0.026254
0.015158
0.000000
0.000000
0.030315
0.000000
0.000000
0.000000
0.005367
0.00000
0.00000
0.00000
Dong, A.
Bernstein, G.
Schuetz, A.
Antoshenko, T.
Wu, H.
Loppnau, P.
Sundstrom, M.
Arrowsmith, C.
Edwards, A.
Bochkarev, A.
Plotnikov, A.
Structural Genomics Consortium (SGC)
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
38.090
38.090
186.340
C23 H38 N7 O17 P3 S
809.571
ACETYL COENZYME *A
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
Y
1
N
N
Y
2
N
C
Y
3
N
N
Y
4
N
C
Y
5
N
C
Y
6
N
C
N
7
N
N
Y
8
N
N
Y
9
N
C
Y
10
N
N
N
11
R
C
N
12
R
C
N
13
N
O
N
14
S
C
N
15
N
O
N
16
N
P
N
17
N
O
N
18
N
O
N
19
N
O
N
20
R
C
N
21
N
O
N
22
N
C
N
23
N
O
N
24
S
P
N
25
N
O
N
26
N
O
N
27
N
O
N
28
S
P
N
29
N
O
N
30
N
O
N
31
N
O
N
32
N
C
N
33
N
C
N
34
N
C
N
35
N
C
N
36
R
C
N
37
N
O
N
38
N
C
N
39
N
O
N
40
N
N
N
41
N
C
N
42
N
C
N
43
N
C
N
44
N
O
N
45
N
N
N
46
N
C
N
47
N
C
N
48
N
S
N
49
N
C
N
50
N
O
N
51
N
C
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
H
N
75
N
H
N
76
N
H
N
77
N
H
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
N
N
91
S
C
N
92
N
C
N
93
N
O
N
94
N
C
N
95
N
O
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
N
N
104
S
C
N
105
N
C
N
106
N
O
N
107
N
C
N
108
N
C
N
109
N
C
N
110
N
N
N
111
N
C
N
112
N
N
N
113
N
N
N
114
N
O
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
N
N
131
S
C
N
132
N
C
N
133
N
O
N
134
N
C
N
135
N
C
N
136
N
O
N
137
N
N
N
138
N
O
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
N
N
148
S
C
N
149
N
C
N
150
N
O
N
151
N
C
N
152
N
C
N
153
N
O
N
154
N
O
N
155
N
O
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
N
N
164
R
C
N
165
N
C
N
166
N
O
N
167
N
C
N
168
N
S
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
N
N
178
S
C
N
179
N
C
N
180
N
O
N
181
N
C
N
182
N
C
N
183
N
C
N
184
N
O
N
185
N
N
N
186
N
O
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
N
N
198
S
C
N
199
N
C
N
200
N
O
N
201
N
C
N
202
N
C
N
203
N
C
N
204
N
O
N
205
N
O
N
206
N
O
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
N
N
217
N
C
N
218
N
C
N
219
N
O
N
220
N
O
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
N
N
227
S
C
N
228
N
C
N
229
N
O
N
230
N
C
Y
231
N
C
Y
232
N
N
Y
233
N
C
Y
234
N
C
Y
235
N
N
N
236
N
O
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
O
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
S
C
N
255
N
C
N
256
N
C
N
257
N
C
N
258
N
O
N
259
N
H
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
N
N
273
S
C
N
274
N
C
N
275
N
O
N
276
N
C
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
N
N
295
S
C
N
296
N
C
N
297
N
O
N
298
N
C
N
299
N
C
N
300
N
C
N
301
N
C
N
302
N
N
N
303
N
O
N
304
N
H
N
305
N
H
N
306
N
H
N
307
N
H
N
308
N
H
N
309
N
H
N
310
N
H
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
N
N
320
S
C
N
321
N
C
N
322
N
O
N
323
N
C
N
324
N
C
N
325
N
S
N
326
N
C
N
327
N
O
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
N
N
340
S
C
N
341
N
C
N
342
N
O
N
343
N
C
Y
344
N
C
Y
345
N
C
Y
346
N
C
Y
347
N
C
Y
348
N
C
Y
349
N
C
N
350
N
O
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
N
N
363
S
C
N
364
N
C
N
365
N
O
N
366
N
C
N
367
N
C
N
368
N
C
N
369
N
O
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
H
N
379
N
N
N
380
S
C
N
381
N
C
N
382
N
O
N
383
N
C
N
384
N
O
N
385
N
O
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
N
N
394
S
C
N
395
N
C
N
396
N
O
N
397
R
C
N
398
N
O
N
399
N
C
N
400
N
O
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
N
N
411
S
C
N
412
N
C
N
413
N
O
N
414
N
C
Y
415
N
C
Y
416
N
C
Y
417
N
C
Y
418
N
N
Y
419
N
C
Y
420
N
C
Y
421
N
C
Y
422
N
C
Y
423
N
C
N
424
N
O
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
N
N
438
S
C
N
439
N
C
N
440
N
O
N
441
N
C
Y
442
N
C
Y
443
N
C
Y
444
N
C
Y
445
N
C
Y
446
N
C
Y
447
N
C
N
448
N
O
N
449
N
O
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
N
N
462
S
C
N
463
N
C
N
464
N
O
N
465
N
C
N
466
N
C
N
467
N
C
N
468
N
O
N
469
N
H
N
470
N
H
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
Y
1
N
sing
Y
2
N
doub
Y
3
N
doub
N
4
N
sing
Y
5
N
sing
Y
6
N
doub
Y
7
N
sing
Y
8
N
sing
Y
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
Y
13
N
doub
Y
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
doub
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
doub
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
doub
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
doub
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
doub
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
doub
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
doub
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
doub
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
doub
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
doub
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
doub
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
doub
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
doub
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
doub
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
doub
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
Y
231
N
sing
Y
232
N
doub
Y
233
N
doub
N
234
N
sing
Y
235
N
sing
N
236
N
sing
Y
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
doub
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
doub
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
doub
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
doub
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
doub
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
Y
339
N
doub
Y
340
N
sing
Y
341
N
sing
N
342
N
sing
Y
343
N
doub
N
344
N
sing
Y
345
N
doub
N
346
N
sing
Y
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
doub
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
doub
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
doub
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
doub
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
Y
408
N
doub
Y
409
N
sing
Y
410
N
sing
N
411
N
sing
Y
412
N
doub
Y
413
N
sing
Y
414
N
sing
N
415
N
sing
Y
416
N
sing
Y
417
N
doub
N
418
N
sing
Y
419
N
doub
N
420
N
sing
Y
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
doub
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
Y
436
N
doub
Y
437
N
sing
Y
438
N
sing
N
439
N
sing
Y
440
N
doub
N
441
N
sing
Y
442
N
doub
N
443
N
sing
Y
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
doub
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
US
Proteins
PSFGEY
0867
0887-3585
68
403
407
10.1002/prot.21407
17410582
Crystal structure of a binary complex between human GCN5 histone acetyltransferase domain and acetyl coenzyme A
2007
10.2210/pdb1z4r/pdb
pdb_00001z4r
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
VeriMax
IMAGE PLATE
2005-03-08
RIGAKU RAXIS IV
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU FR-E
19406.660
General control of amino acid synthesis protein 5-like 2
2.3.1.48
Residues 497-662
1
man
polymer
809.571
ACETYL COENZYME *A
1
syn
non-polymer
18.015
water
131
nat
water
Histone acetyltransferase GCN5, hsGCN5, STAF97
no
no
GSGIIEFHVIGNSLTPKANRRVLLWLVGLQNVFSHQLPRMPKEYIARLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFT
EIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSKDIKVPKSRYLGYIKDYEGATLMECE
LNPRIPYT
GSGIIEFHVIGNSLTPKANRRVLLWLVGLQNVFSHQLPRMPKEYIARLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFT
EIVFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSKDIKVPKSRYLGYIKDYEGATLMECE
LNPRIPYT
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
human
Homo
Escherichia
sample
GCN5
9606
Homo sapiens
562
Escherichia coli
1
2.5
50
VAPOR DIFFUSION
7.0
15% (v/v) ethanol, 100 mM Tris, pH 7.0, VAPOR DIFFUSION, temperature 300K
300
Structural Genomics Consortium
SGC
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Refinement description
1
0
2005-03-29
1
1
2008-04-30
1
2
2011-07-13
1
3
2023-08-23
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
RCSB
Y
RCSB
2005-03-16
REL
REL
ACO
ACETYL COENZYME *A
HOH
water
1YGH
PDB
experimental model
COA
401
2
ACO
ACO
401
A
HOH
1000
3
HOH
HOH
1000
A
HOH
1001
3
HOH
HOH
1001
A
HOH
1002
3
HOH
HOH
1002
A
HOH
1003
3
HOH
HOH
1003
A
HOH
1004
3
HOH
HOH
1004
A
HOH
1005
3
HOH
HOH
1005
A
HOH
1006
3
HOH
HOH
1006
A
HOH
1007
3
HOH
HOH
1007
A
HOH
1008
3
HOH
HOH
1008
A
HOH
1009
3
HOH
HOH
1009
A
HOH
1010
3
HOH
HOH
1010
A
HOH
1011
3
HOH
HOH
1011
A
HOH
1012
3
HOH
HOH
1012
A
HOH
1013
3
HOH
HOH
1013
A
HOH
1014
3
HOH
HOH
1014
A
HOH
1015
3
HOH
HOH
1015
A
HOH
1016
3
HOH
HOH
1016
A
HOH
1017
3
HOH
HOH
1017
A
HOH
1018
3
HOH
HOH
1018
A
HOH
1019
3
HOH
HOH
1019
A
HOH
1020
3
HOH
HOH
1020
A
HOH
1021
3
HOH
HOH
1021
A
HOH
1022
3
HOH
HOH
1022
A
HOH
1023
3
HOH
HOH
1023
A
HOH
1024
3
HOH
HOH
1024
A
HOH
1025
3
HOH
HOH
1025
A
HOH
1026
3
HOH
HOH
1026
A
HOH
1027
3
HOH
HOH
1027
A
HOH
1028
3
HOH
HOH
1028
A
HOH
1029
3
HOH
HOH
1029
A
HOH
1030
3
HOH
HOH
1030
A
HOH
1031
3
HOH
HOH
1031
A
HOH
1032
3
HOH
HOH
1032
A
HOH
1033
3
HOH
HOH
1033
A
HOH
1034
3
HOH
HOH
1034
A
HOH
1035
3
HOH
HOH
1035
A
HOH
1036
3
HOH
HOH
1036
A
HOH
1037
3
HOH
HOH
1037
A
HOH
1038
3
HOH
HOH
1038
A
HOH
1039
3
HOH
HOH
1039
A
HOH
1040
3
HOH
HOH
1040
A
HOH
1041
3
HOH
HOH
1041
A
HOH
1042
3
HOH
HOH
1042
A
HOH
1043
3
HOH
HOH
1043
A
HOH
1044
3
HOH
HOH
1044
A
HOH
1045
3
HOH
HOH
1045
A
HOH
1046
3
HOH
HOH
1046
A
HOH
1047
3
HOH
HOH
1047
A
HOH
1048
3
HOH
HOH
1048
A
HOH
1049
3
HOH
HOH
1049
A
HOH
1050
3
HOH
HOH
1050
A
HOH
1051
3
HOH
HOH
1051
A
HOH
1052
3
HOH
HOH
1052
A
HOH
1053
3
HOH
HOH
1053
A
HOH
1054
3
HOH
HOH
1054
A
HOH
1055
3
HOH
HOH
1055
A
HOH
1056
3
HOH
HOH
1056
A
HOH
1057
3
HOH
HOH
1057
A
HOH
1058
3
HOH
HOH
1058
A
HOH
1059
3
HOH
HOH
1059
A
HOH
1060
3
HOH
HOH
1060
A
HOH
1061
3
HOH
HOH
1061
A
HOH
1062
3
HOH
HOH
1062
A
HOH
1063
3
HOH
HOH
1063
A
HOH
1064
3
HOH
HOH
1064
A
HOH
1065
3
HOH
HOH
1065
A
HOH
1066
3
HOH
HOH
1066
A
HOH
1067
3
HOH
HOH
1067
A
HOH
1068
3
HOH
HOH
1068
A
HOH
1069
3
HOH
HOH
1069
A
HOH
1070
3
HOH
HOH
1070
A
HOH
1071
3
HOH
HOH
1071
A
HOH
1072
3
HOH
HOH
1072
A
HOH
1073
3
HOH
HOH
1073
A
HOH
1074
3
HOH
HOH
1074
A
HOH
1075
3
HOH
HOH
1075
A
HOH
1076
3
HOH
HOH
1076
A
HOH
1077
3
HOH
HOH
1077
A
HOH
1078
3
HOH
HOH
1078
A
HOH
1079
3
HOH
HOH
1079
A
HOH
1080
3
HOH
HOH
1080
A
HOH
1081
3
HOH
HOH
1081
A
HOH
1082
3
HOH
HOH
1082
A
HOH
1083
3
HOH
HOH
1083
A
HOH
1084
3
HOH
HOH
1084
A
HOH
1085
3
HOH
HOH
1085
A
HOH
1086
3
HOH
HOH
1086
A
HOH
1087
3
HOH
HOH
1087
A
HOH
1088
3
HOH
HOH
1088
A
HOH
1089
3
HOH
HOH
1089
A
HOH
1090
3
HOH
HOH
1090
A
HOH
1091
3
HOH
HOH
1091
A
HOH
1092
3
HOH
HOH
1092
A
HOH
1093
3
HOH
HOH
1093
A
HOH
1094
3
HOH
HOH
1094
A
HOH
1095
3
HOH
HOH
1095
A
HOH
1096
3
HOH
HOH
1096
A
HOH
1097
3
HOH
HOH
1097
A
HOH
1098
3
HOH
HOH
1098
A
HOH
1099
3
HOH
HOH
1099
A
HOH
1100
3
HOH
HOH
1100
A
HOH
1101
3
HOH
HOH
1101
A
HOH
1102
3
HOH
HOH
1102
A
HOH
1103
3
HOH
HOH
1103
A
HOH
1104
3
HOH
HOH
1104
A
HOH
1105
3
HOH
HOH
1105
A
HOH
1106
3
HOH
HOH
1106
A
HOH
1107
3
HOH
HOH
1107
A
HOH
1108
3
HOH
HOH
1108
A
HOH
1109
3
HOH
HOH
1109
A
HOH
1110
3
HOH
HOH
1110
A
HOH
1111
3
HOH
HOH
1111
A
HOH
1112
3
HOH
HOH
1112
A
HOH
1113
3
HOH
HOH
1113
A
HOH
1114
3
HOH
HOH
1114
A
HOH
1115
3
HOH
HOH
1115
A
HOH
1116
3
HOH
HOH
1116
A
HOH
1117
3
HOH
HOH
1117
A
HOH
1118
3
HOH
HOH
1118
A
HOH
1119
3
HOH
HOH
1119
A
HOH
1120
3
HOH
HOH
1120
A
HOH
1121
3
HOH
HOH
1121
A
HOH
1122
3
HOH
HOH
1122
A
HOH
1123
3
HOH
HOH
1123
A
HOH
1124
3
HOH
HOH
1124
A
HOH
1125
3
HOH
HOH
1125
A
HOH
1126
3
HOH
HOH
1126
A
HOH
1127
3
HOH
HOH
1127
A
HOH
1128
3
HOH
HOH
1128
A
HOH
1129
3
HOH
HOH
1129
A
HOH
1130
3
HOH
HOH
1130
A
n
1
495
A
SER
496
n
2
SER
496
A
GLY
497
n
3
GLY
497
A
ILE
498
n
4
ILE
498
A
ILE
499
n
5
ILE
499
A
GLU
500
n
6
GLU
500
A
PHE
501
n
7
PHE
501
A
HIS
502
n
8
HIS
502
A
VAL
503
n
9
VAL
503
A
ILE
504
n
10
ILE
504
A
GLY
505
n
11
GLY
505
A
ASN
506
n
12
ASN
506
A
SER
507
n
13
SER
507
A
LEU
508
n
14
LEU
508
A
THR
509
n
15
THR
509
A
PRO
510
n
16
PRO
510
A
LYS
511
n
17
LYS
511
A
ALA
512
n
18
ALA
512
A
ASN
513
n
19
ASN
513
A
ARG
514
n
20
ARG
514
A
ARG
515
n
21
ARG
515
A
VAL
516
n
22
VAL
516
A
LEU
517
n
23
LEU
517
A
LEU
518
n
24
LEU
518
A
TRP
519
n
25
TRP
519
A
LEU
520
n
26
LEU
520
A
VAL
521
n
27
VAL
521
A
GLY
522
n
28
GLY
522
A
LEU
523
n
29
LEU
523
A
GLN
524
n
30
GLN
524
A
ASN
525
n
31
ASN
525
A
VAL
526
n
32
VAL
526
A
PHE
527
n
33
PHE
527
A
SER
528
n
34
SER
528
A
HIS
529
n
35
HIS
529
A
GLN
530
n
36
GLN
530
A
LEU
531
n
37
LEU
531
A
PRO
532
n
38
PRO
532
A
ARG
533
n
39
ARG
533
A
MET
534
n
40
MET
534
A
PRO
535
n
41
PRO
535
A
LYS
536
n
42
LYS
536
A
GLU
537
n
43
GLU
537
A
TYR
538
n
44
TYR
538
A
ILE
539
n
45
ILE
539
A
ALA
540
n
46
ALA
540
A
ARG
541
n
47
ARG
541
A
LEU
542
n
48
LEU
542
A
VAL
543
n
49
VAL
543
A
PHE
544
n
50
PHE
544
A
ASP
545
n
51
ASP
545
A
PRO
546
n
52
PRO
546
A
LYS
547
n
53
LYS
547
A
HIS
548
n
54
HIS
548
A
LYS
549
n
55
LYS
549
A
THR
550
n
56
THR
550
A
LEU
551
n
57
LEU
551
A
ALA
552
n
58
ALA
552
A
LEU
553
n
59
LEU
553
A
ILE
554
n
60
ILE
554
A
LYS
555
n
61
LYS
555
A
ASP
556
n
62
ASP
556
A
GLY
557
n
63
GLY
557
A
ARG
558
n
64
ARG
558
A
VAL
559
n
65
VAL
559
A
ILE
560
n
66
ILE
560
A
GLY
561
n
67
GLY
561
A
GLY
562
n
68
GLY
562
A
ILE
563
n
69
ILE
563
A
CYS
564
n
70
CYS
564
A
PHE
565
n
71
PHE
565
A
ARG
566
n
72
ARG
566
A
MET
567
n
73
MET
567
A
PHE
568
n
74
PHE
568
A
PRO
569
n
75
PRO
569
A
THR
570
n
76
THR
570
A
GLN
571
n
77
GLN
571
A
GLY
572
n
78
GLY
572
A
PHE
573
n
79
PHE
573
A
THR
574
n
80
THR
574
A
GLU
575
n
81
GLU
575
A
ILE
576
n
82
ILE
576
A
VAL
577
n
83
VAL
577
A
PHE
578
n
84
PHE
578
A
CYS
579
n
85
CYS
579
A
ALA
580
n
86
ALA
580
A
VAL
581
n
87
VAL
581
A
THR
582
n
88
THR
582
A
SER
583
n
89
SER
583
A
ASN
584
n
90
ASN
584
A
GLU
585
n
91
GLU
585
A
GLN
586
n
92
GLN
586
A
VAL
587
n
93
VAL
587
A
LYS
588
n
94
LYS
588
A
GLY
589
n
95
GLY
589
A
TYR
590
n
96
TYR
590
A
GLY
591
n
97
GLY
591
A
THR
592
n
98
THR
592
A
HIS
593
n
99
HIS
593
A
LEU
594
n
100
LEU
594
A
MET
595
n
101
MET
595
A
ASN
596
n
102
ASN
596
A
HIS
597
n
103
HIS
597
A
LEU
598
n
104
LEU
598
A
LYS
599
n
105
LYS
599
A
GLU
600
n
106
GLU
600
A
TYR
601
n
107
TYR
601
A
HIS
602
n
108
HIS
602
A
ILE
603
n
109
ILE
603
A
LYS
604
n
110
LYS
604
A
HIS
605
n
111
HIS
605
A
ASN
606
n
112
ASN
606
A
ILE
607
n
113
ILE
607
A
LEU
608
n
114
LEU
608
A
TYR
609
n
115
TYR
609
A
PHE
610
n
116
PHE
610
A
LEU
611
n
117
LEU
611
A
THR
612
n
118
THR
612
A
TYR
613
n
119
TYR
613
A
ALA
614
n
120
ALA
614
A
ASP
615
n
121
ASP
615
A
GLU
616
n
122
GLU
616
A
TYR
617
n
123
TYR
617
A
ALA
618
n
124
ALA
618
A
ILE
619
n
125
ILE
619
A
GLY
620
n
126
GLY
620
A
TYR
621
n
127
TYR
621
A
PHE
622
n
128
PHE
622
A
LYS
623
n
129
LYS
623
A
LYS
624
n
130
LYS
624
A
GLN
625
n
131
GLN
625
A
GLY
626
n
132
GLY
626
A
PHE
627
n
133
PHE
627
A
SER
628
n
134
SER
628
A
LYS
629
n
135
LYS
629
A
ASP
630
n
136
ASP
630
A
ILE
631
n
137
ILE
631
A
LYS
632
n
138
LYS
632
A
VAL
633
n
139
VAL
633
A
PRO
634
n
140
PRO
634
A
LYS
635
n
141
LYS
635
A
SER
636
n
142
SER
636
A
ARG
637
n
143
ARG
637
A
TYR
638
n
144
TYR
638
A
LEU
639
n
145
LEU
639
A
GLY
640
n
146
GLY
640
A
TYR
641
n
147
TYR
641
A
ILE
642
n
148
ILE
642
A
LYS
643
n
149
LYS
643
A
ASP
644
n
150
ASP
644
A
TYR
645
n
151
TYR
645
A
GLU
646
n
152
GLU
646
A
GLY
647
n
153
GLY
647
A
ALA
648
n
154
ALA
648
A
THR
649
n
155
THR
649
A
LEU
650
n
156
LEU
650
A
MET
651
n
157
MET
651
A
GLU
652
n
158
GLU
652
A
CYS
653
n
159
CYS
653
A
GLU
654
n
160
GLU
654
A
LEU
655
n
161
LEU
655
A
ASN
656
n
162
ASN
656
A
PRO
657
n
163
PRO
657
A
ARG
658
n
164
ARG
658
A
n
165
659
A
n
166
660
A
n
167
661
A
n
168
662
A
author_and_software_defined_assembly
PISA
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
HIS
502
A
N
HIS
8
A
O
ALA
552
A
O
ALA
58
A
N
LYS
549
A
N
LYS
55
A
O
PHE
565
A
O
PHE
71
A
N
ARG
566
A
N
ARG
72
A
O
GLU
575
A
O
GLU
81
A
N
ILE
576
A
N
ILE
82
A
O
LEU
611
A
O
LEU
117
A
N
THR
612
A
N
THR
118
A
O
MET
651
A
O
MET
157
A
O
GLU
652
A
O
GLU
158
A
N
SER
628
A
N
SER
134
1
A
GLY
495
A
GLY
1
1
Y
1
A
ILE
659
A
ILE
165
1
Y
1
A
PRO
660
A
PRO
166
1
Y
1
A
TYR
661
A
TYR
167
1
Y
1
A
THR
662
A
THR
168
1
Y
1
A
LEU
508
-157.64
-58.31
PROTEIN_REP.PARAM
PROTEIN.TOP
WATER_REP.PARAM
WATER_REP.TOP
COA_XPLOR_PAR.TXT
COA_XPLOR_TOP.TXT
22.9
3.09
2.58
0.00
3.09
0.00
-6.19
0.24
0.010
0.197
0.197
0.197
1.74
32.98
592
14729
4.0
94.3
RANDOM
762661.16
0.000000
1
RESTRAINED
THROUGHOUT
0.0
0
MOLECULAR REPLACEMENT
1YGH
FLAT MODEL
47.6544
0.3745
0.26
0.20
5.00
0.17
0.13
1.74
32.98
131
1512
51
0
1330
0.005
1.2
22.9
0.87
1.25
1.50
1.92
2.00
2.16
2.00
3.04
2.50
0.297
0.032
0.275
1.85
86
1750
6
4.7
71.6
20.9
1.68
32.98
1Z4R
15315
0
-3
0.056
0.056
1
19.7
6.71
87.2
0.169
1.68
1.74
3.3
1792
0.169
1.73
87.2
refinement
CNS
1.1
data reduction
CrystalClear
(MSC/RIGAKU)
data scaling
d*TREK
phasing
PHASER
Human GCN5 Acetyltransferase
1
N
N
2
N
N
3
N
N
A
ASN
513
A
ASN
19
HELX_P
A
LEU
531
A
LEU
37
1
1
19
A
PRO
535
A
PRO
41
HELX_P
A
PHE
544
A
PHE
50
1
2
10
A
SER
583
A
SER
89
HELX_P
A
GLN
586
A
GLN
92
5
3
4
A
GLY
589
A
GLY
95
HELX_P
A
HIS
605
A
HIS
111
1
4
17
A
ASP
615
A
ASP
121
HELX_P
A
TYR
617
A
TYR
123
5
5
3
A
ALA
618
A
ALA
124
HELX_P
A
GLN
625
A
GLN
131
1
6
8
A
PRO
634
A
PRO
140
HELX_P
A
LEU
639
A
LEU
145
1
7
6
TRANSFERASE
GCN5, Acetyltransferase, SGC, Structural Genomics, Structural Genomics Consortium, TRANSFERASE
GCNL2_HUMAN
UNP
1
497
Q92830
GIIEFHVIGNSLTPKANRRVLLWLVGLQNVFSHQLPRMPKEYIARLVFDPKHKTLALIKDGRVIGGICFRMFPTQGFTEI
VFCAVTSNEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFKKQGFSKDIKVPKSRYLGYIKDYEGATLMECELN
PRIPYT
497
662
1Z4R
497
662
Q92830
A
1
3
168
1
cloning artifact
GLY
495
1Z4R
A
Q92830
UNP
1
1
cloning artifact
SER
496
1Z4R
A
Q92830
UNP
2
7
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
A
ILE
499
A
ILE
5
A
ILE
504
A
ILE
10
A
LYS
549
A
LYS
55
A
LYS
555
A
LYS
61
A
ARG
558
A
ARG
64
A
PHE
568
A
PHE
74
A
PHE
573
A
PHE
79
A
VAL
581
A
VAL
87
A
TYR
609
A
TYR
115
A
ALA
614
A
ALA
120
A
THR
649
A
THR
155
A
GLU
654
A
GLU
160
A
PHE
627
A
PHE
133
A
SER
628
A
SER
134
BINDING SITE FOR RESIDUE ACO A 401
A
ACO
401
Software
34
A
HIS
502
A
HIS
8
34
5_554
A
ALA
512
A
ALA
18
34
5_554
A
ASN
513
A
ASN
19
34
5_554
A
ARG
515
A
ARG
21
34
5_554
A
TRP
519
A
TRP
25
34
5_554
A
GLN
530
A
GLN
36
34
1_555
A
LEU
531
A
LEU
37
34
1_555
A
ILE
576
A
ILE
82
34
1_555
A
VAL
577
A
VAL
83
34
1_555
A
PHE
578
A
PHE
84
34
1_555
A
CYS
579
A
CYS
85
34
1_555
A
ALA
580
A
ALA
86
34
1_555
A
VAL
581
A
VAL
87
34
1_555
A
GLN
586
A
GLN
92
34
1_555
A
VAL
587
A
VAL
93
34
1_555
A
LYS
588
A
LYS
94
34
1_555
A
GLY
589
A
GLY
95
34
1_555
A
TYR
590
A
TYR
96
34
1_555
A
GLY
591
A
GLY
97
34
1_555
A
THR
592
A
THR
98
34
1_555
A
THR
612
A
THR
118
34
1_555
A
TYR
613
A
TYR
119
34
1_555
A
ASP
615
A
ASP
121
34
1_555
A
TYR
617
A
TYR
123
34
1_555
A
GLY
620
A
GLY
126
34
1_555
A
TYR
621
A
TYR
127
34
1_555
A
LYS
624
A
LYS
130
34
1_555
A
HOH
1002
C
HOH
34
1_555
A
HOH
1008
C
HOH
34
5_554
A
HOH
1013
C
HOH
34
1_555
A
HOH
1024
C
HOH
34
1_555
A
HOH
1033
C
HOH
34
1_555
A
HOH
1036
C
HOH
34
1_555
A
HOH
1044
C
HOH
34
1_555
169
P 61