribonucleotide no no '(DT)(DG)(DA)(DC)(DC)(DG)(DC)(DA)(DG)' TGACCGCAG B ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DT n 1 2 DC n 1 3 DT n 1 4 DG n 1 5 DC n 1 6 DG n 1 7 DG n 1 8 DT n 1 9 DC n 2 1 DT n 2 2 DG n 2 3 DA n 2 4 DC n 2 5 DC n 2 6 DG n 2 7 DC n 2 8 DA n 2 9 DG n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DT 1 1 1 DT T A . n A 1 2 DC 2 2 2 DC C A . n A 1 3 DT 3 3 3 DT T A . n A 1 4 DG 4 4 4 DG G A . n A 1 5 DC 5 5 5 DC C A . n A 1 6 DG 6 6 6 DG G A . n A 1 7 DG 7 7 7 DG G A . n A 1 8 DT 8 8 8 DT T A . n A 1 9 DC 9 9 9 DC C A . n B 2 1 DT 1 10 10 DT T B . n B 2 2 DG 2 11 11 DG G B . n B 2 3 DA 3 12 12 DA A B . n B 2 4 DC 4 13 13 DC C B . n B 2 5 DC 5 14 14 DC C B . n B 2 6 DG 6 15 15 DG G B . n B 2 7 DC 7 16 16 DC C B . n B 2 8 DA 8 17 17 DA A B . n B 2 9 DG 9 18 18 DG G B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 HOH 1 20 20 HOH HOH A . C 3 HOH 2 21 21 HOH HOH A . C 3 HOH 3 23 23 HOH HOH A . C 3 HOH 4 25 25 HOH HOH A . C 3 HOH 5 27 27 HOH HOH A . C 3 HOH 6 28 28 HOH HOH A . C 3 HOH 7 29 29 HOH HOH A . C 3 HOH 8 32 32 HOH HOH A . C 3 HOH 9 33 33 HOH HOH A . C 3 HOH 10 37 37 HOH HOH A . C 3 HOH 11 40 40 HOH HOH A . C 3 HOH 12 42 42 HOH HOH A . C 3 HOH 13 43 43 HOH HOH A . C 3 HOH 14 45 45 HOH HOH A . C 3 HOH 15 46 46 HOH HOH A . C 3 HOH 16 50 50 HOH HOH A . C 3 HOH 17 51 51 HOH HOH A . C 3 HOH 18 55 55 HOH HOH A . C 3 HOH 19 57 57 HOH HOH A . C 3 HOH 20 58 58 HOH HOH A . C 3 HOH 21 61 61 HOH HOH A . C 3 HOH 22 62 62 HOH HOH A . C 3 HOH 23 63 63 HOH HOH A . C 3 HOH 24 66 66 HOH HOH A . C 3 HOH 25 69 69 HOH HOH A . C 3 HOH 26 71 71 HOH HOH A . C 3 HOH 27 72 72 HOH HOH A . C 3 HOH 28 76 76 HOH HOH A . C 3 HOH 29 77 77 HOH HOH A . C 3 HOH 30 82 82 HOH HOH A . C 3 HOH 31 83 83 HOH HOH A . C 3 HOH 32 86 86 HOH HOH A . C 3 HOH 33 88 88 HOH HOH A . C 3 HOH 34 89 89 HOH HOH A . C 3 HOH 35 90 90 HOH HOH A . C 3 HOH 36 91 91 HOH HOH A . C 3 HOH 37 92 92 HOH HOH A . C 3 HOH 38 95 95 HOH HOH A . C 3 HOH 39 96 96 HOH HOH A . C 3 HOH 40 99 99 HOH HOH A . C 3 HOH 41 101 101 HOH HOH A . C 3 HOH 42 102 102 HOH HOH A . C 3 HOH 43 103 103 HOH HOH A . C 3 HOH 44 104 104 HOH HOH A . C 3 HOH 45 106 106 HOH HOH A . D 3 HOH 1 19 19 HOH HOH B . D 3 HOH 2 22 22 HOH HOH B . D 3 HOH 3 24 24 HOH HOH B . D 3 HOH 4 26 26 HOH HOH B . D 3 HOH 5 30 30 HOH HOH B . D 3 HOH 6 31 31 HOH HOH B . D 3 HOH 7 34 34 HOH HOH B . D 3 HOH 8 35 35 HOH HOH B . D 3 HOH 9 36 36 HOH HOH B . D 3 HOH 10 38 38 HOH HOH B . D 3 HOH 11 39 39 HOH HOH B . D 3 HOH 12 41 41 HOH HOH B . D 3 HOH 13 44 44 HOH HOH B . D 3 HOH 14 47 47 HOH HOH B . D 3 HOH 15 48 48 HOH HOH B . D 3 HOH 16 49 49 HOH HOH B . D 3 HOH 17 52 52 HOH HOH B . D 3 HOH 18 53 53 HOH HOH B . D 3 HOH 19 54 54 HOH HOH B . D 3 HOH 20 56 56 HOH HOH B . D 3 HOH 21 59 59 HOH HOH B . D 3 HOH 22 60 60 HOH HOH B . D 3 HOH 23 64 64 HOH HOH B . D 3 HOH 24 65 65 HOH HOH B . D 3 HOH 25 67 67 HOH HOH B . D 3 HOH 26 68 68 HOH HOH B . D 3 HOH 27 70 70 HOH HOH B . D 3 HOH 28 73 73 HOH HOH B . D 3 HOH 29 74 74 HOH HOH B . D 3 HOH 30 75 75 HOH HOH B . D 3 HOH 31 78 78 HOH HOH B . D 3 HOH 32 79 79 HOH HOH B . D 3 HOH 33 80 80 HOH HOH B . D 3 HOH 34 81 81 HOH HOH B . D 3 HOH 35 84 84 HOH HOH B . D 3 HOH 36 85 85 HOH HOH B . D 3 HOH 37 87 87 HOH HOH B . D 3 HOH 38 93 93 HOH HOH B . D 3 HOH 39 94 94 HOH HOH B . D 3 HOH 40 97 97 HOH HOH B . D 3 HOH 41 98 98 HOH HOH B . D 3 HOH 42 100 100 HOH HOH B . D 3 HOH 43 105 105 HOH HOH B . D 3 HOH 44 107 107 HOH HOH B . D 3 HOH 45 108 108 HOH HOH B . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A DT 1 ? "O5'" ? A DT 1 "O5'" 2 1 Y 1 A DT 1 ? "C5'" ? A DT 1 "C5'" 3 1 Y 1 A DT 1 ? "C4'" ? A DT 1 "C4'" 4 1 Y 1 A DT 1 ? "O4'" ? A DT 1 "O4'" 5 1 Y 1 A DT 1 ? "C3'" ? A DT 1 "C3'" 6 1 Y 1 A DT 1 ? "C2'" ? A DT 1 "C2'" 7 1 Y 1 A DT 1 ? "C1'" ? A DT 1 "C1'" 8 1 Y 1 A DT 1 ? N1 ? A DT 1 N1 9 1 Y 1 A DT 1 ? C2 ? A DT 1 C2 10 1 Y 1 A DT 1 ? O2 ? A DT 1 O2 11 1 Y 1 A DT 1 ? N3 ? A DT 1 N3 12 1 Y 1 A DT 1 ? C4 ? A DT 1 C4 13 1 Y 1 A DT 1 ? O4 ? A DT 1 O4 14 1 Y 1 A DT 1 ? C5 ? A DT 1 C5 15 1 Y 1 A DT 1 ? C7 ? A DT 1 C7 16 1 Y 1 A DT 1 ? C6 ? A DT 1 C6 17 1 Y 1 B DT 10 ? "O5'" ? B DT 1 "O5'" 18 1 Y 1 B DT 10 ? "C5'" ? B DT 1 "C5'" 19 1 Y 1 B DT 10 ? "C4'" ? B DT 1 "C4'" 20 1 Y 1 B DT 10 ? "O4'" ? B DT 1 "O4'" 21 1 Y 1 B DT 10 ? "C3'" ? B DT 1 "C3'" 22 1 Y 1 B DT 10 ? "C2'" ? B DT 1 "C2'" 23 1 Y 1 B DT 10 ? "C1'" ? B DT 1 "C1'" 24 1 Y 1 B DT 10 ? N1 ? B DT 1 N1 25 1 Y 1 B DT 10 ? C2 ? B DT 1 C2 26 1 Y 1 B DT 10 ? O2 ? B DT 1 O2 27 1 Y 1 B DT 10 ? N3 ? B DT 1 N3 28 1 Y 1 B DT 10 ? C4 ? B DT 1 C4 29 1 Y 1 B DT 10 ? O4 ? B DT 1 O4 30 1 Y 1 B DT 10 ? C5 ? B DT 1 C5 31 1 Y 1 B DT 10 ? C7 ? B DT 1 C7 32 1 Y 1 B DT 10 ? C6 ? B DT 1 C6 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal DENZO 'data reduction' . ? 1 SCALEPACK 'data scaling' . ? 2 ULTIMA 'model building' . ? 3 SHELXL-97 refinement . ? 4 ULTIMA phasing . ? 5 # _cell.entry_id 1XJY _cell.length_a 42.295 _cell.length_b 42.295 _cell.length_c 24.333 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XJY _symmetry.space_group_name_H-M 'P 43' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1XJY _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.99 _exptl_crystal.density_percent_sol 38.24 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details 'pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV++' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details 'OSMIC CONFOCAL MIRROR' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.54 1.0 2 1.5418 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RUH3R' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.54 _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 1XJY _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 19.0 _reflns.d_resolution_high 2.0 _reflns.number_obs 2975 _reflns.number_all ? _reflns.percent_possible_obs 100 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.042 _reflns.pdbx_netI_over_sigmaI 52.4 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.1 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 2.00 _reflns_shell.d_res_low 2.03 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.261 _reflns_shell.meanI_over_sigI_obs 8.9 _reflns_shell.pdbx_redundancy 6.6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id ? _reflns_shell.pdbx_ordinal 1 # _refine.entry_id 1XJY _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all 2931 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 15.00 _refine.ls_d_res_high 2.00 _refine.ls_percent_reflns_obs 97.2 _refine.ls_R_factor_obs 0.1418 _refine.ls_R_factor_all 0.1418 _refine.ls_R_factor_R_work 0.1407 _refine.ls_R_factor_R_free 0.1884 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 146 _refine.ls_number_parameters 1696 _refine.ls_number_restraints 5755 _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'ANISOTROPIC SCALING APPLIED BY THE METHOD OF PARKIN, MOEZZI & HOPE, J.APPL.CRYST.28(1995)53-56' _refine.pdbx_starting_model 'FIBER A-DNA' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ;L.CLOWNEY ET AL.,J.AM.CHEM.SOC.118(1996)509-518, A.GELBIN ET AL.,J.AM.CHEM.SOC.118(1996)519-529, G.PARKINSON ET AL.,ACTA CRYST.D52(1996)57-64 ; _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 1XJY _refine_analyze.Luzzati_coordinate_error_obs ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues 0 _refine_analyze.occupancy_sum_hydrogen 0.00 _refine_analyze.occupancy_sum_non_hydrogen 420.00 _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 330 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 90 _refine_hist.number_atoms_total 420 _refine_hist.d_res_high 2.00 _refine_hist.d_res_low 15.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function s_bond_d 0.007 ? ? ? 'X-RAY DIFFRACTION' ? s_angle_d 0.024 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_dist 0.021 ? ? ? 'X-RAY DIFFRACTION' ? s_from_restr_planes 0.0005 ? ? ? 'X-RAY DIFFRACTION' ? s_zero_chiral_vol 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_non_zero_chiral_vol 0.006 ? ? ? 'X-RAY DIFFRACTION' ? s_anti_bump_dis_restr 0.007 ? ? ? 'X-RAY DIFFRACTION' ? s_rigid_bond_adp_cmpnt 0.000 ? ? ? 'X-RAY DIFFRACTION' ? s_similar_adp_cmpnt 0.112 ? ? ? 'X-RAY DIFFRACTION' ? s_approx_iso_adps 0.000 ? ? ? 'X-RAY DIFFRACTION' ? # _pdbx_refine.entry_id 1XJY _pdbx_refine.R_factor_all_no_cutoff 0.1418 _pdbx_refine.R_factor_obs_no_cutoff 0.1407 _pdbx_refine.free_R_factor_no_cutoff 0.1884 _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff 5.0 _pdbx_refine.free_R_val_test_set_ct_no_cutoff 146 _pdbx_refine.R_factor_all_4sig_cutoff 0.1383 _pdbx_refine.R_factor_obs_4sig_cutoff 0.1372 _pdbx_refine.free_R_factor_4sig_cutoff 0.1833 _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff 4.8 _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff 133 _pdbx_refine.number_reflns_obs_4sig_cutoff 2758 _pdbx_refine.number_reflns_obs_no_cutoff ? _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.free_R_error_no_cutoff ? # _database_PDB_matrix.entry_id 1XJY _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.000000 _database_PDB_matrix.origx_vector[2] 0.000000 _database_PDB_matrix.origx_vector[3] 0.000000 # _struct.entry_id 1XJY _struct.title 'The crystal structures of the DNA binding sites of the RUNX1 transcription factor' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1XJY _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'A-DNA, DOUBLE HELIX, OVERHANGING BASES, RUNX1, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? # loop_ _struct_ref.id _struct_ref.entity_id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 1 PDB 1XJY 1XJY ? ? ? 2 2 PDB 1XJY 1XJY ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1XJY A 1 ? 9 ? 1XJY 1 ? 9 ? 1 9 2 2 1XJY B 1 ? 9 ? 1XJY 10 ? 18 ? 10 18 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 9 N1 ? ? A DC 2 B DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 9 O6 ? ? A DC 2 B DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 9 N2 ? ? A DC 2 B DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B DA 8 N1 ? ? A DT 3 B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B DA 8 N6 ? ? A DT 3 B DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC 7 N3 ? ? A DG 4 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC 7 O2 ? ? A DG 4 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC 7 N4 ? ? A DG 4 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG 6 N1 ? ? A DC 5 B DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG 6 O6 ? ? A DC 5 B DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG 6 N2 ? ? A DC 5 B DG 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC 5 N3 ? ? A DG 6 B DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC 5 O2 ? ? A DG 6 B DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC 5 N4 ? ? A DG 6 B DC 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 7 N1 ? ? ? 1_555 B DC 4 N3 ? ? A DG 7 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 7 N2 ? ? ? 1_555 B DC 4 O2 ? ? A DG 7 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DG 7 O6 ? ? ? 1_555 B DC 4 N4 ? ? A DG 7 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DT 8 N3 ? ? ? 1_555 B DA 3 N1 ? ? A DT 8 B DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DT 8 O4 ? ? ? 1_555 B DA 3 N6 ? ? A DT 8 B DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 9 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 9 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DC 9 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 9 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DC 9 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 9 B DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" A DC 2 ? ? "O3'" A DC 2 ? ? P A DT 3 ? ? 127.04 119.70 7.34 1.20 Y 2 1 "C3'" A DT 3 ? ? "O3'" A DT 3 ? ? P A DG 4 ? ? 127.53 119.70 7.83 1.20 Y 3 1 N1 A DC 5 ? ? C2 A DC 5 ? ? O2 A DC 5 ? ? 113.31 118.90 -5.59 0.60 N 4 1 N3 A DC 5 ? ? C2 A DC 5 ? ? O2 A DC 5 ? ? 126.49 121.90 4.59 0.70 N 5 1 C6 B DC 13 ? ? N1 B DC 13 ? ? C2 B DC 13 ? ? 124.04 120.30 3.74 0.40 N 6 1 N3 B DC 13 ? ? C2 B DC 13 ? ? O2 B DC 13 ? ? 127.12 121.90 5.22 0.70 N 7 1 C2 B DC 13 ? ? N1 B DC 13 ? ? "C1'" B DC 13 ? ? 112.02 118.80 -6.78 1.10 N 8 1 "C3'" B DC 13 ? ? "O3'" B DC 13 ? ? P B DC 14 ? ? 134.19 119.70 14.49 1.20 Y 9 1 "O4'" B DG 15 ? ? "C1'" B DG 15 ? ? N9 B DG 15 ? ? 110.14 108.30 1.84 0.30 N 10 1 C6 B DC 16 ? ? N1 B DC 16 ? ? C2 B DC 16 ? ? 122.73 120.30 2.43 0.40 N 11 1 N1 B DG 18 ? ? C6 B DG 18 ? ? O6 B DG 18 ? ? 123.91 119.90 4.01 0.60 N # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 # _ndb_struct_conf_na.entry_id 1XJY _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DC 2 1_555 B DG 9 1_555 -0.505 -0.387 0.077 -13.094 -11.574 -4.761 1 A_DC2:DG18_B A 2 ? B 18 ? 19 1 1 A DT 3 1_555 B DA 8 1_555 -0.530 -0.232 0.388 2.555 -8.620 5.148 2 A_DT3:DA17_B A 3 ? B 17 ? 20 1 1 A DG 4 1_555 B DC 7 1_555 -0.124 -0.408 -0.204 -7.557 -16.261 -3.088 3 A_DG4:DC16_B A 4 ? B 16 ? 19 1 1 A DC 5 1_555 B DG 6 1_555 0.082 -0.106 0.359 -0.581 -6.419 -0.508 4 A_DC5:DG15_B A 5 ? B 15 ? 19 1 1 A DG 6 1_555 B DC 5 1_555 -0.124 -0.379 -0.142 4.201 -4.869 -1.449 5 A_DG6:DC14_B A 6 ? B 14 ? 19 1 1 A DG 7 1_555 B DC 4 1_555 -0.143 -0.290 -0.277 -12.342 -12.712 -0.871 6 A_DG7:DC13_B A 7 ? B 13 ? 19 1 1 A DT 8 1_555 B DA 3 1_555 -0.010 -0.079 -0.015 -2.863 -17.561 5.900 7 A_DT8:DA12_B A 8 ? B 12 ? 20 1 1 A DC 9 1_555 B DG 2 1_555 1.116 -0.621 -0.216 10.997 -10.132 -5.736 8 A_DC9:DG11_B A 9 ? B 11 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DC 2 1_555 B DG 9 1_555 A DT 3 1_555 B DA 8 1_555 1.111 -1.105 3.019 -3.019 6.108 33.253 -2.755 -2.330 2.671 10.536 5.208 33.925 1 AA_DC2DT3:DA17DG18_BB A 2 ? B 18 ? A 3 ? B 17 ? 1 A DT 3 1_555 B DA 8 1_555 A DG 4 1_555 B DC 7 1_555 -0.331 -1.366 3.365 3.859 15.534 34.044 -4.035 0.989 2.482 24.898 -6.184 37.518 2 AA_DT3DG4:DC16DA17_BB A 3 ? B 17 ? A 4 ? B 16 ? 1 A DG 4 1_555 B DC 7 1_555 A DC 5 1_555 B DG 6 1_555 0.306 -1.550 3.066 -4.668 0.569 36.398 -2.534 -1.080 2.981 0.906 7.434 36.690 3 AA_DG4DC5:DG15DC16_BB A 4 ? B 16 ? A 5 ? B 15 ? 1 A DC 5 1_555 B DG 6 1_555 A DG 6 1_555 B DC 5 1_555 -0.215 -2.078 3.153 1.913 4.890 20.584 -7.434 1.287 2.565 13.405 -5.245 21.236 4 AA_DC5DG6:DC14DG15_BB A 5 ? B 15 ? A 6 ? B 14 ? 1 A DG 6 1_555 B DC 5 1_555 A DG 7 1_555 B DC 4 1_555 -0.337 -1.512 3.829 -0.499 5.399 36.549 -3.217 0.456 3.581 8.551 0.791 36.936 5 AA_DG6DG7:DC13DC14_BB A 6 ? B 14 ? A 7 ? B 13 ? 1 A DG 7 1_555 B DC 4 1_555 A DT 8 1_555 B DA 3 1_555 0.203 -1.028 3.002 -2.703 8.273 32.156 -3.007 -0.750 2.638 14.604 4.772 33.283 6 AA_DG7DT8:DA12DC13_BB A 7 ? B 13 ? A 8 ? B 12 ? 1 A DT 8 1_555 B DA 3 1_555 A DC 9 1_555 B DG 2 1_555 -0.674 -1.072 2.897 -1.238 8.677 35.022 -2.779 0.939 2.588 14.147 2.018 36.069 7 AA_DT8DC9:DG11DA12_BB A 8 ? B 12 ? A 9 ? B 11 ? # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type other _pdbx_initial_refinement_model.source_name ? _pdbx_initial_refinement_model.details 'FIBER A-DNA' # _atom_sites.entry_id 1XJY _atom_sites.fract_transf_matrix[1][1] 0.023643 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023643 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.041096 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O3'" . DT A 1 1 ? -22.575 36.121 -8.088 1.00 32.95 ? 1 DT A "O3'" 1 ATOM 2 P P . DC A 1 2 ? -22.638 35.965 -6.504 1.00 53.64 ? 2 DC A P 1 ATOM 3 O OP1 . DC A 1 2 ? -22.991 37.300 -5.975 1.00 52.47 ? 2 DC A OP1 1 ATOM 4 O OP2 . DC A 1 2 ? -21.360 35.373 -6.071 1.00 39.98 ? 2 DC A OP2 1 ATOM 5 O "O5'" . DC A 1 2 ? -23.817 34.937 -6.291 1.00 31.20 ? 2 DC A "O5'" 1 ATOM 6 C "C5'" . DC A 1 2 ? -24.932 35.148 -5.423 1.00 29.23 ? 2 DC A "C5'" 1 ATOM 7 C "C4'" . DC A 1 2 ? -25.364 33.812 -4.859 1.00 25.82 ? 2 DC A "C4'" 1 ATOM 8 O "O4'" . DC A 1 2 ? -25.075 32.745 -5.818 1.00 33.12 ? 2 DC A "O4'" 1 ATOM 9 C "C3'" . DC A 1 2 ? -24.673 33.328 -3.598 1.00 31.88 ? 2 DC A "C3'" 1 ATOM 10 O "O3'" . DC A 1 2 ? -25.094 34.012 -2.446 1.00 51.59 ? 2 DC A "O3'" 1 ATOM 11 C "C2'" . DC A 1 2 ? -25.094 31.861 -3.604 1.00 31.15 ? 2 DC A "C2'" 1 ATOM 12 C "C1'" . DC A 1 2 ? -24.923 31.541 -5.081 1.00 33.56 ? 2 DC A "C1'" 1 ATOM 13 N N1 . DC A 1 2 ? -23.583 30.957 -5.410 1.00 29.98 ? 2 DC A N1 1 ATOM 14 C C2 . DC A 1 2 ? -23.303 29.668 -4.967 1.00 41.58 ? 2 DC A C2 1 ATOM 15 O O2 . DC A 1 2 ? -24.124 29.000 -4.317 1.00 50.98 ? 2 DC A O2 1 ATOM 16 N N3 . DC A 1 2 ? -22.087 29.149 -5.273 1.00 40.06 ? 2 DC A N3 1 ATOM 17 C C4 . DC A 1 2 ? -21.175 29.832 -5.970 1.00 34.84 ? 2 DC A C4 1 ATOM 18 N N4 . DC A 1 2 ? -20.013 29.234 -6.215 1.00 33.77 ? 2 DC A N4 1 ATOM 19 C C5 . DC A 1 2 ? -21.455 31.159 -6.428 1.00 34.47 ? 2 DC A C5 1 ATOM 20 C C6 . DC A 1 2 ? -22.677 31.679 -6.121 1.00 29.51 ? 2 DC A C6 1 ATOM 21 P P . DT A 1 3 ? -24.169 34.568 -1.261 1.00 49.73 ? 3 DT A P 1 ATOM 22 O OP1 . DT A 1 3 ? -25.019 35.411 -0.405 1.00 57.72 ? 3 DT A OP1 1 ATOM 23 O OP2 . DT A 1 3 ? -23.005 35.211 -1.908 1.00 38.27 ? 3 DT A OP2 1 ATOM 24 O "O5'" . DT A 1 3 ? -23.738 33.235 -0.518 1.00 34.58 ? 3 DT A "O5'" 1 ATOM 25 C "C5'" . DT A 1 3 ? -24.641 32.533 0.346 1.00 37.77 ? 3 DT A "C5'" 1 ATOM 26 C "C4'" . DT A 1 3 ? -24.187 31.108 0.555 1.00 36.81 ? 3 DT A "C4'" 1 ATOM 27 O "O4'" . DT A 1 3 ? -23.862 30.498 -0.730 1.00 39.88 ? 3 DT A "O4'" 1 ATOM 28 C "C3'" . DT A 1 3 ? -22.922 30.889 1.362 1.00 45.41 ? 3 DT A "C3'" 1 ATOM 29 O "O3'" . DT A 1 3 ? -23.127 31.029 2.744 1.00 44.06 ? 3 DT A "O3'" 1 ATOM 30 C "C2'" . DT A 1 3 ? -22.573 29.457 0.980 1.00 43.54 ? 3 DT A "C2'" 1 ATOM 31 C "C1'" . DT A 1 3 ? -22.912 29.470 -0.502 1.00 36.26 ? 3 DT A "C1'" 1 ATOM 32 N N1 . DT A 1 3 ? -21.726 29.729 -1.373 1.00 34.93 ? 3 DT A N1 1 ATOM 33 C C2 . DT A 1 3 ? -20.823 28.721 -1.561 1.00 35.65 ? 3 DT A C2 1 ATOM 34 O O2 . DT A 1 3 ? -20.926 27.610 -1.057 1.00 43.07 ? 3 DT A O2 1 ATOM 35 N N3 . DT A 1 3 ? -19.765 29.059 -2.384 1.00 37.63 ? 3 DT A N3 1 ATOM 36 C C4 . DT A 1 3 ? -19.532 30.260 -3.008 1.00 36.83 ? 3 DT A C4 1 ATOM 37 O O4 . DT A 1 3 ? -18.543 30.447 -3.723 1.00 47.69 ? 3 DT A O4 1 ATOM 38 C C5 . DT A 1 3 ? -20.542 31.253 -2.745 1.00 30.50 ? 3 DT A C5 1 ATOM 39 C C7 . DT A 1 3 ? -20.366 32.598 -3.390 1.00 26.43 ? 3 DT A C7 1 ATOM 40 C C6 . DT A 1 3 ? -21.576 30.961 -1.957 1.00 31.21 ? 3 DT A C6 1 ATOM 41 P P . DG A 1 4 ? -22.138 31.659 3.806 1.00 41.56 ? 4 DG A P 1 ATOM 42 O OP1 . DG A 1 4 ? -22.894 31.911 5.047 1.00 67.08 ? 4 DG A OP1 1 ATOM 43 O OP2 . DG A 1 4 ? -21.499 32.833 3.164 1.00 39.32 ? 4 DG A OP2 1 ATOM 44 O "O5'" . DG A 1 4 ? -21.070 30.497 4.036 1.00 30.86 ? 4 DG A "O5'" 1 ATOM 45 C "C5'" . DG A 1 4 ? -21.521 29.190 4.421 1.00 36.60 ? 4 DG A "C5'" 1 ATOM 46 C "C4'" . DG A 1 4 ? -20.407 28.183 4.245 1.00 44.80 ? 4 DG A "C4'" 1 ATOM 47 O "O4'" . DG A 1 4 ? -20.246 27.876 2.829 1.00 50.80 ? 4 DG A "O4'" 1 ATOM 48 C "C3'" . DG A 1 4 ? -19.025 28.617 4.690 1.00 44.67 ? 4 DG A "C3'" 1 ATOM 49 O "O3'" . DG A 1 4 ? -18.867 28.459 6.081 1.00 41.52 ? 4 DG A "O3'" 1 ATOM 50 C "C2'" . DG A 1 4 ? -18.125 27.689 3.899 1.00 44.46 ? 4 DG A "C2'" 1 ATOM 51 C "C1'" . DG A 1 4 ? -18.894 27.545 2.600 1.00 44.85 ? 4 DG A "C1'" 1 ATOM 52 N N9 . DG A 1 4 ? -18.376 28.452 1.533 1.00 39.57 ? 4 DG A N9 1 ATOM 53 C C8 . DG A 1 4 ? -18.802 29.684 1.086 1.00 43.35 ? 4 DG A C8 1 ATOM 54 N N7 . DG A 1 4 ? -18.073 30.177 0.108 1.00 38.30 ? 4 DG A N7 1 ATOM 55 C C5 . DG A 1 4 ? -17.105 29.196 -0.096 1.00 31.87 ? 4 DG A C5 1 ATOM 56 C C6 . DG A 1 4 ? -16.029 29.137 -1.011 1.00 28.72 ? 4 DG A C6 1 ATOM 57 O O6 . DG A 1 4 ? -15.711 29.971 -1.853 1.00 53.44 ? 4 DG A O6 1 ATOM 58 N N1 . DG A 1 4 ? -15.305 27.953 -0.862 1.00 33.36 ? 4 DG A N1 1 ATOM 59 C C2 . DG A 1 4 ? -15.545 26.931 0.037 1.00 41.22 ? 4 DG A C2 1 ATOM 60 N N2 . DG A 1 4 ? -14.708 25.894 -0.012 1.00 34.78 ? 4 DG A N2 1 ATOM 61 N N3 . DG A 1 4 ? -16.558 26.983 0.902 1.00 40.39 ? 4 DG A N3 1 ATOM 62 C C4 . DG A 1 4 ? -17.276 28.134 0.769 1.00 38.17 ? 4 DG A C4 1 ATOM 63 P P . DC A 1 5 ? -17.565 29.012 6.779 1.00 47.67 ? 5 DC A P 1 ATOM 64 O OP1 . DC A 1 5 ? -17.592 28.562 8.190 1.00 67.94 ? 5 DC A OP1 1 ATOM 65 O OP2 . DC A 1 5 ? -17.560 30.473 6.557 1.00 32.05 ? 5 DC A OP2 1 ATOM 66 O "O5'" . DC A 1 5 ? -16.354 28.322 6.013 1.00 29.25 ? 5 DC A "O5'" 1 ATOM 67 C "C5'" . DC A 1 5 ? -16.007 26.962 6.315 1.00 29.94 ? 5 DC A "C5'" 1 ATOM 68 C "C4'" . DC A 1 5 ? -14.723 26.582 5.617 1.00 42.90 ? 5 DC A "C4'" 1 ATOM 69 O "O4'" . DC A 1 5 ? -14.851 26.683 4.175 1.00 51.01 ? 5 DC A "O4'" 1 ATOM 70 C "C3'" . DC A 1 5 ? -13.533 27.472 5.941 1.00 51.17 ? 5 DC A "C3'" 1 ATOM 71 O "O3'" . DC A 1 5 ? -13.019 27.117 7.205 1.00 62.84 ? 5 DC A "O3'" 1 ATOM 72 C "C2'" . DC A 1 5 ? -12.602 27.189 4.783 1.00 43.10 ? 5 DC A "C2'" 1 ATOM 73 C "C1'" . DC A 1 5 ? -13.592 27.051 3.635 1.00 45.70 ? 5 DC A "C1'" 1 ATOM 74 N N1 . DC A 1 5 ? -13.832 28.297 2.845 1.00 32.85 ? 5 DC A N1 1 ATOM 75 C C2 . DC A 1 5 ? -12.955 28.550 1.792 1.00 37.50 ? 5 DC A C2 1 ATOM 76 O O2 . DC A 1 5 ? -12.083 27.684 1.663 1.00 30.53 ? 5 DC A O2 1 ATOM 77 N N3 . DC A 1 5 ? -13.110 29.666 1.023 1.00 26.60 ? 5 DC A N3 1 ATOM 78 C C4 . DC A 1 5 ? -14.122 30.504 1.306 1.00 27.33 ? 5 DC A C4 1 ATOM 79 N N4 . DC A 1 5 ? -14.304 31.598 0.584 1.00 32.85 ? 5 DC A N4 1 ATOM 80 C C5 . DC A 1 5 ? -15.034 30.265 2.385 1.00 32.65 ? 5 DC A C5 1 ATOM 81 C C6 . DC A 1 5 ? -14.852 29.146 3.127 1.00 33.57 ? 5 DC A C6 1 ATOM 82 P P . DG A 1 6 ? -11.861 27.988 7.853 1.00 46.31 ? 6 DG A P 1 ATOM 83 O OP1 . DG A 1 6 ? -11.602 27.440 9.198 1.00 59.38 ? 6 DG A OP1 1 ATOM 84 O OP2 . DG A 1 6 ? -12.244 29.405 7.750 1.00 31.53 ? 6 DG A OP2 1 ATOM 85 O "O5'" . DG A 1 6 ? -10.660 27.675 6.862 1.00 32.02 ? 6 DG A "O5'" 1 ATOM 86 C "C5'" . DG A 1 6 ? -9.516 28.539 6.875 1.00 35.66 ? 6 DG A "C5'" 1 ATOM 87 C "C4'" . DG A 1 6 ? -8.743 28.320 5.593 1.00 28.94 ? 6 DG A "C4'" 1 ATOM 88 O "O4'" . DG A 1 6 ? -9.605 28.502 4.443 1.00 36.41 ? 6 DG A "O4'" 1 ATOM 89 C "C3'" . DG A 1 6 ? -7.595 29.285 5.364 1.00 38.32 ? 6 DG A "C3'" 1 ATOM 90 O "O3'" . DG A 1 6 ? -6.464 28.841 6.082 1.00 35.10 ? 6 DG A "O3'" 1 ATOM 91 C "C2'" . DG A 1 6 ? -7.413 29.253 3.864 1.00 31.69 ? 6 DG A "C2'" 1 ATOM 92 C "C1'" . DG A 1 6 ? -8.811 28.940 3.357 1.00 37.28 ? 6 DG A "C1'" 1 ATOM 93 N N9 . DG A 1 6 ? -9.527 30.113 2.758 1.00 24.10 ? 6 DG A N9 1 ATOM 94 C C8 . DG A 1 6 ? -10.667 30.722 3.237 1.00 30.86 ? 6 DG A C8 1 ATOM 95 N N7 . DG A 1 6 ? -11.081 31.730 2.514 1.00 34.59 ? 6 DG A N7 1 ATOM 96 C C5 . DG A 1 6 ? -10.133 31.779 1.481 1.00 31.58 ? 6 DG A C5 1 ATOM 97 C C6 . DG A 1 6 ? -10.072 32.678 0.394 1.00 31.75 ? 6 DG A C6 1 ATOM 98 O O6 . DG A 1 6 ? -10.836 33.607 0.122 1.00 23.99 ? 6 DG A O6 1 ATOM 99 N N1 . DG A 1 6 ? -8.969 32.379 -0.403 1.00 23.76 ? 6 DG A N1 1 ATOM 100 C C2 . DG A 1 6 ? -8.055 31.380 -0.205 1.00 24.88 ? 6 DG A C2 1 ATOM 101 N N2 . DG A 1 6 ? -7.096 31.328 -1.134 1.00 27.03 ? 6 DG A N2 1 ATOM 102 N N3 . DG A 1 6 ? -8.103 30.527 0.819 1.00 33.26 ? 6 DG A N3 1 ATOM 103 C C4 . DG A 1 6 ? -9.180 30.800 1.617 1.00 35.02 ? 6 DG A C4 1 ATOM 104 P P . DG A 1 7 ? -5.465 29.988 6.578 1.00 37.97 ? 7 DG A P 1 ATOM 105 O OP1 . DG A 1 7 ? -4.432 29.285 7.367 1.00 35.24 ? 7 DG A OP1 1 ATOM 106 O OP2 . DG A 1 7 ? -6.291 30.991 7.255 1.00 29.15 ? 7 DG A OP2 1 ATOM 107 O "O5'" . DG A 1 7 ? -4.836 30.531 5.220 1.00 28.67 ? 7 DG A "O5'" 1 ATOM 108 C "C5'" . DG A 1 7 ? -4.118 29.540 4.438 1.00 31.62 ? 7 DG A "C5'" 1 ATOM 109 C "C4'" . DG A 1 7 ? -3.395 30.224 3.296 1.00 36.30 ? 7 DG A "C4'" 1 ATOM 110 O "O4'" . DG A 1 7 ? -4.349 30.439 2.215 1.00 33.66 ? 7 DG A "O4'" 1 ATOM 111 C "C3'" . DG A 1 7 ? -2.800 31.590 3.576 1.00 45.92 ? 7 DG A "C3'" 1 ATOM 112 O "O3'" . DG A 1 7 ? -1.499 31.514 4.120 1.00 38.15 ? 7 DG A "O3'" 1 ATOM 113 C "C2'" . DG A 1 7 ? -2.794 32.235 2.197 1.00 41.94 ? 7 DG A "C2'" 1 ATOM 114 C "C1'" . DG A 1 7 ? -4.102 31.703 1.631 1.00 32.96 ? 7 DG A "C1'" 1 ATOM 115 N N9 . DG A 1 7 ? -5.289 32.570 1.914 1.00 28.62 ? 7 DG A N9 1 ATOM 116 C C8 . DG A 1 7 ? -6.264 32.466 2.883 1.00 29.17 ? 7 DG A C8 1 ATOM 117 N N7 . DG A 1 7 ? -7.181 33.418 2.846 1.00 29.86 ? 7 DG A N7 1 ATOM 118 C C5 . DG A 1 7 ? -6.760 34.199 1.763 1.00 28.46 ? 7 DG A C5 1 ATOM 119 C C6 . DG A 1 7 ? -7.344 35.370 1.232 1.00 32.37 ? 7 DG A C6 1 ATOM 120 O O6 . DG A 1 7 ? -8.362 35.930 1.641 1.00 35.55 ? 7 DG A O6 1 ATOM 121 N N1 . DG A 1 7 ? -6.611 35.851 0.141 1.00 34.41 ? 7 DG A N1 1 ATOM 122 C C2 . DG A 1 7 ? -5.460 35.274 -0.371 1.00 37.66 ? 7 DG A C2 1 ATOM 123 N N2 . DG A 1 7 ? -4.920 35.895 -1.415 1.00 28.01 ? 7 DG A N2 1 ATOM 124 N N3 . DG A 1 7 ? -4.899 34.168 0.124 1.00 35.61 ? 7 DG A N3 1 ATOM 125 C C4 . DG A 1 7 ? -5.613 33.695 1.190 1.00 26.14 ? 7 DG A C4 1 ATOM 126 P P . DT A 1 8 ? -0.735 32.660 4.919 1.00 43.38 ? 8 DT A P 1 ATOM 127 O OP1 . DT A 1 8 ? 0.602 32.133 5.243 1.00 25.40 ? 8 DT A OP1 1 ATOM 128 O OP2 . DT A 1 8 ? -1.611 33.075 6.042 1.00 35.35 ? 8 DT A OP2 1 ATOM 129 O "O5'" . DT A 1 8 ? -0.605 33.852 3.883 1.00 46.20 ? 8 DT A "O5'" 1 ATOM 130 C "C5'" . DT A 1 8 ? 0.329 33.765 2.787 1.00 31.10 ? 8 DT A "C5'" 1 ATOM 131 C "C4'" . DT A 1 8 ? 0.095 34.998 1.943 1.00 31.86 ? 8 DT A "C4'" 1 ATOM 132 O "O4'" . DT A 1 8 ? -1.249 34.978 1.392 1.00 29.65 ? 8 DT A "O4'" 1 ATOM 133 C "C3'" . DT A 1 8 ? 0.159 36.331 2.669 1.00 30.19 ? 8 DT A "C3'" 1 ATOM 134 O "O3'" . DT A 1 8 ? 1.494 36.669 2.958 1.00 48.55 ? 8 DT A "O3'" 1 ATOM 135 C "C2'" . DT A 1 8 ? -0.527 37.232 1.658 1.00 28.89 ? 8 DT A "C2'" 1 ATOM 136 C "C1'" . DT A 1 8 ? -1.656 36.323 1.194 1.00 25.40 ? 8 DT A "C1'" 1 ATOM 137 N N1 . DT A 1 8 ? -2.926 36.504 1.944 1.00 37.10 ? 8 DT A N1 1 ATOM 138 C C2 . DT A 1 8 ? -3.781 37.501 1.554 1.00 36.88 ? 8 DT A C2 1 ATOM 139 O O2 . DT A 1 8 ? -3.581 38.265 0.624 1.00 35.30 ? 8 DT A O2 1 ATOM 140 N N3 . DT A 1 8 ? -4.933 37.601 2.297 1.00 34.16 ? 8 DT A N3 1 ATOM 141 C C4 . DT A 1 8 ? -5.277 36.805 3.363 1.00 42.37 ? 8 DT A C4 1 ATOM 142 O O4 . DT A 1 8 ? -6.337 36.989 3.956 1.00 62.46 ? 8 DT A O4 1 ATOM 143 C C5 . DT A 1 8 ? -4.315 35.787 3.696 1.00 36.83 ? 8 DT A C5 1 ATOM 144 C C7 . DT A 1 8 ? -4.639 34.890 4.853 1.00 46.93 ? 8 DT A C7 1 ATOM 145 C C6 . DT A 1 8 ? -3.189 35.666 2.993 1.00 36.34 ? 8 DT A C6 1 ATOM 146 P P . DC A 1 9 ? 1.877 38.088 3.572 1.00 46.21 ? 9 DC A P 1 ATOM 147 O OP1 . DC A 1 9 ? 3.326 38.080 3.828 1.00 56.73 ? 9 DC A OP1 1 ATOM 148 O OP2 . DC A 1 9 ? 0.969 38.340 4.709 1.00 42.27 ? 9 DC A OP2 1 ATOM 149 O "O5'" . DC A 1 9 ? 1.514 39.011 2.337 1.00 41.07 ? 9 DC A "O5'" 1 ATOM 150 C "C5'" . DC A 1 9 ? 2.143 40.245 1.986 1.00 53.82 ? 9 DC A "C5'" 1 ATOM 151 C "C4'" . DC A 1 9 ? 1.044 41.288 1.885 1.00 55.33 ? 9 DC A "C4'" 1 ATOM 152 O "O4'" . DC A 1 9 ? -0.258 40.644 1.868 1.00 56.83 ? 9 DC A "O4'" 1 ATOM 153 C "C3'" . DC A 1 9 ? 0.975 42.266 3.038 1.00 44.10 ? 9 DC A "C3'" 1 ATOM 154 O "O3'" . DC A 1 9 ? 1.860 43.342 2.785 1.00 48.88 ? 9 DC A "O3'" 1 ATOM 155 C "C2'" . DC A 1 9 ? -0.475 42.686 3.076 1.00 53.38 ? 9 DC A "C2'" 1 ATOM 156 C "C1'" . DC A 1 9 ? -1.207 41.602 2.308 1.00 56.95 ? 9 DC A "C1'" 1 ATOM 157 N N1 . DC A 1 9 ? -2.253 40.905 3.131 1.00 54.10 ? 9 DC A N1 1 ATOM 158 C C2 . DC A 1 9 ? -3.535 41.457 3.082 1.00 48.36 ? 9 DC A C2 1 ATOM 159 O O2 . DC A 1 9 ? -3.672 42.462 2.368 1.00 35.10 ? 9 DC A O2 1 ATOM 160 N N3 . DC A 1 9 ? -4.535 40.884 3.800 1.00 53.21 ? 9 DC A N3 1 ATOM 161 C C4 . DC A 1 9 ? -4.312 39.793 4.554 1.00 61.81 ? 9 DC A C4 1 ATOM 162 N N4 . DC A 1 9 ? -5.313 39.248 5.250 1.00 23.13 ? 9 DC A N4 1 ATOM 163 C C5 . DC A 1 9 ? -2.997 39.211 4.615 1.00 62.66 ? 9 DC A C5 1 ATOM 164 C C6 . DC A 1 9 ? -2.015 39.805 3.888 1.00 61.93 ? 9 DC A C6 1 ATOM 165 O "O3'" . DT B 2 1 ? -14.108 42.492 5.888 1.00 68.42 ? 10 DT B "O3'" 1 ATOM 166 P P . DG B 2 2 ? -14.701 43.963 5.838 1.00 40.29 ? 11 DG B P 1 ATOM 167 O OP1 . DG B 2 2 ? -14.350 44.636 7.104 1.00 47.32 ? 11 DG B OP1 1 ATOM 168 O OP2 . DG B 2 2 ? -16.147 43.830 5.543 1.00 54.21 ? 11 DG B OP2 1 ATOM 169 O "O5'" . DG B 2 2 ? -13.944 44.620 4.603 1.00 33.79 ? 11 DG B "O5'" 1 ATOM 170 C "C5'" . DG B 2 2 ? -13.980 46.054 4.464 1.00 36.36 ? 11 DG B "C5'" 1 ATOM 171 C "C4'" . DG B 2 2 ? -12.732 46.495 3.732 1.00 30.60 ? 11 DG B "C4'" 1 ATOM 172 O "O4'" . DG B 2 2 ? -11.582 46.321 4.614 1.00 23.26 ? 11 DG B "O4'" 1 ATOM 173 C "C3'" . DG B 2 2 ? -12.354 45.727 2.486 1.00 24.09 ? 11 DG B "C3'" 1 ATOM 174 O "O3'" . DG B 2 2 ? -13.093 46.103 1.348 1.00 32.67 ? 11 DG B "O3'" 1 ATOM 175 C "C2'" . DG B 2 2 ? -10.881 46.105 2.351 1.00 33.58 ? 11 DG B "C2'" 1 ATOM 176 C "C1'" . DG B 2 2 ? -10.458 46.015 3.813 1.00 24.63 ? 11 DG B "C1'" 1 ATOM 177 N N9 . DG B 2 2 ? -9.967 44.662 4.207 1.00 25.65 ? 11 DG B N9 1 ATOM 178 C C8 . DG B 2 2 ? -10.541 43.642 4.919 1.00 24.25 ? 11 DG B C8 1 ATOM 179 N N7 . DG B 2 2 ? -9.780 42.573 5.068 1.00 27.64 ? 11 DG B N7 1 ATOM 180 C C5 . DG B 2 2 ? -8.610 42.927 4.396 1.00 26.71 ? 11 DG B C5 1 ATOM 181 C C6 . DG B 2 2 ? -7.417 42.206 4.199 1.00 30.85 ? 11 DG B C6 1 ATOM 182 O O6 . DG B 2 2 ? -7.185 41.067 4.611 1.00 64.07 ? 11 DG B O6 1 ATOM 183 N N1 . DG B 2 2 ? -6.455 42.912 3.458 1.00 19.45 ? 11 DG B N1 1 ATOM 184 C C2 . DG B 2 2 ? -6.660 44.192 2.972 1.00 35.02 ? 11 DG B C2 1 ATOM 185 N N2 . DG B 2 2 ? -5.653 44.719 2.294 1.00 35.44 ? 11 DG B N2 1 ATOM 186 N N3 . DG B 2 2 ? -7.787 44.885 3.153 1.00 28.32 ? 11 DG B N3 1 ATOM 187 C C4 . DG B 2 2 ? -8.711 44.194 3.868 1.00 33.14 ? 11 DG B C4 1 ATOM 188 P P . DA B 2 3 ? -13.474 45.022 0.245 1.00 43.03 ? 12 DA B P 1 ATOM 189 O OP1 . DA B 2 3 ? -14.492 45.659 -0.618 1.00 69.51 ? 12 DA B OP1 1 ATOM 190 O OP2 . DA B 2 3 ? -13.875 43.780 0.940 1.00 51.12 ? 12 DA B OP2 1 ATOM 191 O "O5'" . DA B 2 3 ? -12.128 44.773 -0.560 1.00 40.47 ? 12 DA B "O5'" 1 ATOM 192 C "C5'" . DA B 2 3 ? -11.391 45.859 -1.153 1.00 33.68 ? 12 DA B "C5'" 1 ATOM 193 C "C4'" . DA B 2 3 ? -10.017 45.365 -1.551 1.00 42.16 ? 12 DA B "C4'" 1 ATOM 194 O "O4'" . DA B 2 3 ? -9.253 45.012 -0.363 1.00 33.04 ? 12 DA B "O4'" 1 ATOM 195 C "C3'" . DA B 2 3 ? -9.972 44.108 -2.397 1.00 48.01 ? 12 DA B "C3'" 1 ATOM 196 O "O3'" . DA B 2 3 ? -10.248 44.375 -3.748 1.00 52.99 ? 12 DA B "O3'" 1 ATOM 197 C "C2'" . DA B 2 3 ? -8.539 43.647 -2.170 1.00 49.96 ? 12 DA B "C2'" 1 ATOM 198 C "C1'" . DA B 2 3 ? -8.383 43.953 -0.688 1.00 34.11 ? 12 DA B "C1'" 1 ATOM 199 N N9 . DA B 2 3 ? -8.746 42.809 0.186 1.00 37.77 ? 12 DA B N9 1 ATOM 200 C C8 . DA B 2 3 ? -9.955 42.495 0.734 1.00 26.14 ? 12 DA B C8 1 ATOM 201 N N7 . DA B 2 3 ? -9.915 41.416 1.452 1.00 40.85 ? 12 DA B N7 1 ATOM 202 C C5 . DA B 2 3 ? -8.589 40.998 1.360 1.00 30.31 ? 12 DA B C5 1 ATOM 203 C C6 . DA B 2 3 ? -7.918 39.902 1.907 1.00 43.87 ? 12 DA B C6 1 ATOM 204 N N6 . DA B 2 3 ? -8.549 39.007 2.688 1.00 39.43 ? 12 DA B N6 1 ATOM 205 N N1 . DA B 2 3 ? -6.603 39.786 1.615 1.00 48.54 ? 12 DA B N1 1 ATOM 206 C C2 . DA B 2 3 ? -6.033 40.704 0.838 1.00 44.90 ? 12 DA B C2 1 ATOM 207 N N3 . DA B 2 3 ? -6.559 41.772 0.267 1.00 39.57 ? 12 DA B N3 1 ATOM 208 C C4 . DA B 2 3 ? -7.867 41.844 0.587 1.00 35.84 ? 12 DA B C4 1 ATOM 209 P P . DC B 2 4 ? -10.689 43.203 -4.725 1.00 54.95 ? 13 DC B P 1 ATOM 210 O OP1 . DC B 2 4 ? -10.867 43.794 -6.066 1.00 56.03 ? 13 DC B OP1 1 ATOM 211 O OP2 . DC B 2 4 ? -11.854 42.533 -4.114 1.00 83.03 ? 13 DC B OP2 1 ATOM 212 O "O5'" . DC B 2 4 ? -9.430 42.228 -4.726 1.00 43.93 ? 13 DC B "O5'" 1 ATOM 213 C "C5'" . DC B 2 4 ? -8.645 42.280 -5.937 1.00 54.66 ? 13 DC B "C5'" 1 ATOM 214 C "C4'" . DC B 2 4 ? -7.465 41.345 -5.766 1.00 58.54 ? 13 DC B "C4'" 1 ATOM 215 O "O4'" . DC B 2 4 ? -7.086 41.317 -4.365 1.00 58.71 ? 13 DC B "O4'" 1 ATOM 216 C "C3'" . DC B 2 4 ? -7.706 39.900 -6.147 1.00 56.82 ? 13 DC B "C3'" 1 ATOM 217 O "O3'" . DC B 2 4 ? -7.484 39.713 -7.525 1.00 50.29 ? 13 DC B "O3'" 1 ATOM 218 C "C2'" . DC B 2 4 ? -6.702 39.152 -5.296 1.00 62.04 ? 13 DC B "C2'" 1 ATOM 219 C "C1'" . DC B 2 4 ? -6.654 40.012 -4.049 1.00 59.01 ? 13 DC B "C1'" 1 ATOM 220 N N1 . DC B 2 4 ? -7.548 39.501 -2.967 1.00 46.86 ? 13 DC B N1 1 ATOM 221 C C2 . DC B 2 4 ? -6.902 38.570 -2.150 1.00 47.53 ? 13 DC B C2 1 ATOM 222 O O2 . DC B 2 4 ? -5.721 38.322 -2.447 1.00 31.71 ? 13 DC B O2 1 ATOM 223 N N3 . DC B 2 4 ? -7.617 38.039 -1.130 1.00 39.79 ? 13 DC B N3 1 ATOM 224 C C4 . DC B 2 4 ? -8.891 38.412 -0.940 1.00 41.55 ? 13 DC B C4 1 ATOM 225 N N4 . DC B 2 4 ? -9.537 37.849 0.079 1.00 48.29 ? 13 DC B N4 1 ATOM 226 C C5 . DC B 2 4 ? -9.558 39.368 -1.778 1.00 39.13 ? 13 DC B C5 1 ATOM 227 C C6 . DC B 2 4 ? -8.833 39.897 -2.797 1.00 37.94 ? 13 DC B C6 1 ATOM 228 P P . DC B 2 5 ? -7.782 38.543 -8.536 1.00 60.26 ? 14 DC B P 1 ATOM 229 O OP1 . DC B 2 5 ? -7.076 38.839 -9.802 1.00 67.28 ? 14 DC B OP1 1 ATOM 230 O OP2 . DC B 2 5 ? -9.255 38.437 -8.600 1.00 56.54 ? 14 DC B OP2 1 ATOM 231 O "O5'" . DC B 2 5 ? -7.143 37.257 -7.853 1.00 37.52 ? 14 DC B "O5'" 1 ATOM 232 C "C5'" . DC B 2 5 ? -5.716 37.127 -7.742 1.00 38.01 ? 14 DC B "C5'" 1 ATOM 233 C "C4'" . DC B 2 5 ? -5.401 35.869 -6.970 1.00 43.07 ? 14 DC B "C4'" 1 ATOM 234 O "O4'" . DC B 2 5 ? -5.646 36.061 -5.546 1.00 29.53 ? 14 DC B "O4'" 1 ATOM 235 C "C3'" . DC B 2 5 ? -6.242 34.646 -7.301 1.00 41.58 ? 14 DC B "C3'" 1 ATOM 236 O "O3'" . DC B 2 5 ? -5.866 34.088 -8.537 1.00 36.41 ? 14 DC B "O3'" 1 ATOM 237 C "C2'" . DC B 2 5 ? -5.940 33.753 -6.113 1.00 30.12 ? 14 DC B "C2'" 1 ATOM 238 C "C1'" . DC B 2 5 ? -5.881 34.774 -4.980 1.00 43.72 ? 14 DC B "C1'" 1 ATOM 239 N N1 . DC B 2 5 ? -7.126 34.892 -4.145 1.00 28.95 ? 14 DC B N1 1 ATOM 240 C C2 . DC B 2 5 ? -7.340 34.031 -3.086 1.00 22.94 ? 14 DC B C2 1 ATOM 241 O O2 . DC B 2 5 ? -6.508 33.146 -2.816 1.00 28.06 ? 14 DC B O2 1 ATOM 242 N N3 . DC B 2 5 ? -8.484 34.173 -2.356 1.00 33.64 ? 14 DC B N3 1 ATOM 243 C C4 . DC B 2 5 ? -9.364 35.129 -2.658 1.00 24.64 ? 14 DC B C4 1 ATOM 244 N N4 . DC B 2 5 ? -10.464 35.266 -1.953 1.00 27.89 ? 14 DC B N4 1 ATOM 245 C C5 . DC B 2 5 ? -9.156 36.033 -3.756 1.00 29.22 ? 14 DC B C5 1 ATOM 246 C C6 . DC B 2 5 ? -8.023 35.868 -4.458 1.00 25.62 ? 14 DC B C6 1 ATOM 247 P P . DG B 2 6 ? -6.639 32.952 -9.288 1.00 37.69 ? 15 DG B P 1 ATOM 248 O OP1 . DG B 2 6 ? -6.048 32.745 -10.626 1.00 26.21 ? 15 DG B OP1 1 ATOM 249 O OP2 . DG B 2 6 ? -8.079 33.312 -9.264 1.00 29.14 ? 15 DG B OP2 1 ATOM 250 O "O5'" . DG B 2 6 ? -6.401 31.647 -8.402 1.00 48.46 ? 15 DG B "O5'" 1 ATOM 251 C "C5'" . DG B 2 6 ? -7.518 30.768 -8.147 1.00 44.90 ? 15 DG B "C5'" 1 ATOM 252 C "C4'" . DG B 2 6 ? -7.159 29.863 -6.979 1.00 41.79 ? 15 DG B "C4'" 1 ATOM 253 O "O4'" . DG B 2 6 ? -7.038 30.663 -5.772 1.00 36.03 ? 15 DG B "O4'" 1 ATOM 254 C "C3'" . DG B 2 6 ? -8.164 28.788 -6.630 1.00 34.99 ? 15 DG B "C3'" 1 ATOM 255 O "O3'" . DG B 2 6 ? -7.924 27.608 -7.360 1.00 35.62 ? 15 DG B "O3'" 1 ATOM 256 C "C2'" . DG B 2 6 ? -7.943 28.587 -5.141 1.00 36.96 ? 15 DG B "C2'" 1 ATOM 257 C "C1'" . DG B 2 6 ? -7.676 30.017 -4.695 1.00 28.19 ? 15 DG B "C1'" 1 ATOM 258 N N9 . DG B 2 6 ? -8.928 30.756 -4.317 1.00 23.84 ? 15 DG B N9 1 ATOM 259 C C8 . DG B 2 6 ? -9.565 31.842 -4.842 1.00 26.98 ? 15 DG B C8 1 ATOM 260 N N7 . DG B 2 6 ? -10.663 32.209 -4.227 1.00 25.86 ? 15 DG B N7 1 ATOM 261 C C5 . DG B 2 6 ? -10.766 31.271 -3.191 1.00 28.37 ? 15 DG B C5 1 ATOM 262 C C6 . DG B 2 6 ? -11.733 31.121 -2.173 1.00 29.24 ? 15 DG B C6 1 ATOM 263 O O6 . DG B 2 6 ? -12.738 31.809 -1.964 1.00 31.17 ? 15 DG B O6 1 ATOM 264 N N1 . DG B 2 6 ? -11.450 30.033 -1.333 1.00 26.42 ? 15 DG B N1 1 ATOM 265 C C2 . DG B 2 6 ? -10.369 29.183 -1.445 1.00 37.69 ? 15 DG B C2 1 ATOM 266 N N2 . DG B 2 6 ? -10.309 28.200 -0.512 1.00 21.31 ? 15 DG B N2 1 ATOM 267 N N3 . DG B 2 6 ? -9.459 29.331 -2.410 1.00 22.78 ? 15 DG B N3 1 ATOM 268 C C4 . DG B 2 6 ? -9.717 30.380 -3.233 1.00 29.21 ? 15 DG B C4 1 ATOM 269 P P . DC B 2 7 ? -9.212 26.806 -7.850 1.00 30.56 ? 16 DC B P 1 ATOM 270 O OP1 . DC B 2 7 ? -8.782 25.963 -8.987 1.00 29.24 ? 16 DC B OP1 1 ATOM 271 O OP2 . DC B 2 7 ? -10.275 27.789 -8.126 1.00 37.54 ? 16 DC B OP2 1 ATOM 272 O "O5'" . DC B 2 7 ? -9.570 25.914 -6.592 1.00 32.22 ? 16 DC B "O5'" 1 ATOM 273 C "C5'" . DC B 2 7 ? -8.549 25.055 -6.033 1.00 25.02 ? 16 DC B "C5'" 1 ATOM 274 C "C4'" . DC B 2 7 ? -9.159 24.482 -4.768 1.00 35.50 ? 16 DC B "C4'" 1 ATOM 275 O "O4'" . DC B 2 7 ? -9.303 25.549 -3.791 1.00 39.70 ? 16 DC B "O4'" 1 ATOM 276 C "C3'" . DC B 2 7 ? -10.539 23.882 -4.924 1.00 35.38 ? 16 DC B "C3'" 1 ATOM 277 O "O3'" . DC B 2 7 ? -10.481 22.528 -5.333 1.00 34.78 ? 16 DC B "O3'" 1 ATOM 278 C "C2'" . DC B 2 7 ? -11.125 24.033 -3.532 1.00 29.07 ? 16 DC B "C2'" 1 ATOM 279 C "C1'" . DC B 2 7 ? -10.523 25.357 -3.100 1.00 34.48 ? 16 DC B "C1'" 1 ATOM 280 N N1 . DC B 2 7 ? -11.450 26.491 -3.396 1.00 27.28 ? 16 DC B N1 1 ATOM 281 C C2 . DC B 2 7 ? -12.365 26.733 -2.375 1.00 32.62 ? 16 DC B C2 1 ATOM 282 O O2 . DC B 2 7 ? -12.342 26.032 -1.359 1.00 39.16 ? 16 DC B O2 1 ATOM 283 N N3 . DC B 2 7 ? -13.240 27.745 -2.563 1.00 33.19 ? 16 DC B N3 1 ATOM 284 C C4 . DC B 2 7 ? -13.235 28.479 -3.671 1.00 24.45 ? 16 DC B C4 1 ATOM 285 N N4 . DC B 2 7 ? -14.152 29.436 -3.717 1.00 42.12 ? 16 DC B N4 1 ATOM 286 C C5 . DC B 2 7 ? -12.301 28.243 -4.729 1.00 32.84 ? 16 DC B C5 1 ATOM 287 C C6 . DC B 2 7 ? -11.417 27.218 -4.536 1.00 27.89 ? 16 DC B C6 1 ATOM 288 P P . DA B 2 8 ? -11.690 21.930 -6.174 1.00 28.65 ? 17 DA B P 1 ATOM 289 O OP1 . DA B 2 8 ? -11.266 20.577 -6.590 1.00 56.14 ? 17 DA B OP1 1 ATOM 290 O OP2 . DA B 2 8 ? -11.994 22.887 -7.260 1.00 31.90 ? 17 DA B OP2 1 ATOM 291 O "O5'" . DA B 2 8 ? -12.882 21.851 -5.132 1.00 26.26 ? 17 DA B "O5'" 1 ATOM 292 C "C5'" . DA B 2 8 ? -12.843 20.847 -4.089 1.00 34.34 ? 17 DA B "C5'" 1 ATOM 293 C "C4'" . DA B 2 8 ? -14.081 21.033 -3.223 1.00 23.62 ? 17 DA B "C4'" 1 ATOM 294 O "O4'" . DA B 2 8 ? -14.028 22.370 -2.662 1.00 35.42 ? 17 DA B "O4'" 1 ATOM 295 C "C3'" . DA B 2 8 ? -15.423 20.946 -3.911 1.00 33.15 ? 17 DA B "C3'" 1 ATOM 296 O "O3'" . DA B 2 8 ? -15.942 19.626 -3.875 1.00 38.12 ? 17 DA B "O3'" 1 ATOM 297 C "C2'" . DA B 2 8 ? -16.309 21.890 -3.127 1.00 18.55 ? 17 DA B "C2'" 1 ATOM 298 C "C1'" . DA B 2 8 ? -15.324 22.909 -2.572 1.00 21.53 ? 17 DA B "C1'" 1 ATOM 299 N N9 . DA B 2 8 ? -15.363 24.188 -3.333 1.00 19.69 ? 17 DA B N9 1 ATOM 300 C C8 . DA B 2 8 ? -14.525 24.670 -4.287 1.00 37.55 ? 17 DA B C8 1 ATOM 301 N N7 . DA B 2 8 ? -14.862 25.837 -4.750 1.00 46.14 ? 17 DA B N7 1 ATOM 302 C C5 . DA B 2 8 ? -16.017 26.160 -4.049 1.00 37.27 ? 17 DA B C5 1 ATOM 303 C C6 . DA B 2 8 ? -16.867 27.277 -4.081 1.00 48.40 ? 17 DA B C6 1 ATOM 304 N N6 . DA B 2 8 ? -16.676 28.334 -4.886 1.00 37.78 ? 17 DA B N6 1 ATOM 305 N N1 . DA B 2 8 ? -17.935 27.287 -3.256 1.00 42.46 ? 17 DA B N1 1 ATOM 306 C C2 . DA B 2 8 ? -18.110 26.230 -2.464 1.00 41.98 ? 17 DA B C2 1 ATOM 307 N N3 . DA B 2 8 ? -17.383 25.138 -2.352 1.00 31.02 ? 17 DA B N3 1 ATOM 308 C C4 . DA B 2 8 ? -16.330 25.158 -3.185 1.00 31.59 ? 17 DA B C4 1 ATOM 309 P P . DG B 2 9 ? -17.156 19.245 -4.818 1.00 49.36 ? 18 DG B P 1 ATOM 310 O OP1 . DG B 2 9 ? -17.332 17.780 -4.759 1.00 53.59 ? 18 DG B OP1 1 ATOM 311 O OP2 . DG B 2 9 ? -16.925 19.856 -6.140 1.00 50.97 ? 18 DG B OP2 1 ATOM 312 O "O5'" . DG B 2 9 ? -18.400 19.963 -4.115 1.00 43.84 ? 18 DG B "O5'" 1 ATOM 313 C "C5'" . DG B 2 9 ? -18.758 19.486 -2.807 1.00 42.60 ? 18 DG B "C5'" 1 ATOM 314 C "C4'" . DG B 2 9 ? -20.153 19.968 -2.456 1.00 41.40 ? 18 DG B "C4'" 1 ATOM 315 O "O4'" . DG B 2 9 ? -20.180 21.419 -2.505 1.00 47.69 ? 18 DG B "O4'" 1 ATOM 316 C "C3'" . DG B 2 9 ? -21.259 19.497 -3.382 1.00 52.76 ? 18 DG B "C3'" 1 ATOM 317 O "O3'" . DG B 2 9 ? -22.460 19.296 -2.668 1.00 74.83 ? 18 DG B "O3'" 1 ATOM 318 C "C2'" . DG B 2 9 ? -21.370 20.620 -4.396 1.00 41.73 ? 18 DG B "C2'" 1 ATOM 319 C "C1'" . DG B 2 9 ? -21.049 21.830 -3.538 1.00 39.38 ? 18 DG B "C1'" 1 ATOM 320 N N9 . DG B 2 9 ? -20.388 22.899 -4.333 1.00 23.71 ? 18 DG B N9 1 ATOM 321 C C8 . DG B 2 9 ? -19.292 22.778 -5.165 1.00 27.02 ? 18 DG B C8 1 ATOM 322 N N7 . DG B 2 9 ? -18.922 23.894 -5.741 1.00 29.09 ? 18 DG B N7 1 ATOM 323 C C5 . DG B 2 9 ? -19.856 24.807 -5.240 1.00 28.43 ? 18 DG B C5 1 ATOM 324 C C6 . DG B 2 9 ? -19.971 26.193 -5.505 1.00 32.31 ? 18 DG B C6 1 ATOM 325 O O6 . DG B 2 9 ? -19.248 26.855 -6.244 1.00 47.77 ? 18 DG B O6 1 ATOM 326 N N1 . DG B 2 9 ? -21.050 26.723 -4.789 1.00 34.52 ? 18 DG B N1 1 ATOM 327 C C2 . DG B 2 9 ? -21.910 26.062 -3.942 1.00 38.94 ? 18 DG B C2 1 ATOM 328 N N2 . DG B 2 9 ? -22.883 26.764 -3.356 1.00 39.82 ? 18 DG B N2 1 ATOM 329 N N3 . DG B 2 9 ? -21.793 24.758 -3.701 1.00 29.22 ? 18 DG B N3 1 ATOM 330 C C4 . DG B 2 9 ? -20.748 24.222 -4.388 1.00 27.88 ? 18 DG B C4 1 HETATM 331 O O . HOH C 3 . ? -13.053 34.419 0.432 1.00 43.96 ? 20 HOH A O 1 HETATM 332 O O . HOH C 3 . ? -13.059 33.550 2.928 1.00 43.71 ? 21 HOH A O 1 HETATM 333 O O . HOH C 3 . ? -15.428 34.363 10.920 1.00 49.51 ? 23 HOH A O 1 HETATM 334 O O . HOH C 3 . ? -9.991 32.757 5.854 1.00 52.32 ? 25 HOH A O 1 HETATM 335 O O . HOH C 3 . ? -7.641 35.887 5.494 1.00 23.60 ? 27 HOH A O 1 HETATM 336 O O . HOH C 3 . ? -0.923 34.069 8.855 1.00 47.60 ? 28 HOH A O 1 HETATM 337 O O . HOH C 3 . ? -10.597 28.572 11.436 1.00 51.68 ? 29 HOH A O 1 HETATM 338 O O . HOH C 3 . ? -24.374 30.323 6.828 1.00 41.50 ? 32 HOH A O 1 HETATM 339 O O . HOH C 3 . ? -3.738 34.607 10.358 1.00 48.16 ? 33 HOH A O 1 HETATM 340 O O . HOH C 3 . ? -0.623 30.114 8.650 1.00 45.32 ? 37 HOH A O 1 HETATM 341 O O . HOH C 3 . ? -13.445 26.193 11.828 1.00 35.05 ? 40 HOH A O 1 HETATM 342 O O . HOH C 3 . ? 5.815 39.359 7.578 1.00 40.21 ? 42 HOH A O 1 HETATM 343 O O . HOH C 3 . ? -16.227 33.263 1.917 1.00 33.24 ? 43 HOH A O 1 HETATM 344 O O . HOH C 3 . ? -23.192 39.502 -3.896 1.00 37.44 ? 45 HOH A O 1 HETATM 345 O O . HOH C 3 . ? -2.588 44.942 0.079 1.00 34.74 ? 46 HOH A O 1 HETATM 346 O O . HOH C 3 . ? -12.525 31.054 5.943 1.00 38.81 ? 50 HOH A O 1 HETATM 347 O O . HOH C 3 . ? -15.559 32.606 -2.523 1.00 44.25 ? 51 HOH A O 1 HETATM 348 O O . HOH C 3 . ? 3.010 31.952 0.239 1.00 36.03 ? 55 HOH A O 1 HETATM 349 O O . HOH C 3 . ? -6.502 28.304 0.509 1.00 30.47 ? 57 HOH A O 1 HETATM 350 O O . HOH C 3 . ? 4.584 41.147 4.944 1.00 52.34 ? 58 HOH A O 1 HETATM 351 O O . HOH C 3 . ? -17.758 32.095 -5.122 1.00 61.07 ? 61 HOH A O 1 HETATM 352 O O . HOH C 3 . ? -5.038 32.643 9.178 1.00 51.04 ? 62 HOH A O 1 HETATM 353 O O . HOH C 3 . ? 4.255 30.205 -0.593 1.00 52.68 ? 63 HOH A O 1 HETATM 354 O O . HOH C 3 . ? -17.005 27.569 10.327 1.00 30.71 ? 66 HOH A O 1 HETATM 355 O O . HOH C 3 . ? -15.833 31.783 11.567 1.00 44.86 ? 69 HOH A O 1 HETATM 356 O O . HOH C 3 . ? -12.381 33.776 10.062 1.00 51.14 ? 71 HOH A O 1 HETATM 357 O O . HOH C 3 . ? -19.433 36.898 5.924 1.00 45.91 ? 72 HOH A O 1 HETATM 358 O O . HOH C 3 . ? -14.010 28.588 14.530 1.00 52.10 ? 76 HOH A O 1 HETATM 359 O O . HOH C 3 . ? -20.883 38.129 0.635 1.00 48.17 ? 77 HOH A O 1 HETATM 360 O O . HOH C 3 . ? 6.813 31.634 1.826 1.00 41.63 ? 82 HOH A O 1 HETATM 361 O O . HOH C 3 . ? -17.441 29.915 -7.057 1.00 38.33 ? 83 HOH A O 1 HETATM 362 O O . HOH C 3 . ? -18.885 38.409 2.017 1.00 45.41 ? 86 HOH A O 1 HETATM 363 O O . HOH C 3 . ? -26.490 38.041 1.428 1.00 50.93 ? 88 HOH A O 1 HETATM 364 O O . HOH C 3 . ? -18.618 32.498 4.393 1.00 53.62 ? 89 HOH A O 1 HETATM 365 O O . HOH C 3 . ? -15.943 33.652 5.244 1.00 50.91 ? 90 HOH A O 1 HETATM 366 O O . HOH C 3 . ? -20.124 24.315 2.599 1.00 50.57 ? 91 HOH A O 1 HETATM 367 O O . HOH C 3 . ? -18.390 36.331 -2.656 1.00 47.86 ? 92 HOH A O 1 HETATM 368 O O . HOH C 3 . ? -24.934 42.628 3.350 1.00 60.94 ? 95 HOH A O 1 HETATM 369 O O . HOH C 3 . ? -0.758 37.499 7.023 1.00 56.23 ? 96 HOH A O 1 HETATM 370 O O . HOH C 3 . ? -17.139 36.705 11.421 1.00 50.49 ? 99 HOH A O 1 HETATM 371 O O . HOH C 3 . ? -22.211 36.864 3.487 1.00 55.69 ? 101 HOH A O 1 HETATM 372 O O . HOH C 3 . ? -24.408 38.872 2.161 1.00 40.81 ? 102 HOH A O 1 HETATM 373 O O . HOH C 3 . ? -26.210 35.550 2.511 1.00 56.51 ? 103 HOH A O 1 HETATM 374 O O . HOH C 3 . ? -23.380 40.960 1.982 1.00 51.53 ? 104 HOH A O 1 HETATM 375 O O . HOH C 3 . ? -14.153 35.077 4.253 1.00 53.21 ? 106 HOH A O 1 HETATM 376 O O . HOH D 3 . ? -16.778 22.730 -6.785 1.00 30.31 ? 19 HOH B O 1 HETATM 377 O O . HOH D 3 . ? -13.199 36.563 -2.951 1.00 36.58 ? 22 HOH B O 1 HETATM 378 O O . HOH D 3 . ? -23.858 25.120 -0.731 1.00 50.40 ? 24 HOH B O 1 HETATM 379 O O . HOH D 3 . ? -15.325 43.044 9.451 1.00 31.02 ? 26 HOH B O 1 HETATM 380 O O . HOH D 3 . ? -15.460 31.443 -4.999 1.00 46.41 ? 30 HOH B O 1 HETATM 381 O O . HOH D 3 . ? -12.540 41.939 7.986 1.00 56.37 ? 31 HOH B O 1 HETATM 382 O O . HOH D 3 . ? -10.349 38.906 -10.702 1.00 57.17 ? 34 HOH B O 1 HETATM 383 O O . HOH D 3 . ? -7.625 35.714 -11.878 1.00 49.37 ? 35 HOH B O 1 HETATM 384 O O . HOH D 3 . ? -11.916 38.788 0.126 1.00 42.98 ? 36 HOH B O 1 HETATM 385 O O . HOH D 3 . ? -10.016 23.423 -9.807 1.00 52.29 ? 38 HOH B O 1 HETATM 386 O O . HOH D 3 . ? -6.755 27.510 -1.680 1.00 30.55 ? 39 HOH B O 1 HETATM 387 O O . HOH D 3 . ? -21.895 17.209 -5.451 1.00 43.72 ? 41 HOH B O 1 HETATM 388 O O . HOH D 3 . ? -7.924 37.664 -13.780 1.00 44.97 ? 44 HOH B O 1 HETATM 389 O O . HOH D 3 . ? -15.219 44.564 -3.816 1.00 53.76 ? 47 HOH B O 1 HETATM 390 O O . HOH D 3 . ? -5.134 26.144 -5.982 1.00 36.96 ? 48 HOH B O 1 HETATM 391 O O . HOH D 3 . ? -12.449 41.580 -1.716 1.00 41.48 ? 49 HOH B O 1 HETATM 392 O O . HOH D 3 . ? -8.450 19.696 -5.740 1.00 40.94 ? 52 HOH B O 1 HETATM 393 O O . HOH D 3 . ? -9.356 35.167 -10.467 1.00 46.65 ? 53 HOH B O 1 HETATM 394 O O . HOH D 3 . ? -16.408 17.107 -2.482 1.00 40.75 ? 54 HOH B O 1 HETATM 395 O O . HOH D 3 . ? -13.698 32.806 -5.569 1.00 47.91 ? 56 HOH B O 1 HETATM 396 O O . HOH D 3 . ? -18.281 23.056 -0.228 1.00 61.76 ? 59 HOH B O 1 HETATM 397 O O . HOH D 3 . ? -8.039 17.595 -6.577 1.00 51.15 ? 60 HOH B O 1 HETATM 398 O O . HOH D 3 . ? -11.211 17.535 -2.943 1.00 62.44 ? 64 HOH B O 1 HETATM 399 O O . HOH D 3 . ? -13.656 30.346 -11.236 1.00 45.64 ? 65 HOH B O 1 HETATM 400 O O . HOH D 3 . ? -5.631 25.633 -3.175 1.00 33.73 ? 67 HOH B O 1 HETATM 401 O O . HOH D 3 . ? -15.052 36.847 -5.323 1.00 58.40 ? 68 HOH B O 1 HETATM 402 O O . HOH D 3 . ? -14.904 39.166 2.615 1.00 39.54 ? 70 HOH B O 1 HETATM 403 O O . HOH D 3 . ? -11.453 35.982 -6.951 1.00 42.22 ? 73 HOH B O 1 HETATM 404 O O . HOH D 3 . ? -19.093 43.142 5.157 1.00 46.35 ? 74 HOH B O 1 HETATM 405 O O . HOH D 3 . ? -5.740 22.626 -6.590 1.00 41.20 ? 75 HOH B O 1 HETATM 406 O O . HOH D 3 . ? -20.306 41.362 6.362 1.00 49.68 ? 78 HOH B O 1 HETATM 407 O O . HOH D 3 . ? -12.605 46.289 -6.461 1.00 57.10 ? 79 HOH B O 1 HETATM 408 O O . HOH D 3 . ? -7.219 23.435 -11.769 1.00 56.86 ? 80 HOH B O 1 HETATM 409 O O . HOH D 3 . ? -16.399 44.659 -1.846 1.00 41.17 ? 81 HOH B O 1 HETATM 410 O O . HOH D 3 . ? -8.243 17.394 -2.429 1.00 36.16 ? 84 HOH B O 1 HETATM 411 O O . HOH D 3 . ? -12.746 40.419 3.627 1.00 67.86 ? 85 HOH B O 1 HETATM 412 O O . HOH D 3 . ? -10.139 35.190 -19.596 1.00 44.31 ? 87 HOH B O 1 HETATM 413 O O . HOH D 3 . ? -17.844 44.748 -5.524 1.00 55.04 ? 93 HOH B O 1 HETATM 414 O O . HOH D 3 . ? -8.539 39.498 -12.454 1.00 46.18 ? 94 HOH B O 1 HETATM 415 O O . HOH D 3 . ? -18.531 14.532 -2.356 1.00 50.83 ? 97 HOH B O 1 HETATM 416 O O . HOH D 3 . ? -8.559 28.492 -10.534 1.00 46.58 ? 98 HOH B O 1 HETATM 417 O O . HOH D 3 . ? -15.396 46.917 8.265 1.00 38.52 ? 100 HOH B O 1 HETATM 418 O O . HOH D 3 . ? -14.056 38.039 -10.135 1.00 48.06 ? 105 HOH B O 1 HETATM 419 O O . HOH D 3 . ? -13.341 30.720 -6.711 1.00 47.66 ? 107 HOH B O 1 HETATM 420 O O . HOH D 3 . ? -5.013 39.505 -9.041 1.00 71.16 ? 108 HOH B O 1 #