0.017479 0.000000 0.000000 0.000000 0.015316 0.000000 0.000000 0.000000 0.009123 0.00000 0.00000 0.00000 Trakhanov, S.D. Vyas, N.K. Kristensen, D.M. Ma, J. Quiocho, F.A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 57.210 65.290 109.610 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 R C N 309 N O N 310 N C N 311 N O N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N N N 322 S C N 323 N C N 324 N O N 325 N C Y 326 N C Y 327 N C Y 328 N C Y 329 N N Y 330 N C Y 331 N C Y 332 N C Y 333 N C Y 334 N C N 335 N O N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C Y 353 N C Y 354 N C Y 355 N C Y 356 N C Y 357 N C Y 358 N C N 359 N O N 360 N O N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N N N 373 S C N 374 N C N 375 N O N 376 N C N 377 N C N 378 N C N 379 N O N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N doub N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N doub N 313 N sing N 314 N sing N 315 N sing N 316 N sing Y 317 N doub Y 318 N sing Y 319 N sing N 320 N sing Y 321 N doub Y 322 N sing Y 323 N sing N 324 N sing Y 325 N sing Y 326 N doub N 327 N sing Y 328 N doub N 329 N sing Y 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N doub N 341 N sing N 342 N sing N 343 N sing N 344 N sing Y 345 N doub Y 346 N sing Y 347 N sing N 348 N sing Y 349 N doub N 350 N sing Y 351 N doub N 352 N sing Y 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing US Biochemistry BICHAW 0033 0006-2960 44 6597 6608 10.1021/bi047302o 15850393 Ligand-free and -bound structures of the binding protein (LivJ) of the Escherichia coli ABC leucine/isoleucine/valine transport system: trajectory and dynamics of the interdomain rotation and ligand specificity. 2005 UK J.Mol.Biol. JMOBAK 0070 0022-2836 206 171 191 10.1016/0022-2836(89)90531-7 2649682 Periplasmic binding protein structure and function. Refined X-ray structures of the leucine/isoleucine/valine-binding protein and its complex with leucine. 1989 UK J.Mol.Biol. JMOBAK 0070 0022-2836 206 193 207 10.1016/0022-2836(89)90532-9 2649683 Structure of the L-leucine-binding protein refined at 2.4 A resolution and comparison with the Leu/Ile/Val-binding protein structure 1989 10.2210/pdb1z15/pdb pdb_00001z15 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 293 1 AREA DETECTOR 1990-01-10 SDMS Graphite SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RU200 36812.395 Leu/Ile/Val-binding protein matured protein (residues 24-367) 1 nat polymer 18.015 water 224 nat water LIV-BP no no EDIKVAVVGAMSGPVAQYGDQEFTGAEQAVADINAKGGIKGNKLQIVKYDDACDPKQAVAVANKVVNDGIKYVIGHLCSS STQPASDIYEDEGILMITPAATAPELTARGYQLILRTTGLDSDQGPTAAKYILEKVKPQRIAIVHDKQQYGEGLARAVQD GLKKGNANVVFFDGITAGEKDFSTLVARLKKENIDFVYYGGYHPEMGQILRQARAAGLKTQFMGPEGVANVSLSNIAGES AEGLLVTKPKNYDQVPANKPIVDAIKAKKQDPSGAFVWTTYAALQSLQAGLNQSDDPAEIAKYLKANSVDTVMGPLTWDE KGDLKGFEFGVFDWHANGTATDAK EDIKVAVVGAMSGPVAQYGDQEFTGAEQAVADINAKGGIKGNKLQIVKYDDACDPKQAVAVANKVVNDGIKYVIGHLCSS STQPASDIYEDEGILMITPAATAPELTARGYQLILRTTGLDSDQGPTAAKYILEKVKPQRIAIVHDKQQYGEGLARAVQD GLKKGNANVVFFDGITAGEKDFSTLVARLKKENIDFVYYGGYHPEMGQILRQARAAGLKTQFMGPEGVANVSLSNIAGES AEGLLVTKPKNYDQVPANKPIVDAIKAKKQDPSGAFVWTTYAALQSLQAGLNQSDDPAEIAKYLKANSVDTVMGPLTWDE KGDLKGFEFGVFDWHANGTATDAK A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Periplasmic Escherichia sample 83333 Escherichia coli Escherichia coli K12 1 2.74 55 MICRODIALYSIS 7.3 12.5% PEG 6000, potassium chloride, sodium choloride, sodium azide, potassium acetate, sodium citrate, pH 7.3, MICRODIALYSIS, temperature 293K 293 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model repository Initial release Version format compliance Source and taxonomy Version format compliance Data collection Database references Refinement description 1 0 2005-10-04 1 1 2008-04-30 1 2 2011-07-13 1 3 2023-08-23 _database_2.pdbx_DOI _database_2.pdbx_database_accession 2LIV is the same structure but in less open form. 2LBP is a leucine specific protein but its overall structure is similar to 2LIV. SEQUENCE This sequence occurs with n-terminal leader sequence, which is modified post translation to produce a mature protein RCSB Y RCSB 2005-03-03 REL HOH water 2LIV PDB ENTRY 2LIV PDB experimental model HOH 501 2 HOH HOH 501 A HOH 502 2 HOH HOH 502 A HOH 503 2 HOH HOH 503 A HOH 504 2 HOH HOH 504 A HOH 505 2 HOH HOH 505 A HOH 506 2 HOH HOH 506 A HOH 507 2 HOH HOH 507 A HOH 508 2 HOH HOH 508 A HOH 509 2 HOH HOH 509 A HOH 510 2 HOH HOH 510 A HOH 511 2 HOH HOH 511 A HOH 512 2 HOH HOH 512 A HOH 513 2 HOH HOH 513 A HOH 514 2 HOH HOH 514 A HOH 515 2 HOH HOH 515 A HOH 516 2 HOH HOH 516 A HOH 517 2 HOH HOH 517 A HOH 518 2 HOH HOH 518 A HOH 519 2 HOH HOH 519 A HOH 520 2 HOH HOH 520 A HOH 521 2 HOH HOH 521 A HOH 522 2 HOH HOH 522 A HOH 523 2 HOH HOH 523 A HOH 524 2 HOH HOH 524 A HOH 525 2 HOH HOH 525 A HOH 526 2 HOH HOH 526 A HOH 527 2 HOH HOH 527 A HOH 528 2 HOH HOH 528 A HOH 529 2 HOH HOH 529 A HOH 530 2 HOH HOH 530 A HOH 531 2 HOH HOH 531 A HOH 532 2 HOH HOH 532 A HOH 533 2 HOH HOH 533 A HOH 534 2 HOH HOH 534 A HOH 535 2 HOH HOH 535 A HOH 536 2 HOH HOH 536 A HOH 537 2 HOH HOH 537 A HOH 538 2 HOH HOH 538 A HOH 539 2 HOH HOH 539 A HOH 540 2 HOH HOH 540 A HOH 541 2 HOH HOH 541 A HOH 542 2 HOH HOH 542 A HOH 543 2 HOH HOH 543 A HOH 544 2 HOH HOH 544 A HOH 545 2 HOH HOH 545 A HOH 546 2 HOH HOH 546 A HOH 547 2 HOH HOH 547 A HOH 548 2 HOH HOH 548 A HOH 549 2 HOH HOH 549 A HOH 550 2 HOH HOH 550 A HOH 551 2 HOH HOH 551 A HOH 552 2 HOH HOH 552 A HOH 553 2 HOH HOH 553 A HOH 554 2 HOH HOH 554 A HOH 555 2 HOH HOH 555 A HOH 556 2 HOH HOH 556 A HOH 557 2 HOH HOH 557 A HOH 558 2 HOH HOH 558 A HOH 559 2 HOH HOH 559 A HOH 560 2 HOH HOH 560 A HOH 561 2 HOH HOH 561 A HOH 562 2 HOH HOH 562 A HOH 563 2 HOH HOH 563 A HOH 564 2 HOH HOH 564 A HOH 565 2 HOH HOH 565 A HOH 566 2 HOH HOH 566 A HOH 567 2 HOH HOH 567 A HOH 568 2 HOH HOH 568 A HOH 569 2 HOH HOH 569 A HOH 570 2 HOH HOH 570 A HOH 571 2 HOH HOH 571 A HOH 572 2 HOH HOH 572 A HOH 573 2 HOH HOH 573 A HOH 574 2 HOH HOH 574 A HOH 575 2 HOH HOH 575 A HOH 576 2 HOH HOH 576 A HOH 577 2 HOH HOH 577 A HOH 578 2 HOH HOH 578 A HOH 579 2 HOH HOH 579 A HOH 580 2 HOH HOH 580 A HOH 581 2 HOH HOH 581 A HOH 582 2 HOH HOH 582 A HOH 583 2 HOH HOH 583 A HOH 584 2 HOH HOH 584 A HOH 585 2 HOH HOH 585 A HOH 586 2 HOH HOH 586 A HOH 587 2 HOH HOH 587 A HOH 588 2 HOH HOH 588 A HOH 589 2 HOH HOH 589 A HOH 590 2 HOH HOH 590 A HOH 591 2 HOH HOH 591 A HOH 592 2 HOH HOH 592 A HOH 593 2 HOH HOH 593 A HOH 594 2 HOH HOH 594 A HOH 595 2 HOH HOH 595 A HOH 596 2 HOH HOH 596 A HOH 597 2 HOH HOH 597 A HOH 598 2 HOH HOH 598 A HOH 599 2 HOH HOH 599 A HOH 600 2 HOH HOH 600 A HOH 601 2 HOH HOH 601 A HOH 602 2 HOH HOH 602 A HOH 603 2 HOH HOH 603 A HOH 604 2 HOH HOH 604 A HOH 605 2 HOH HOH 605 A HOH 606 2 HOH HOH 606 A HOH 607 2 HOH HOH 607 A HOH 608 2 HOH HOH 608 A HOH 609 2 HOH HOH 609 A HOH 610 2 HOH HOH 610 A HOH 611 2 HOH HOH 611 A HOH 612 2 HOH HOH 612 A HOH 613 2 HOH HOH 613 A HOH 614 2 HOH HOH 614 A HOH 615 2 HOH HOH 615 A HOH 616 2 HOH HOH 616 A HOH 617 2 HOH HOH 617 A HOH 618 2 HOH HOH 618 A HOH 619 2 HOH HOH 619 A HOH 620 2 HOH HOH 620 A HOH 621 2 HOH HOH 621 A HOH 622 2 HOH HOH 622 A HOH 623 2 HOH HOH 623 A HOH 624 2 HOH HOH 624 A HOH 625 2 HOH HOH 625 A HOH 626 2 HOH HOH 626 A HOH 627 2 HOH HOH 627 A HOH 628 2 HOH HOH 628 A HOH 629 2 HOH HOH 629 A HOH 630 2 HOH HOH 630 A HOH 631 2 HOH HOH 631 A HOH 632 2 HOH HOH 632 A HOH 633 2 HOH HOH 633 A HOH 634 2 HOH HOH 634 A HOH 635 2 HOH HOH 635 A HOH 636 2 HOH HOH 636 A HOH 637 2 HOH HOH 637 A HOH 638 2 HOH HOH 638 A HOH 639 2 HOH HOH 639 A HOH 640 2 HOH HOH 640 A HOH 641 2 HOH HOH 641 A HOH 642 2 HOH HOH 642 A HOH 643 2 HOH HOH 643 A HOH 644 2 HOH HOH 644 A HOH 645 2 HOH HOH 645 A HOH 646 2 HOH HOH 646 A HOH 647 2 HOH HOH 647 A HOH 648 2 HOH HOH 648 A HOH 649 2 HOH HOH 649 A HOH 650 2 HOH HOH 650 A HOH 651 2 HOH HOH 651 A HOH 652 2 HOH HOH 652 A HOH 653 2 HOH HOH 653 A HOH 654 2 HOH HOH 654 A HOH 655 2 HOH HOH 655 A HOH 656 2 HOH HOH 656 A HOH 657 2 HOH HOH 657 A HOH 658 2 HOH HOH 658 A HOH 659 2 HOH HOH 659 A HOH 660 2 HOH HOH 660 A HOH 661 2 HOH HOH 661 A HOH 662 2 HOH HOH 662 A HOH 663 2 HOH HOH 663 A HOH 664 2 HOH HOH 664 A HOH 665 2 HOH HOH 665 A HOH 666 2 HOH HOH 666 A HOH 667 2 HOH HOH 667 A HOH 668 2 HOH HOH 668 A HOH 669 2 HOH HOH 669 A HOH 670 2 HOH HOH 670 A HOH 671 2 HOH HOH 671 A HOH 672 2 HOH HOH 672 A HOH 673 2 HOH HOH 673 A HOH 674 2 HOH HOH 674 A HOH 675 2 HOH HOH 675 A HOH 676 2 HOH HOH 676 A HOH 677 2 HOH HOH 677 A HOH 678 2 HOH HOH 678 A HOH 679 2 HOH HOH 679 A HOH 680 2 HOH HOH 680 A HOH 681 2 HOH HOH 681 A HOH 682 2 HOH HOH 682 A HOH 683 2 HOH HOH 683 A HOH 684 2 HOH HOH 684 A HOH 685 2 HOH HOH 685 A HOH 686 2 HOH HOH 686 A HOH 687 2 HOH HOH 687 A HOH 688 2 HOH HOH 688 A HOH 689 2 HOH HOH 689 A HOH 690 2 HOH HOH 690 A HOH 691 2 HOH HOH 691 A HOH 692 2 HOH HOH 692 A HOH 693 2 HOH HOH 693 A HOH 694 2 HOH HOH 694 A HOH 695 2 HOH HOH 695 A HOH 696 2 HOH HOH 696 A HOH 697 2 HOH HOH 697 A HOH 698 2 HOH HOH 698 A HOH 699 2 HOH HOH 699 A HOH 700 2 HOH HOH 700 A HOH 701 2 HOH HOH 701 A HOH 702 2 HOH HOH 702 A HOH 703 2 HOH HOH 703 A HOH 704 2 HOH HOH 704 A HOH 705 2 HOH HOH 705 A HOH 706 2 HOH HOH 706 A HOH 707 2 HOH HOH 707 A HOH 708 2 HOH HOH 708 A HOH 709 2 HOH HOH 709 A HOH 710 2 HOH HOH 710 A HOH 711 2 HOH HOH 711 A HOH 712 2 HOH HOH 712 A HOH 713 2 HOH HOH 713 A HOH 714 2 HOH HOH 714 A HOH 715 2 HOH HOH 715 A HOH 716 2 HOH HOH 716 A HOH 717 2 HOH HOH 717 A HOH 718 2 HOH HOH 718 A HOH 719 2 HOH HOH 719 A HOH 720 2 HOH HOH 720 A HOH 721 2 HOH HOH 721 A HOH 722 2 HOH HOH 722 A HOH 723 2 HOH HOH 723 A HOH 724 2 HOH HOH 724 A GLU 1 n 1 GLU 1 A ASP 2 n 2 ASP 2 A ILE 3 n 3 ILE 3 A LYS 4 n 4 LYS 4 A VAL 5 n 5 VAL 5 A ALA 6 n 6 ALA 6 A VAL 7 n 7 VAL 7 A VAL 8 n 8 VAL 8 A GLY 9 n 9 GLY 9 A ALA 10 n 10 ALA 10 A MET 11 n 11 MET 11 A SER 12 n 12 SER 12 A GLY 13 n 13 GLY 13 A PRO 14 n 14 PRO 14 A VAL 15 n 15 VAL 15 A ALA 16 n 16 ALA 16 A GLN 17 n 17 GLN 17 A TYR 18 n 18 TYR 18 A GLY 19 n 19 GLY 19 A ASP 20 n 20 ASP 20 A GLN 21 n 21 GLN 21 A GLU 22 n 22 GLU 22 A PHE 23 n 23 PHE 23 A THR 24 n 24 THR 24 A GLY 25 n 25 GLY 25 A ALA 26 n 26 ALA 26 A GLU 27 n 27 GLU 27 A GLN 28 n 28 GLN 28 A ALA 29 n 29 ALA 29 A VAL 30 n 30 VAL 30 A ALA 31 n 31 ALA 31 A ASP 32 n 32 ASP 32 A ILE 33 n 33 ILE 33 A ASN 34 n 34 ASN 34 A ALA 35 n 35 ALA 35 A LYS 36 n 36 LYS 36 A GLY 37 n 37 GLY 37 A GLY 38 n 38 GLY 38 A ILE 39 n 39 ILE 39 A LYS 40 n 40 LYS 40 A GLY 41 n 41 GLY 41 A ASN 42 n 42 ASN 42 A LYS 43 n 43 LYS 43 A LEU 44 n 44 LEU 44 A GLN 45 n 45 GLN 45 A ILE 46 n 46 ILE 46 A VAL 47 n 47 VAL 47 A LYS 48 n 48 LYS 48 A TYR 49 n 49 TYR 49 A ASP 50 n 50 ASP 50 A ASP 51 n 51 ASP 51 A ALA 52 n 52 ALA 52 A CYS 53 n 53 CYS 53 A ASP 54 n 54 ASP 54 A PRO 55 n 55 PRO 55 A LYS 56 n 56 LYS 56 A GLN 57 n 57 GLN 57 A ALA 58 n 58 ALA 58 A VAL 59 n 59 VAL 59 A ALA 60 n 60 ALA 60 A VAL 61 n 61 VAL 61 A ALA 62 n 62 ALA 62 A ASN 63 n 63 ASN 63 A LYS 64 n 64 LYS 64 A VAL 65 n 65 VAL 65 A VAL 66 n 66 VAL 66 A ASN 67 n 67 ASN 67 A ASP 68 n 68 ASP 68 A GLY 69 n 69 GLY 69 A ILE 70 n 70 ILE 70 A LYS 71 n 71 LYS 71 A TYR 72 n 72 TYR 72 A VAL 73 n 73 VAL 73 A ILE 74 n 74 ILE 74 A GLY 75 n 75 GLY 75 A HIS 76 n 76 HIS 76 A LEU 77 n 77 LEU 77 A CYS 78 n 78 CYS 78 A SER 79 n 79 SER 79 A SER 80 n 80 SER 80 A SER 81 n 81 SER 81 A THR 82 n 82 THR 82 A GLN 83 n 83 GLN 83 A PRO 84 n 84 PRO 84 A ALA 85 n 85 ALA 85 A SER 86 n 86 SER 86 A ASP 87 n 87 ASP 87 A ILE 88 n 88 ILE 88 A TYR 89 n 89 TYR 89 A GLU 90 n 90 GLU 90 A ASP 91 n 91 ASP 91 A GLU 92 n 92 GLU 92 A GLY 93 n 93 GLY 93 A ILE 94 n 94 ILE 94 A LEU 95 n 95 LEU 95 A MET 96 n 96 MET 96 A ILE 97 n 97 ILE 97 A THR 98 n 98 THR 98 A PRO 99 n 99 PRO 99 A ALA 100 n 100 ALA 100 A ALA 101 n 101 ALA 101 A THR 102 n 102 THR 102 A ALA 103 n 103 ALA 103 A PRO 104 n 104 PRO 104 A GLU 105 n 105 GLU 105 A LEU 106 n 106 LEU 106 A THR 107 n 107 THR 107 A ALA 108 n 108 ALA 108 A ARG 109 n 109 ARG 109 A GLY 110 n 110 GLY 110 A TYR 111 n 111 TYR 111 A GLN 112 n 112 GLN 112 A LEU 113 n 113 LEU 113 A ILE 114 n 114 ILE 114 A LEU 115 n 115 LEU 115 A ARG 116 n 116 ARG 116 A THR 117 n 117 THR 117 A THR 118 n 118 THR 118 A GLY 119 n 119 GLY 119 A LEU 120 n 120 LEU 120 A ASP 121 n 121 ASP 121 A SER 122 n 122 SER 122 A ASP 123 n 123 ASP 123 A GLN 124 n 124 GLN 124 A GLY 125 n 125 GLY 125 A PRO 126 n 126 PRO 126 A THR 127 n 127 THR 127 A ALA 128 n 128 ALA 128 A ALA 129 n 129 ALA 129 A LYS 130 n 130 LYS 130 A TYR 131 n 131 TYR 131 A ILE 132 n 132 ILE 132 A LEU 133 n 133 LEU 133 A GLU 134 n 134 GLU 134 A LYS 135 n 135 LYS 135 A VAL 136 n 136 VAL 136 A LYS 137 n 137 LYS 137 A PRO 138 n 138 PRO 138 A GLN 139 n 139 GLN 139 A ARG 140 n 140 ARG 140 A ILE 141 n 141 ILE 141 A ALA 142 n 142 ALA 142 A ILE 143 n 143 ILE 143 A VAL 144 n 144 VAL 144 A HIS 145 n 145 HIS 145 A ASP 146 n 146 ASP 146 A LYS 147 n 147 LYS 147 A GLN 148 n 148 GLN 148 A GLN 149 n 149 GLN 149 A TYR 150 n 150 TYR 150 A GLY 151 n 151 GLY 151 A GLU 152 n 152 GLU 152 A GLY 153 n 153 GLY 153 A LEU 154 n 154 LEU 154 A ALA 155 n 155 ALA 155 A ARG 156 n 156 ARG 156 A ALA 157 n 157 ALA 157 A VAL 158 n 158 VAL 158 A GLN 159 n 159 GLN 159 A ASP 160 n 160 ASP 160 A GLY 161 n 161 GLY 161 A LEU 162 n 162 LEU 162 A LYS 163 n 163 LYS 163 A LYS 164 n 164 LYS 164 A GLY 165 n 165 GLY 165 A ASN 166 n 166 ASN 166 A ALA 167 n 167 ALA 167 A ASN 168 n 168 ASN 168 A VAL 169 n 169 VAL 169 A VAL 170 n 170 VAL 170 A PHE 171 n 171 PHE 171 A PHE 172 n 172 PHE 172 A ASP 173 n 173 ASP 173 A GLY 174 n 174 GLY 174 A ILE 175 n 175 ILE 175 A THR 176 n 176 THR 176 A ALA 177 n 177 ALA 177 A GLY 178 n 178 GLY 178 A GLU 179 n 179 GLU 179 A LYS 180 n 180 LYS 180 A ASP 181 n 181 ASP 181 A PHE 182 n 182 PHE 182 A SER 183 n 183 SER 183 A THR 184 n 184 THR 184 A LEU 185 n 185 LEU 185 A VAL 186 n 186 VAL 186 A ALA 187 n 187 ALA 187 A ARG 188 n 188 ARG 188 A LEU 189 n 189 LEU 189 A LYS 190 n 190 LYS 190 A LYS 191 n 191 LYS 191 A GLU 192 n 192 GLU 192 A ASN 193 n 193 ASN 193 A ILE 194 n 194 ILE 194 A ASP 195 n 195 ASP 195 A PHE 196 n 196 PHE 196 A VAL 197 n 197 VAL 197 A TYR 198 n 198 TYR 198 A TYR 199 n 199 TYR 199 A GLY 200 n 200 GLY 200 A GLY 201 n 201 GLY 201 A TYR 202 n 202 TYR 202 A HIS 203 n 203 HIS 203 A PRO 204 n 204 PRO 204 A GLU 205 n 205 GLU 205 A MET 206 n 206 MET 206 A GLY 207 n 207 GLY 207 A GLN 208 n 208 GLN 208 A ILE 209 n 209 ILE 209 A LEU 210 n 210 LEU 210 A ARG 211 n 211 ARG 211 A GLN 212 n 212 GLN 212 A ALA 213 n 213 ALA 213 A ARG 214 n 214 ARG 214 A ALA 215 n 215 ALA 215 A ALA 216 n 216 ALA 216 A GLY 217 n 217 GLY 217 A LEU 218 n 218 LEU 218 A LYS 219 n 219 LYS 219 A THR 220 n 220 THR 220 A GLN 221 n 221 GLN 221 A PHE 222 n 222 PHE 222 A MET 223 n 223 MET 223 A GLY 224 n 224 GLY 224 A PRO 225 n 225 PRO 225 A GLU 226 n 226 GLU 226 A GLY 227 n 227 GLY 227 A VAL 228 n 228 VAL 228 A ALA 229 n 229 ALA 229 A ASN 230 n 230 ASN 230 A VAL 231 n 231 VAL 231 A SER 232 n 232 SER 232 A LEU 233 n 233 LEU 233 A SER 234 n 234 SER 234 A ASN 235 n 235 ASN 235 A ILE 236 n 236 ILE 236 A ALA 237 n 237 ALA 237 A GLY 238 n 238 GLY 238 A GLU 239 n 239 GLU 239 A SER 240 n 240 SER 240 A ALA 241 n 241 ALA 241 A GLU 242 n 242 GLU 242 A GLY 243 n 243 GLY 243 A LEU 244 n 244 LEU 244 A LEU 245 n 245 LEU 245 A VAL 246 n 246 VAL 246 A THR 247 n 247 THR 247 A LYS 248 n 248 LYS 248 A PRO 249 n 249 PRO 249 A LYS 250 n 250 LYS 250 A ASN 251 n 251 ASN 251 A TYR 252 n 252 TYR 252 A ASP 253 n 253 ASP 253 A GLN 254 n 254 GLN 254 A VAL 255 n 255 VAL 255 A PRO 256 n 256 PRO 256 A ALA 257 n 257 ALA 257 A ASN 258 n 258 ASN 258 A LYS 259 n 259 LYS 259 A PRO 260 n 260 PRO 260 A ILE 261 n 261 ILE 261 A VAL 262 n 262 VAL 262 A ASP 263 n 263 ASP 263 A ALA 264 n 264 ALA 264 A ILE 265 n 265 ILE 265 A LYS 266 n 266 LYS 266 A ALA 267 n 267 ALA 267 A LYS 268 n 268 LYS 268 A LYS 269 n 269 LYS 269 A GLN 270 n 270 GLN 270 A ASP 271 n 271 ASP 271 A PRO 272 n 272 PRO 272 A SER 273 n 273 SER 273 A GLY 274 n 274 GLY 274 A ALA 275 n 275 ALA 275 A PHE 276 n 276 PHE 276 A VAL 277 n 277 VAL 277 A TRP 278 n 278 TRP 278 A THR 279 n 279 THR 279 A THR 280 n 280 THR 280 A TYR 281 n 281 TYR 281 A ALA 282 n 282 ALA 282 A ALA 283 n 283 ALA 283 A LEU 284 n 284 LEU 284 A GLN 285 n 285 GLN 285 A SER 286 n 286 SER 286 A LEU 287 n 287 LEU 287 A GLN 288 n 288 GLN 288 A ALA 289 n 289 ALA 289 A GLY 290 n 290 GLY 290 A LEU 291 n 291 LEU 291 A ASN 292 n 292 ASN 292 A GLN 293 n 293 GLN 293 A SER 294 n 294 SER 294 A ASP 295 n 295 ASP 295 A ASP 296 n 296 ASP 296 A PRO 297 n 297 PRO 297 A ALA 298 n 298 ALA 298 A GLU 299 n 299 GLU 299 A ILE 300 n 300 ILE 300 A ALA 301 n 301 ALA 301 A LYS 302 n 302 LYS 302 A TYR 303 n 303 TYR 303 A LEU 304 n 304 LEU 304 A LYS 305 n 305 LYS 305 A ALA 306 n 306 ALA 306 A ASN 307 n 307 ASN 307 A SER 308 n 308 SER 308 A VAL 309 n 309 VAL 309 A ASP 310 n 310 ASP 310 A THR 311 n 311 THR 311 A VAL 312 n 312 VAL 312 A MET 313 n 313 MET 313 A GLY 314 n 314 GLY 314 A PRO 315 n 315 PRO 315 A LEU 316 n 316 LEU 316 A THR 317 n 317 THR 317 A TRP 318 n 318 TRP 318 A ASP 319 n 319 ASP 319 A GLU 320 n 320 GLU 320 A LYS 321 n 321 LYS 321 A GLY 322 n 322 GLY 322 A ASP 323 n 323 ASP 323 A LEU 324 n 324 LEU 324 A LYS 325 n 325 LYS 325 A GLY 326 n 326 GLY 326 A PHE 327 n 327 PHE 327 A GLU 328 n 328 GLU 328 A PHE 329 n 329 PHE 329 A GLY 330 n 330 GLY 330 A VAL 331 n 331 VAL 331 A PHE 332 n 332 PHE 332 A ASP 333 n 333 ASP 333 A TRP 334 n 334 TRP 334 A HIS 335 n 335 HIS 335 A ALA 336 n 336 ALA 336 A ASN 337 n 337 ASN 337 A GLY 338 n 338 GLY 338 A THR 339 n 339 THR 339 A ALA 340 n 340 ALA 340 A THR 341 n 341 THR 341 A ASP 342 n 342 ASP 342 A ALA 343 n 343 ALA 343 A LYS 344 n 344 LYS 344 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O GLN 45 A O GLN 45 A N VAL 5 A N VAL 5 A N ALA 6 A N ALA 6 A O ILE 74 A O ILE 74 A N VAL 73 A N VAL 73 A O LEU 95 A O LEU 95 A N THR 98 A N THR 98 A O LEU 115 A O LEU 115 A O ASP 173 A O ASP 173 A N ILE 143 A N ILE 143 A N VAL 144 A N VAL 144 A O GLY 200 A O GLY 200 A N TYR 199 A N TYR 199 A O MET 223 A O MET 223 A N GLY 224 A N GLY 224 A O LEU 245 A O LEU 245 A N VAL 246 A N VAL 246 A O PHE 332 A O PHE 332 A N ASP 333 A N ASP 333 A O THR 341 A O THR 341 A N VAL 309 A N VAL 309 A O LEU 316 A O LEU 316 1 A ALA 100 -146.26 -27.27 PROTEIN_REP.PARAM PROTEIN.TOP ION.PARAM WATER.TOP WATER_REP.PARAM ION.TOP 26.1 1.48 0.00 0.00 2.35 0.00 -3.83 0.237 0.004 0.185 1.70 6.00 4319 42957 42957 10.1 95.8 RANDOM 2081291.91 0.000000 1 RESTRAINED THROUGHOUT 0.0 0.0 MOLECULAR REPLACEMENT PDB ENTRY 2LIV Engh & Huber FLAT MODEL 111.766 0.41215 0.24 0.20 5.00 0.27 0.26 1.70 6.00 224 2815 0 0 2591 0.012 1.5 24.5 1.46 1.61 1.50 2.30 2.00 2.91 2.00 4.31 2.50 0.338 0.013 0.312 1.80 662 5861 4177 6 10.1 88.6 17.1 1.7 50.0 1Z15 44773 44773 1.0 1.0 0.069 0.069 1 9.8 4.0 96 0.277 1.70 1.75 1.9 4655 0.277 1 4.0 89 refinement CNS 1.1 data reduction SDMS data scaling SDMS phasing MERLOT Crystal structure analysis of periplasmic Leu/Ile/Val-binding protein in superopen form 1 N N 2 N N A VAL 15 A VAL 15 HELX_P A LYS 36 A LYS 36 1 1 22 A ASP 54 A ASP 54 HELX_P A ASP 68 A ASP 68 1 2 15 A CYS 78 A CYS 78 HELX_P A GLY 93 A GLY 93 1 3 16 A ALA 103 A ALA 103 HELX_P A ALA 108 A ALA 108 5 4 6 A LEU 120 A LEU 120 HELX_P A SER 122 A SER 122 5 5 3 A ASP 123 A ASP 123 HELX_P A LYS 135 A LYS 135 1 6 13 A GLN 148 A GLN 148 HELX_P A GLY 165 A GLY 165 1 7 18 A PHE 182 A PHE 182 HELX_P A GLU 192 A GLU 192 1 8 11 A TYR 202 A TYR 202 HELX_P A ALA 216 A ALA 216 1 9 15 A PRO 225 A PRO 225 HELX_P A ALA 229 A ALA 229 5 10 5 A ASN 230 A ASN 230 HELX_P A GLY 238 A GLY 238 1 11 9 A GLU 239 A GLU 239 HELX_P A GLU 242 A GLU 242 5 12 4 A ASN 251 A ASN 251 HELX_P A ALA 257 A ALA 257 5 13 7 A ASN 258 A ASN 258 HELX_P A LYS 268 A LYS 268 1 14 11 A GLY 274 A GLY 274 HELX_P A ASN 292 A ASN 292 1 15 19 A ASP 296 A ASP 296 HELX_P A ASN 307 A ASN 307 1 16 12 disulf 2.191 A CYS 53 A SG CYS 53 1_555 A CYS 78 A SG CYS 78 1_555 TRANSPORT PROTEIN periplasmic binding proteins, alpha-beta fold, aliphatic amino acid binding protein, TRANSPORT PROTEIN A GLY 75 A GLY 75 1 A HIS 76 A HIS 76 -12.68 LIVJ_ECOLI UNP 1 24 P02917 EDIKVAVVGAMSGPVAQYGDQEFTGAEQAVADINAKGGIKGNKLQIVKYDDACDPKQAVAVANKVVNDGIKYVIGHLCSS STQPASDIYEDEGILMITPAATAPELTARGYQLILRTTGLDSDQGPTAAKYILEKVKPQRIAIVHDKQQYGEGLARAVQD GLKKGNANVVFFDGITAGEKDFSTLVARLKKENIDFVYYGGYHPEMGQILRQARAAGLKTQFMGPEGVANVSLSNIAGES AEGLLVTKPKNYDQVPANKPIVDAIKAKKQDPSGAFVWTTYAALQSLQAGLNQSDDPAEIAKYLKANSVDTVMGPLTWDE KGDLKGFEFGVFDWHANGTATDAK 24 367 1Z15 1 344 P02917 A 1 1 344 5 7 2 parallel parallel parallel parallel parallel parallel parallel parallel anti-parallel anti-parallel anti-parallel A LEU 44 A LEU 44 A ASP 50 A ASP 50 A ILE 3 A ILE 3 A GLY 9 A GLY 9 A TYR 72 A TYR 72 A ILE 74 A ILE 74 A LEU 95 A LEU 95 A THR 98 A THR 98 A ILE 114 A ILE 114 A ARG 116 A ARG 116 A VAL 169 A VAL 169 A GLY 174 A GLY 174 A ILE 141 A ILE 141 A HIS 145 A HIS 145 A PHE 196 A PHE 196 A GLY 200 A GLY 200 A GLN 221 A GLN 221 A GLY 224 A GLY 224 A LEU 245 A LEU 245 A LYS 248 A LYS 248 A GLY 330 A GLY 330 A TRP 334 A TRP 334 A ALA 340 A ALA 340 A ASP 342 A ASP 342 A VAL 309 A VAL 309 A THR 311 A THR 311 A GLY 314 A GLY 314 A LEU 316 A LEU 316 19 P 21 21 21