data_1XT7 # _entry.id 1XT7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 1XT7 RCSB RCSB030740 WWPDB D_1000030740 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1T5N unspecified 'SOLUTION STRUCTURE OF THE CALCIUM-DEPENDENT ANTIBIOTIC DAPTOMYCIN' PDB 1T5M unspecified 'SOLUTION STRUCTURE OF THE CALCIUM-DEPENDENT ANTIBIOTIC DAPTOMYCIN' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1XT7 _pdbx_database_status.recvd_initial_deposition_date 2004-10-21 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_mr REL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ball, L.-J.' 1 'Goult, C.M.' 2 'Donarski, J.A.' 3 'Micklefield, J.' 4 'Ramesh, V.' 5 # _citation.id primary _citation.title 'NMR Structure Determination and Calcium Binding Effects of Lipopeptide Antibiotic Daptomycin' _citation.journal_abbrev Org.Biomol.Chem. _citation.journal_volume 2 _citation.page_first 1872 _citation.page_last ? _citation.year 2004 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 1477-0520 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 15227539 _citation.pdbx_database_id_DOI 10.1039/B402722A # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Ball, L.-J.' 1 primary 'Goult, C.M.' 2 primary 'Donarski, J.A.' 3 primary 'Micklefield, J.' 4 primary 'Ramesh, V.' 5 # _cell.entry_id 1XT7 _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1XT7 _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn DAPTOMYCIN 1484.440 1 ? ? ? ? 2 non-polymer syn 'DECANOIC ACID' 172.265 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'A21978C, CUBICIN' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'W(DSG)DTG(ORN)D(DAL)DG(DSN)(LME)(KYN)' _entity_poly.pdbx_seq_one_letter_code_can WNDTGADADGSEW _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 TRP n 1 2 DSG n 1 3 ASP n 1 4 THR n 1 5 GLY n 1 6 ORN n 1 7 ASP n 1 8 DAL n 1 9 ASP n 1 10 GLY n 1 11 DSN n 1 12 LME n 1 13 KYN n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'STREPTOMYCES ROSEOSPORUS' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 67294 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name NOR _struct_ref.db_code NOR00001 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession NOR00001 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1XT7 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 13 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession NOR00001 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 14 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 14 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DAL 'D-peptide linking' . D-ALANINE ? 'C3 H7 N O2' 89.093 DKA non-polymer . 'DECANOIC ACID' ? 'C10 H20 O2' 172.265 DSG 'D-peptide linking' . D-ASPARAGINE ? 'C4 H8 N2 O3' 132.118 DSN 'D-peptide linking' . D-SERINE ? 'C3 H7 N O3' 105.093 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 KYN 'L-peptide linking' n '(2S)-2-amino-4-(2-aminophenyl)-4-oxobutanoic acid' L-KYNURENINE 'C10 H12 N2 O3' 208.214 LME 'L-peptide linking' n '(2S,3R)-2-azanyl-3-methyl-pentanedioic acid' '(3R)-3-methyl-L-glutamic acid' 'C6 H11 N O4' 161.156 ORN 'L-peptide linking' n L-ornithine ? 'C5 H12 N2 O2' 132.161 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 # _pdbx_nmr_exptl.experiment_id 1 _pdbx_nmr_exptl.conditions_id 1 _pdbx_nmr_exptl.type '2D NOESY' _pdbx_nmr_exptl.solution_id 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.pressure AMBIENT _pdbx_nmr_exptl_sample_conditions.pH 5.05 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.contents 1 '0.8MM DAPTOMYCIN' 2 'PH 5.05' # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model DRX _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.field_strength 600 # _pdbx_nmr_refine.entry_id 1XT7 _pdbx_nmr_refine.method 'CONSTRAINED MOLECULAR DYNAMICS' _pdbx_nmr_refine.details 'A TOTAL OF 52 DISTANCE RESTRAINTS WERE USED FOR NMR STRUCTURE CALCULATION.' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 1XT7 _pdbx_nmr_details.text 'THIS STRUCTURE WAS DETERMINED USING STANDARD 2D HOMONUCLEAR TECHNIQUES.' # _pdbx_nmr_ensemble.entry_id 1XT7 _pdbx_nmr_ensemble.conformers_calculated_total_number ? _pdbx_nmr_ensemble.conformers_submitted_total_number 1 _pdbx_nmr_ensemble.conformer_selection_criteria ? # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement 'DYANA 1.5' ? 'GUNTERT, P.' 1 'structure solution' 'XWINNMR 3.5' ? ? 2 'structure solution' 'NMRPIPE 1.0' ? ? 3 'structure solution' 'SPARKY 3.0' ? ? 4 'structure solution' 'DYANA 1.5' ? ? 5 # _exptl.entry_id 1XT7 _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 1XT7 _struct.title 'Daptomycin NMR Structure' _struct.pdbx_descriptor DAPTOMYCIN _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1XT7 _struct_keywords.pdbx_keywords ANTIBIOTIC _struct_keywords.text 'DAPTOMYCIN, CUBICIN, ANTIBIOTIC, LIPOPEPTIDE, CALCIUM-DEPENDENT' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? B DKA . C1 ? ? ? 1_555 A TRP 1 N ? ? A DKA 1 A TRP 2 1_555 ? ? ? ? ? ? ? 1.322 ? covale2 covale ? ? A TRP 1 C ? ? ? 1_555 A DSG 2 N ? ? A TRP 2 A DSG 3 1_555 ? ? ? ? ? ? ? 1.324 ? covale3 covale ? ? A DSG 2 C ? ? ? 1_555 A ASP 3 N ? ? A DSG 3 A ASP 4 1_555 ? ? ? ? ? ? ? 1.323 ? covale4 covale ? ? A THR 4 OG1 ? ? ? 1_555 A KYN 13 C ? ? A THR 5 A KYN 14 1_555 ? ? ? ? ? ? ? 1.362 ? covale5 covale ? ? A GLY 5 C ? ? ? 1_555 A ORN 6 N ? ? A GLY 6 A ORN 7 1_555 ? ? ? ? ? ? ? 1.325 ? covale6 covale ? ? A ORN 6 C ? ? ? 1_555 A ASP 7 N ? ? A ORN 7 A ASP 8 1_555 ? ? ? ? ? ? ? 1.325 ? covale7 covale ? ? A ASP 7 C ? ? ? 1_555 A DAL 8 N ? ? A ASP 8 A DAL 9 1_555 ? ? ? ? ? ? ? 1.324 ? covale8 covale ? ? A DAL 8 C ? ? ? 1_555 A ASP 9 N ? ? A DAL 9 A ASP 10 1_555 ? ? ? ? ? ? ? 1.324 ? covale9 covale ? ? A GLY 10 C ? ? ? 1_555 A DSN 11 N ? ? A GLY 11 A DSN 12 1_555 ? ? ? ? ? ? ? 1.321 ? covale10 covale ? ? A DSN 11 C ? ? ? 1_555 A LME 12 N ? ? A DSN 12 A LME 13 1_555 ? ? ? ? ? ? ? 1.325 ? covale11 covale ? ? A LME 12 C ? ? ? 1_555 A KYN 13 N ? ? A LME 13 A KYN 14 1_555 ? ? ? ? ? ? ? 1.325 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 1XT7 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 1XT7 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 N N . TRP A 1 1 ? 0.783 -10.123 4.285 1.00 0.00 ? 2 TRP A N 1 ATOM 2 C CA . TRP A 1 1 ? -0.651 -10.396 4.177 1.00 0.00 ? 2 TRP A CA 1 ATOM 3 C C . TRP A 1 1 ? -1.041 -10.632 2.729 1.00 0.00 ? 2 TRP A C 1 ATOM 4 O O . TRP A 1 1 ? -0.459 -9.975 1.821 1.00 0.00 ? 2 TRP A O 1 ATOM 5 C CB . TRP A 1 1 ? -1.504 -9.248 4.794 1.00 0.00 ? 2 TRP A CB 1 ATOM 6 C CG . TRP A 1 1 ? -1.155 -7.899 4.227 1.00 0.00 ? 2 TRP A CG 1 ATOM 7 C CD1 . TRP A 1 1 ? -1.636 -7.331 3.033 1.00 0.00 ? 2 TRP A CD1 1 ATOM 8 C CD2 . TRP A 1 1 ? -0.195 -6.993 4.698 1.00 0.00 ? 2 TRP A CD2 1 ATOM 9 N NE1 . TRP A 1 1 ? -1.022 -6.182 2.809 1.00 0.00 ? 2 TRP A NE1 1 ATOM 10 C CE2 . TRP A 1 1 ? -0.157 -5.943 3.772 1.00 0.00 ? 2 TRP A CE2 1 ATOM 11 C CE3 . TRP A 1 1 ? 0.632 -7.008 5.829 1.00 0.00 ? 2 TRP A CE3 1 ATOM 12 C CZ2 . TRP A 1 1 ? 0.731 -4.869 3.943 1.00 0.00 ? 2 TRP A CZ2 1 ATOM 13 C CZ3 . TRP A 1 1 ? 1.522 -5.931 6.007 1.00 0.00 ? 2 TRP A CZ3 1 ATOM 14 C CH2 . TRP A 1 1 ? 1.571 -4.875 5.073 1.00 0.00 ? 2 TRP A CH2 1 ATOM 15 H H . TRP A 1 1 ? 1.207 -9.592 3.552 1.00 0.00 ? 2 TRP A H 1 ATOM 16 H HA . TRP A 1 1 ? -0.872 -11.314 4.730 1.00 0.00 ? 2 TRP A HA 1 ATOM 17 H HB2 . TRP A 1 1 ? -2.563 -9.449 4.614 1.00 0.00 ? 2 TRP A HB2 1 ATOM 18 H HB3 . TRP A 1 1 ? -1.346 -9.232 5.874 1.00 0.00 ? 2 TRP A HB3 1 ATOM 19 H HD1 . TRP A 1 1 ? -2.353 -7.762 2.404 1.00 0.00 ? 2 TRP A HD1 1 ATOM 20 H HE1 . TRP A 1 1 ? -1.181 -5.597 2.022 1.00 0.00 ? 2 TRP A HE1 1 ATOM 21 H HE3 . TRP A 1 1 ? 0.596 -7.797 6.524 1.00 0.00 ? 2 TRP A HE3 1 ATOM 22 H HZ2 . TRP A 1 1 ? 0.769 -4.083 3.247 1.00 0.00 ? 2 TRP A HZ2 1 ATOM 23 H HZ3 . TRP A 1 1 ? 2.158 -5.916 6.842 1.00 0.00 ? 2 TRP A HZ3 1 ATOM 24 H HH2 . TRP A 1 1 ? 2.244 -4.082 5.223 1.00 0.00 ? 2 TRP A HH2 1 HETATM 25 N N . DSG A 1 2 ? -1.973 -11.523 2.429 1.00 0.00 ? 3 DSG A N 1 HETATM 26 C CA . DSG A 1 2 ? -2.426 -11.845 1.069 1.00 0.00 ? 3 DSG A CA 1 HETATM 27 C C . DSG A 1 2 ? -1.251 -12.129 0.162 1.00 0.00 ? 3 DSG A C 1 HETATM 28 O O . DSG A 1 2 ? -1.021 -11.407 -0.848 1.00 0.00 ? 3 DSG A O 1 HETATM 29 C CB . DSG A 1 2 ? -3.325 -10.675 0.508 1.00 0.00 ? 3 DSG A CB 1 HETATM 30 C CG . DSG A 1 2 ? -4.605 -10.529 1.296 1.00 0.00 ? 3 DSG A CG 1 HETATM 31 O OD1 . DSG A 1 2 ? -4.596 -9.873 2.374 1.00 0.00 ? 3 DSG A OD1 1 HETATM 32 N ND2 . DSG A 1 2 ? -5.742 -11.024 0.846 1.00 0.00 ? 3 DSG A ND2 1 HETATM 33 H H . DSG A 1 2 ? -2.434 -12.001 3.176 1.00 0.00 ? 3 DSG A H 1 HETATM 34 H HA . DSG A 1 2 ? -3.041 -12.721 1.111 1.00 0.00 ? 3 DSG A HA 1 HETATM 35 H HB2 . DSG A 1 2 ? -2.784 -9.727 0.528 1.00 0.00 ? 3 DSG A HB2 1 HETATM 36 H HB3 . DSG A 1 2 ? -3.576 -10.906 -0.528 1.00 0.00 ? 3 DSG A HB3 1 HETATM 37 H HD21 . DSG A 1 2 ? -5.773 -11.520 -0.016 1.00 0.00 ? 3 DSG A HD21 1 HETATM 38 H HD22 . DSG A 1 2 ? -6.584 -10.901 1.365 1.00 0.00 ? 3 DSG A HD22 1 ATOM 39 N N . ASP A 1 3 ? -0.501 -13.191 0.408 1.00 0.00 ? 4 ASP A N 1 ATOM 40 C CA . ASP A 1 3 ? 0.506 -13.680 -0.563 1.00 0.00 ? 4 ASP A CA 1 ATOM 41 C C . ASP A 1 3 ? -0.202 -14.316 -1.720 1.00 0.00 ? 4 ASP A C 1 ATOM 42 O O . ASP A 1 3 ? 0.147 -13.970 -2.883 1.00 0.00 ? 4 ASP A O 1 ATOM 43 C CB . ASP A 1 3 ? 1.479 -14.688 0.135 1.00 0.00 ? 4 ASP A CB 1 ATOM 44 C CG . ASP A 1 3 ? 2.318 -14.013 1.197 1.00 0.00 ? 4 ASP A CG 1 ATOM 45 O OD1 . ASP A 1 3 ? 1.737 -13.587 2.353 1.00 0.00 ? 4 ASP A OD1 1 ATOM 46 O OD2 . ASP A 1 3 ? 3.555 -13.863 1.044 1.00 0.00 ? 4 ASP A OD2 1 ATOM 47 H H . ASP A 1 3 ? -0.741 -13.768 1.188 1.00 0.00 ? 4 ASP A H 1 ATOM 48 H HA . ASP A 1 3 ? 1.097 -12.833 -0.898 1.00 0.00 ? 4 ASP A HA 1 ATOM 49 H HB2 . ASP A 1 3 ? 0.917 -15.506 0.592 1.00 0.00 ? 4 ASP A HB2 1 ATOM 50 H HB3 . ASP A 1 3 ? 2.136 -15.110 -0.629 1.00 0.00 ? 4 ASP A HB3 1 ATOM 51 H HD2 . ASP A 1 3 ? 4.008 -14.084 0.264 1.00 0.00 ? 4 ASP A HD2 1 ATOM 52 N N . THR A 1 4 ? -1.285 -15.052 -1.528 1.00 0.00 ? 5 THR A N 1 ATOM 53 C CA . THR A 1 4 ? -2.234 -15.380 -2.594 1.00 0.00 ? 5 THR A CA 1 ATOM 54 C C . THR A 1 4 ? -2.983 -14.136 -3.038 1.00 0.00 ? 5 THR A C 1 ATOM 55 O O . THR A 1 4 ? -3.203 -13.243 -2.177 1.00 0.00 ? 5 THR A O 1 ATOM 56 C CB . THR A 1 4 ? -3.279 -16.439 -2.115 1.00 0.00 ? 5 THR A CB 1 ATOM 57 O OG1 . THR A 1 4 ? -3.796 -16.102 -0.857 1.00 0.00 ? 5 THR A OG1 1 ATOM 58 C CG2 . THR A 1 4 ? -2.631 -17.843 -1.997 1.00 0.00 ? 5 THR A CG2 1 ATOM 59 H H . THR A 1 4 ? -1.549 -15.257 -0.587 1.00 0.00 ? 5 THR A H 1 ATOM 60 H HA . THR A 1 4 ? -1.684 -15.785 -3.448 1.00 0.00 ? 5 THR A HA 1 ATOM 61 H HB . THR A 1 4 ? -4.077 -16.509 -2.853 1.00 0.00 ? 5 THR A HB 1 ATOM 62 H HG21 . THR A 1 4 ? -3.378 -18.564 -1.663 1.00 0.00 ? 5 THR A HG21 1 ATOM 63 H HG22 . THR A 1 4 ? -2.248 -18.158 -2.971 1.00 0.00 ? 5 THR A HG22 1 ATOM 64 H HG23 . THR A 1 4 ? -1.811 -17.824 -1.279 1.00 0.00 ? 5 THR A HG23 1 ATOM 65 N N . GLY A 1 5 ? -3.485 -14.069 -4.262 1.00 0.00 ? 6 GLY A N 1 ATOM 66 C CA . GLY A 1 5 ? -4.548 -13.159 -4.680 1.00 0.00 ? 6 GLY A CA 1 ATOM 67 C C . GLY A 1 5 ? -4.292 -11.682 -4.471 1.00 0.00 ? 6 GLY A C 1 ATOM 68 O O . GLY A 1 5 ? -3.982 -10.996 -5.484 1.00 0.00 ? 6 GLY A O 1 ATOM 69 H H . GLY A 1 5 ? -3.290 -14.830 -4.880 1.00 0.00 ? 6 GLY A H 1 ATOM 70 H HA2 . GLY A 1 5 ? -4.719 -13.320 -5.748 1.00 0.00 ? 6 GLY A HA2 1 ATOM 71 H HA3 . GLY A 1 5 ? -5.469 -13.435 -4.163 1.00 0.00 ? 6 GLY A HA3 1 HETATM 72 N N . ORN A 1 6 ? -4.619 -11.112 -3.321 1.00 0.00 ? 7 ORN A N 1 HETATM 73 C CA . ORN A 1 6 ? -4.808 -9.678 -3.090 1.00 0.00 ? 7 ORN A CA 1 HETATM 74 C CB . ORN A 1 6 ? -3.651 -8.760 -3.586 1.00 0.00 ? 7 ORN A CB 1 HETATM 75 C CG . ORN A 1 6 ? -2.273 -9.180 -3.005 1.00 0.00 ? 7 ORN A CG 1 HETATM 76 C CD . ORN A 1 6 ? -1.120 -8.238 -3.444 1.00 0.00 ? 7 ORN A CD 1 HETATM 77 N NE . ORN A 1 6 ? -1.187 -6.904 -2.808 1.00 0.00 ? 7 ORN A NE 1 HETATM 78 C C . ORN A 1 6 ? -6.171 -9.268 -3.623 1.00 0.00 ? 7 ORN A C 1 HETATM 79 O O . ORN A 1 6 ? -6.301 -8.182 -4.253 1.00 0.00 ? 7 ORN A O 1 HETATM 80 H H . ORN A 1 6 ? -4.960 -11.712 -2.598 1.00 0.00 ? 7 ORN A H 1 HETATM 81 H HA . ORN A 1 6 ? -4.860 -9.539 -2.004 1.00 0.00 ? 7 ORN A HA 1 HETATM 82 H HB2 . ORN A 1 6 ? -3.604 -8.763 -4.675 1.00 0.00 ? 7 ORN A HB2 1 HETATM 83 H HB3 . ORN A 1 6 ? -3.869 -7.740 -3.260 1.00 0.00 ? 7 ORN A HB3 1 HETATM 84 H HG2 . ORN A 1 6 ? -2.035 -10.190 -3.348 1.00 0.00 ? 7 ORN A HG2 1 HETATM 85 H HG3 . ORN A 1 6 ? -2.323 -9.188 -1.916 1.00 0.00 ? 7 ORN A HG3 1 HETATM 86 H HD2 . ORN A 1 6 ? -1.135 -8.125 -4.531 1.00 0.00 ? 7 ORN A HD2 1 HETATM 87 H HD3 . ORN A 1 6 ? -0.172 -8.706 -3.164 1.00 0.00 ? 7 ORN A HD3 1 HETATM 88 H HE1 . ORN A 1 6 ? -1.193 -6.996 -1.792 1.00 0.00 ? 7 ORN A HE1 1 HETATM 89 H HE2 . ORN A 1 6 ? -2.024 -6.405 -3.104 1.00 0.00 ? 7 ORN A HE2 1 HETATM 90 H HE3 . ORN A 1 6 ? -0.370 -6.357 -3.080 1.00 0.00 ? 7 ORN A HE3 1 ATOM 91 N N . ASP A 1 7 ? -7.223 -10.030 -3.363 1.00 0.00 ? 8 ASP A N 1 ATOM 92 C CA . ASP A 1 7 ? -8.589 -9.715 -3.782 1.00 0.00 ? 8 ASP A CA 1 ATOM 93 C C . ASP A 1 7 ? -9.562 -10.613 -3.037 1.00 0.00 ? 8 ASP A C 1 ATOM 94 O O . ASP A 1 7 ? -9.304 -11.847 -2.963 1.00 0.00 ? 8 ASP A O 1 ATOM 95 C CB . ASP A 1 7 ? -8.773 -9.893 -5.316 1.00 0.00 ? 8 ASP A CB 1 ATOM 96 C CG . ASP A 1 7 ? -10.053 -9.244 -5.789 1.00 0.00 ? 8 ASP A CG 1 ATOM 97 O OD1 . ASP A 1 7 ? -10.199 -7.845 -5.680 1.00 0.00 ? 8 ASP A OD1 1 ATOM 98 O OD2 . ASP A 1 7 ? -10.998 -9.908 -6.298 1.00 0.00 ? 8 ASP A OD2 1 ATOM 99 H H . ASP A 1 7 ? -7.077 -10.869 -2.844 1.00 0.00 ? 8 ASP A H 1 ATOM 100 H HA . ASP A 1 7 ? -8.789 -8.673 -3.514 1.00 0.00 ? 8 ASP A HA 1 ATOM 101 H HB2 . ASP A 1 7 ? -7.944 -9.423 -5.848 1.00 0.00 ? 8 ASP A HB2 1 ATOM 102 H HB3 . ASP A 1 7 ? -8.774 -10.956 -5.564 1.00 0.00 ? 8 ASP A HB3 1 ATOM 103 H HD2 . ASP A 1 7 ? -10.947 -10.838 -6.403 1.00 0.00 ? 8 ASP A HD2 1 HETATM 104 N N . DAL A 1 8 ? -10.650 -10.113 -2.471 1.00 0.00 ? 9 DAL A N 1 HETATM 105 C CA . DAL A 1 8 ? -11.589 -10.889 -1.657 1.00 0.00 ? 9 DAL A CA 1 HETATM 106 C CB . DAL A 1 8 ? -10.971 -11.143 -0.255 1.00 0.00 ? 9 DAL A CB 1 HETATM 107 C C . DAL A 1 8 ? -12.037 -12.173 -2.335 1.00 0.00 ? 9 DAL A C 1 HETATM 108 O O . DAL A 1 8 ? -12.110 -13.233 -1.653 1.00 0.00 ? 9 DAL A O 1 HETATM 109 H H . DAL A 1 8 ? -10.806 -9.128 -2.531 1.00 0.00 ? 9 DAL A H 1 HETATM 110 H HA . DAL A 1 8 ? -12.486 -10.275 -1.514 1.00 0.00 ? 9 DAL A HA 1 HETATM 111 H HB1 . DAL A 1 8 ? -10.105 -11.802 -0.335 1.00 0.00 ? 9 DAL A HB1 1 HETATM 112 H HB2 . DAL A 1 8 ? -11.711 -11.604 0.401 1.00 0.00 ? 9 DAL A HB2 1 HETATM 113 H HB3 . DAL A 1 8 ? -10.655 -10.196 0.185 1.00 0.00 ? 9 DAL A HB3 1 ATOM 114 N N . ASP A 1 9 ? -12.326 -12.188 -3.627 1.00 0.00 ? 10 ASP A N 1 ATOM 115 C CA . ASP A 1 9 ? -12.699 -13.403 -4.348 1.00 0.00 ? 10 ASP A CA 1 ATOM 116 C C . ASP A 1 9 ? -11.936 -13.458 -5.662 1.00 0.00 ? 10 ASP A C 1 ATOM 117 O O . ASP A 1 9 ? -12.540 -13.241 -6.750 1.00 0.00 ? 10 ASP A O 1 ATOM 118 C CB . ASP A 1 9 ? -14.243 -13.458 -4.519 1.00 0.00 ? 10 ASP A CB 1 ATOM 119 C CG . ASP A 1 9 ? -14.689 -14.779 -5.096 1.00 0.00 ? 10 ASP A CG 1 ATOM 120 O OD1 . ASP A 1 9 ? -14.484 -15.928 -4.395 1.00 0.00 ? 10 ASP A OD1 1 ATOM 121 O OD2 . ASP A 1 9 ? -15.254 -14.815 -6.223 1.00 0.00 ? 10 ASP A OD2 1 ATOM 122 H H . ASP A 1 9 ? -12.323 -11.326 -4.131 1.00 0.00 ? 10 ASP A H 1 ATOM 123 H HA . ASP A 1 9 ? -12.403 -14.277 -3.765 1.00 0.00 ? 10 ASP A HA 1 ATOM 124 H HB2 . ASP A 1 9 ? -14.714 -13.338 -3.540 1.00 0.00 ? 10 ASP A HB2 1 ATOM 125 H HB3 . ASP A 1 9 ? -14.574 -12.640 -5.161 1.00 0.00 ? 10 ASP A HB3 1 ATOM 126 H HD2 . ASP A 1 9 ? -15.539 -15.630 -6.597 1.00 0.00 ? 10 ASP A HD2 1 ATOM 127 N N . GLY A 1 10 ? -10.640 -13.728 -5.661 1.00 0.00 ? 11 GLY A N 1 ATOM 128 C CA . GLY A 1 10 ? -9.842 -13.773 -6.880 1.00 0.00 ? 11 GLY A CA 1 ATOM 129 C C . GLY A 1 10 ? -8.475 -14.366 -6.622 1.00 0.00 ? 11 GLY A C 1 ATOM 130 O O . GLY A 1 10 ? -7.622 -13.660 -6.016 1.00 0.00 ? 11 GLY A O 1 ATOM 131 H H . GLY A 1 10 ? -10.174 -13.826 -4.786 1.00 0.00 ? 11 GLY A H 1 ATOM 132 H HA2 . GLY A 1 10 ? -10.361 -14.368 -7.635 1.00 0.00 ? 11 GLY A HA2 1 ATOM 133 H HA3 . GLY A 1 10 ? -9.716 -12.760 -7.268 1.00 0.00 ? 11 GLY A HA3 1 HETATM 134 N N . DSN A 1 11 ? -8.167 -15.567 -7.078 1.00 0.00 ? 12 DSN A N 1 HETATM 135 C CA . DSN A 1 11 ? -6.848 -16.184 -6.911 1.00 0.00 ? 12 DSN A CA 1 HETATM 136 C C . DSN A 1 11 ? -6.653 -16.770 -5.526 1.00 0.00 ? 12 DSN A C 1 HETATM 137 O O . DSN A 1 11 ? -5.477 -16.787 -5.067 1.00 0.00 ? 12 DSN A O 1 HETATM 138 C CB . DSN A 1 11 ? -6.643 -17.296 -7.979 1.00 0.00 ? 12 DSN A CB 1 HETATM 139 O OG . DSN A 1 11 ? -5.533 -17.867 -7.908 1.00 0.00 ? 12 DSN A OG 1 HETATM 140 H H . DSN A 1 11 ? -8.885 -16.106 -7.519 1.00 0.00 ? 12 DSN A H 1 HETATM 141 H HA . DSN A 1 11 ? -6.085 -15.417 -7.077 1.00 0.00 ? 12 DSN A HA 1 HETATM 142 H HB2 . DSN A 1 11 ? -7.372 -18.094 -7.819 1.00 0.00 ? 12 DSN A HB2 1 HETATM 143 H HB3 . DSN A 1 11 ? -6.798 -16.879 -8.977 1.00 0.00 ? 12 DSN A HB3 1 HETATM 144 H HG . DSN A 1 11 ? -4.702 -17.149 -8.016 1.00 0.00 ? 12 DSN A HG 1 HETATM 145 N N . LME A 1 12 ? -7.673 -17.247 -4.828 1.00 0.00 ? 13 LME A N 1 HETATM 146 C CA . LME A 1 12 ? -7.596 -17.916 -3.525 1.00 0.00 ? 13 LME A CA 1 HETATM 147 C CB . LME A 1 12 ? -7.247 -19.438 -3.656 1.00 0.00 ? 13 LME A CB 1 HETATM 148 C C1 . LME A 1 12 ? -5.791 -19.677 -4.123 1.00 0.00 ? 13 LME A C1 1 HETATM 149 C CG . LME A 1 12 ? -8.243 -20.189 -4.593 1.00 0.00 ? 13 LME A CG 1 HETATM 150 C CD . LME A 1 12 ? -9.677 -20.046 -4.143 1.00 0.00 ? 13 LME A CD 1 HETATM 151 O OE1 . LME A 1 12 ? -10.064 -20.543 -2.936 1.00 0.00 ? 13 LME A OE1 1 HETATM 152 O OE2 . LME A 1 12 ? -10.510 -19.449 -4.880 1.00 0.00 ? 13 LME A OE2 1 HETATM 153 C C . LME A 1 12 ? -6.794 -17.195 -2.449 1.00 0.00 ? 13 LME A C 1 HETATM 154 O O . LME A 1 12 ? -6.528 -17.838 -1.395 1.00 0.00 ? 13 LME A O 1 HETATM 155 H H . LME A 1 12 ? -8.573 -17.234 -5.260 1.00 0.00 ? 13 LME A H 1 HETATM 156 H HA . LME A 1 12 ? -8.618 -17.889 -3.131 1.00 0.00 ? 13 LME A HA 1 HETATM 157 H HB . LME A 1 12 ? -7.342 -19.887 -2.661 1.00 0.00 ? 13 LME A HB 1 HETATM 158 H H11 . LME A 1 12 ? -5.669 -19.399 -5.174 1.00 0.00 ? 13 LME A H11 1 HETATM 159 H H12 . LME A 1 12 ? -5.085 -19.146 -3.514 1.00 0.00 ? 13 LME A H12 1 HETATM 160 H H13 . LME A 1 12 ? -5.565 -20.764 -4.049 1.00 0.00 ? 13 LME A H13 1 HETATM 161 H HG2 . LME A 1 12 ? -7.996 -21.254 -4.601 1.00 0.00 ? 13 LME A HG2 1 HETATM 162 H HG3 . LME A 1 12 ? -8.146 -19.811 -5.613 1.00 0.00 ? 13 LME A HG3 1 HETATM 163 H HE2 . LME A 1 12 ? -11.406 -19.343 -4.614 1.00 0.00 ? 13 LME A HE2 1 HETATM 164 C C . KYN A 1 13 ? -5.055 -15.732 -0.494 1.00 0.00 ? 14 KYN A C 1 HETATM 165 N N . KYN A 1 13 ? -6.551 -15.894 -2.516 1.00 0.00 ? 14 KYN A N 1 HETATM 166 C C1 . KYN A 1 13 ? -8.211 -15.191 0.053 1.00 0.00 ? 14 KYN A C1 1 HETATM 167 N N1 . KYN A 1 13 ? -10.825 -16.153 -0.382 1.00 0.00 ? 14 KYN A N1 1 HETATM 168 O O2 . KYN A 1 13 ? -7.950 -16.352 0.369 1.00 0.00 ? 14 KYN A O2 1 HETATM 169 C CA . KYN A 1 13 ? -6.046 -15.056 -1.427 1.00 0.00 ? 14 KYN A CA 1 HETATM 170 C CB . KYN A 1 13 ? -7.215 -14.327 -0.690 1.00 0.00 ? 14 KYN A CB 1 HETATM 171 C CG . KYN A 1 13 ? -10.696 -15.135 0.370 1.00 0.00 ? 14 KYN A CG 1 HETATM 172 C CZ . KYN A 1 13 ? -10.447 -12.876 2.024 1.00 0.00 ? 14 KYN A CZ 1 HETATM 173 C CD1 . KYN A 1 13 ? -11.824 -14.542 0.953 1.00 0.00 ? 14 KYN A CD1 1 HETATM 174 C CD2 . KYN A 1 13 ? -9.429 -14.584 0.623 1.00 0.00 ? 14 KYN A CD2 1 HETATM 175 C CE1 . KYN A 1 13 ? -11.706 -13.419 1.772 1.00 0.00 ? 14 KYN A CE1 1 HETATM 176 C CE2 . KYN A 1 13 ? -9.317 -13.461 1.452 1.00 0.00 ? 14 KYN A CE2 1 HETATM 177 O O . KYN A 1 13 ? -5.242 -15.681 0.723 1.00 0.00 ? 14 KYN A O 1 HETATM 178 H H . KYN A 1 13 ? -6.867 -15.400 -3.322 1.00 0.00 ? 14 KYN A H 1 HETATM 179 H HN1 . KYN A 1 13 ? -11.716 -16.558 -0.569 1.00 0.00 ? 14 KYN A HN1 1 HETATM 180 H HN1A . KYN A 1 13 ? -9.971 -16.579 -0.818 1.00 0.00 ? 14 KYN A HN1A 1 HETATM 181 H HA . KYN A 1 13 ? -5.492 -14.241 -1.899 1.00 0.00 ? 14 KYN A HA 1 HETATM 182 H HB . KYN A 1 13 ? -7.773 -13.755 -1.437 1.00 0.00 ? 14 KYN A HB 1 HETATM 183 H HBA . KYN A 1 13 ? -6.781 -13.613 0.014 1.00 0.00 ? 14 KYN A HBA 1 HETATM 184 H HZ . KYN A 1 13 ? -10.344 -11.995 2.681 1.00 0.00 ? 14 KYN A HZ 1 HETATM 185 H HD1 . KYN A 1 13 ? -12.833 -14.951 0.771 1.00 0.00 ? 14 KYN A HD1 1 HETATM 186 H HE1 . KYN A 1 13 ? -12.604 -12.962 2.223 1.00 0.00 ? 14 KYN A HE1 1 HETATM 187 H HE2 . KYN A 1 13 ? -8.331 -13.027 1.688 1.00 0.00 ? 14 KYN A HE2 1 HETATM 188 C C1 . DKA B 2 . ? 1.495 -10.401 5.364 1.00 0.00 ? 1 DKA A C1 1 HETATM 189 O O1 . DKA B 2 . ? 0.952 -10.983 6.344 1.00 0.00 ? 1 DKA A O1 1 HETATM 190 C C2 . DKA B 2 . ? 2.957 -10.031 5.519 1.00 0.00 ? 1 DKA A C2 1 HETATM 191 C C3 . DKA B 2 . ? 3.519 -9.081 4.427 1.00 0.00 ? 1 DKA A C3 1 HETATM 192 C C4 . DKA B 2 . ? 4.962 -8.592 4.728 1.00 0.00 ? 1 DKA A C4 1 HETATM 193 C C5 . DKA B 2 . ? 6.021 -9.721 4.607 1.00 0.00 ? 1 DKA A C5 1 HETATM 194 C C6 . DKA B 2 . ? 7.457 -9.167 4.813 1.00 0.00 ? 1 DKA A C6 1 HETATM 195 C C7 . DKA B 2 . ? 8.517 -10.249 4.681 1.00 0.00 ? 1 DKA A C7 1 HETATM 196 C C8 . DKA B 2 . ? 9.976 -9.770 4.775 1.00 0.00 ? 1 DKA A C8 1 HETATM 197 C C9 . DKA B 2 . ? 10.351 -9.272 6.197 1.00 0.00 ? 1 DKA A C9 1 HETATM 198 C C10 . DKA B 2 . ? 11.838 -8.848 6.271 1.00 0.00 ? 1 DKA A C10 1 HETATM 199 H H21 . DKA B 2 . ? 3.538 -10.956 5.526 1.00 0.00 ? 1 DKA A H21 1 HETATM 200 H H22 . DKA B 2 . ? 3.069 -9.546 6.493 1.00 0.00 ? 1 DKA A H22 1 HETATM 201 H H31 . DKA B 2 . ? 2.880 -8.197 4.364 1.00 0.00 ? 1 DKA A H31 1 HETATM 202 H H32 . DKA B 2 . ? 3.508 -9.587 3.459 1.00 0.00 ? 1 DKA A H32 1 HETATM 203 H H41 . DKA B 2 . ? 4.997 -8.163 5.732 1.00 0.00 ? 1 DKA A H41 1 HETATM 204 H H42 . DKA B 2 . ? 5.208 -7.807 4.010 1.00 0.00 ? 1 DKA A H42 1 HETATM 205 H H51 . DKA B 2 . ? 5.826 -10.487 5.361 1.00 0.00 ? 1 DKA A H51 1 HETATM 206 H H52 . DKA B 2 . ? 5.471 -9.911 3.533 1.00 0.00 ? 1 DKA A H52 1 HETATM 207 H H61 . DKA B 2 . ? 7.522 -8.719 5.806 1.00 0.00 ? 1 DKA A H61 1 HETATM 208 H H62 . DKA B 2 . ? 7.656 -8.398 4.063 1.00 0.00 ? 1 DKA A H62 1 HETATM 209 H H71 . DKA B 2 . ? 8.352 -11.044 5.459 1.00 0.00 ? 1 DKA A H71 1 HETATM 210 H H72 . DKA B 2 . ? 8.393 -10.777 3.708 1.00 0.00 ? 1 DKA A H72 1 HETATM 211 H H81 . DKA B 2 . ? 10.646 -10.589 4.503 1.00 0.00 ? 1 DKA A H81 1 HETATM 212 H H82 . DKA B 2 . ? 10.116 -8.960 4.056 1.00 0.00 ? 1 DKA A H82 1 HETATM 213 H H91 . DKA B 2 . ? 10.177 -10.072 6.920 1.00 0.00 ? 1 DKA A H91 1 HETATM 214 H H92 . DKA B 2 . ? 9.731 -8.414 6.464 1.00 0.00 ? 1 DKA A H92 1 HETATM 215 H H101 . DKA B 2 . ? 12.482 -9.696 6.032 1.00 0.00 ? 1 DKA A H101 1 HETATM 216 H H102 . DKA B 2 . ? 12.068 -8.503 7.281 1.00 0.00 ? 1 DKA A H102 1 HETATM 217 H H103 . DKA B 2 . ? 12.032 -8.038 5.567 1.00 0.00 ? 1 DKA A H103 1 # _database_PDB_caveat.id 1 _database_PDB_caveat.text 'DSG A 3 C-ALPHA WRONG HAND' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 TRP 1 2 2 TRP TRP A . n A 1 2 DSG 2 3 3 DSG DSG A . n A 1 3 ASP 3 4 4 ASP ASP A . n A 1 4 THR 4 5 5 THR THR A . n A 1 5 GLY 5 6 6 GLY GLY A . n A 1 6 ORN 6 7 7 ORN ORN A . n A 1 7 ASP 7 8 8 ASP ASP A . n A 1 8 DAL 8 9 9 DAL DAL A . n A 1 9 ASP 9 10 10 ASP ASP A . n A 1 10 GLY 10 11 11 GLY GLY A . n A 1 11 DSN 11 12 12 DSN DSN A . n A 1 12 LME 12 13 13 LME LME A . n A 1 13 KYN 13 14 14 KYN KYN A . n # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id DKA _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 1 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id DKA _pdbx_nonpoly_scheme.auth_mon_id DKA _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _pdbx_molecule_features.prd_id PRD_000217 _pdbx_molecule_features.name Daptomycin _pdbx_molecule_features.type 'Cyclic lipopeptide' _pdbx_molecule_features.class Antibiotic _pdbx_molecule_features.details ;DAPTOMYCIN IS AN ACIDIC CYCLIC LIPOPEPTIDE. THE SCAFFOLD IS MADE OF TWO PARTS: (1) THREE RESIDUES N-TERM EXOCYCLIC PART (2) A DECAPEPTIDE LACTONE RING DERIVED FROM CYCLISATION OF THR3 SIDE CHAIN ONTO THE C-TER CARBOXYL GROUP THE N-DECANOYL FATTY ACID IS LINKED TO THE MAIN BODY OF THE MOLECULE VIA N-TERM ACYLATION. ; # loop_ _pdbx_molecule.instance_id _pdbx_molecule.prd_id _pdbx_molecule.asym_id 1 PRD_000217 A 1 PRD_000217 B # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2004-11-16 2 'Structure model' 1 1 2011-06-14 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2011-07-27 5 'Structure model' 1 4 2012-12-12 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Non-polymer description' 7 4 'Structure model' 'Structure summary' 8 5 'Structure model' Other # _pdbx_entry_details.entry_id 1XT7 _pdbx_entry_details.compound_details ;DAPTOMYCIN IS A CYCLIC TRIDECAMER LIPOPETIDE. HERE, DAPTOMYCIN IS REPRESENTED BY GROUPING TOGETHER THE SEQUENCE (SEQRES) AND ONE LIGAND (HET) DKA. ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OG1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 THR _pdbx_validate_close_contact.auth_seq_id_1 5 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 KYN _pdbx_validate_close_contact.auth_seq_id_2 14 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.18 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CG A ASP 8 ? ? OD1 A ASP 8 ? ? 1.411 1.249 0.162 0.023 N 2 1 CB A DSN 12 ? ? OG A DSN 12 ? ? 1.250 1.418 -0.168 0.013 N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ORN _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 7 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 78.02 _pdbx_validate_torsion.psi 44.57 # _pdbx_validate_chiral.id 1 _pdbx_validate_chiral.PDB_model_num 1 _pdbx_validate_chiral.auth_atom_id CA _pdbx_validate_chiral.label_alt_id ? _pdbx_validate_chiral.auth_asym_id A _pdbx_validate_chiral.auth_comp_id DSG _pdbx_validate_chiral.auth_seq_id 3 _pdbx_validate_chiral.PDB_ins_code ? _pdbx_validate_chiral.details 'WRONG HAND' _pdbx_validate_chiral.omega . # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'DECANOIC ACID' _pdbx_entity_nonpoly.comp_id DKA #