0.006655 0.000000 0.000000 0.000000 0.006655 0.000000 0.000000 0.000000 0.006655 0.00000 0.00000 0.00000 Gatzeva-Topalova, P.Z. May, A.P. Sousa, M.C. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 24 90.00 90.00 90.00 150.253 150.253 150.253 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N S N 305 N O N 306 N O N 307 N O N 308 N O N 309 N N N 310 S C N 311 N C N 312 N O N 313 R C N 314 N O N 315 N C N 316 N O N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N N N 327 S C N 328 N C N 329 N O N 330 N C Y 331 N C Y 332 N C Y 333 N C Y 334 N N Y 335 N C Y 336 N C Y 337 N C Y 338 N C Y 339 N C N 340 N O N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N N N 354 S C N 355 N C N 356 N O N 357 N C Y 358 N C Y 359 N C Y 360 N C Y 361 N C Y 362 N C Y 363 N C N 364 N O N 365 N O N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N N N 378 S C N 379 N C N 380 N O N 381 N C N 382 N C N 383 N C N 384 N O N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N doub N 291 N doub N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N doub N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N doub N 317 N sing N 318 N sing N 319 N sing N 320 N sing Y 321 N doub Y 322 N sing Y 323 N sing N 324 N sing Y 325 N doub Y 326 N sing Y 327 N sing N 328 N sing Y 329 N sing Y 330 N doub N 331 N sing Y 332 N doub N 333 N sing Y 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N doub N 345 N sing N 346 N sing N 347 N sing N 348 N sing Y 349 N doub Y 350 N sing Y 351 N sing N 352 N sing Y 353 N doub N 354 N sing Y 355 N doub N 356 N sing Y 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N doub N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing UK Structure STRUE6 2005 0969-2126 13 929 942 10.1016/j.str.2005.03.018 15939024 Structure and Mechanism of ArnA: Conformational Change Implies Ordered Dehydrogenase Mechanism in Key Enzyme for Polymyxin Resistance 2005 10.2210/pdb1z7b/pdb pdb_00001z7b 100 1 CCD 2003-12-17 ADSC QUANTUM 315 Double crystal, Si(111) SINGLE WAVELENGTH M x-ray 1 1.0781 1.0 8.2.2 ALS 1.0781 SYNCHROTRON ALS BEAMLINE 8.2.2 41456.113 protein ArnA dehydrogenase domain R619E 1 man polymer 96.063 SULFATE ION 1 syn non-polymer 18.015 water 83 nat water Hypothetical protein yfbG no no HGMSQPACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKK CDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWI YSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRD GIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHEKPS IRNAHRCLDWEPKIDMQETIDETLDFFLRTVDLTDKPS HGMSQPACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKK CDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWI YSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRD GIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHEKPS IRNAHRCLDWEPKIDMQETIDETLDFFLRTVDLTDKPS A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Escherichia Escherichia sample plasmid is AN ENGINEERED VARIANT OF THE PET28 PMRI, YFBG 562 Escherichia coli 562 Escherichia coli ROSETTA (DE3) plasmid PMS122 1 3.7 67 VAPOR DIFFUSION, HANGING DROP 6.75 2.0 M (NH4)2SO4, 5 MM DTT, 100 MM MES PH 6.75, VAPOR DIFFUSION, HANGING DROP, temperature 289K 289 database_2 struct_ref_seq_dif struct_site chem_comp_atom chem_comp_bond pdbx_initial_refinement_model repository Initial release Version format compliance Version format compliance Database references Derived calculations Data collection Refinement description 1 0 2005-06-07 1 1 2008-04-30 1 2 2011-07-13 1 3 2021-10-20 1 4 2023-08-23 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id N RCSB Y RCSB 2005-03-24 REL REL SO4 SULFATE ION HOH water 1U9J PDB experimental model SO4 301 2 SO4 SO4 301 A HOH 1 3 HOH HOH 1 A HOH 2 3 HOH HOH 2 A HOH 3 3 HOH HOH 3 A HOH 4 3 HOH HOH 4 A HOH 5 3 HOH HOH 5 A HOH 6 3 HOH HOH 6 A HOH 7 3 HOH HOH 7 A HOH 8 3 HOH HOH 8 A HOH 9 3 HOH HOH 9 A HOH 10 3 HOH HOH 10 A HOH 11 3 HOH HOH 11 A HOH 12 3 HOH HOH 12 A HOH 13 3 HOH HOH 13 A HOH 14 3 HOH HOH 14 A HOH 15 3 HOH HOH 15 A HOH 16 3 HOH HOH 16 A HOH 17 3 HOH HOH 17 A HOH 18 3 HOH HOH 18 A HOH 19 3 HOH HOH 19 A HOH 20 3 HOH HOH 20 A HOH 21 3 HOH HOH 21 A HOH 22 3 HOH HOH 22 A HOH 23 3 HOH HOH 23 A HOH 24 3 HOH HOH 24 A HOH 25 3 HOH HOH 25 A HOH 26 3 HOH HOH 26 A HOH 27 3 HOH HOH 27 A HOH 28 3 HOH HOH 28 A HOH 29 3 HOH HOH 29 A HOH 30 3 HOH HOH 30 A HOH 31 3 HOH HOH 31 A HOH 32 3 HOH HOH 32 A HOH 33 3 HOH HOH 33 A HOH 34 3 HOH HOH 34 A HOH 35 3 HOH HOH 35 A HOH 36 3 HOH HOH 36 A HOH 37 3 HOH HOH 37 A HOH 38 3 HOH HOH 38 A HOH 40 3 HOH HOH 40 A HOH 41 3 HOH HOH 41 A HOH 42 3 HOH HOH 42 A HOH 43 3 HOH HOH 43 A HOH 44 3 HOH HOH 44 A HOH 45 3 HOH HOH 45 A HOH 46 3 HOH HOH 46 A HOH 48 3 HOH HOH 48 A HOH 49 3 HOH HOH 49 A HOH 50 3 HOH HOH 50 A HOH 54 3 HOH HOH 54 A HOH 55 3 HOH HOH 55 A HOH 56 3 HOH HOH 56 A HOH 57 3 HOH HOH 57 A HOH 58 3 HOH HOH 58 A HOH 59 3 HOH HOH 59 A HOH 61 3 HOH HOH 61 A HOH 62 3 HOH HOH 62 A HOH 65 3 HOH HOH 65 A HOH 67 3 HOH HOH 67 A HOH 70 3 HOH HOH 70 A HOH 73 3 HOH HOH 73 A HOH 74 3 HOH HOH 74 A HOH 75 3 HOH HOH 75 A HOH 76 3 HOH HOH 76 A HOH 77 3 HOH HOH 77 A HOH 78 3 HOH HOH 78 A HOH 79 3 HOH HOH 79 A HOH 80 3 HOH HOH 80 A HOH 81 3 HOH HOH 81 A HOH 82 3 HOH HOH 82 A HOH 83 3 HOH HOH 83 A HOH 84 3 HOH HOH 84 A HOH 85 3 HOH HOH 85 A HOH 86 3 HOH HOH 86 A HOH 87 3 HOH HOH 87 A HOH 88 3 HOH HOH 88 A HOH 89 3 HOH HOH 89 A HOH 90 3 HOH HOH 90 A HOH 92 3 HOH HOH 92 A HOH 93 3 HOH HOH 93 A HOH 94 3 HOH HOH 94 A HOH 95 3 HOH HOH 95 A HOH 96 3 HOH HOH 96 A HOH 97 3 HOH HOH 97 A n 1 303 A n 2 304 A n 3 305 A n 4 306 A n 5 307 A n 6 308 A n 7 309 A n 8 310 A n 9 311 A n 10 312 A n 11 313 A n 12 314 A ARG 315 n 13 ARG 315 A THR 316 n 14 THR 316 A ARG 317 n 15 ARG 317 A VAL 318 n 16 VAL 318 A LEU 319 n 17 LEU 319 A ILE 320 n 18 ILE 320 A LEU 321 n 19 LEU 321 A GLY 322 n 20 GLY 322 A VAL 323 n 21 VAL 323 A ASN 324 n 22 ASN 324 A GLY 325 n 23 GLY 325 A PHE 326 n 24 PHE 326 A ILE 327 n 25 ILE 327 A GLY 328 n 26 GLY 328 A ASN 329 n 27 ASN 329 A HIS 330 n 28 HIS 330 A LEU 331 n 29 LEU 331 A THR 332 n 30 THR 332 A GLU 333 n 31 GLU 333 A ARG 334 n 32 ARG 334 A LEU 335 n 33 LEU 335 A LEU 336 n 34 LEU 336 A ALA 337 n 35 ARG 337 A GLU 338 n 36 GLU 338 A ALA 339 n 37 ASP 339 A HIS 340 n 38 HIS 340 A TYR 341 n 39 TYR 341 A GLU 342 n 40 GLU 342 A VAL 343 n 41 VAL 343 A TYR 344 n 42 TYR 344 A GLY 345 n 43 GLY 345 A LEU 346 n 44 LEU 346 A ASP 347 n 45 ASP 347 A ILE 348 n 46 ILE 348 A GLY 349 n 47 GLY 349 A SER 350 n 48 SER 350 A ALA 351 n 49 ASP 351 A ALA 352 n 50 ALA 352 A ILE 353 n 51 ILE 353 A SER 354 n 52 SER 354 A ALA 355 n 53 ARG 355 A PHE 356 n 54 PHE 356 A LEU 357 n 55 LEU 357 A ASN 358 n 56 ASN 358 A HIS 359 n 57 HIS 359 A PRO 360 n 58 PRO 360 A HIS 361 n 59 HIS 361 A PHE 362 n 60 PHE 362 A HIS 363 n 61 HIS 363 A PHE 364 n 62 PHE 364 A VAL 365 n 63 VAL 365 A GLU 366 n 64 GLU 366 A GLY 367 n 65 GLY 367 A ASP 368 n 66 ASP 368 A ILE 369 n 67 ILE 369 A SER 370 n 68 SER 370 A ILE 371 n 69 ILE 371 A HIS 372 n 70 HIS 372 A SER 373 n 71 SER 373 A GLU 374 n 72 GLU 374 A TRP 375 n 73 TRP 375 A ILE 376 n 74 ILE 376 A GLU 377 n 75 GLU 377 A TYR 378 n 76 TYR 378 A HIS 379 n 77 HIS 379 A VAL 380 n 78 VAL 380 A LYS 381 n 79 LYS 381 A LYS 382 n 80 LYS 382 A CYS 383 n 81 CYS 383 A ASP 384 n 82 ASP 384 A VAL 385 n 83 VAL 385 A VAL 386 n 84 VAL 386 A LEU 387 n 85 LEU 387 A PRO 388 n 86 PRO 388 A LEU 389 n 87 LEU 389 A VAL 390 n 88 VAL 390 A ALA 391 n 89 ALA 391 A ILE 392 n 90 ILE 392 A ALA 393 n 91 ALA 393 A THR 394 n 92 THR 394 A PRO 395 n 93 PRO 395 A ILE 396 n 94 ILE 396 A GLU 397 n 95 GLU 397 A TYR 398 n 96 TYR 398 A THR 399 n 97 THR 399 A ALA 400 n 98 ARG 400 A ASN 401 n 99 ASN 401 A PRO 402 n 100 PRO 402 A LEU 403 n 101 LEU 403 A ALA 404 n 102 ARG 404 A VAL 405 n 103 VAL 405 A PHE 406 n 104 PHE 406 A GLU 407 n 105 GLU 407 A LEU 408 n 106 LEU 408 A ASP 409 n 107 ASP 409 A PHE 410 n 108 PHE 410 A GLU 411 n 109 GLU 411 A GLU 412 n 110 GLU 412 A ASN 413 n 111 ASN 413 A LEU 414 n 112 LEU 414 A ARG 415 n 113 ARG 415 A ILE 416 n 114 ILE 416 A ILE 417 n 115 ILE 417 A ARG 418 n 116 ARG 418 A TYR 419 n 117 TYR 419 A CYS 420 n 118 CYS 420 A VAL 421 n 119 VAL 421 A LYS 422 n 120 LYS 422 A TYR 423 n 121 TYR 423 A ARG 424 n 122 ARG 424 A LYS 425 n 123 LYS 425 A ARG 426 n 124 ARG 426 A ILE 427 n 125 ILE 427 A ILE 428 n 126 ILE 428 A PHE 429 n 127 PHE 429 A PRO 430 n 128 PRO 430 A SER 431 n 129 SER 431 A THR 432 n 130 THR 432 A SER 433 n 131 SER 433 A GLU 434 n 132 GLU 434 A VAL 435 n 133 VAL 435 A TYR 436 n 134 TYR 436 A GLY 437 n 135 GLY 437 A MET 438 n 136 MET 438 A CYS 439 n 137 CYS 439 A SER 440 n 138 SER 440 A ASP 441 n 139 ASP 441 A ALA 442 n 140 LYS 442 A TYR 443 n 141 TYR 443 A PHE 444 n 142 PHE 444 A ASP 445 n 143 ASP 445 A GLU 446 n 144 GLU 446 A ASP 447 n 145 ASP 447 A HIS 448 n 146 HIS 448 A SER 449 n 147 SER 449 A ASN 450 n 148 ASN 450 A LEU 451 n 149 LEU 451 A ILE 452 n 150 ILE 452 A VAL 453 n 151 VAL 453 A GLY 454 n 152 GLY 454 A PRO 455 n 153 PRO 455 A VAL 456 n 154 VAL 456 A ASN 457 n 155 ASN 457 A LYS 458 n 156 LYS 458 A PRO 459 n 157 PRO 459 A ARG 460 n 158 ARG 460 A TRP 461 n 159 TRP 461 A ILE 462 n 160 ILE 462 A TYR 463 n 161 TYR 463 A SER 464 n 162 SER 464 A VAL 465 n 163 VAL 465 A SER 466 n 164 SER 466 A LYS 467 n 165 LYS 467 A GLN 468 n 166 GLN 468 A LEU 469 n 167 LEU 469 A LEU 470 n 168 LEU 470 A ASP 471 n 169 ASP 471 A ARG 472 n 170 ARG 472 A VAL 473 n 171 VAL 473 A ILE 474 n 172 ILE 474 A TRP 475 n 173 TRP 475 A ALA 476 n 174 ALA 476 A TYR 477 n 175 TYR 477 A GLY 478 n 176 GLY 478 A GLU 479 n 177 GLU 479 A LYS 480 n 178 LYS 480 A GLU 481 n 179 GLU 481 A GLY 482 n 180 GLY 482 A LEU 483 n 181 LEU 483 A GLN 484 n 182 GLN 484 A PHE 485 n 183 PHE 485 A THR 486 n 184 THR 486 A LEU 487 n 185 LEU 487 A PHE 488 n 186 PHE 488 A ARG 489 n 187 ARG 489 A PRO 490 n 188 PRO 490 A PHE 491 n 189 PHE 491 A ASN 492 n 190 ASN 492 A TRP 493 n 191 TRP 493 A MET 494 n 192 MET 494 A GLY 495 n 193 GLY 495 A PRO 496 n 194 PRO 496 A ARG 497 n 195 ARG 497 A LEU 498 n 196 LEU 498 A ASP 499 n 197 ASP 499 A ASN 500 n 198 ASN 500 A LEU 501 n 199 LEU 501 A ASN 502 n 200 ASN 502 A ALA 503 n 201 ALA 503 A ALA 504 n 202 ALA 504 A ARG 505 n 203 ARG 505 A ILE 506 n 204 ILE 506 A GLY 507 n 205 GLY 507 A SER 508 n 206 SER 508 A SER 509 n 207 SER 509 A ARG 510 n 208 ARG 510 A ALA 511 n 209 ALA 511 A ILE 512 n 210 ILE 512 A THR 513 n 211 THR 513 A GLN 514 n 212 GLN 514 A LEU 515 n 213 LEU 515 A ILE 516 n 214 ILE 516 A LEU 517 n 215 LEU 517 A ASN 518 n 216 ASN 518 A LEU 519 n 217 LEU 519 A VAL 520 n 218 VAL 520 A GLU 521 n 219 GLU 521 A GLY 522 n 220 GLY 522 A SER 523 n 221 SER 523 A PRO 524 n 222 PRO 524 A ILE 525 n 223 ILE 525 A LYS 526 n 224 LYS 526 A LEU 527 n 225 LEU 527 A ILE 528 n 226 ILE 528 A ASP 529 n 227 ASP 529 A GLY 530 n 228 GLY 530 A GLY 531 n 229 GLY 531 A ALA 532 n 230 LYS 532 A GLN 533 n 231 GLN 533 A LYS 534 n 232 LYS 534 A ARG 535 n 233 ARG 535 A CYS 536 n 234 CYS 536 A PHE 537 n 235 PHE 537 A THR 538 n 236 THR 538 A ASP 539 n 237 ASP 539 A ILE 540 n 238 ILE 540 A ARG 541 n 239 ARG 541 A ASP 542 n 240 ASP 542 A GLY 543 n 241 GLY 543 A ILE 544 n 242 ILE 544 A GLU 545 n 243 GLU 545 A ALA 546 n 244 ALA 546 A LEU 547 n 245 LEU 547 A TYR 548 n 246 TYR 548 A ARG 549 n 247 ARG 549 A ILE 550 n 248 ILE 550 A ILE 551 n 249 ILE 551 A GLU 552 n 250 GLU 552 A ASN 553 n 251 ASN 553 A ALA 554 n 252 ALA 554 A GLY 555 n 253 GLY 555 A ASN 556 n 254 ASN 556 A ARG 557 n 255 ARG 557 A CYS 558 n 256 CYS 558 A ASP 559 n 257 ASP 559 A GLY 560 n 258 GLY 560 A GLU 561 n 259 GLU 561 A ILE 562 n 260 ILE 562 A ILE 563 n 261 ILE 563 A ASN 564 n 262 ASN 564 A ILE 565 n 263 ILE 565 A GLY 566 n 264 GLY 566 A ASN 567 n 265 ASN 567 A PRO 568 n 266 PRO 568 A GLU 569 n 267 GLU 569 A ASN 570 n 268 ASN 570 A GLU 571 n 269 GLU 571 A ALA 572 n 270 ALA 572 A SER 573 n 271 SER 573 A ILE 574 n 272 ILE 574 A GLU 575 n 273 GLU 575 A GLU 576 n 274 GLU 576 A LEU 577 n 275 LEU 577 A GLY 578 n 276 GLY 578 A GLU 579 n 277 GLU 579 A MET 580 n 278 MET 580 A LEU 581 n 279 LEU 581 A LEU 582 n 280 LEU 582 A ALA 583 n 281 ALA 583 A SER 584 n 282 SER 584 A PHE 585 n 283 PHE 585 A GLU 586 n 284 GLU 586 A ALA 587 n 285 LYS 587 A HIS 588 n 286 HIS 588 A PRO 589 n 287 PRO 589 A LEU 590 n 288 LEU 590 A ARG 591 n 289 ARG 591 A HIS 592 n 290 HIS 592 A HIS 593 n 291 HIS 593 A PHE 594 n 292 PHE 594 A PRO 595 n 293 PRO 595 A PRO 596 n 294 PRO 596 A PHE 597 n 295 PHE 597 A ALA 598 n 296 ALA 598 A GLY 599 n 297 GLY 599 A PHE 600 n 298 PHE 600 A ALA 601 n 299 ARG 601 A VAL 602 n 300 VAL 602 A ALA 603 n 301 VAL 603 A ALA 604 n 302 GLU 604 A SER 605 n 303 SER 605 A n 304 606 A n 305 607 A n 306 608 A n 307 609 A n 308 610 A n 309 611 A n 310 612 A n 311 613 A GLN 614 n 312 GLN 614 A ASP 615 n 313 ASP 615 A VAL 616 n 314 VAL 616 A ALA 617 n 315 GLU 617 A HIS 618 n 316 HIS 618 A GLU 619 n 317 GLU 619 A LYS 620 n 318 LYS 620 A PRO 621 n 319 PRO 621 A SER 622 n 320 SER 622 A ILE 623 n 321 ILE 623 A ARG 624 n 322 ARG 624 A ASN 625 n 323 ASN 625 A ALA 626 n 324 ALA 626 A HIS 627 n 325 HIS 627 A ARG 628 n 326 ARG 628 A CYS 629 n 327 CYS 629 A LEU 630 n 328 LEU 630 A ASP 631 n 329 ASP 631 A TRP 632 n 330 TRP 632 A GLU 633 n 331 GLU 633 A PRO 634 n 332 PRO 634 A LYS 635 n 333 LYS 635 A ILE 636 n 334 ILE 636 A ALA 637 n 335 ASP 637 A MET 638 n 336 MET 638 A GLN 639 n 337 GLN 639 A GLU 640 n 338 GLU 640 A THR 641 n 339 THR 641 A ILE 642 n 340 ILE 642 A ASP 643 n 341 ASP 643 A GLU 644 n 342 GLU 644 A THR 645 n 343 THR 645 A LEU 646 n 344 LEU 646 A ASP 647 n 345 ASP 647 A PHE 648 n 346 PHE 648 A PHE 649 n 347 PHE 649 A LEU 650 n 348 LEU 650 A ARG 651 n 349 ARG 651 A THR 652 n 350 THR 652 A VAL 653 n 351 VAL 653 A ALA 654 n 352 ASP 654 A LEU 655 n 353 LEU 655 A THR 656 n 354 THR 656 A n 355 657 A n 356 658 A n 357 659 A n 358 660 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O VAL 365 A O VAL 63 A N GLY 345 A N GLY 43 A O TYR 344 A O TYR 42 A N ILE 320 A N ILE 18 A N LEU 319 A N LEU 17 A O VAL 385 A O VAL 83 A N VAL 386 A N VAL 84 A O ILE 428 A O ILE 126 A N PHE 429 A N PHE 127 A O THR 486 A O THR 184 A N ARG 489 A N ARG 187 A O ILE 565 A O ILE 263 A N MET 494 A N MET 192 A O THR 538 A O THR 236 A N LEU 527 A N LEU 225 A O ARG 601 A O ARG 299 A N ARG 535 A N ARG 233 A O ALA 572 A O ALA 270 1 A CG ARG 337 A CG ARG 35 1 Y 1 A CD ARG 337 A CD ARG 35 1 Y 1 A NE ARG 337 A NE ARG 35 1 Y 1 A CZ ARG 337 A CZ ARG 35 1 Y 1 A NH1 ARG 337 A NH1 ARG 35 1 Y 1 A NH2 ARG 337 A NH2 ARG 35 1 Y 1 A CG ASP 339 A CG ASP 37 1 Y 1 A OD1 ASP 339 A OD1 ASP 37 1 Y 1 A OD2 ASP 339 A OD2 ASP 37 1 Y 1 A CG ASP 351 A CG ASP 49 1 Y 1 A OD1 ASP 351 A OD1 ASP 49 1 Y 1 A OD2 ASP 351 A OD2 ASP 49 1 Y 1 A CG ARG 355 A CG ARG 53 1 Y 1 A CD ARG 355 A CD ARG 53 1 Y 1 A NE ARG 355 A NE ARG 53 1 Y 1 A CZ ARG 355 A CZ ARG 53 1 Y 1 A NH1 ARG 355 A NH1 ARG 53 1 Y 1 A NH2 ARG 355 A NH2 ARG 53 1 Y 1 A CG ARG 400 A CG ARG 98 1 Y 1 A CD ARG 400 A CD ARG 98 1 Y 1 A NE ARG 400 A NE ARG 98 1 Y 1 A CZ ARG 400 A CZ ARG 98 1 Y 1 A NH1 ARG 400 A NH1 ARG 98 1 Y 1 A NH2 ARG 400 A NH2 ARG 98 1 Y 1 A CG ARG 404 A CG ARG 102 1 Y 1 A CD ARG 404 A CD ARG 102 1 Y 1 A NE ARG 404 A NE ARG 102 1 Y 1 A CZ ARG 404 A CZ ARG 102 1 Y 1 A NH1 ARG 404 A NH1 ARG 102 1 Y 1 A NH2 ARG 404 A NH2 ARG 102 1 Y 1 A CG LYS 442 A CG LYS 140 1 Y 1 A CD LYS 442 A CD LYS 140 1 Y 1 A CE LYS 442 A CE LYS 140 1 Y 1 A NZ LYS 442 A NZ LYS 140 1 Y 1 A CG LYS 532 A CG LYS 230 1 Y 1 A CD LYS 532 A CD LYS 230 1 Y 1 A CE LYS 532 A CE LYS 230 1 Y 1 A NZ LYS 532 A NZ LYS 230 1 Y 1 A CG LYS 587 A CG LYS 285 1 Y 1 A CD LYS 587 A CD LYS 285 1 Y 1 A CE LYS 587 A CE LYS 285 1 Y 1 A NZ LYS 587 A NZ LYS 285 1 Y 1 A CG ARG 601 A CG ARG 299 1 Y 1 A CD ARG 601 A CD ARG 299 1 Y 1 A NE ARG 601 A NE ARG 299 1 Y 1 A CZ ARG 601 A CZ ARG 299 1 Y 1 A NH1 ARG 601 A NH1 ARG 299 1 Y 1 A NH2 ARG 601 A NH2 ARG 299 1 Y 1 A CG1 VAL 603 A CG1 VAL 301 1 Y 1 A CG2 VAL 603 A CG2 VAL 301 1 Y 1 A CG GLU 604 A CG GLU 302 1 Y 1 A CD GLU 604 A CD GLU 302 1 Y 1 A OE1 GLU 604 A OE1 GLU 302 1 Y 1 A OE2 GLU 604 A OE2 GLU 302 1 Y 1 A CG GLU 617 A CG GLU 315 1 Y 1 A CD GLU 617 A CD GLU 315 1 Y 1 A OE1 GLU 617 A OE1 GLU 315 1 Y 1 A OE2 GLU 617 A OE2 GLU 315 1 Y 1 A CG ASP 637 A CG ASP 335 1 Y 1 A OD1 ASP 637 A OD1 ASP 335 1 Y 1 A OD2 ASP 637 A OD2 ASP 335 1 Y 1 A CG ASP 654 A CG ASP 352 1 Y 1 A OD1 ASP 654 A OD1 ASP 352 1 Y 1 A OD2 ASP 654 A OD2 ASP 352 1 Y 1 A HIS 303 A HIS 1 1 Y 1 A GLY 304 A GLY 2 1 Y 1 A MET 305 A MET 3 1 Y 1 A SER 306 A SER 4 1 Y 1 A GLN 307 A GLN 5 1 Y 1 A PRO 308 A PRO 6 1 Y 1 A ALA 309 A ALA 7 1 Y 1 A CYS 310 A CYS 8 1 Y 1 A THR 311 A THR 9 1 Y 1 A ALA 312 A ALA 10 1 Y 1 A ARG 313 A ARG 11 1 Y 1 A ARG 314 A ARG 12 1 Y 1 A SER 606 A SER 304 1 Y 1 A SER 607 A SER 305 1 Y 1 A TYR 608 A TYR 306 1 Y 1 A TYR 609 A TYR 307 1 Y 1 A GLY 610 A GLY 308 1 Y 1 A LYS 611 A LYS 309 1 Y 1 A GLY 612 A GLY 310 1 Y 1 A TYR 613 A TYR 311 1 Y 1 A ASP 657 A ASP 355 1 Y 1 A LYS 658 A LYS 356 1 Y 1 A PRO 659 A PRO 357 1 Y 1 A SER 660 A SER 358 1 Y 1 A A O O HOH HOH 89 89 1.56 1_555 13_456 1 A A O O HOH HOH 86 86 1.68 1_555 13_456 1 A SER 373 -117.96 -74.53 1 A ALA 391 -173.44 149.98 1 A PHE 410 -95.94 -66.63 1 A MET 438 -90.68 33.58 1 A GLU 619 -151.34 76.94 PROTEIN_REP.PARAM PROTEIN.TOP WATER_REP.PARAM ION.PARAM 37.2 0.00 0.00 0.00 0.00 0.00 0.00 0.224 0.005 0.2 0.2 2.31 30.0 2469 26351 25106 9.8 96.0 RANDOM 352605.00 0.000000 1 RESTRAINED THROUGHOUT 0.0 MOLECULAR REPLACEMENT 1U9J FLAT MODEL 34.5888 0.367437 0.30 0.26 5.00 0.22 0.19 2.31 30.0 85 2763 5 0 2673 0.010 1.5 23.0 0.94 1.21 1.50 1.93 2.00 2.15 2.00 3.13 2.50 0.253 0.018 0.242 2.38 198 1965 2163 10 9.2 84.1 30.2 2.30 30.0 1Z7B 26139 26090 0.0 0.0 0.094 1 21.7 6.9 99.8 0.51 2.30 2.38 5.0 2564 6.9 100.0 data reduction DENZO data scaling SCALEPACK refinement CNS phasing CNS Crystal structure of E.coli ArnA dehydrogenase (decarboxylase) domain, R619E mutant 1 N N 2 N N 3 N N A GLY 325 A GLY 23 HELX_P A GLU 338 A GLU 36 1 1 14 A SER 350 A SER 48 HELX_P A LEU 357 A LEU 55 5 2 8 A SER 373 A SER 71 HELX_P A CYS 383 A CYS 81 1 3 11 A THR 394 A THR 92 HELX_P A ASN 401 A ASN 99 1 4 8 A ASN 401 A ASN 99 HELX_P A PHE 410 A PHE 108 1 5 10 A PHE 410 A PHE 108 HELX_P A TYR 423 A TYR 121 1 6 14 A THR 432 A THR 130 HELX_P A GLY 437 A GLY 135 5 7 6 A LYS 458 A LYS 156 HELX_P A ARG 460 A ARG 158 5 8 3 A TRP 461 A TRP 159 HELX_P A GLU 481 A GLU 179 1 9 21 A SER 509 A SER 207 HELX_P A GLY 522 A GLY 220 1 10 14 A ILE 540 A ILE 238 HELX_P A ASN 553 A ASN 251 1 11 14 A ALA 554 A ALA 252 HELX_P A ARG 557 A ARG 255 5 12 4 A ILE 574 A ILE 272 HELX_P A HIS 588 A HIS 286 1 13 15 A LEU 590 A LEU 288 HELX_P A PHE 594 A PHE 292 5 14 5 A ILE 623 A ILE 321 HELX_P A ASP 631 A ASP 329 1 15 9 A ASP 637 A ASP 335 HELX_P A VAL 653 A VAL 351 1 16 17 HYDROLASE Rossmann fold, HYDROLASE ARNA_ECOLI UNP 1 306 P77398 SQPACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDV VLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSV SKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIE ALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIRN AHRCLDWEPKIDMQETIDETLDFFLRTVDLTDKPS 306 660 1Z7B 306 660 P77398 A 1 4 358 1 cloning artifact HIS 303 1Z7B A P77398 UNP 1 1 cloning artifact GLY 304 1Z7B A P77398 UNP 2 1 cloning artifact MET 305 1Z7B A P77398 UNP 3 1 ARG engineered mutation GLU 619 1Z7B A P77398 UNP 619 317 7 2 2 2 parallel parallel parallel parallel parallel parallel parallel parallel anti-parallel A PHE 362 A PHE 60 A GLU 366 A GLU 64 A TYR 341 A TYR 39 A ASP 347 A ASP 45 A THR 316 A THR 14 A LEU 321 A LEU 19 A VAL 385 A VAL 83 A PRO 388 A PRO 86 A ARG 426 A ARG 124 A PRO 430 A PRO 128 A GLN 484 A GLN 182 A PRO 490 A PRO 188 A GLU 561 A GLU 259 A ILE 565 A ILE 263 A TRP 493 A TRP 191 A MET 494 A MET 192 A THR 538 A THR 236 A ASP 539 A ASP 237 A ILE 525 A ILE 223 A ILE 528 A ILE 226 A PHE 600 A PHE 298 A VAL 603 A VAL 301 A LYS 534 A LYS 232 A CYS 536 A CYS 234 A GLU 571 A GLU 269 A SER 573 A SER 271 BINDING SITE FOR RESIDUE SO4 A 301 A SO4 301 Software 3 A HIS 448 A HIS 146 3 1_555 A PRO 595 A PRO 293 3 21_456 A ARG 624 A ARG 322 3 1_555 213 tetragonal P 41 3 2