0.018590
0.000000
0.000000
0.000000
0.014888
0.000000
0.000000
0.000000
0.009649
0.00000
0.00000
0.00000
Kuzin, A.P.
Abashidze, M.
Forouhar, F.
Vorobiev, S.M.
Acton, T.B.
Ma, L.-C.
Xiao, R.
Montelione, G.T.
Tong, L.
Hunt, J.F.
Northeast Structural Genomics Consortium (NESG)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
53.793
67.166
103.638
C10 H15 N5 O10 P2
427.201
n
ADENOSINE-5'-DIPHOSPHATE
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Zn 2
65.409
ZINC ION
non-polymer
N
1
N
P
N
2
N
O
N
3
N
O
N
4
N
O
N
5
S
P
N
6
N
O
N
7
N
O
N
8
N
O
N
9
N
O
N
10
N
C
N
11
R
C
N
12
N
O
N
13
S
C
N
14
N
O
N
15
R
C
N
16
N
O
N
17
R
C
Y
18
N
N
Y
19
N
C
Y
20
N
N
Y
21
N
C
Y
22
N
C
N
23
N
N
Y
24
N
N
Y
25
N
C
Y
26
N
N
Y
27
N
C
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
H
N
42
N
H
N
43
N
N
N
44
S
C
N
45
N
C
N
46
N
O
N
47
N
C
N
48
N
O
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
N
N
57
S
C
N
58
N
C
N
59
N
O
N
60
N
C
N
61
N
C
N
62
N
C
N
63
N
N
N
64
N
C
N
65
N
N
N
66
N
N
N
67
N
O
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
N
N
84
S
C
N
85
N
C
N
86
N
O
N
87
N
C
N
88
N
C
N
89
N
O
N
90
N
N
N
91
N
O
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
N
N
101
S
C
N
102
N
C
N
103
N
O
N
104
N
C
N
105
N
C
N
106
N
O
N
107
N
O
N
108
N
O
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
N
N
117
R
C
N
118
N
C
N
119
N
O
N
120
N
C
N
121
N
S
N
122
N
O
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
N
N
131
S
C
N
132
N
C
N
133
N
O
N
134
N
C
N
135
N
C
N
136
N
C
N
137
N
O
N
138
N
N
N
139
N
O
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
N
N
151
S
C
N
152
N
C
N
153
N
O
N
154
N
C
N
155
N
C
N
156
N
C
N
157
N
O
N
158
N
O
N
159
N
O
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
N
N
170
N
C
N
171
N
C
N
172
N
O
N
173
N
O
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
N
N
180
S
C
N
181
N
C
N
182
N
O
N
183
N
C
Y
184
N
C
Y
185
N
N
Y
186
N
C
Y
187
N
C
Y
188
N
N
N
189
N
O
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
N
N
204
S
C
N
205
N
C
N
206
N
O
N
207
S
C
N
208
N
C
N
209
N
C
N
210
N
C
N
211
N
O
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
N
N
226
S
C
N
227
N
C
N
228
N
O
N
229
N
C
N
230
N
C
N
231
N
C
N
232
N
C
N
233
N
O
N
234
N
H
N
235
N
H
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
N
N
248
S
C
N
249
N
C
N
250
N
O
N
251
N
C
N
252
N
C
N
253
N
C
N
254
N
C
N
255
N
N
N
256
N
O
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
N
N
273
S
C
N
274
N
C
N
275
N
O
N
276
N
C
N
277
N
C
N
278
N
S
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
N
N
293
S
C
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
C
N
298
N
C
N
299
N
SE
N
300
N
C
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
N
N
313
S
C
N
314
N
C
N
315
N
O
N
316
N
C
Y
317
N
C
Y
318
N
C
Y
319
N
C
Y
320
N
C
Y
321
N
C
Y
322
N
C
N
323
N
O
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
N
N
336
S
C
N
337
N
C
N
338
N
O
N
339
N
C
N
340
N
C
N
341
N
C
N
342
N
O
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
N
N
353
S
C
N
354
N
C
N
355
N
O
N
356
N
C
N
357
N
O
N
358
N
O
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
N
N
367
S
C
N
368
N
C
N
369
N
O
N
370
R
C
N
371
N
O
N
372
N
C
N
373
N
O
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
N
N
384
S
C
N
385
N
C
N
386
N
O
N
387
N
C
Y
388
N
C
Y
389
N
C
Y
390
N
C
Y
391
N
N
Y
392
N
C
Y
393
N
C
Y
394
N
C
Y
395
N
C
Y
396
N
C
N
397
N
O
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
N
N
411
S
C
N
412
N
C
N
413
N
O
N
414
N
C
Y
415
N
C
Y
416
N
C
Y
417
N
C
Y
418
N
C
Y
419
N
C
Y
420
N
C
N
421
N
O
N
422
N
O
N
423
N
H
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
N
N
435
S
C
N
436
N
C
N
437
N
O
N
438
N
C
N
439
N
C
N
440
N
C
N
441
N
O
N
442
N
H
N
443
N
H
N
444
N
H
N
445
N
H
N
446
N
H
N
447
N
H
N
448
N
H
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
ZN
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
Y
30
N
sing
Y
31
N
sing
Y
32
N
doub
N
33
N
sing
Y
34
N
sing
Y
35
N
sing
Y
36
N
doub
N
37
N
sing
Y
38
N
doub
N
39
N
sing
N
40
N
sing
Y
41
N
sing
Y
42
N
doub
N
43
N
sing
Y
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
doub
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
doub
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
doub
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
doub
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
doub
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
doub
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
doub
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
doub
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
doub
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
doub
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
doub
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
Y
184
N
sing
Y
185
N
doub
Y
186
N
doub
N
187
N
sing
Y
188
N
sing
N
189
N
sing
Y
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
doub
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
doub
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
doub
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
doub
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
doub
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
doub
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
Y
311
N
doub
Y
312
N
sing
Y
313
N
sing
N
314
N
sing
Y
315
N
doub
N
316
N
sing
Y
317
N
doub
N
318
N
sing
Y
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
doub
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
doub
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
doub
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
doub
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
Y
380
N
doub
Y
381
N
sing
Y
382
N
sing
N
383
N
sing
Y
384
N
doub
Y
385
N
sing
Y
386
N
sing
N
387
N
sing
Y
388
N
sing
Y
389
N
doub
N
390
N
sing
Y
391
N
doub
N
392
N
sing
Y
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
doub
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
Y
408
N
doub
Y
409
N
sing
Y
410
N
sing
N
411
N
sing
Y
412
N
doub
N
413
N
sing
Y
414
N
doub
N
415
N
sing
Y
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
doub
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
N
437
N
sing
N
438
N
sing
To be Published
0353
X-ray structure of Clostridium acetobutylicum thymidine kinase with ADP. Northeast Structural Genomics Target CAR26.
10.2210/pdb1xx6/pdb
pdb_00001xx6
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
CCD
2004-09-18
ADSC QUANTUM 4
SINGLE WAVELENGTH
M
x-ray
1
0.979
1.0
X4A
NSLS
0.979
SYNCHROTRON
NSLS BEAMLINE X4A
22084.779
Thymidine kinase
2.7.1.21
2
man
polymer
65.409
ZINC ION
2
syn
non-polymer
427.201
ADENOSINE-5'-DIPHOSPHATE
2
syn
non-polymer
18.015
water
171
nat
water
no
yes
MYRPKDHGWVEVIVGP(MSE)YSGKSEELIRRIRRAKIAKQKIQVFKPEIDNRYSKEDVVSH(MSE)GEKEQAVAIKNSR
EILKYFEEDTEVIAIDEVQFFDDEIVEIVNKIAESGRRVICAGLD(MSE)DFRGKPFGPIPEL(MSE)AIAEFVDKIQAI
CVVCGNPATRTQRLINGKPAFYDDPVVLIGA(MSE)ESYEARCRKCHVVPQ
MYRPKDHGWVEVIVGPMYSGKSEELIRRIRRAKIAKQKIQVFKPEIDNRYSKEDVVSHMGEKEQAVAIKNSREILKYFEE
DTEVIAIDEVQFFDDEIVEIVNKIAESGRRVICAGLDMDFRGKPFGPIPELMAIAEFVDKIQAICVVCGNPATRTQRLIN
GKPAFYDDPVVLIGAMESYEARCRKCHVVPQ
A,B
CaR26
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Clostridium
Clostridium acetobutylicum
ATCC 824
Escherichia
sample
272562
Clostridium acetobutylicum
562
Escherichia coli
BL21(DE3)+Magic
plasmid
pET21
1
1.95
37
VAPOR DIFFUSION, HANGING DROP
0.2M Na, K-citrate, P 20% EG3350, 2 mM ATP, 2 mM MgCl2, VAPOR DIFFUSION, HANGING DROP, temperature 293K
293
Northeast Structural Genomics Consortium
NESG
PSI, Protein Structure Initiative
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_related
pdbx_struct_conn_angle
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Source and taxonomy
Version format compliance
Data collection
Database references
Derived calculations
1
0
2004-12-21
1
1
2008-04-30
1
2
2011-07-13
1
3
2024-03-06
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_related.db_name
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.conn_type_id
_struct_conn.id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
RCSB
Y
RCSB
2004-11-04
REL
REL
ZN
ZINC ION
ADP
ADENOSINE-5'-DIPHOSPHATE
HOH
water
ZN
302
2
ZN
ZN
302
A
ADP
301
3
ADP
ADP
301
A
ZN
402
2
ZN
ZN
402
B
ADP
401
3
ADP
ADP
401
B
HOH
3
4
HOH
HOH
303
A
HOH
4
4
HOH
HOH
304
A
HOH
8
4
HOH
HOH
305
A
HOH
10
4
HOH
HOH
306
A
HOH
11
4
HOH
HOH
307
A
HOH
13
4
HOH
HOH
308
A
HOH
14
4
HOH
HOH
309
A
HOH
15
4
HOH
HOH
310
A
HOH
21
4
HOH
HOH
311
A
HOH
22
4
HOH
HOH
312
A
HOH
23
4
HOH
HOH
313
A
HOH
24
4
HOH
HOH
314
A
HOH
26
4
HOH
HOH
315
A
HOH
29
4
HOH
HOH
316
A
HOH
30
4
HOH
HOH
317
A
HOH
31
4
HOH
HOH
318
A
HOH
37
4
HOH
HOH
319
A
HOH
38
4
HOH
HOH
320
A
HOH
40
4
HOH
HOH
321
A
HOH
41
4
HOH
HOH
322
A
HOH
42
4
HOH
HOH
323
A
HOH
44
4
HOH
HOH
324
A
HOH
48
4
HOH
HOH
325
A
HOH
49
4
HOH
HOH
326
A
HOH
50
4
HOH
HOH
327
A
HOH
53
4
HOH
HOH
328
A
HOH
56
4
HOH
HOH
329
A
HOH
57
4
HOH
HOH
330
A
HOH
58
4
HOH
HOH
331
A
HOH
62
4
HOH
HOH
332
A
HOH
63
4
HOH
HOH
333
A
HOH
64
4
HOH
HOH
334
A
HOH
66
4
HOH
HOH
335
A
HOH
67
4
HOH
HOH
336
A
HOH
68
4
HOH
HOH
337
A
HOH
71
4
HOH
HOH
338
A
HOH
72
4
HOH
HOH
339
A
HOH
73
4
HOH
HOH
340
A
HOH
76
4
HOH
HOH
341
A
HOH
77
4
HOH
HOH
342
A
HOH
78
4
HOH
HOH
343
A
HOH
80
4
HOH
HOH
344
A
HOH
85
4
HOH
HOH
345
A
HOH
86
4
HOH
HOH
346
A
HOH
91
4
HOH
HOH
347
A
HOH
94
4
HOH
HOH
348
A
HOH
100
4
HOH
HOH
349
A
HOH
103
4
HOH
HOH
350
A
HOH
105
4
HOH
HOH
351
A
HOH
106
4
HOH
HOH
352
A
HOH
108
4
HOH
HOH
353
A
HOH
110
4
HOH
HOH
354
A
HOH
113
4
HOH
HOH
355
A
HOH
114
4
HOH
HOH
356
A
HOH
115
4
HOH
HOH
357
A
HOH
117
4
HOH
HOH
358
A
HOH
118
4
HOH
HOH
359
A
HOH
119
4
HOH
HOH
360
A
HOH
120
4
HOH
HOH
361
A
HOH
123
4
HOH
HOH
362
A
HOH
125
4
HOH
HOH
363
A
HOH
126
4
HOH
HOH
364
A
HOH
127
4
HOH
HOH
365
A
HOH
129
4
HOH
HOH
366
A
HOH
131
4
HOH
HOH
367
A
HOH
132
4
HOH
HOH
368
A
HOH
133
4
HOH
HOH
369
A
HOH
135
4
HOH
HOH
370
A
HOH
136
4
HOH
HOH
371
A
HOH
139
4
HOH
HOH
372
A
HOH
141
4
HOH
HOH
373
A
HOH
142
4
HOH
HOH
374
A
HOH
147
4
HOH
HOH
375
A
HOH
152
4
HOH
HOH
376
A
HOH
155
4
HOH
HOH
377
A
HOH
158
4
HOH
HOH
378
A
HOH
160
4
HOH
HOH
379
A
HOH
163
4
HOH
HOH
380
A
HOH
164
4
HOH
HOH
381
A
HOH
165
4
HOH
HOH
382
A
HOH
166
4
HOH
HOH
383
A
HOH
169
4
HOH
HOH
384
A
HOH
170
4
HOH
HOH
385
A
HOH
172
4
HOH
HOH
386
A
HOH
173
4
HOH
HOH
387
A
HOH
175
4
HOH
HOH
388
A
HOH
176
4
HOH
HOH
389
A
HOH
179
4
HOH
HOH
390
A
HOH
182
4
HOH
HOH
391
A
HOH
1
4
HOH
HOH
403
B
HOH
2
4
HOH
HOH
404
B
HOH
5
4
HOH
HOH
405
B
HOH
6
4
HOH
HOH
406
B
HOH
7
4
HOH
HOH
407
B
HOH
9
4
HOH
HOH
408
B
HOH
12
4
HOH
HOH
409
B
HOH
16
4
HOH
HOH
410
B
HOH
17
4
HOH
HOH
411
B
HOH
18
4
HOH
HOH
412
B
HOH
19
4
HOH
HOH
413
B
HOH
20
4
HOH
HOH
414
B
HOH
25
4
HOH
HOH
415
B
HOH
27
4
HOH
HOH
416
B
HOH
28
4
HOH
HOH
417
B
HOH
32
4
HOH
HOH
418
B
HOH
33
4
HOH
HOH
419
B
HOH
34
4
HOH
HOH
420
B
HOH
35
4
HOH
HOH
421
B
HOH
36
4
HOH
HOH
422
B
HOH
39
4
HOH
HOH
423
B
HOH
43
4
HOH
HOH
424
B
HOH
45
4
HOH
HOH
425
B
HOH
46
4
HOH
HOH
426
B
HOH
47
4
HOH
HOH
427
B
HOH
51
4
HOH
HOH
428
B
HOH
52
4
HOH
HOH
429
B
HOH
54
4
HOH
HOH
430
B
HOH
55
4
HOH
HOH
431
B
HOH
59
4
HOH
HOH
432
B
HOH
60
4
HOH
HOH
433
B
HOH
61
4
HOH
HOH
434
B
HOH
65
4
HOH
HOH
435
B
HOH
69
4
HOH
HOH
436
B
HOH
70
4
HOH
HOH
437
B
HOH
74
4
HOH
HOH
438
B
HOH
75
4
HOH
HOH
439
B
HOH
79
4
HOH
HOH
440
B
HOH
81
4
HOH
HOH
441
B
HOH
82
4
HOH
HOH
442
B
HOH
83
4
HOH
HOH
443
B
HOH
84
4
HOH
HOH
444
B
HOH
89
4
HOH
HOH
445
B
HOH
90
4
HOH
HOH
446
B
HOH
92
4
HOH
HOH
447
B
HOH
93
4
HOH
HOH
448
B
HOH
95
4
HOH
HOH
449
B
HOH
96
4
HOH
HOH
450
B
HOH
97
4
HOH
HOH
451
B
HOH
98
4
HOH
HOH
452
B
HOH
99
4
HOH
HOH
453
B
HOH
101
4
HOH
HOH
454
B
HOH
102
4
HOH
HOH
455
B
HOH
104
4
HOH
HOH
456
B
HOH
107
4
HOH
HOH
457
B
HOH
109
4
HOH
HOH
458
B
HOH
111
4
HOH
HOH
459
B
HOH
112
4
HOH
HOH
460
B
HOH
116
4
HOH
HOH
461
B
HOH
121
4
HOH
HOH
462
B
HOH
122
4
HOH
HOH
463
B
HOH
134
4
HOH
HOH
464
B
HOH
137
4
HOH
HOH
465
B
HOH
138
4
HOH
HOH
466
B
HOH
144
4
HOH
HOH
467
B
HOH
145
4
HOH
HOH
468
B
HOH
146
4
HOH
HOH
469
B
HOH
148
4
HOH
HOH
470
B
HOH
150
4
HOH
HOH
471
B
HOH
153
4
HOH
HOH
472
B
HOH
154
4
HOH
HOH
473
B
HOH
157
4
HOH
HOH
474
B
HOH
159
4
HOH
HOH
475
B
HOH
161
4
HOH
HOH
476
B
HOH
162
4
HOH
HOH
477
B
HOH
167
4
HOH
HOH
478
B
HOH
168
4
HOH
HOH
479
B
HOH
171
4
HOH
HOH
480
B
HOH
174
4
HOH
HOH
481
B
HOH
177
4
HOH
HOH
482
B
HOH
178
4
HOH
HOH
483
B
HOH
180
4
HOH
HOH
484
B
n
1
1
A
TYR
2
n
2
TYR
2
A
ARG
3
n
3
ARG
3
A
PRO
4
n
4
PRO
4
A
LYS
5
n
5
LYS
5
A
ASP
6
n
6
ASP
6
A
HIS
7
n
7
HIS
7
A
GLY
8
n
8
GLY
8
A
TRP
9
n
9
TRP
9
A
VAL
10
n
10
VAL
10
A
GLU
11
n
11
GLU
11
A
VAL
12
n
12
VAL
12
A
ILE
13
n
13
ILE
13
A
VAL
14
n
14
VAL
14
A
GLY
15
n
15
GLY
15
A
PRO
16
n
16
PRO
16
A
MSE
17
n
17
MSE
17
A
TYR
18
n
18
TYR
18
A
SER
19
n
19
SER
19
A
GLY
20
n
20
GLY
20
A
LYS
21
n
21
LYS
21
A
SER
22
n
22
SER
22
A
GLU
23
n
23
GLU
23
A
GLU
24
n
24
GLU
24
A
LEU
25
n
25
LEU
25
A
ILE
26
n
26
ILE
26
A
ARG
27
n
27
ARG
27
A
ARG
28
n
28
ARG
28
A
ILE
29
n
29
ILE
29
A
ARG
30
n
30
ARG
30
A
ARG
31
n
31
ARG
31
A
ALA
32
n
32
ALA
32
A
LYS
33
n
33
LYS
33
A
ILE
34
n
34
ILE
34
A
ALA
35
n
35
ALA
35
A
LYS
36
n
36
LYS
36
A
GLN
37
n
37
GLN
37
A
LYS
38
n
38
LYS
38
A
ILE
39
n
39
ILE
39
A
GLN
40
n
40
GLN
40
A
VAL
41
n
41
VAL
41
A
PHE
42
n
42
PHE
42
A
LYS
43
n
43
LYS
43
A
PRO
44
n
44
PRO
44
A
GLU
45
n
45
GLU
45
A
n
46
46
A
n
47
47
A
n
48
48
A
n
49
49
A
n
50
50
A
n
51
51
A
n
52
52
A
GLU
53
n
53
GLU
53
A
ASP
54
n
54
ASP
54
A
VAL
55
n
55
VAL
55
A
VAL
56
n
56
VAL
56
A
SER
57
n
57
SER
57
A
HIS
58
n
58
HIS
58
A
MSE
59
n
59
MSE
59
A
GLY
60
n
60
GLY
60
A
GLU
61
n
61
GLU
61
A
LYS
62
n
62
LYS
62
A
GLU
63
n
63
GLU
63
A
GLN
64
n
64
GLN
64
A
ALA
65
n
65
ALA
65
A
VAL
66
n
66
VAL
66
A
ALA
67
n
67
ALA
67
A
ILE
68
n
68
ILE
68
A
LYS
69
n
69
LYS
69
A
ASN
70
n
70
ASN
70
A
SER
71
n
71
SER
71
A
ARG
72
n
72
ARG
72
A
GLU
73
n
73
GLU
73
A
ILE
74
n
74
ILE
74
A
LEU
75
n
75
LEU
75
A
LYS
76
n
76
LYS
76
A
TYR
77
n
77
TYR
77
A
PHE
78
n
78
PHE
78
A
GLU
79
n
79
GLU
79
A
GLU
80
n
80
GLU
80
A
ASP
81
n
81
ASP
81
A
THR
82
n
82
THR
82
A
GLU
83
n
83
GLU
83
A
VAL
84
n
84
VAL
84
A
ILE
85
n
85
ILE
85
A
ALA
86
n
86
ALA
86
A
ILE
87
n
87
ILE
87
A
ASP
88
n
88
ASP
88
A
GLU
89
n
89
GLU
89
A
VAL
90
n
90
VAL
90
A
GLN
91
n
91
GLN
91
A
PHE
92
n
92
PHE
92
A
PHE
93
n
93
PHE
93
A
ASP
94
n
94
ASP
94
A
ASP
95
n
95
ASP
95
A
GLU
96
n
96
GLU
96
A
ILE
97
n
97
ILE
97
A
VAL
98
n
98
VAL
98
A
GLU
99
n
99
GLU
99
A
ILE
100
n
100
ILE
100
A
VAL
101
n
101
VAL
101
A
ASN
102
n
102
ASN
102
A
LYS
103
n
103
LYS
103
A
ILE
104
n
104
ILE
104
A
ALA
105
n
105
ALA
105
A
GLU
106
n
106
GLU
106
A
SER
107
n
107
SER
107
A
GLY
108
n
108
GLY
108
A
ARG
109
n
109
ARG
109
A
ARG
110
n
110
ARG
110
A
VAL
111
n
111
VAL
111
A
ILE
112
n
112
ILE
112
A
CYS
113
n
113
CYS
113
A
ALA
114
n
114
ALA
114
A
GLY
115
n
115
GLY
115
A
LEU
116
n
116
LEU
116
A
ASP
117
n
117
ASP
117
A
MSE
118
n
118
MSE
118
A
ASP
119
n
119
ASP
119
A
PHE
120
n
120
PHE
120
A
ARG
121
n
121
ARG
121
A
GLY
122
n
122
GLY
122
A
LYS
123
n
123
LYS
123
A
PRO
124
n
124
PRO
124
A
PHE
125
n
125
PHE
125
A
GLY
126
n
126
GLY
126
A
PRO
127
n
127
PRO
127
A
ILE
128
n
128
ILE
128
A
PRO
129
n
129
PRO
129
A
GLU
130
n
130
GLU
130
A
LEU
131
n
131
LEU
131
A
MSE
132
n
132
MSE
132
A
ALA
133
n
133
ALA
133
A
ILE
134
n
134
ILE
134
A
ALA
135
n
135
ALA
135
A
GLU
136
n
136
GLU
136
A
PHE
137
n
137
PHE
137
A
VAL
138
n
138
VAL
138
A
ASP
139
n
139
ASP
139
A
LYS
140
n
140
LYS
140
A
ILE
141
n
141
ILE
141
A
GLN
142
n
142
GLN
142
A
ALA
143
n
143
ALA
143
A
ILE
144
n
144
ILE
144
A
CYS
145
n
145
CYS
145
A
VAL
146
n
146
VAL
146
A
VAL
147
n
147
VAL
147
A
CYS
148
n
148
CYS
148
A
GLY
149
n
149
GLY
149
A
ASN
150
n
150
ASN
150
A
PRO
151
n
151
PRO
151
A
ALA
152
n
152
ALA
152
A
THR
153
n
153
THR
153
A
ARG
154
n
154
ARG
154
A
THR
155
n
155
THR
155
A
GLN
156
n
156
GLN
156
A
ARG
157
n
157
ARG
157
A
LEU
158
n
158
LEU
158
A
ILE
159
n
159
ILE
159
A
ASN
160
n
160
ASN
160
A
GLY
161
n
161
GLY
161
A
LYS
162
n
162
LYS
162
A
PRO
163
n
163
PRO
163
A
ALA
164
n
164
ALA
164
A
PHE
165
n
165
PHE
165
A
TYR
166
n
166
TYR
166
A
ASP
167
n
167
ASP
167
A
ASP
168
n
168
ASP
168
A
PRO
169
n
169
PRO
169
A
VAL
170
n
170
VAL
170
A
n
171
171
A
n
172
172
A
n
173
173
A
n
174
174
A
n
175
175
A
MSE
176
n
176
MSE
176
A
GLU
177
n
177
GLU
177
A
SER
178
n
178
SER
178
A
TYR
179
n
179
TYR
179
A
GLU
180
n
180
GLU
180
A
ALA
181
n
181
ALA
181
A
ARG
182
n
182
ARG
182
A
CYS
183
n
183
CYS
183
A
ARG
184
n
184
ARG
184
A
LYS
185
n
185
LYS
185
A
CYS
186
n
186
CYS
186
A
HIS
187
n
187
HIS
187
A
VAL
188
n
188
VAL
188
A
VAL
189
n
189
VAL
189
A
PRO
190
n
190
PRO
190
A
GLN
191
n
191
GLN
191
A
n
1
1
B
TYR
2
n
2
TYR
2
B
ARG
3
n
3
ARG
3
B
PRO
4
n
4
PRO
4
B
LYS
5
n
5
LYS
5
B
ASP
6
n
6
ASP
6
B
HIS
7
n
7
HIS
7
B
GLY
8
n
8
GLY
8
B
TRP
9
n
9
TRP
9
B
VAL
10
n
10
VAL
10
B
GLU
11
n
11
GLU
11
B
VAL
12
n
12
VAL
12
B
ILE
13
n
13
ILE
13
B
VAL
14
n
14
VAL
14
B
GLY
15
n
15
GLY
15
B
PRO
16
n
16
PRO
16
B
MSE
17
n
17
MSE
17
B
TYR
18
n
18
TYR
18
B
SER
19
n
19
SER
19
B
GLY
20
n
20
GLY
20
B
LYS
21
n
21
LYS
21
B
SER
22
n
22
SER
22
B
GLU
23
n
23
GLU
23
B
GLU
24
n
24
GLU
24
B
LEU
25
n
25
LEU
25
B
ILE
26
n
26
ILE
26
B
ARG
27
n
27
ARG
27
B
ARG
28
n
28
ARG
28
B
ILE
29
n
29
ILE
29
B
ARG
30
n
30
ARG
30
B
ARG
31
n
31
ARG
31
B
ALA
32
n
32
ALA
32
B
LYS
33
n
33
LYS
33
B
ILE
34
n
34
ILE
34
B
ALA
35
n
35
ALA
35
B
LYS
36
n
36
LYS
36
B
GLN
37
n
37
GLN
37
B
LYS
38
n
38
LYS
38
B
ILE
39
n
39
ILE
39
B
GLN
40
n
40
GLN
40
B
VAL
41
n
41
VAL
41
B
PHE
42
n
42
PHE
42
B
LYS
43
n
43
LYS
43
B
PRO
44
n
44
PRO
44
B
GLU
45
n
45
GLU
45
B
n
46
46
B
n
47
47
B
n
48
48
B
n
49
49
B
n
50
50
B
n
51
51
B
n
52
52
B
n
53
53
B
n
54
54
B
n
55
55
B
n
56
56
B
n
57
57
B
n
58
58
B
n
59
59
B
n
60
60
B
n
61
61
B
n
62
62
B
n
63
63
B
n
64
64
B
ALA
65
n
65
ALA
65
B
VAL
66
n
66
VAL
66
B
ALA
67
n
67
ALA
67
B
ILE
68
n
68
ILE
68
B
LYS
69
n
69
LYS
69
B
ASN
70
n
70
ASN
70
B
SER
71
n
71
SER
71
B
ARG
72
n
72
ARG
72
B
GLU
73
n
73
GLU
73
B
ILE
74
n
74
ILE
74
B
LEU
75
n
75
LEU
75
B
LYS
76
n
76
LYS
76
B
TYR
77
n
77
TYR
77
B
PHE
78
n
78
PHE
78
B
GLU
79
n
79
GLU
79
B
GLU
80
n
80
GLU
80
B
ASP
81
n
81
ASP
81
B
THR
82
n
82
THR
82
B
GLU
83
n
83
GLU
83
B
VAL
84
n
84
VAL
84
B
ILE
85
n
85
ILE
85
B
ALA
86
n
86
ALA
86
B
ILE
87
n
87
ILE
87
B
ASP
88
n
88
ASP
88
B
GLU
89
n
89
GLU
89
B
VAL
90
n
90
VAL
90
B
GLN
91
n
91
GLN
91
B
PHE
92
n
92
PHE
92
B
PHE
93
n
93
PHE
93
B
ASP
94
n
94
ASP
94
B
ASP
95
n
95
ASP
95
B
GLU
96
n
96
GLU
96
B
ILE
97
n
97
ILE
97
B
VAL
98
n
98
VAL
98
B
GLU
99
n
99
GLU
99
B
ILE
100
n
100
ILE
100
B
VAL
101
n
101
VAL
101
B
ASN
102
n
102
ASN
102
B
LYS
103
n
103
LYS
103
B
ILE
104
n
104
ILE
104
B
ALA
105
n
105
ALA
105
B
GLU
106
n
106
GLU
106
B
SER
107
n
107
SER
107
B
GLY
108
n
108
GLY
108
B
ARG
109
n
109
ARG
109
B
ARG
110
n
110
ARG
110
B
VAL
111
n
111
VAL
111
B
ILE
112
n
112
ILE
112
B
CYS
113
n
113
CYS
113
B
ALA
114
n
114
ALA
114
B
GLY
115
n
115
GLY
115
B
LEU
116
n
116
LEU
116
B
ASP
117
n
117
ASP
117
B
MSE
118
n
118
MSE
118
B
ASP
119
n
119
ASP
119
B
PHE
120
n
120
PHE
120
B
ARG
121
n
121
ARG
121
B
GLY
122
n
122
GLY
122
B
LYS
123
n
123
LYS
123
B
PRO
124
n
124
PRO
124
B
PHE
125
n
125
PHE
125
B
GLY
126
n
126
GLY
126
B
PRO
127
n
127
PRO
127
B
ILE
128
n
128
ILE
128
B
PRO
129
n
129
PRO
129
B
GLU
130
n
130
GLU
130
B
LEU
131
n
131
LEU
131
B
MSE
132
n
132
MSE
132
B
ALA
133
n
133
ALA
133
B
ILE
134
n
134
ILE
134
B
ALA
135
n
135
ALA
135
B
GLU
136
n
136
GLU
136
B
PHE
137
n
137
PHE
137
B
VAL
138
n
138
VAL
138
B
ASP
139
n
139
ASP
139
B
LYS
140
n
140
LYS
140
B
ILE
141
n
141
ILE
141
B
GLN
142
n
142
GLN
142
B
ALA
143
n
143
ALA
143
B
ILE
144
n
144
ILE
144
B
CYS
145
n
145
CYS
145
B
VAL
146
n
146
VAL
146
B
VAL
147
n
147
VAL
147
B
CYS
148
n
148
CYS
148
B
GLY
149
n
149
GLY
149
B
ASN
150
n
150
ASN
150
B
PRO
151
n
151
PRO
151
B
ALA
152
n
152
ALA
152
B
THR
153
n
153
THR
153
B
ARG
154
n
154
ARG
154
B
THR
155
n
155
THR
155
B
GLN
156
n
156
GLN
156
B
ARG
157
n
157
ARG
157
B
LEU
158
n
158
LEU
158
B
ILE
159
n
159
ILE
159
B
ASN
160
n
160
ASN
160
B
GLY
161
n
161
GLY
161
B
LYS
162
n
162
LYS
162
B
PRO
163
n
163
PRO
163
B
ALA
164
n
164
ALA
164
B
PHE
165
n
165
PHE
165
B
TYR
166
n
166
TYR
166
B
ASP
167
n
167
ASP
167
B
ASP
168
n
168
ASP
168
B
PRO
169
n
169
PRO
169
B
VAL
170
n
170
VAL
170
B
n
171
171
B
n
172
172
B
n
173
173
B
n
174
174
B
n
175
175
B
MSE
176
n
176
MSE
176
B
GLU
177
n
177
GLU
177
B
SER
178
n
178
SER
178
B
TYR
179
n
179
TYR
179
B
GLU
180
n
180
GLU
180
B
ALA
181
n
181
ALA
181
B
ARG
182
n
182
ARG
182
B
CYS
183
n
183
CYS
183
B
ARG
184
n
184
ARG
184
B
LYS
185
n
185
LYS
185
B
CYS
186
n
186
CYS
186
B
HIS
187
n
187
HIS
187
B
VAL
188
n
188
VAL
188
B
VAL
189
n
189
VAL
189
B
PRO
190
n
190
PRO
190
B
GLN
191
n
191
GLN
191
B
author_and_software_defined_assembly
PISA
2
dimeric
software_defined_assembly
PISA
4
tetrameric
3750
-20
16860
10950
-43
30280
A
CYS
145
A
SG
CYS
145
1_555
A
ZN
302
C
ZN
ZN
1_555
A
CYS
148
A
SG
CYS
148
1_555
112.8
A
CYS
145
A
SG
CYS
145
1_555
A
ZN
302
C
ZN
ZN
1_555
A
CYS
183
A
SG
CYS
183
1_555
114.5
A
CYS
148
A
SG
CYS
148
1_555
A
ZN
302
C
ZN
ZN
1_555
A
CYS
183
A
SG
CYS
183
1_555
113.5
A
CYS
145
A
SG
CYS
145
1_555
A
ZN
302
C
ZN
ZN
1_555
A
CYS
186
A
SG
CYS
186
1_555
102.7
A
CYS
148
A
SG
CYS
148
1_555
A
ZN
302
C
ZN
ZN
1_555
A
CYS
186
A
SG
CYS
186
1_555
111.9
A
CYS
183
A
SG
CYS
183
1_555
A
ZN
302
C
ZN
ZN
1_555
A
CYS
186
A
SG
CYS
186
1_555
100.2
B
CYS
145
B
SG
CYS
145
1_555
B
ZN
402
E
ZN
ZN
1_555
B
CYS
148
B
SG
CYS
148
1_555
118.0
B
CYS
145
B
SG
CYS
145
1_555
B
ZN
402
E
ZN
ZN
1_555
B
CYS
183
B
SG
CYS
183
1_555
122.9
B
CYS
148
B
SG
CYS
148
1_555
B
ZN
402
E
ZN
ZN
1_555
B
CYS
183
B
SG
CYS
183
1_555
115.0
B
CYS
145
B
SG
CYS
145
1_555
B
ZN
402
E
ZN
ZN
1_555
B
CYS
186
B
SG
CYS
186
1_555
118.2
B
CYS
148
B
SG
CYS
148
1_555
B
ZN
402
E
ZN
ZN
1_555
B
CYS
186
B
SG
CYS
186
1_555
116.2
B
CYS
183
B
SG
CYS
183
1_555
B
ZN
402
E
ZN
ZN
1_555
B
CYS
186
B
SG
CYS
186
1_555
47.6
A
MSE
17
SELENOMETHIONINE
A
MSE
17
MET
A
MSE
59
SELENOMETHIONINE
A
MSE
59
MET
A
MSE
118
SELENOMETHIONINE
A
MSE
118
MET
A
MSE
132
SELENOMETHIONINE
A
MSE
132
MET
A
MSE
176
SELENOMETHIONINE
A
MSE
176
MET
B
MSE
17
SELENOMETHIONINE
B
MSE
17
MET
B
MSE
118
SELENOMETHIONINE
B
MSE
118
MET
B
MSE
132
SELENOMETHIONINE
B
MSE
132
MET
B
MSE
176
SELENOMETHIONINE
B
MSE
176
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_665
-x+1,-y+1,z
crystal symmetry operation
53.7930000000
67.1660000000
0.0000000000
A
O
ILE
68
A
O
ILE
68
A
N
LYS
43
A
N
LYS
43
A
N
PHE
42
A
N
PHE
42
A
O
ALA
86
A
O
ALA
86
A
N
ILE
87
A
N
ILE
87
A
O
ILE
112
A
O
ILE
112
A
O
CYS
113
A
O
CYS
113
A
N
GLU
11
A
N
GLU
11
A
N
VAL
12
A
N
VAL
12
A
O
PHE
137
A
O
PHE
137
A
N
VAL
55
A
N
VAL
55
A
O
GLU
63
A
O
GLU
63
A
N
ALA
143
A
N
ALA
143
A
O
ALA
152
A
O
ALA
152
A
O
LYS
162
A
O
LYS
162
A
N
ILE
159
A
N
ILE
159
A
N
GLN
156
A
N
GLN
156
A
O
GLU
180
A
O
GLU
180
B
O
VAL
66
B
O
VAL
66
B
N
LYS
43
B
N
LYS
43
B
N
GLN
40
B
N
GLN
40
B
O
ALA
86
B
O
ALA
86
B
N
ILE
87
B
N
ILE
87
B
O
ILE
112
B
O
ILE
112
B
O
CYS
113
B
O
CYS
113
B
N
GLU
11
B
N
GLU
11
B
N
VAL
12
B
N
VAL
12
B
O
PHE
137
B
O
PHE
137
B
N
ALA
143
B
N
ALA
143
B
O
ALA
152
B
O
ALA
152
B
O
LYS
162
B
O
LYS
162
B
N
ILE
159
B
N
ILE
159
B
N
GLN
156
B
N
GLN
156
B
O
GLU
180
B
O
GLU
180
1
A
MET
1
A
MET
1
1
Y
1
A
ILE
46
A
ILE
46
1
Y
1
A
ASP
47
A
ASP
47
1
Y
1
A
ASN
48
A
ASN
48
1
Y
1
A
ARG
49
A
ARG
49
1
Y
1
A
TYR
50
A
TYR
50
1
Y
1
A
SER
51
A
SER
51
1
Y
1
A
LYS
52
A
LYS
52
1
Y
1
A
VAL
171
A
VAL
171
1
Y
1
A
LEU
172
A
LEU
172
1
Y
1
A
ILE
173
A
ILE
173
1
Y
1
A
GLY
174
A
GLY
174
1
Y
1
A
ALA
175
A
ALA
175
1
Y
1
B
MET
1
B
MET
1
1
Y
1
B
ILE
46
B
ILE
46
1
Y
1
B
ASP
47
B
ASP
47
1
Y
1
B
ASN
48
B
ASN
48
1
Y
1
B
ARG
49
B
ARG
49
1
Y
1
B
TYR
50
B
TYR
50
1
Y
1
B
SER
51
B
SER
51
1
Y
1
B
LYS
52
B
LYS
52
1
Y
1
B
GLU
53
B
GLU
53
1
Y
1
B
ASP
54
B
ASP
54
1
Y
1
B
VAL
55
B
VAL
55
1
Y
1
B
VAL
56
B
VAL
56
1
Y
1
B
SER
57
B
SER
57
1
Y
1
B
HIS
58
B
HIS
58
1
Y
1
B
MSE
59
B
MSE
59
1
Y
1
B
GLY
60
B
GLY
60
1
Y
1
B
GLU
61
B
GLU
61
1
Y
1
B
LYS
62
B
LYS
62
1
Y
1
B
GLU
63
B
GLU
63
1
Y
1
B
GLN
64
B
GLN
64
1
Y
1
B
VAL
171
B
VAL
171
1
Y
1
B
LEU
172
B
LEU
172
1
Y
1
B
ILE
173
B
ILE
173
1
Y
1
B
GLY
174
B
GLY
174
1
Y
1
B
ALA
175
B
ALA
175
1
Y
1
A
ALA
143
-102.72
-167.90
1
A
ASP
167
-80.37
44.19
1
A
PRO
169
-63.68
-166.72
1
B
LYS
69
-82.59
-125.15
1
B
ASN
70
-54.54
-177.18
1
B
ALA
143
-102.31
-167.15
1
B
ASP
167
-99.01
31.44
PROTEIN_REP.PARAM
PROTEIN.TOP
DNA-RNA-REP.PARAM
DNA-RNA.TOP
WATER_REP.PARAM
WATER.TOP
ION.PARAM
ION.TOP
ADP.PARAM
ADP.TOP
33.2
-3.980
0.00
0.00
-6.115
0.00
10.095
0.266
0.006
0.241
0.241
2.00
28.49
2079
42063
4.9
85.7
RANDOM
274236.17
0.000000
1
RESTRAINED
THROUGHOUT
2.0
SAD
Engh & Huber
FLAT MODEL
53.5863
0.375383
0.32
0.28
5.00
0.24
0.16
2.00
28.49
171
2988
56
0
2761
0.007
1.2
23.5
0.80
1.520
1.5
2.474
2.0
2.345
2.0
3.395
2.5
0.295
0.018
0.249
2.13
258
5491
6
4.5
70.5
24.4
2.0
30
1XX6
48667
-3.0
0.082
1
27.3
8.5
99.2
0.362
2.00
2.07
5.1
1
99.2
refinement
CNS
1.1
data reduction
DENZO
data scaling
SCALEPACK
phasing
SOLVE
X-ray structure of Clostridium acetobutylicum thymidine kinase with ADP. Northeast Structural Genomics Target CAR26.
1
N
N
1
N
N
2
N
N
3
N
N
2
N
N
3
N
N
4
N
N
4
N
N
A
GLY
20
A
GLY
20
HELX_P
A
ALA
35
A
ALA
35
1
1
16
A
ARG
72
A
ARG
72
HELX_P
A
PHE
78
A
PHE
78
1
2
7
A
GLU
89
A
GLU
89
HELX_P
A
PHE
93
A
PHE
93
5
3
5
A
ASP
94
A
ASP
94
HELX_P
A
ASP
95
A
ASP
95
5
4
2
A
GLU
96
A
GLU
96
HELX_P
A
SER
107
A
SER
107
1
5
12
A
PRO
127
A
PRO
127
HELX_P
A
ALA
135
A
ALA
135
1
6
9
B
GLY
20
B
GLY
20
HELX_P
B
ALA
35
B
ALA
35
1
7
16
B
ARG
72
B
ARG
72
HELX_P
B
PHE
78
B
PHE
78
1
8
7
B
GLU
89
B
GLU
89
HELX_P
B
ASP
94
B
ASP
94
5
9
6
B
ASP
95
B
ASP
95
HELX_P
B
SER
107
B
SER
107
1
10
13
B
PRO
127
B
PRO
127
HELX_P
B
ALA
135
B
ALA
135
1
11
9
disulf
2.072
B
CYS
183
B
SG
CYS
183
1_555
B
CYS
186
B
SG
CYS
186
1_555
covale
1.328
both
A
PRO
16
A
C
PRO
16
1_555
A
MSE
17
A
N
MSE
17
1_555
covale
1.329
both
A
MSE
17
A
C
MSE
17
1_555
A
TYR
18
A
N
TYR
18
1_555
covale
1.329
both
A
HIS
58
A
C
HIS
58
1_555
A
MSE
59
A
N
MSE
59
1_555
covale
1.331
both
A
MSE
59
A
C
MSE
59
1_555
A
GLY
60
A
N
GLY
60
1_555
covale
1.336
both
A
ASP
117
A
C
ASP
117
1_555
A
MSE
118
A
N
MSE
118
1_555
covale
1.332
both
A
MSE
118
A
C
MSE
118
1_555
A
ASP
119
A
N
ASP
119
1_555
covale
1.330
both
A
LEU
131
A
C
LEU
131
1_555
A
MSE
132
A
N
MSE
132
1_555
covale
1.330
both
A
MSE
132
A
C
MSE
132
1_555
A
ALA
133
A
N
ALA
133
1_555
covale
1.329
both
A
MSE
176
A
C
MSE
176
1_555
A
GLU
177
A
N
GLU
177
1_555
covale
1.326
both
B
PRO
16
B
C
PRO
16
1_555
B
MSE
17
B
N
MSE
17
1_555
covale
1.331
both
B
MSE
17
B
C
MSE
17
1_555
B
TYR
18
B
N
TYR
18
1_555
covale
1.334
both
B
ASP
117
B
C
ASP
117
1_555
B
MSE
118
B
N
MSE
118
1_555
covale
1.338
both
B
MSE
118
B
C
MSE
118
1_555
B
ASP
119
B
N
ASP
119
1_555
covale
1.329
both
B
LEU
131
B
C
LEU
131
1_555
B
MSE
132
B
N
MSE
132
1_555
covale
1.330
both
B
MSE
132
B
C
MSE
132
1_555
B
ALA
133
B
N
ALA
133
1_555
covale
1.328
both
B
MSE
176
B
C
MSE
176
1_555
B
GLU
177
B
N
GLU
177
1_555
metalc
2.510
A
CYS
145
A
SG
CYS
145
1_555
A
ZN
302
C
ZN
ZN
1_555
metalc
2.416
A
CYS
148
A
SG
CYS
148
1_555
A
ZN
302
C
ZN
ZN
1_555
metalc
2.362
A
CYS
183
A
SG
CYS
183
1_555
A
ZN
302
C
ZN
ZN
1_555
metalc
2.394
A
CYS
186
A
SG
CYS
186
1_555
A
ZN
302
C
ZN
ZN
1_555
metalc
2.359
B
CYS
145
B
SG
CYS
145
1_555
B
ZN
402
E
ZN
ZN
1_555
metalc
2.372
B
CYS
148
B
SG
CYS
148
1_555
B
ZN
402
E
ZN
ZN
1_555
metalc
2.792
B
CYS
183
B
SG
CYS
183
1_555
B
ZN
402
E
ZN
ZN
1_555
metalc
2.084
B
CYS
186
B
SG
CYS
186
1_555
B
ZN
402
E
ZN
ZN
1_555
TRANSFERASE
NESG, Northeast Structural Genomics Consortium, Protein Structure Initiative, PSI, Structural Genomics, DNA synthesis, kinase, transferase, thymidine
KITH_CLOAB
UNP
1
1
Q97F65
MYRPKDHGWVEVIVGPMYSGKSEELIRRIRRAKIAKQKIQVFKPEIDNRYSKEDVVSHMGEKEQAVAIKNSREILKYFEE
DTEVIAIDEVQFFDDEIVEIVNKIAESGRRVICAGLDMDFRGKPFGPIPELMAIAEFVDKIQAICVVCGNPATRTQRLIN
GKPAFYDDPVVLIGAMESYEARCRKCHVVPQ
1
191
1XX6
1
191
Q97F65
A
1
1
191
1
191
1XX6
1
191
Q97F65
B
1
1
191
1
MET
modified residue
MSE
17
1XX6
A
Q97F65
UNP
17
17
1
MET
modified residue
MSE
59
1XX6
A
Q97F65
UNP
59
59
1
MET
modified residue
MSE
118
1XX6
A
Q97F65
UNP
118
118
1
MET
modified residue
MSE
132
1XX6
A
Q97F65
UNP
132
132
1
MET
modified residue
MSE
176
1XX6
A
Q97F65
UNP
176
176
2
MET
modified residue
MSE
17
1XX6
B
Q97F65
UNP
17
17
2
MET
modified residue
MSE
59
1XX6
B
Q97F65
UNP
59
59
2
MET
modified residue
MSE
118
1XX6
B
Q97F65
UNP
118
118
2
MET
modified residue
MSE
132
1XX6
B
Q97F65
UNP
132
132
2
MET
modified residue
MSE
176
1XX6
B
Q97F65
UNP
176
176
6
2
2
3
6
2
3
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
A
VAL
66
A
VAL
66
A
ILE
68
A
ILE
68
A
ILE
39
A
ILE
39
A
PRO
44
A
PRO
44
A
VAL
84
A
VAL
84
A
ILE
87
A
ILE
87
A
ARG
110
A
ARG
110
A
GLY
115
A
GLY
115
A
TRP
9
A
TRP
9
A
VAL
14
A
VAL
14
A
PHE
137
A
PHE
137
A
LYS
140
A
LYS
140
A
ASP
54
A
ASP
54
A
VAL
56
A
VAL
56
A
LYS
62
A
LYS
62
A
GLN
64
A
GLN
64
A
ALA
143
A
ALA
143
A
ILE
144
A
ILE
144
A
PRO
151
A
PRO
151
A
ALA
152
A
ALA
152
A
LYS
162
A
LYS
162
A
PRO
163
A
PRO
163
A
ARG
154
A
ARG
154
A
ILE
159
A
ILE
159
A
GLU
177
A
GLU
177
A
ARG
182
A
ARG
182
B
VAL
66
B
VAL
66
B
ALA
67
B
ALA
67
B
ILE
39
B
ILE
39
B
LYS
43
B
LYS
43
B
VAL
84
B
VAL
84
B
ILE
87
B
ILE
87
B
ARG
110
B
ARG
110
B
GLY
115
B
GLY
115
B
TRP
9
B
TRP
9
B
VAL
14
B
VAL
14
B
PHE
137
B
PHE
137
B
LYS
140
B
LYS
140
B
ALA
143
B
ALA
143
B
ILE
144
B
ILE
144
B
PRO
151
B
PRO
151
B
ALA
152
B
ALA
152
B
LYS
162
B
LYS
162
B
PRO
163
B
PRO
163
B
ARG
154
B
ARG
154
B
ILE
159
B
ILE
159
B
GLU
177
B
GLU
177
B
ARG
182
B
ARG
182
BINDING SITE FOR RESIDUE ZN A 302
A
ZN
302
Software
4
BINDING SITE FOR RESIDUE ZN B 402
B
ZN
402
Software
4
BINDING SITE FOR RESIDUE ADP A 301
A
ADP
301
Software
17
BINDING SITE FOR RESIDUE ADP B 401
B
ADP
401
Software
12
A
CYS
145
A
CYS
145
4
1_555
A
CYS
148
A
CYS
148
4
1_555
A
CYS
183
A
CYS
183
4
1_555
A
CYS
186
A
CYS
186
4
1_555
B
CYS
145
B
CYS
145
4
1_555
B
CYS
148
B
CYS
148
4
1_555
B
CYS
183
B
CYS
183
4
1_555
B
CYS
186
B
CYS
186
4
1_555
A
TYR
18
A
TYR
18
17
1_555
A
SER
19
A
SER
19
17
1_555
A
GLY
20
A
GLY
20
17
1_555
A
LYS
21
A
LYS
21
17
1_555
A
SER
22
A
SER
22
17
1_555
A
GLU
23
A
GLU
23
17
1_555
A
SER
57
A
SER
57
17
1_555
A
HIS
58
A
HIS
58
17
1_555
A
MSE
59
A
MSE
59
17
1_555
A
ALA
143
A
ALA
143
17
1_555
A
ILE
144
A
ILE
144
17
1_555
A
HOH
313
G
HOH
17
1_555
A
HOH
322
G
HOH
17
1_555
A
HOH
331
G
HOH
17
1_555
A
HOH
334
G
HOH
17
1_555
A
HOH
335
G
HOH
17
1_555
B
ILE
34
B
ILE
34
17
2_665
A
ILE
34
A
ILE
34
12
2_665
B
TYR
18
B
TYR
18
12
1_555
B
SER
19
B
SER
19
12
1_555
B
GLY
20
B
GLY
20
12
1_555
B
LYS
21
B
LYS
21
12
1_555
B
SER
22
B
SER
22
12
1_555
B
GLU
23
B
GLU
23
12
1_555
B
ALA
143
B
ALA
143
12
1_555
B
ILE
144
B
ILE
144
12
1_555
B
VAL
146
B
VAL
146
12
1_555
B
HOH
405
H
HOH
12
1_555
B
HOH
424
H
HOH
12
1_555
18
P 21 21 2