1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Pires, J.R.
Parthier, C.
Aido-Machado, R.
Wiedemann, U.
Otte, L.
Boehm, G.
Rudolph, R.
Oschkinat, H.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
348
399
408
10.1016/j.jmb.2005.02.056
15811376
Structural basis for APPTPPPLPP peptide recognition by the FBP11WW1 domain.
2005
10.2210/pdb1ywj/pdb
pdb_00001ywj
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
4747.092
Formin-binding protein 3
WW1 domain
1
man
polymer
Formin binding protein 11
no
no
GSRRASVGSAKSMWTEHKSPDGRTYYYNTETKQSTWEKPDD
GSRRASVGSAKSMWTEHKSPDGRTYYYNTETKQSTWEKPDD
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
Escherichia coli
sample
9606
Homo sapiens
469008
Escherichia coli BL21(DE3)
BL21 DE3
Plasmid
pGEX-2TK
database_2
pdbx_nmr_software
pdbx_struct_assembly
pdbx_struct_oper_list
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2005-04-12
1
1
2008-04-30
1
2
2011-07-13
1
3
2022-03-02
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
_struct_ref_seq_dif.details
the same protein of the FBP11WW1 domain complexed to the peptide APPTPPPLPP
RCSB
Y
PDBJ
2005-02-18
REL
REL
structures with the lowest energy
200
15
triple-resonance
3D_13C-separated_NOESY
3D_15N-separated_NOESY
2D NOESY
2D TOCSY
100mM NaCl
6.0
1
atm
298
K
The structure was also refined with ARIA ver.1.2, authors: Linge, J.P., O'Dongue, S.I., Nilges, M.
Automated assignment of NOEs and simulated anneling with torsion angle dinamics
1
lowest energy
1.8mM [U-15N,13C] FBP11WW1, 10mM phosphate buffer, 100mM Nacl, 0.1mM DTT, 0.1mM EDTA
90% H2O/10% D2O
1.8mM [U-15N,13C] FBP11WW1, 10mM phosphate buffer, 100mM Nacl, 0.1mM DTT, 0.1mM EDTA
100% D2O
1.8mM [U-15N] FBP11WW1, 10mM phosphate buffer, 100mM Nacl, 0.1mM DTT, 0.1mM EDTA
90% H2O/10% D2O
1.8mM FBP11WW1, 10mM phosphate buffer, 100mM Nacl, 0.1mM DTT, 0.1mM EDTA
90% H2O/10% D2O
refinement
CNS
1.1
Bruker AG
collection
XwinNMR
3.2
Bruker AG
processing
XwinNMR
3.2
Goddard, T.D., Keneller, D.G., University of California San Francisco
data analysis
Sparky
3.1
600
Bruker
DRX
n
1
4
A
n
2
5
A
n
3
6
A
n
4
7
A
n
5
8
A
n
6
9
A
n
7
10
A
n
8
11
A
n
9
12
A
n
10
13
A
n
11
14
A
SER
15
n
12
SER
15
A
MET
16
n
13
MET
16
A
TRP
17
n
14
TRP
17
A
THR
18
n
15
THR
18
A
GLU
19
n
16
GLU
19
A
HIS
20
n
17
HIS
20
A
LYS
21
n
18
LYS
21
A
SER
22
n
19
SER
22
A
PRO
23
n
20
PRO
23
A
ASP
24
n
21
ASP
24
A
GLY
25
n
22
GLY
25
A
ARG
26
n
23
ARG
26
A
THR
27
n
24
THR
27
A
TYR
28
n
25
TYR
28
A
TYR
29
n
26
TYR
29
A
TYR
30
n
27
TYR
30
A
ASN
31
n
28
ASN
31
A
THR
32
n
29
THR
32
A
GLU
33
n
30
GLU
33
A
THR
34
n
31
THR
34
A
LYS
35
n
32
LYS
35
A
GLN
36
n
33
GLN
36
A
SER
37
n
34
SER
37
A
THR
38
n
35
THR
38
A
TRP
39
n
36
TRP
39
A
GLU
40
n
37
GLU
40
A
LYS
41
n
38
LYS
41
A
PRO
42
n
39
PRO
42
A
n
40
43
A
n
41
44
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
THR
18
A
N
THR
15
A
O
TYR
30
A
O
TYR
27
A
N
ASN
31
A
N
ASN
28
A
O
GLN
36
A
O
GLN
33
1
A
GLY
4
A
GLY
1
1
Y
1
A
SER
5
A
SER
2
1
Y
1
A
ARG
6
A
ARG
3
1
Y
1
A
ARG
7
A
ARG
4
1
Y
1
A
ALA
8
A
ALA
5
1
Y
1
A
SER
9
A
SER
6
1
Y
1
A
VAL
10
A
VAL
7
1
Y
1
A
GLY
11
A
GLY
8
1
Y
1
A
SER
12
A
SER
9
1
Y
1
A
ALA
13
A
ALA
10
1
Y
1
A
LYS
14
A
LYS
11
1
Y
1
A
ASP
43
A
ASP
40
1
Y
1
A
ASP
44
A
ASP
41
1
Y
2
A
GLY
4
A
GLY
1
1
Y
2
A
SER
5
A
SER
2
1
Y
2
A
ARG
6
A
ARG
3
1
Y
2
A
ARG
7
A
ARG
4
1
Y
2
A
ALA
8
A
ALA
5
1
Y
2
A
SER
9
A
SER
6
1
Y
2
A
VAL
10
A
VAL
7
1
Y
2
A
GLY
11
A
GLY
8
1
Y
2
A
SER
12
A
SER
9
1
Y
2
A
ALA
13
A
ALA
10
1
Y
2
A
LYS
14
A
LYS
11
1
Y
2
A
ASP
43
A
ASP
40
1
Y
2
A
ASP
44
A
ASP
41
1
Y
3
A
GLY
4
A
GLY
1
1
Y
3
A
SER
5
A
SER
2
1
Y
3
A
ARG
6
A
ARG
3
1
Y
3
A
ARG
7
A
ARG
4
1
Y
3
A
ALA
8
A
ALA
5
1
Y
3
A
SER
9
A
SER
6
1
Y
3
A
VAL
10
A
VAL
7
1
Y
3
A
GLY
11
A
GLY
8
1
Y
3
A
SER
12
A
SER
9
1
Y
3
A
ALA
13
A
ALA
10
1
Y
3
A
LYS
14
A
LYS
11
1
Y
3
A
ASP
43
A
ASP
40
1
Y
3
A
ASP
44
A
ASP
41
1
Y
4
A
GLY
4
A
GLY
1
1
Y
4
A
SER
5
A
SER
2
1
Y
4
A
ARG
6
A
ARG
3
1
Y
4
A
ARG
7
A
ARG
4
1
Y
4
A
ALA
8
A
ALA
5
1
Y
4
A
SER
9
A
SER
6
1
Y
4
A
VAL
10
A
VAL
7
1
Y
4
A
GLY
11
A
GLY
8
1
Y
4
A
SER
12
A
SER
9
1
Y
4
A
ALA
13
A
ALA
10
1
Y
4
A
LYS
14
A
LYS
11
1
Y
4
A
ASP
43
A
ASP
40
1
Y
4
A
ASP
44
A
ASP
41
1
Y
5
A
GLY
4
A
GLY
1
1
Y
5
A
SER
5
A
SER
2
1
Y
5
A
ARG
6
A
ARG
3
1
Y
5
A
ARG
7
A
ARG
4
1
Y
5
A
ALA
8
A
ALA
5
1
Y
5
A
SER
9
A
SER
6
1
Y
5
A
VAL
10
A
VAL
7
1
Y
5
A
GLY
11
A
GLY
8
1
Y
5
A
SER
12
A
SER
9
1
Y
5
A
ALA
13
A
ALA
10
1
Y
5
A
LYS
14
A
LYS
11
1
Y
5
A
ASP
43
A
ASP
40
1
Y
5
A
ASP
44
A
ASP
41
1
Y
6
A
GLY
4
A
GLY
1
1
Y
6
A
SER
5
A
SER
2
1
Y
6
A
ARG
6
A
ARG
3
1
Y
6
A
ARG
7
A
ARG
4
1
Y
6
A
ALA
8
A
ALA
5
1
Y
6
A
SER
9
A
SER
6
1
Y
6
A
VAL
10
A
VAL
7
1
Y
6
A
GLY
11
A
GLY
8
1
Y
6
A
SER
12
A
SER
9
1
Y
6
A
ALA
13
A
ALA
10
1
Y
6
A
LYS
14
A
LYS
11
1
Y
6
A
ASP
43
A
ASP
40
1
Y
6
A
ASP
44
A
ASP
41
1
Y
7
A
GLY
4
A
GLY
1
1
Y
7
A
SER
5
A
SER
2
1
Y
7
A
ARG
6
A
ARG
3
1
Y
7
A
ARG
7
A
ARG
4
1
Y
7
A
ALA
8
A
ALA
5
1
Y
7
A
SER
9
A
SER
6
1
Y
7
A
VAL
10
A
VAL
7
1
Y
7
A
GLY
11
A
GLY
8
1
Y
7
A
SER
12
A
SER
9
1
Y
7
A
ALA
13
A
ALA
10
1
Y
7
A
LYS
14
A
LYS
11
1
Y
7
A
ASP
43
A
ASP
40
1
Y
7
A
ASP
44
A
ASP
41
1
Y
8
A
GLY
4
A
GLY
1
1
Y
8
A
SER
5
A
SER
2
1
Y
8
A
ARG
6
A
ARG
3
1
Y
8
A
ARG
7
A
ARG
4
1
Y
8
A
ALA
8
A
ALA
5
1
Y
8
A
SER
9
A
SER
6
1
Y
8
A
VAL
10
A
VAL
7
1
Y
8
A
GLY
11
A
GLY
8
1
Y
8
A
SER
12
A
SER
9
1
Y
8
A
ALA
13
A
ALA
10
1
Y
8
A
LYS
14
A
LYS
11
1
Y
8
A
ASP
43
A
ASP
40
1
Y
8
A
ASP
44
A
ASP
41
1
Y
9
A
GLY
4
A
GLY
1
1
Y
9
A
SER
5
A
SER
2
1
Y
9
A
ARG
6
A
ARG
3
1
Y
9
A
ARG
7
A
ARG
4
1
Y
9
A
ALA
8
A
ALA
5
1
Y
9
A
SER
9
A
SER
6
1
Y
9
A
VAL
10
A
VAL
7
1
Y
9
A
GLY
11
A
GLY
8
1
Y
9
A
SER
12
A
SER
9
1
Y
9
A
ALA
13
A
ALA
10
1
Y
9
A
LYS
14
A
LYS
11
1
Y
9
A
ASP
43
A
ASP
40
1
Y
9
A
ASP
44
A
ASP
41
1
Y
10
A
GLY
4
A
GLY
1
1
Y
10
A
SER
5
A
SER
2
1
Y
10
A
ARG
6
A
ARG
3
1
Y
10
A
ARG
7
A
ARG
4
1
Y
10
A
ALA
8
A
ALA
5
1
Y
10
A
SER
9
A
SER
6
1
Y
10
A
VAL
10
A
VAL
7
1
Y
10
A
GLY
11
A
GLY
8
1
Y
10
A
SER
12
A
SER
9
1
Y
10
A
ALA
13
A
ALA
10
1
Y
10
A
LYS
14
A
LYS
11
1
Y
10
A
ASP
43
A
ASP
40
1
Y
10
A
ASP
44
A
ASP
41
1
Y
11
A
GLY
4
A
GLY
1
1
Y
11
A
SER
5
A
SER
2
1
Y
11
A
ARG
6
A
ARG
3
1
Y
11
A
ARG
7
A
ARG
4
1
Y
11
A
ALA
8
A
ALA
5
1
Y
11
A
SER
9
A
SER
6
1
Y
11
A
VAL
10
A
VAL
7
1
Y
11
A
GLY
11
A
GLY
8
1
Y
11
A
SER
12
A
SER
9
1
Y
11
A
ALA
13
A
ALA
10
1
Y
11
A
LYS
14
A
LYS
11
1
Y
11
A
ASP
43
A
ASP
40
1
Y
11
A
ASP
44
A
ASP
41
1
Y
12
A
GLY
4
A
GLY
1
1
Y
12
A
SER
5
A
SER
2
1
Y
12
A
ARG
6
A
ARG
3
1
Y
12
A
ARG
7
A
ARG
4
1
Y
12
A
ALA
8
A
ALA
5
1
Y
12
A
SER
9
A
SER
6
1
Y
12
A
VAL
10
A
VAL
7
1
Y
12
A
GLY
11
A
GLY
8
1
Y
12
A
SER
12
A
SER
9
1
Y
12
A
ALA
13
A
ALA
10
1
Y
12
A
LYS
14
A
LYS
11
1
Y
12
A
ASP
43
A
ASP
40
1
Y
12
A
ASP
44
A
ASP
41
1
Y
13
A
GLY
4
A
GLY
1
1
Y
13
A
SER
5
A
SER
2
1
Y
13
A
ARG
6
A
ARG
3
1
Y
13
A
ARG
7
A
ARG
4
1
Y
13
A
ALA
8
A
ALA
5
1
Y
13
A
SER
9
A
SER
6
1
Y
13
A
VAL
10
A
VAL
7
1
Y
13
A
GLY
11
A
GLY
8
1
Y
13
A
SER
12
A
SER
9
1
Y
13
A
ALA
13
A
ALA
10
1
Y
13
A
LYS
14
A
LYS
11
1
Y
13
A
ASP
43
A
ASP
40
1
Y
13
A
ASP
44
A
ASP
41
1
Y
14
A
GLY
4
A
GLY
1
1
Y
14
A
SER
5
A
SER
2
1
Y
14
A
ARG
6
A
ARG
3
1
Y
14
A
ARG
7
A
ARG
4
1
Y
14
A
ALA
8
A
ALA
5
1
Y
14
A
SER
9
A
SER
6
1
Y
14
A
VAL
10
A
VAL
7
1
Y
14
A
GLY
11
A
GLY
8
1
Y
14
A
SER
12
A
SER
9
1
Y
14
A
ALA
13
A
ALA
10
1
Y
14
A
LYS
14
A
LYS
11
1
Y
14
A
ASP
43
A
ASP
40
1
Y
14
A
ASP
44
A
ASP
41
1
Y
15
A
GLY
4
A
GLY
1
1
Y
15
A
SER
5
A
SER
2
1
Y
15
A
ARG
6
A
ARG
3
1
Y
15
A
ARG
7
A
ARG
4
1
Y
15
A
ALA
8
A
ALA
5
1
Y
15
A
SER
9
A
SER
6
1
Y
15
A
VAL
10
A
VAL
7
1
Y
15
A
GLY
11
A
GLY
8
1
Y
15
A
SER
12
A
SER
9
1
Y
15
A
ALA
13
A
ALA
10
1
Y
15
A
LYS
14
A
LYS
11
1
Y
15
A
ASP
43
A
ASP
40
1
Y
15
A
ASP
44
A
ASP
41
1
Y
1
A
LYS
21
-49.45
156.98
1
A
PRO
23
-30.60
151.32
1
A
ASP
24
74.19
-4.77
1
A
LYS
35
80.24
48.11
2
A
LYS
21
-47.86
160.49
2
A
PRO
23
-31.19
151.44
2
A
LYS
35
90.12
53.89
3
A
SER
22
-179.09
-177.96
3
A
PRO
23
-22.21
142.13
3
A
LYS
35
81.96
49.95
4
A
PRO
23
-29.03
149.88
4
A
LYS
35
81.72
49.32
5
A
LYS
21
-49.54
160.11
5
A
PRO
23
-29.60
150.89
5
A
LYS
35
87.91
52.74
6
A
PRO
23
-27.24
143.16
6
A
LYS
35
87.34
52.14
7
A
LYS
21
-47.82
153.10
7
A
PRO
23
-31.19
153.48
7
A
LYS
35
84.29
51.45
8
A
LYS
21
-44.19
153.26
8
A
PRO
23
-36.19
158.71
8
A
LYS
35
81.88
48.32
9
A
LYS
21
-48.38
155.68
9
A
PRO
23
-34.50
156.45
9
A
ASP
24
75.41
-2.71
9
A
GLU
33
-57.70
-74.28
9
A
LYS
35
84.01
50.35
9
A
LYS
41
-59.29
105.89
10
A
LYS
21
-46.95
152.38
10
A
PRO
23
-34.34
155.82
10
A
LYS
35
91.38
54.45
11
A
LYS
21
-46.92
155.42
11
A
PRO
23
-34.62
152.75
11
A
LYS
35
81.04
50.29
11
A
LYS
41
-57.49
104.66
12
A
PRO
23
-28.84
146.52
12
A
ASP
24
79.34
-10.21
12
A
LYS
35
82.78
48.66
13
A
LYS
21
-46.58
152.94
13
A
PRO
23
-17.33
-61.15
13
A
ASP
24
-70.61
25.98
13
A
LYS
35
83.58
51.06
14
A
LYS
21
-46.91
154.06
14
A
PRO
23
-19.22
-57.25
14
A
ASP
24
-69.81
25.56
14
A
LYS
35
81.81
47.76
15
A
LYS
21
-48.90
154.22
15
A
PRO
23
-32.05
152.02
15
A
ASP
24
71.80
0.00
15
A
LYS
35
82.69
48.65
Structure of the FBP11WW1 domain
1
N
N
A
PRO
23
A
PRO
20
HELX_P
A
GLY
25
A
GLY
22
5
1
3
STRUCTURAL PROTEIN
WW domain, Class II, Proline-rich peptides, protein-protein interactions, Structural Protein
FNBP3_HUMAN
UNP
1
142
O75400
AKSMWTEHKSPDGRTYYYNTETKQSTWEKPDD
142
173
1YWJ
13
44
O75400
A
1
10
41
1
cloning artifact
GLY
4
1YWJ
A
O75400
UNP
1
1
cloning artifact
SER
5
1YWJ
A
O75400
UNP
2
1
cloning artifact
ARG
6
1YWJ
A
O75400
UNP
3
1
cloning artifact
ARG
7
1YWJ
A
O75400
UNP
4
1
cloning artifact
ALA
8
1YWJ
A
O75400
UNP
5
1
cloning artifact
SER
9
1YWJ
A
O75400
UNP
6
1
cloning artifact
VAL
10
1YWJ
A
O75400
UNP
7
1
cloning artifact
GLY
11
1YWJ
A
O75400
UNP
8
1
cloning artifact
SER
12
1YWJ
A
O75400
UNP
9
3
anti-parallel
anti-parallel
A
TRP
17
A
TRP
14
A
SER
22
A
SER
19
A
ARG
26
A
ARG
23
A
ASN
31
A
ASN
28
A
GLN
36
A
GLN
33
A
THR
38
A
THR
35