0.012638
0.000000
0.000000
0.000000
0.012638
0.000000
0.000000
0.000000
0.026461
0.00000
0.00000
0.00000
Deshpande, A.
Nimsadkar, S.
Mande, S.C.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
79.128
79.128
37.791
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Cl -1
35.453
CHLORIDE ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Na 1
22.990
SODIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C5 H10 O
86.132
PENTANAL
non-polymer
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
CL
N
75
N
N
N
76
R
C
N
77
N
C
N
78
N
O
N
79
N
C
N
80
N
S
N
81
N
O
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
N
N
90
S
C
N
91
N
C
N
92
N
O
N
93
N
C
N
94
N
C
N
95
N
C
N
96
N
O
N
97
N
N
N
98
N
O
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
N
N
110
S
C
N
111
N
C
N
112
N
O
N
113
N
C
N
114
N
C
N
115
N
C
N
116
N
O
N
117
N
O
N
118
N
O
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
N
N
129
N
C
N
130
N
C
N
131
N
O
N
132
N
O
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
N
N
139
S
C
N
140
N
C
N
141
N
O
N
142
N
C
Y
143
N
C
Y
144
N
N
Y
145
N
C
Y
146
N
C
Y
147
N
N
N
148
N
O
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
O
N
160
N
H
N
161
N
H
N
162
N
N
N
163
S
C
N
164
N
C
N
165
N
O
N
166
S
C
N
167
N
C
N
168
N
C
N
169
N
C
N
170
N
O
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
N
N
185
S
C
N
186
N
C
N
187
N
O
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
C
N
192
N
O
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
N
N
207
S
C
N
208
N
C
N
209
N
O
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
C
N
214
N
N
N
215
N
O
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
N
N
232
S
C
N
233
N
C
N
234
N
O
N
235
N
C
N
236
N
C
N
237
N
S
N
238
N
C
N
239
N
O
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
NA
N
252
N
N
N
253
S
C
N
254
N
C
N
255
N
O
N
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
Y
261
N
C
Y
262
N
C
N
263
N
O
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
N
N
276
S
C
N
277
N
C
N
278
N
O
N
279
N
C
N
280
N
C
N
281
N
C
N
282
N
O
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
C
N
296
N
C
N
297
N
C
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
N
N
309
S
C
N
310
N
C
N
311
N
O
N
312
N
C
N
313
N
O
N
314
N
O
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
N
N
323
S
C
N
324
N
C
N
325
N
O
N
326
R
C
N
327
N
O
N
328
N
C
N
329
N
O
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
N
N
340
S
C
N
341
N
C
N
342
N
O
N
343
N
C
Y
344
N
C
Y
345
N
C
Y
346
N
C
Y
347
N
N
Y
348
N
C
Y
349
N
C
Y
350
N
C
Y
351
N
C
Y
352
N
C
N
353
N
O
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
N
N
367
S
C
N
368
N
C
N
369
N
O
N
370
N
C
Y
371
N
C
Y
372
N
C
Y
373
N
C
Y
374
N
C
Y
375
N
C
Y
376
N
C
N
377
N
O
N
378
N
O
N
379
N
H
N
380
N
H
N
381
N
H
N
382
N
H
N
383
N
H
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
N
N
391
S
C
N
392
N
C
N
393
N
O
N
394
N
C
N
395
N
C
N
396
N
C
N
397
N
O
N
398
N
H
N
399
N
H
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
doub
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
doub
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
doub
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
doub
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
Y
332
N
doub
Y
333
N
sing
Y
334
N
sing
N
335
N
sing
Y
336
N
doub
Y
337
N
sing
Y
338
N
sing
N
339
N
sing
Y
340
N
sing
Y
341
N
doub
N
342
N
sing
Y
343
N
doub
N
344
N
sing
Y
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
doub
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
Y
360
N
doub
Y
361
N
sing
Y
362
N
sing
N
363
N
sing
Y
364
N
doub
N
365
N
sing
Y
366
N
doub
N
367
N
sing
Y
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
doub
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
61
1005
1008
10.1107/S0907444905009364
15983424
Effect of alcohols on protein hydration: crystallographic analysis of hen egg-white lysozyme in the presence of alcohols.
2005
10.2210/pdb1ykz/pdb
pdb_00001ykz
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
298
1
IMAGE PLATE
2004-05-08
MAR scanner 345 mm plate
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU
14331.160
Lysozyme C
3.2.1.17
1
nat
polymer
22.990
SODIUM ION
1
syn
non-polymer
35.453
CHLORIDE ION
1
syn
non-polymer
86.132
PENTANAL
2
syn
non-polymer
18.015
water
77
nat
water
1,4-beta-N-acetylmuramidase C, Allergen Gal d 4, Gal d IV
no
no
KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC
SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC
SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
X
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
chicken
Gallus
sample
9031
Gallus gallus
1
2.11
41.32
VAPOR DIFFUSION, HANGING DROP
4.6
sodium choride, sodium acetate buffer, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Refinement description
1
0
2005-07-05
1
1
2008-04-30
1
2
2011-07-13
1
3
2023-10-25
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
the same protein with ethanol
the same protein with 1-butanol
the same protein with isopropyl alcohol
the same protein with isopropyl trifluoroethanol
RCSB
Y
PDBJ
2005-01-18
REL
REL
NA
SODIUM ION
CL
CHLORIDE ION
PTL
PENTANAL
HOH
water
2LYM
PDB
experimental model
NA
76
2
NA
NA
1076
X
CL
37
3
CL
CL
1037
X
PTL
3784
4
PTL
PTL
3784
X
PTL
3785
4
PTL
PTL
3785
X
WAT
2
5
HOH
HOH
3786
X
WAT
3
5
HOH
HOH
3787
X
WAT
4
5
HOH
HOH
3788
X
WAT
5
5
HOH
HOH
3789
X
WAT
6
5
HOH
HOH
3790
X
WAT
7
5
HOH
HOH
3791
X
WAT
8
5
HOH
HOH
3792
X
WAT
9
5
HOH
HOH
3793
X
WAT
10
5
HOH
HOH
3794
X
WAT
11
5
HOH
HOH
3795
X
WAT
12
5
HOH
HOH
3796
X
WAT
13
5
HOH
HOH
3797
X
WAT
14
5
HOH
HOH
3798
X
WAT
15
5
HOH
HOH
3799
X
WAT
16
5
HOH
HOH
3800
X
WAT
17
5
HOH
HOH
3801
X
WAT
18
5
HOH
HOH
3802
X
WAT
19
5
HOH
HOH
3803
X
WAT
20
5
HOH
HOH
3804
X
WAT
21
5
HOH
HOH
3805
X
WAT
22
5
HOH
HOH
3806
X
WAT
23
5
HOH
HOH
3807
X
WAT
24
5
HOH
HOH
3808
X
WAT
25
5
HOH
HOH
3809
X
WAT
26
5
HOH
HOH
3810
X
WAT
27
5
HOH
HOH
3811
X
WAT
28
5
HOH
HOH
3812
X
WAT
29
5
HOH
HOH
3813
X
WAT
30
5
HOH
HOH
3814
X
WAT
31
5
HOH
HOH
3815
X
WAT
32
5
HOH
HOH
3816
X
WAT
33
5
HOH
HOH
3817
X
WAT
34
5
HOH
HOH
3818
X
WAT
35
5
HOH
HOH
3819
X
WAT
37
5
HOH
HOH
3820
X
WAT
38
5
HOH
HOH
3821
X
WAT
39
5
HOH
HOH
3822
X
WAT
40
5
HOH
HOH
3823
X
WAT
41
5
HOH
HOH
3824
X
WAT
42
5
HOH
HOH
3825
X
WAT
43
5
HOH
HOH
3826
X
WAT
44
5
HOH
HOH
3827
X
WAT
45
5
HOH
HOH
3828
X
WAT
46
5
HOH
HOH
3829
X
WAT
47
5
HOH
HOH
3830
X
WAT
48
5
HOH
HOH
3831
X
WAT
49
5
HOH
HOH
3832
X
WAT
50
5
HOH
HOH
3833
X
WAT
51
5
HOH
HOH
3834
X
WAT
52
5
HOH
HOH
3835
X
WAT
53
5
HOH
HOH
3836
X
WAT
55
5
HOH
HOH
3837
X
WAT
56
5
HOH
HOH
3838
X
WAT
57
5
HOH
HOH
3839
X
WAT
60
5
HOH
HOH
3840
X
WAT
61
5
HOH
HOH
3841
X
WAT
62
5
HOH
HOH
3842
X
WAT
64
5
HOH
HOH
3843
X
WAT
65
5
HOH
HOH
3844
X
WAT
69
5
HOH
HOH
3845
X
WAT
70
5
HOH
HOH
3846
X
WAT
71
5
HOH
HOH
3847
X
WAT
72
5
HOH
HOH
3848
X
WAT
74
5
HOH
HOH
3849
X
WAT
76
5
HOH
HOH
3850
X
WAT
78
5
HOH
HOH
3851
X
WAT
79
5
HOH
HOH
3852
X
WAT
81
5
HOH
HOH
3853
X
WAT
82
5
HOH
HOH
3854
X
WAT
84
5
HOH
HOH
3855
X
WAT
85
5
HOH
HOH
3856
X
WAT
86
5
HOH
HOH
3857
X
WAT
87
5
HOH
HOH
3858
X
WAT
88
5
HOH
HOH
3859
X
WAT
89
5
HOH
HOH
3860
X
WAT
90
5
HOH
HOH
3861
X
WAT
91
5
HOH
HOH
3862
X
LYS
1
n
1
LYS
1
X
VAL
2
n
2
VAL
2
X
PHE
3
n
3
PHE
3
X
GLY
4
n
4
GLY
4
X
ARG
5
n
5
ARG
5
X
CYS
6
n
6
CYS
6
X
GLU
7
n
7
GLU
7
X
LEU
8
n
8
LEU
8
X
ALA
9
n
9
ALA
9
X
ALA
10
n
10
ALA
10
X
ALA
11
n
11
ALA
11
X
MET
12
n
12
MET
12
X
LYS
13
n
13
LYS
13
X
ARG
14
n
14
ARG
14
X
HIS
15
n
15
HIS
15
X
GLY
16
n
16
GLY
16
X
LEU
17
n
17
LEU
17
X
ASP
18
n
18
ASP
18
X
ASN
19
n
19
ASN
19
X
TYR
20
n
20
TYR
20
X
ARG
21
n
21
ARG
21
X
GLY
22
n
22
GLY
22
X
TYR
23
n
23
TYR
23
X
SER
24
n
24
SER
24
X
LEU
25
n
25
LEU
25
X
GLY
26
n
26
GLY
26
X
ASN
27
n
27
ASN
27
X
TRP
28
n
28
TRP
28
X
VAL
29
n
29
VAL
29
X
CYS
30
n
30
CYS
30
X
ALA
31
n
31
ALA
31
X
ALA
32
n
32
ALA
32
X
LYS
33
n
33
LYS
33
X
PHE
34
n
34
PHE
34
X
GLU
35
n
35
GLU
35
X
SER
36
n
36
SER
36
X
ASN
37
n
37
ASN
37
X
PHE
38
n
38
PHE
38
X
ASN
39
n
39
ASN
39
X
THR
40
n
40
THR
40
X
GLN
41
n
41
GLN
41
X
ALA
42
n
42
ALA
42
X
THR
43
n
43
THR
43
X
ASN
44
n
44
ASN
44
X
ARG
45
n
45
ARG
45
X
ASN
46
n
46
ASN
46
X
THR
47
n
47
THR
47
X
ASP
48
n
48
ASP
48
X
GLY
49
n
49
GLY
49
X
SER
50
n
50
SER
50
X
THR
51
n
51
THR
51
X
ASP
52
n
52
ASP
52
X
TYR
53
n
53
TYR
53
X
GLY
54
n
54
GLY
54
X
ILE
55
n
55
ILE
55
X
LEU
56
n
56
LEU
56
X
GLN
57
n
57
GLN
57
X
ILE
58
n
58
ILE
58
X
ASN
59
n
59
ASN
59
X
SER
60
n
60
SER
60
X
ARG
61
n
61
ARG
61
X
TRP
62
n
62
TRP
62
X
TRP
63
n
63
TRP
63
X
CYS
64
n
64
CYS
64
X
ASN
65
n
65
ASN
65
X
ASP
66
n
66
ASP
66
X
GLY
67
n
67
GLY
67
X
ARG
68
n
68
ARG
68
X
THR
69
n
69
THR
69
X
PRO
70
n
70
PRO
70
X
GLY
71
n
71
GLY
71
X
SER
72
n
72
SER
72
X
ARG
73
n
73
ARG
73
X
ASN
74
n
74
ASN
74
X
LEU
75
n
75
LEU
75
X
CYS
76
n
76
CYS
76
X
ASN
77
n
77
ASN
77
X
ILE
78
n
78
ILE
78
X
PRO
79
n
79
PRO
79
X
CYS
80
n
80
CYS
80
X
SER
81
n
81
SER
81
X
ALA
82
n
82
ALA
82
X
LEU
83
n
83
LEU
83
X
LEU
84
n
84
LEU
84
X
SER
85
n
85
SER
85
X
SER
86
n
86
SER
86
X
ASP
87
n
87
ASP
87
X
ILE
88
n
88
ILE
88
X
THR
89
n
89
THR
89
X
ALA
90
n
90
ALA
90
X
SER
91
n
91
SER
91
X
VAL
92
n
92
VAL
92
X
ASN
93
n
93
ASN
93
X
CYS
94
n
94
CYS
94
X
ALA
95
n
95
ALA
95
X
LYS
96
n
96
LYS
96
X
LYS
97
n
97
LYS
97
X
ILE
98
n
98
ILE
98
X
VAL
99
n
99
VAL
99
X
SER
100
n
100
SER
100
X
ASP
101
n
101
ASP
101
X
GLY
102
n
102
GLY
102
X
ASN
103
n
103
ASN
103
X
GLY
104
n
104
GLY
104
X
MET
105
n
105
MET
105
X
ASN
106
n
106
ASN
106
X
ALA
107
n
107
ALA
107
X
TRP
108
n
108
TRP
108
X
VAL
109
n
109
VAL
109
X
ALA
110
n
110
ALA
110
X
TRP
111
n
111
TRP
111
X
ARG
112
n
112
ARG
112
X
ASN
113
n
113
ASN
113
X
ARG
114
n
114
ARG
114
X
CYS
115
n
115
CYS
115
X
LYS
116
n
116
LYS
116
X
GLY
117
n
117
GLY
117
X
THR
118
n
118
THR
118
X
ASP
119
n
119
ASP
119
X
VAL
120
n
120
VAL
120
X
GLN
121
n
121
GLN
121
X
ALA
122
n
122
ALA
122
X
TRP
123
n
123
TRP
123
X
ILE
124
n
124
ILE
124
X
ARG
125
n
125
ARG
125
X
GLY
126
n
126
GLY
126
X
CYS
127
n
127
CYS
127
X
ARG
128
n
128
ARG
128
X
LEU
129
n
129
LEU
129
X
author_defined_assembly
1
monomeric
X
SER
60
A
O
SER
60
1_555
X
NA
1076
B
NA
NA
1_555
X
CYS
64
A
O
CYS
64
1_555
81.8
X
SER
60
A
O
SER
60
1_555
X
NA
1076
B
NA
NA
1_555
X
SER
72
A
OG
SER
72
1_555
84.6
X
CYS
64
A
O
CYS
64
1_555
X
NA
1076
B
NA
NA
1_555
X
SER
72
A
OG
SER
72
1_555
150.8
X
SER
60
A
O
SER
60
1_555
X
NA
1076
B
NA
NA
1_555
X
ARG
73
A
O
ARG
73
1_555
96.3
X
CYS
64
A
O
CYS
64
1_555
X
NA
1076
B
NA
NA
1_555
X
ARG
73
A
O
ARG
73
1_555
95.9
X
SER
72
A
OG
SER
72
1_555
X
NA
1076
B
NA
NA
1_555
X
ARG
73
A
O
ARG
73
1_555
111.2
X
SER
60
A
O
SER
60
1_555
X
NA
1076
B
NA
NA
1_555
X
HOH
3795
F
O
HOH
1_555
88.2
X
CYS
64
A
O
CYS
64
1_555
X
NA
1076
B
NA
NA
1_555
X
HOH
3795
F
O
HOH
1_555
81.6
X
SER
72
A
OG
SER
72
1_555
X
NA
1076
B
NA
NA
1_555
X
HOH
3795
F
O
HOH
1_555
72.3
X
ARG
73
A
O
ARG
73
1_555
X
NA
1076
B
NA
NA
1_555
X
HOH
3795
F
O
HOH
1_555
174.5
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
X
N
ASN
44
A
N
ASN
44
X
O
ASP
52
A
O
ASP
52
X
N
TYR
53
A
N
TYR
53
X
O
ILE
58
A
O
ILE
58
1
X
X
O
O
HOH
HOH
3857
3857
1.19
1_555
7_556
1
X
X
O
O
HOH
HOH
3859
3859
1.28
1_555
7_557
0.225
0.193
1.8
18.38
594
11519
10925
Random
1
THROUGHOUT
MOLECULAR REPLACEMENT
2LYM
Engh & Huber
0.23
0.19
5.00
0.04
1.8
18.38
77
1092
14
0
1001
1.3
22.8
0.71
0.225
0.009
0.193
2.03
594
113638
24.23
1.8
18.38
1YKZ
11605
11605
0.07
1
1.00
0.07
1.94
2.03
11606
1.00
data reduction
DENZO
data scaling
SCALEPACK
refinement
CNS
1.1
phasing
CNS
1.1
Effect of alcohols on protein hydration
1
N
N
2
N
N
3
N
N
4
N
N
4
N
N
5
N
N
X
GLY
4
A
GLY
4
HELX_P
X
HIS
15
A
HIS
15
1
1
12
X
ASN
19
A
ASN
19
HELX_P
X
TYR
23
A
TYR
23
5
2
5
X
SER
24
A
SER
24
HELX_P
X
ASN
37
A
ASN
37
1
3
14
X
PRO
79
A
PRO
79
HELX_P
X
SER
85
A
SER
85
5
4
7
X
ILE
88
A
ILE
88
HELX_P
X
SER
100
A
SER
100
1
5
13
X
ASN
103
A
ASN
103
HELX_P
X
ALA
107
A
ALA
107
5
6
5
X
TRP
108
A
TRP
108
HELX_P
X
CYS
115
A
CYS
115
1
7
8
X
ASP
119
A
ASP
119
HELX_P
X
ARG
125
A
ARG
125
5
8
7
disulf
2.027
X
CYS
6
A
SG
CYS
6
1_555
X
CYS
127
A
SG
CYS
127
1_555
disulf
2.029
X
CYS
30
A
SG
CYS
30
1_555
X
CYS
115
A
SG
CYS
115
1_555
disulf
2.031
X
CYS
64
A
SG
CYS
64
1_555
X
CYS
80
A
SG
CYS
80
1_555
disulf
2.030
X
CYS
76
A
SG
CYS
76
1_555
X
CYS
94
A
SG
CYS
94
1_555
metalc
2.467
X
SER
60
A
O
SER
60
1_555
X
NA
1076
B
NA
NA
1_555
metalc
2.503
X
CYS
64
A
O
CYS
64
1_555
X
NA
1076
B
NA
NA
1_555
metalc
2.600
X
SER
72
A
OG
SER
72
1_555
X
NA
1076
B
NA
NA
1_555
metalc
2.537
X
ARG
73
A
O
ARG
73
1_555
X
NA
1076
B
NA
NA
1_555
metalc
2.696
X
NA
1076
B
NA
NA
1_555
X
HOH
3795
F
O
HOH
1_555
HYDROLASE
Hen egg white lysozyme, alcohols, hydration, water structure, HYDROLASE
LYSC_CHICK
UNP
1
19
P00698
KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC
SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
19
147
1YKZ
1
129
P00698
X
1
1
129
3
anti-parallel
anti-parallel
X
THR
43
A
THR
43
X
ARG
45
A
ARG
45
X
THR
51
A
THR
51
X
TYR
53
A
TYR
53
X
ILE
58
A
ILE
58
X
ASN
59
A
ASN
59
BINDING SITE FOR RESIDUE NA X 1076
X
NA
1076
Software
5
BINDING SITE FOR RESIDUE CL X 1037
X
CL
1037
Software
2
BINDING SITE FOR RESIDUE PTL X 3784
X
PTL
3784
Software
4
BINDING SITE FOR RESIDUE PTL X 3785
X
PTL
3785
Software
7
X
SER
60
A
SER
60
5
1_555
X
CYS
64
A
CYS
64
5
1_555
X
SER
72
A
SER
72
5
1_555
X
ARG
73
A
ARG
73
5
1_555
X
HOH
3795
F
HOH
5
1_555
X
TYR
23
A
TYR
23
2
1_555
X
ASN
113
A
ASN
113
2
4_455
X
GLY
4
A
GLY
4
4
1_555
X
ARG
5
A
ARG
5
4
1_555
X
CYS
6
A
CYS
6
4
1_555
X
GLU
7
A
GLU
7
4
1_555
X
GLN
57
A
GLN
57
7
1_555
X
ILE
58
A
ILE
58
7
1_555
X
ASN
59
A
ASN
59
7
1_555
X
TRP
63
A
TRP
63
7
1_555
X
ALA
107
A
ALA
107
7
1_555
X
TRP
108
A
TRP
108
7
1_555
X
VAL
109
A
VAL
109
7
1_555
96
P 43 21 2