0.017795
0.010274
0.000000
0.000000
0.020548
0.000000
0.000000
0.000000
0.018169
0.00000
0.00000
0.00000
Eathiraj, S.
Pan, X.
Ritacco, C.
Lambright, D.G.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
3
90.00
90.00
120.00
56.194
56.194
55.039
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C10 H17 N6 O13 P3
522.196
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
Mg 2
24.305
MAGNESIUM ION
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
P
N
138
N
O
N
139
N
O
N
140
N
O
N
141
N
N
N
142
R
P
N
143
N
O
N
144
N
O
N
145
N
O
N
146
S
P
N
147
N
O
N
148
N
O
N
149
N
O
N
150
N
C
N
151
R
C
N
152
N
O
N
153
S
C
N
154
N
O
N
155
R
C
N
156
N
O
N
157
R
C
Y
158
N
N
Y
159
N
C
Y
160
N
N
Y
161
N
C
Y
162
N
C
N
163
N
O
Y
164
N
N
Y
165
N
C
N
166
N
N
Y
167
N
N
Y
168
N
C
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
N
N
187
S
C
N
188
N
C
N
189
N
O
N
190
N
C
Y
191
N
C
Y
192
N
N
Y
193
N
C
Y
194
N
C
Y
195
N
N
N
196
N
O
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
O
N
208
N
H
N
209
N
H
N
210
N
N
N
211
S
C
N
212
N
C
N
213
N
O
N
214
S
C
N
215
N
C
N
216
N
C
N
217
N
C
N
218
N
O
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
N
N
233
S
C
N
234
N
C
N
235
N
O
N
236
N
C
N
237
N
C
N
238
N
C
N
239
N
C
N
240
N
O
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
N
N
255
S
C
N
256
N
C
N
257
N
O
N
258
N
C
N
259
N
C
N
260
N
C
N
261
N
C
N
262
N
N
N
263
N
O
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
N
N
280
S
C
N
281
N
C
N
282
N
O
N
283
N
C
N
284
N
C
N
285
N
S
N
286
N
C
N
287
N
O
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
MG
N
300
N
N
N
301
S
C
N
302
N
C
N
303
N
O
N
304
N
C
Y
305
N
C
Y
306
N
C
Y
307
N
C
Y
308
N
C
Y
309
N
C
Y
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
N
N
324
S
C
N
325
N
C
N
326
N
O
N
327
N
C
N
328
N
C
N
329
N
C
N
330
N
O
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
N
N
341
S
C
N
342
N
C
N
343
N
O
N
344
N
C
N
345
N
O
N
346
N
O
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
N
N
355
S
C
N
356
N
C
N
357
N
O
N
358
R
C
N
359
N
O
N
360
N
C
N
361
N
O
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
N
N
372
S
C
N
373
N
C
N
374
N
O
N
375
N
C
Y
376
N
C
Y
377
N
C
Y
378
N
C
Y
379
N
N
Y
380
N
C
Y
381
N
C
Y
382
N
C
Y
383
N
C
Y
384
N
C
N
385
N
O
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
N
N
399
S
C
N
400
N
C
N
401
N
O
N
402
N
C
Y
403
N
C
Y
404
N
C
Y
405
N
C
Y
406
N
C
Y
407
N
C
Y
408
N
C
N
409
N
O
N
410
N
O
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
N
N
423
S
C
N
424
N
C
N
425
N
O
N
426
N
C
N
427
N
C
N
428
N
C
N
429
N
O
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
doub
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
doub
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
doub
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
Y
164
N
sing
Y
165
N
sing
Y
166
N
doub
N
167
N
sing
Y
168
N
sing
Y
169
N
sing
Y
170
N
doub
N
171
N
doub
Y
172
N
sing
Y
173
N
sing
N
174
N
sing
N
175
N
sing
Y
176
N
doub
N
177
N
sing
N
178
N
sing
Y
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
Y
191
N
sing
Y
192
N
doub
Y
193
N
doub
N
194
N
sing
Y
195
N
sing
N
196
N
sing
Y
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
doub
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
doub
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
doub
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
doub
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
doub
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
Y
299
N
doub
Y
300
N
sing
Y
301
N
sing
N
302
N
sing
Y
303
N
doub
N
304
N
sing
Y
305
N
doub
N
306
N
sing
Y
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
doub
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
doub
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
doub
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
doub
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
Y
368
N
doub
Y
369
N
sing
Y
370
N
sing
N
371
N
sing
Y
372
N
doub
Y
373
N
sing
Y
374
N
sing
N
375
N
sing
Y
376
N
sing
Y
377
N
doub
N
378
N
sing
Y
379
N
doub
N
380
N
sing
Y
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
doub
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
Y
396
N
doub
Y
397
N
sing
Y
398
N
sing
N
399
N
sing
Y
400
N
doub
N
401
N
sing
Y
402
N
doub
N
403
N
sing
Y
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
sing
N
415
N
doub
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
UK
Nature
NATUAS
0006
0028-0836
436
415
419
10.1038/nature03798
16034420
Structural basis of family-wide Rab GTPase recognition by rabenosyn-5.
2005
10.2210/pdb1z06/pdb
pdb_00001z06
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
osmic mirror
IMAGE PLATE
2003-02-25
MAR scanner 300 mm plate
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RUH3R
21683.803
Ras-related protein Rab-33B
1
man
polymer
24.305
MAGNESIUM ION
1
syn
non-polymer
522.196
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
1
syn
non-polymer
18.015
water
111
nat
water
no
no
MGHHHHHHGSLVPRGSRSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQE
RFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMP
LFETSAKNPNDNDHVEAIFMTLAHKLKSH
MGHHHHHHGSLVPRGSRSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQE
RFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMP
LFETSAKNPNDNDHVEAIFMTLAHKLKSH
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
house mouse
Mus
Escherichia
sample
Rab33b
10090
Mus musculus
562
Escherichia coli
BL21 (DE3) Codon Plus-RIL Cells
6xHis fusion, pET vector
modified pET15b
1
2.75
55.0
VAPOR DIFFUSION, HANGING DROP
6.0
20% PEG 6000, 10% Glycerol, 1M Lithium Chlroride, 50mM MES, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K
277
chem_comp_atom
chem_comp_bond
database_2
pdbx_struct_conn_angle
struct_conn
struct_ref_seq_dif
struct_site
pdbx_initial_refinement_model
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Refinement description
1
0
2005-07-26
1
1
2008-04-30
1
2
2011-07-13
1
3
2024-02-14
1
4
2024-04-03
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
2005-03-01
REL
REL
MG
MAGNESIUM ION
GNP
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
HOH
water
Polyalanine Rab5c GTPase
Other
experimental model
MG
201
2
MG
MG
203
A
GNP
200
3
GNP
GNP
204
A
HOH
1
4
HOH
HOH
205
A
HOH
2
4
HOH
HOH
206
A
HOH
3
4
HOH
HOH
207
A
HOH
5
4
HOH
HOH
208
A
HOH
7
4
HOH
HOH
209
A
HOH
8
4
HOH
HOH
210
A
HOH
11
4
HOH
HOH
211
A
HOH
12
4
HOH
HOH
212
A
HOH
13
4
HOH
HOH
213
A
HOH
14
4
HOH
HOH
214
A
HOH
15
4
HOH
HOH
215
A
HOH
16
4
HOH
HOH
216
A
HOH
17
4
HOH
HOH
217
A
HOH
19
4
HOH
HOH
218
A
HOH
22
4
HOH
HOH
219
A
HOH
23
4
HOH
HOH
220
A
HOH
24
4
HOH
HOH
221
A
HOH
25
4
HOH
HOH
222
A
HOH
26
4
HOH
HOH
223
A
HOH
27
4
HOH
HOH
224
A
HOH
28
4
HOH
HOH
225
A
HOH
29
4
HOH
HOH
226
A
HOH
30
4
HOH
HOH
227
A
HOH
31
4
HOH
HOH
228
A
HOH
32
4
HOH
HOH
229
A
HOH
33
4
HOH
HOH
230
A
HOH
35
4
HOH
HOH
231
A
HOH
36
4
HOH
HOH
232
A
HOH
37
4
HOH
HOH
233
A
HOH
38
4
HOH
HOH
234
A
HOH
39
4
HOH
HOH
235
A
HOH
40
4
HOH
HOH
236
A
HOH
41
4
HOH
HOH
237
A
HOH
42
4
HOH
HOH
238
A
HOH
43
4
HOH
HOH
239
A
HOH
44
4
HOH
HOH
240
A
HOH
45
4
HOH
HOH
241
A
HOH
46
4
HOH
HOH
242
A
HOH
49
4
HOH
HOH
243
A
HOH
50
4
HOH
HOH
244
A
HOH
51
4
HOH
HOH
245
A
HOH
52
4
HOH
HOH
246
A
HOH
53
4
HOH
HOH
247
A
HOH
54
4
HOH
HOH
248
A
HOH
56
4
HOH
HOH
249
A
HOH
58
4
HOH
HOH
250
A
HOH
59
4
HOH
HOH
251
A
HOH
60
4
HOH
HOH
252
A
HOH
61
4
HOH
HOH
253
A
HOH
62
4
HOH
HOH
254
A
HOH
63
4
HOH
HOH
255
A
HOH
65
4
HOH
HOH
256
A
HOH
66
4
HOH
HOH
257
A
HOH
69
4
HOH
HOH
258
A
HOH
73
4
HOH
HOH
259
A
HOH
74
4
HOH
HOH
260
A
HOH
75
4
HOH
HOH
261
A
HOH
76
4
HOH
HOH
262
A
HOH
78
4
HOH
HOH
263
A
HOH
79
4
HOH
HOH
264
A
HOH
84
4
HOH
HOH
265
A
HOH
85
4
HOH
HOH
266
A
HOH
86
4
HOH
HOH
267
A
HOH
87
4
HOH
HOH
268
A
HOH
88
4
HOH
HOH
269
A
HOH
89
4
HOH
HOH
270
A
HOH
91
4
HOH
HOH
271
A
HOH
92
4
HOH
HOH
272
A
HOH
93
4
HOH
HOH
273
A
HOH
95
4
HOH
HOH
274
A
HOH
97
4
HOH
HOH
275
A
HOH
99
4
HOH
HOH
276
A
HOH
101
4
HOH
HOH
277
A
HOH
102
4
HOH
HOH
278
A
HOH
104
4
HOH
HOH
279
A
HOH
105
4
HOH
HOH
280
A
HOH
106
4
HOH
HOH
281
A
HOH
108
4
HOH
HOH
282
A
HOH
110
4
HOH
HOH
283
A
HOH
111
4
HOH
HOH
284
A
HOH
114
4
HOH
HOH
285
A
HOH
115
4
HOH
HOH
286
A
HOH
117
4
HOH
HOH
287
A
HOH
118
4
HOH
HOH
288
A
HOH
120
4
HOH
HOH
289
A
HOH
121
4
HOH
HOH
290
A
HOH
122
4
HOH
HOH
291
A
HOH
123
4
HOH
HOH
292
A
HOH
127
4
HOH
HOH
293
A
HOH
129
4
HOH
HOH
294
A
HOH
132
4
HOH
HOH
295
A
HOH
133
4
HOH
HOH
296
A
HOH
136
4
HOH
HOH
297
A
HOH
137
4
HOH
HOH
298
A
HOH
140
4
HOH
HOH
299
A
HOH
141
4
HOH
HOH
300
A
HOH
142
4
HOH
HOH
301
A
HOH
144
4
HOH
HOH
302
A
HOH
145
4
HOH
HOH
303
A
HOH
147
4
HOH
HOH
304
A
HOH
150
4
HOH
HOH
305
A
HOH
151
4
HOH
HOH
306
A
HOH
152
4
HOH
HOH
307
A
HOH
154
4
HOH
HOH
308
A
HOH
156
4
HOH
HOH
309
A
HOH
159
4
HOH
HOH
310
A
HOH
160
4
HOH
HOH
311
A
HOH
166
4
HOH
HOH
312
A
HOH
167
4
HOH
HOH
313
A
HOH
169
4
HOH
HOH
314
A
HOH
175
4
HOH
HOH
315
A
n
1
14
A
n
2
15
A
n
3
16
A
n
4
17
A
n
5
18
A
n
6
19
A
n
7
20
A
n
8
21
A
n
9
22
A
n
10
23
A
n
11
24
A
n
12
25
A
n
13
26
A
n
14
27
A
n
15
28
A
n
16
29
A
n
17
30
A
n
18
31
A
ALA
32
n
19
ARG
32
A
ILE
33
n
20
ILE
33
A
PHE
34
n
21
PHE
34
A
LYS
35
n
22
LYS
35
A
ILE
36
n
23
ILE
36
A
ILE
37
n
24
ILE
37
A
VAL
38
n
25
VAL
38
A
ILE
39
n
26
ILE
39
A
GLY
40
n
27
GLY
40
A
ASP
41
n
28
ASP
41
A
SER
42
n
29
SER
42
A
ASN
43
n
30
ASN
43
A
VAL
44
n
31
VAL
44
A
GLY
45
n
32
GLY
45
A
LYS
46
n
33
LYS
46
A
THR
47
n
34
THR
47
A
CYS
48
n
35
CYS
48
A
LEU
49
n
36
LEU
49
A
THR
50
n
37
THR
50
A
TYR
51
n
38
TYR
51
A
ARG
52
n
39
ARG
52
A
PHE
53
n
40
PHE
53
A
CYS
54
n
41
CYS
54
A
ALA
55
n
42
ALA
55
A
GLY
56
n
43
GLY
56
A
ARG
57
n
44
ARG
57
A
PHE
58
n
45
PHE
58
A
PRO
59
n
46
PRO
59
A
ASP
60
n
47
ASP
60
A
ARG
61
n
48
ARG
61
A
THR
62
n
49
THR
62
A
ALA
63
n
50
GLU
63
A
ALA
64
n
51
ALA
64
A
THR
65
n
52
THR
65
A
ALA
66
n
53
ILE
66
A
GLY
67
n
54
GLY
67
A
VAL
68
n
55
VAL
68
A
ASP
69
n
56
ASP
69
A
PHE
70
n
57
PHE
70
A
ARG
71
n
58
ARG
71
A
GLU
72
n
59
GLU
72
A
ARG
73
n
60
ARG
73
A
ALA
74
n
61
ALA
74
A
VAL
75
n
62
VAL
75
A
ASP
76
n
63
ASP
76
A
ILE
77
n
64
ILE
77
A
ASP
78
n
65
ASP
78
A
GLY
79
n
66
GLY
79
A
GLU
80
n
67
GLU
80
A
ARG
81
n
68
ARG
81
A
ILE
82
n
69
ILE
82
A
LYS
83
n
70
LYS
83
A
ILE
84
n
71
ILE
84
A
GLN
85
n
72
GLN
85
A
LEU
86
n
73
LEU
86
A
TRP
87
n
74
TRP
87
A
ASP
88
n
75
ASP
88
A
THR
89
n
76
THR
89
A
ALA
90
n
77
ALA
90
A
GLY
91
n
78
GLY
91
A
GLN
92
n
79
GLN
92
A
GLU
93
n
80
GLU
93
A
ALA
94
n
81
ARG
94
A
PHE
95
n
82
PHE
95
A
ARG
96
n
83
ARG
96
A
LYS
97
n
84
LYS
97
A
SER
98
n
85
SER
98
A
MET
99
n
86
MET
99
A
VAL
100
n
87
VAL
100
A
GLN
101
n
88
GLN
101
A
HIS
102
n
89
HIS
102
A
TYR
103
n
90
TYR
103
A
TYR
104
n
91
TYR
104
A
ARG
105
n
92
ARG
105
A
ASN
106
n
93
ASN
106
A
VAL
107
n
94
VAL
107
A
HIS
108
n
95
HIS
108
A
ALA
109
n
96
ALA
109
A
VAL
110
n
97
VAL
110
A
VAL
111
n
98
VAL
111
A
PHE
112
n
99
PHE
112
A
VAL
113
n
100
VAL
113
A
TYR
114
n
101
TYR
114
A
ASP
115
n
102
ASP
115
A
MET
116
n
103
MET
116
A
THR
117
n
104
THR
117
A
ASN
118
n
105
ASN
118
A
MET
119
n
106
MET
119
A
ALA
120
n
107
ALA
120
A
SER
121
n
108
SER
121
A
PHE
122
n
109
PHE
122
A
HIS
123
n
110
HIS
123
A
SER
124
n
111
SER
124
A
LEU
125
n
112
LEU
125
A
PRO
126
n
113
PRO
126
A
ALA
127
n
114
ALA
127
A
TRP
128
n
115
TRP
128
A
ILE
129
n
116
ILE
129
A
GLU
130
n
117
GLU
130
A
GLU
131
n
118
GLU
131
A
CYS
132
n
119
CYS
132
A
LYS
133
n
120
LYS
133
A
GLN
134
n
121
GLN
134
A
HIS
135
n
122
HIS
135
A
LEU
136
n
123
LEU
136
A
GLY
137
n
124
LEU
137
A
ALA
138
n
125
ALA
138
A
ALA
139
n
126
ASN
139
A
ALA
140
n
127
ASP
140
A
ILE
141
n
128
ILE
141
A
PRO
142
n
129
PRO
142
A
ARG
143
n
130
ARG
143
A
ILE
144
n
131
ILE
144
A
LEU
145
n
132
LEU
145
A
VAL
146
n
133
VAL
146
A
GLY
147
n
134
GLY
147
A
ASN
148
n
135
ASN
148
A
LYS
149
n
136
LYS
149
A
CYS
150
n
137
CYS
150
A
ASP
151
n
138
ASP
151
A
LEU
152
n
139
LEU
152
A
ALA
153
n
140
ARG
153
A
SER
154
n
141
SER
154
A
ALA
155
n
142
ALA
155
A
ILE
156
n
143
ILE
156
A
GLN
157
n
144
GLN
157
A
VAL
158
n
145
VAL
158
A
PRO
159
n
146
PRO
159
A
THR
160
n
147
THR
160
A
ALA
161
n
148
ASP
161
A
LEU
162
n
149
LEU
162
A
ALA
163
n
150
ALA
163
A
GLN
164
n
151
GLN
164
A
ALA
165
n
152
LYS
165
A
PHE
166
n
153
PHE
166
A
ALA
167
n
154
ALA
167
A
ASP
168
n
155
ASP
168
A
THR
169
n
156
THR
169
A
HIS
170
n
157
HIS
170
A
SER
171
n
158
SER
171
A
MET
172
n
159
MET
172
A
PRO
173
n
160
PRO
173
A
LEU
174
n
161
LEU
174
A
PHE
175
n
162
PHE
175
A
GLU
176
n
163
GLU
176
A
THR
177
n
164
THR
177
A
SER
178
n
165
SER
178
A
ALA
179
n
166
ALA
179
A
LYS
180
n
167
LYS
180
A
ALA
181
n
168
ASN
181
A
ALA
182
n
169
PRO
182
A
ALA
183
n
170
ASN
183
A
ALA
184
n
171
ASP
184
A
ALA
185
n
172
ASN
185
A
ALA
186
n
173
ASP
186
A
HIS
187
n
174
HIS
187
A
VAL
188
n
175
VAL
188
A
GLU
189
n
176
GLU
189
A
ALA
190
n
177
ALA
190
A
ILE
191
n
178
ILE
191
A
PHE
192
n
179
PHE
192
A
MET
193
n
180
MET
193
A
THR
194
n
181
THR
194
A
LEU
195
n
182
LEU
195
A
ALA
196
n
183
ALA
196
A
n
184
197
A
n
185
198
A
n
186
199
A
n
187
200
A
n
188
201
A
n
189
202
A
author_defined_assembly
1
monomeric
A
THR
47
A
OG1
THR
34
1_555
A
MG
203
B
MG
MG
1_555
A
THR
65
A
OG1
THR
52
1_555
84.2
A
THR
47
A
OG1
THR
34
1_555
A
MG
203
B
MG
MG
1_555
A
GNP
204
C
O2G
GNP
1_555
171.2
A
THR
65
A
OG1
THR
52
1_555
A
MG
203
B
MG
MG
1_555
A
GNP
204
C
O2G
GNP
1_555
87.1
A
THR
47
A
OG1
THR
34
1_555
A
MG
203
B
MG
MG
1_555
A
GNP
204
C
O2B
GNP
1_555
92.1
A
THR
65
A
OG1
THR
52
1_555
A
MG
203
B
MG
MG
1_555
A
GNP
204
C
O2B
GNP
1_555
176.2
A
GNP
204
C
O2G
GNP
1_555
A
MG
203
B
MG
MG
1_555
A
GNP
204
C
O2B
GNP
1_555
96.6
A
THR
47
A
OG1
THR
34
1_555
A
MG
203
B
MG
MG
1_555
A
HOH
210
D
O
HOH
1_555
84.9
A
THR
65
A
OG1
THR
52
1_555
A
MG
203
B
MG
MG
1_555
A
HOH
210
D
O
HOH
1_555
88.9
A
GNP
204
C
O2G
GNP
1_555
A
MG
203
B
MG
MG
1_555
A
HOH
210
D
O
HOH
1_555
95.6
A
GNP
204
C
O2B
GNP
1_555
A
MG
203
B
MG
MG
1_555
A
HOH
210
D
O
HOH
1_555
91.6
A
THR
47
A
OG1
THR
34
1_555
A
MG
203
B
MG
MG
1_555
A
HOH
218
D
O
HOH
1_555
90.3
A
THR
65
A
OG1
THR
52
1_555
A
MG
203
B
MG
MG
1_555
A
HOH
218
D
O
HOH
1_555
85.9
A
GNP
204
C
O2G
GNP
1_555
A
MG
203
B
MG
MG
1_555
A
HOH
218
D
O
HOH
1_555
88.5
A
GNP
204
C
O2B
GNP
1_555
A
MG
203
B
MG
MG
1_555
A
HOH
218
D
O
HOH
1_555
93.2
A
HOH
210
D
O
HOH
1_555
A
MG
203
B
MG
MG
1_555
A
HOH
218
D
O
HOH
1_555
173.2
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
VAL
75
A
N
VAL
62
A
O
ILE
82
A
O
ILE
69
A
O
LYS
83
A
O
LYS
70
A
N
PHE
34
A
N
PHE
21
A
N
ILE
39
A
N
ILE
26
A
O
VAL
111
A
O
VAL
98
A
N
PHE
112
A
N
PHE
99
A
O
VAL
146
A
O
VAL
133
A
N
GLY
147
A
N
GLY
134
A
O
PHE
175
A
O
PHE
162
1
A
CG
ARG
32
A
CG
ARG
19
1
Y
1
A
CD
ARG
32
A
CD
ARG
19
1
Y
1
A
NE
ARG
32
A
NE
ARG
19
1
Y
1
A
CZ
ARG
32
A
CZ
ARG
19
1
Y
1
A
NH1
ARG
32
A
NH1
ARG
19
1
Y
1
A
NH2
ARG
32
A
NH2
ARG
19
1
Y
1
A
CG
GLU
63
A
CG
GLU
50
1
Y
1
A
CD
GLU
63
A
CD
GLU
50
1
Y
1
A
OE1
GLU
63
A
OE1
GLU
50
1
Y
1
A
OE2
GLU
63
A
OE2
GLU
50
1
Y
1
A
CG1
ILE
66
A
CG1
ILE
53
1
Y
1
A
CG2
ILE
66
A
CG2
ILE
53
1
Y
1
A
CD1
ILE
66
A
CD1
ILE
53
1
Y
1
A
CG
ARG
94
A
CG
ARG
81
1
Y
1
A
CD
ARG
94
A
CD
ARG
81
1
Y
1
A
NE
ARG
94
A
NE
ARG
81
1
Y
1
A
CZ
ARG
94
A
CZ
ARG
81
1
Y
1
A
NH1
ARG
94
A
NH1
ARG
81
1
Y
1
A
NH2
ARG
94
A
NH2
ARG
81
1
Y
1
A
CB
LEU
137
A
CB
LEU
124
1
Y
1
A
CG
LEU
137
A
CG
LEU
124
1
Y
1
A
CD1
LEU
137
A
CD1
LEU
124
1
Y
1
A
CD2
LEU
137
A
CD2
LEU
124
1
Y
1
A
CG
ASN
139
A
CG
ASN
126
1
Y
1
A
OD1
ASN
139
A
OD1
ASN
126
1
Y
1
A
ND2
ASN
139
A
ND2
ASN
126
1
Y
1
A
CG
ASP
140
A
CG
ASP
127
1
Y
1
A
OD1
ASP
140
A
OD1
ASP
127
1
Y
1
A
OD2
ASP
140
A
OD2
ASP
127
1
Y
1
A
CG
ARG
153
A
CG
ARG
140
1
Y
1
A
CD
ARG
153
A
CD
ARG
140
1
Y
1
A
NE
ARG
153
A
NE
ARG
140
1
Y
1
A
CZ
ARG
153
A
CZ
ARG
140
1
Y
1
A
NH1
ARG
153
A
NH1
ARG
140
1
Y
1
A
NH2
ARG
153
A
NH2
ARG
140
1
Y
1
A
CG
ASP
161
A
CG
ASP
148
1
Y
1
A
OD1
ASP
161
A
OD1
ASP
148
1
Y
1
A
OD2
ASP
161
A
OD2
ASP
148
1
Y
1
A
CG
LYS
165
A
CG
LYS
152
1
Y
1
A
CD
LYS
165
A
CD
LYS
152
1
Y
1
A
CE
LYS
165
A
CE
LYS
152
1
Y
1
A
NZ
LYS
165
A
NZ
LYS
152
1
Y
1
A
CG
ASN
181
A
CG
ASN
168
1
Y
1
A
OD1
ASN
181
A
OD1
ASN
168
1
Y
1
A
ND2
ASN
181
A
ND2
ASN
168
1
Y
1
A
CG
PRO
182
A
CG
PRO
169
1
Y
1
A
CD
PRO
182
A
CD
PRO
169
1
Y
1
A
CG
ASN
183
A
CG
ASN
170
1
Y
1
A
OD1
ASN
183
A
OD1
ASN
170
1
Y
1
A
ND2
ASN
183
A
ND2
ASN
170
1
Y
1
A
CG
ASP
184
A
CG
ASP
171
1
Y
1
A
OD1
ASP
184
A
OD1
ASP
171
1
Y
1
A
OD2
ASP
184
A
OD2
ASP
171
1
Y
1
A
CG
ASN
185
A
CG
ASN
172
1
Y
1
A
OD1
ASN
185
A
OD1
ASN
172
1
Y
1
A
ND2
ASN
185
A
ND2
ASN
172
1
Y
1
A
CG
ASP
186
A
CG
ASP
173
1
Y
1
A
OD1
ASP
186
A
OD1
ASP
173
1
Y
1
A
OD2
ASP
186
A
OD2
ASP
173
1
Y
1
A
MET
14
A
MET
1
1
Y
1
A
GLY
15
A
GLY
2
1
Y
1
A
HIS
16
A
HIS
3
1
Y
1
A
HIS
17
A
HIS
4
1
Y
1
A
HIS
18
A
HIS
5
1
Y
1
A
HIS
19
A
HIS
6
1
Y
1
A
HIS
20
A
HIS
7
1
Y
1
A
HIS
21
A
HIS
8
1
Y
1
A
GLY
22
A
GLY
9
1
Y
1
A
SER
23
A
SER
10
1
Y
1
A
LEU
24
A
LEU
11
1
Y
1
A
VAL
25
A
VAL
12
1
Y
1
A
PRO
26
A
PRO
13
1
Y
1
A
ARG
27
A
ARG
14
1
Y
1
A
GLY
28
A
GLY
15
1
Y
1
A
SER
29
A
SER
16
1
Y
1
A
ARG
30
A
ARG
17
1
Y
1
A
SER
31
A
SER
18
1
Y
1
A
HIS
197
A
HIS
184
1
Y
1
A
LYS
198
A
LYS
185
1
Y
1
A
LEU
199
A
LEU
186
1
Y
1
A
LYS
200
A
LYS
187
1
Y
1
A
SER
201
A
SER
188
1
Y
1
A
HIS
202
A
HIS
189
1
Y
1
8.04
1.20
103.30
111.34
A
A
A
N
CA
CB
PRO
PRO
PRO
182
182
182
N
1
A
ASN
43
87.61
4.97
1
A
LYS
149
71.95
34.84
1
A
HIS
187
-126.76
-52.39
22.211
-0.43
-0.21
0.00
-0.43
0.00
0.64
0.953
0.937
HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS
0.21794
0.18946
0.207
0.19082
1.81
8.00
879
17435
16353
5.1
97.52
2.264
0.072
RANDOM
1
THROUGHOUT
0
MOLECULAR REPLACEMENT
0.127
0.119
0.80
0.80
1.20
Polyalanine Rab5c GTPase
MAXIMUM LIKELIHOOD
BABINET MODEL WITH MASK
1.81
8.00
111
1413
33
0
1269
0.008
0.022
1330
0.001
0.020
1196
1.275
1.958
1812
0.826
3.000
2759
5.458
5.000
164
34.740
22.982
57
12.230
15.000
205
15.906
15.000
9
0.078
0.200
204
0.003
0.020
1472
0.001
0.020
283
0.205
0.200
240
0.182
0.200
1149
0.175
0.200
646
0.082
0.200
716
0.129
0.200
92
0.096
0.200
1
0.096
0.200
3
0.261
0.200
31
0.131
0.200
16
0.965
1.500
1072
0.123
1.500
335
1.059
2.000
1313
1.349
3.000
609
1.915
4.500
499
0.261
0.215
1.850
66
1084
20
93.12
31.5
1.80
50
1Z06
17431
0
0
0.057
1
29.0
5
96.7
1.80
1.85
7.7
1240
0.249
5
84.2
refinement
REFMAC
5.2.0005
data reduction
DENZO
data scaling
SCALEPACK
phasing
AMoRE
GppNHp-Bound Rab33 GTPase
1
N
N
2
N
N
3
N
N
4
N
N
A
GLY
45
A
GLY
32
HELX_P
A
GLY
56
A
GLY
43
1
1
12
A
GLN
92
A
GLN
79
HELX_P
A
LYS
97
A
LYS
84
1
2
6
A
MET
99
A
MET
86
HELX_P
A
ARG
105
A
ARG
92
1
3
7
A
ASN
118
A
ASN
105
HELX_P
A
SER
124
A
SER
111
1
4
7
A
SER
124
A
SER
111
HELX_P
A
LEU
136
A
LEU
123
1
5
13
A
LEU
152
A
LEU
139
HELX_P
A
ILE
156
A
ILE
143
5
6
5
A
PRO
159
A
PRO
146
HELX_P
A
HIS
170
A
HIS
157
1
7
12
A
ASN
181
A
ASN
168
HELX_P
A
ASP
186
A
ASP
173
5
8
6
A
HIS
187
A
HIS
174
HELX_P
A
ALA
196
A
ALA
183
1
9
10
metalc
2.018
A
THR
47
A
OG1
THR
34
1_555
A
MG
203
B
MG
MG
1_555
metalc
2.072
A
THR
65
A
OG1
THR
52
1_555
A
MG
203
B
MG
MG
1_555
metalc
2.021
A
MG
203
B
MG
MG
1_555
A
GNP
204
C
O2G
GNP
1_555
metalc
2.003
A
MG
203
B
MG
MG
1_555
A
GNP
204
C
O2B
GNP
1_555
metalc
2.074
A
MG
203
B
MG
MG
1_555
A
HOH
210
D
O
HOH
1_555
metalc
2.068
A
MG
203
B
MG
MG
1_555
A
HOH
218
D
O
HOH
1_555
PROTEIN TRANSPORT
Rab GTPase, Rab33b GTPase, vesicular trafficking, protein transport
RB33B_MOUSE
UNP
1
29
O35963
RSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGERIKIQLWDTAGQERFRKSMVQHYYRNVHA
VVFVYDMTNMASFHSLPAWIEECKQHLLANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLFETSAKNPNDNDHVE
AIFMTLAHKLKSH
29
201
1Z06
30
202
O35963
A
1
17
189
1
cloning artifact
MET
14
1Z06
A
O35963
UNP
1
1
cloning artifact
GLY
15
1Z06
A
O35963
UNP
2
1
cloning artifact
HIS
16
1Z06
A
O35963
UNP
3
1
cloning artifact
HIS
17
1Z06
A
O35963
UNP
4
1
cloning artifact
HIS
18
1Z06
A
O35963
UNP
5
1
cloning artifact
HIS
19
1Z06
A
O35963
UNP
6
1
cloning artifact
HIS
20
1Z06
A
O35963
UNP
7
1
cloning artifact
HIS
21
1Z06
A
O35963
UNP
8
1
cloning artifact
GLY
22
1Z06
A
O35963
UNP
9
1
cloning artifact
SER
23
1Z06
A
O35963
UNP
10
1
cloning artifact
LEU
24
1Z06
A
O35963
UNP
11
1
cloning artifact
VAL
25
1Z06
A
O35963
UNP
12
1
cloning artifact
PRO
26
1Z06
A
O35963
UNP
13
1
cloning artifact
ARG
27
1Z06
A
O35963
UNP
14
1
cloning artifact
GLY
28
1Z06
A
O35963
UNP
15
1
cloning artifact
SER
29
1Z06
A
O35963
UNP
16
6
anti-parallel
parallel
parallel
parallel
parallel
A
PHE
70
A
PHE
57
A
ILE
77
A
ILE
64
A
GLU
80
A
GLU
67
A
ASP
88
A
ASP
75
A
ILE
33
A
ILE
20
A
ILE
39
A
ILE
26
A
ALA
109
A
ALA
96
A
ASP
115
A
ASP
102
A
ARG
143
A
ARG
130
A
ASN
148
A
ASN
135
A
LEU
174
A
LEU
161
A
GLU
176
A
GLU
163
BINDING SITE FOR RESIDUE MG A 203
A
MG
203
Software
5
BINDING SITE FOR RESIDUE GNP A 204
A
GNP
204
Software
27
A
THR
47
A
THR
34
5
1_555
A
THR
65
A
THR
52
5
1_555
A
GNP
204
C
GNP
5
1_555
A
HOH
210
D
HOH
5
1_555
A
HOH
218
D
HOH
5
1_555
A
SER
42
A
SER
29
27
1_555
A
ASN
43
A
ASN
30
27
1_555
A
VAL
44
A
VAL
31
27
1_555
A
GLY
45
A
GLY
32
27
1_555
A
LYS
46
A
LYS
33
27
1_555
A
THR
47
A
THR
34
27
1_555
A
CYS
48
A
CYS
35
27
1_555
A
PHE
58
A
PHE
45
27
1_555
A
THR
62
A
THR
49
27
1_555
A
ALA
64
A
ALA
51
27
1_555
A
THR
65
A
THR
52
27
1_555
A
GLY
91
A
GLY
78
27
1_555
A
ASN
148
A
ASN
135
27
1_555
A
LYS
149
A
LYS
136
27
1_555
A
ASP
151
A
ASP
138
27
1_555
A
LEU
152
A
LEU
139
27
1_555
A
SER
178
A
SER
165
27
1_555
A
ALA
179
A
ALA
166
27
1_555
A
LYS
180
A
LYS
167
27
1_555
A
MG
203
B
MG
27
1_555
A
HOH
210
D
HOH
27
1_555
A
HOH
215
D
HOH
27
1_555
A
HOH
218
D
HOH
27
1_555
A
HOH
227
D
HOH
27
1_555
A
HOH
258
D
HOH
27
1_555
A
HOH
272
D
HOH
27
1_555
A
HOH
285
D
HOH
27
1_555
145
P 32