0.009937 0.000000 0.000000 0.000000 0.009186 0.000000 0.000000 0.000000 0.024869 0.00000 0.00000 0.00000 Scheerer, P. Krauss, N. Wessner, H. Scholz, C. Otte, L. Seifert, M. Kramer, A. Schneider-Mergener, J. Hoehne, W. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 100.638 108.862 40.210 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C6 H8 O7 192.124 CITRIC ACID non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C4 H7 N O4 133.103 D-ASPARTIC ACID D-peptide linking C5 H10 N2 O3 146.144 D-GLUTAMINE D-peptide linking C6 H10 N3 O2 1 156.162 D-HISTIDINE D-peptide linking C5 H9 N O2 115.130 D-PROLINE D-peptide linking C3 H7 N O3 105.093 D-SERINE D-peptide linking C9 H11 N O3 181.189 D-TYROSINE D-peptide linking C5 H11 N O2 117.146 D-VALINE D-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N C N 75 N O N 76 N O N 77 N C N 78 N C N 79 N O N 80 N C N 81 N C N 82 N O N 83 N O N 84 N C N 85 N O N 86 N O N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N N N 96 R C N 97 N C N 98 N O N 99 N C N 100 N S N 101 N O N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N N N 110 R C N 111 N C N 112 N O N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N N N 126 R C N 127 N C N 128 N O N 129 N O N 130 N C N 131 N C N 132 N C N 133 N O N 134 N N N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N N N 146 R C N 147 N C N 148 N O N 149 N C Y 150 N C Y 151 N N Y 152 N C Y 153 N C Y 154 N N N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N N N 167 R C N 168 N C N 169 N C N 170 N C N 171 N C N 172 N O N 173 N O N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 R C N 185 N C N 186 N O N 187 N O N 188 N C N 189 N O N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N N N 198 R C N 199 N C N 200 N O N 201 N C Y 202 N C Y 203 N C Y 204 N C Y 205 N C Y 206 N C Y 207 N C N 208 N O N 209 N O N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N N N 222 R C N 223 N C N 224 N C N 225 N C N 226 N C N 227 N O N 228 N O N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N N N 241 S C N 242 N C N 243 N O N 244 N C N 245 N C N 246 N C N 247 N O N 248 N N N 249 N O N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N N N 261 S C N 262 N C N 263 N O N 264 N C N 265 N C N 266 N C N 267 N O N 268 N O N 269 N O N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N N N 280 N C N 281 N C N 282 N O N 283 N O N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N N N 290 S C N 291 N C N 292 N O N 293 N C Y 294 N C Y 295 N N Y 296 N C Y 297 N C Y 298 N N N 299 N O N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N O N 311 N H N 312 N H N 313 N N N 314 S C N 315 N C N 316 N O N 317 S C N 318 N C N 319 N C N 320 N C N 321 N O N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N N N 336 S C N 337 N C N 338 N O N 339 N C N 340 N C N 341 N C N 342 N C N 343 N O N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N H N 357 N N N 358 S C N 359 N C N 360 N O N 361 N C N 362 N C N 363 N C N 364 N C N 365 N N N 366 N O N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N N N 383 S C N 384 N C N 385 N O N 386 N C N 387 N C N 388 N S N 389 N C N 390 N O N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N N N 403 S C N 404 N C N 405 N O N 406 N C Y 407 N C Y 408 N C Y 409 N C Y 410 N C Y 411 N C Y 412 N C N 413 N O N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N N N 426 S C N 427 N C N 428 N O N 429 N C N 430 N C N 431 N C N 432 N O N 433 N H N 434 N H N 435 N H N 436 N H N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N N N 443 S C N 444 N C N 445 N O N 446 N C N 447 N O N 448 N O N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N H N 456 N N N 457 S C N 458 N C N 459 N O N 460 R C N 461 N O N 462 N C N 463 N O N 464 N H N 465 N H N 466 N H N 467 N H N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N N N 474 S C N 475 N C N 476 N O N 477 N C Y 478 N C Y 479 N C Y 480 N C Y 481 N N Y 482 N C Y 483 N C Y 484 N C Y 485 N C Y 486 N C N 487 N O N 488 N H N 489 N H N 490 N H N 491 N H N 492 N H N 493 N H N 494 N H N 495 N H N 496 N H N 497 N H N 498 N H N 499 N H N 500 N N N 501 S C N 502 N C N 503 N O N 504 N C Y 505 N C Y 506 N C Y 507 N C Y 508 N C Y 509 N C Y 510 N C N 511 N O N 512 N O N 513 N H N 514 N H N 515 N H N 516 N H N 517 N H N 518 N H N 519 N H N 520 N H N 521 N H N 522 N H N 523 N H N 524 N N N 525 S C N 526 N C N 527 N O N 528 N C N 529 N C N 530 N C N 531 N O N 532 N H N 533 N H N 534 N H N 535 N H N 536 N H N 537 N H N 538 N H N 539 N H N 540 N H N 541 N H N 542 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N doub N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N doub N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N doub N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N doub N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N doub N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N doub N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N doub N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N doub N 144 N sing N 145 N sing N 146 N sing N 147 N sing Y 148 N sing Y 149 N doub Y 150 N doub N 151 N sing Y 152 N sing N 153 N sing Y 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N doub N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N doub N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N doub N 195 N sing N 196 N sing N 197 N sing N 198 N sing Y 199 N doub Y 200 N sing Y 201 N sing N 202 N sing Y 203 N doub N 204 N sing Y 205 N doub N 206 N sing Y 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N doub N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N doub N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N doub N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N doub N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N doub N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N doub N 283 N sing N 284 N sing N 285 N sing N 286 N sing Y 287 N sing Y 288 N doub Y 289 N doub N 290 N sing Y 291 N sing N 292 N sing Y 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N doub N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N doub N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N doub N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N doub N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N doub N 391 N sing N 392 N sing N 393 N sing N 394 N sing Y 395 N doub Y 396 N sing Y 397 N sing N 398 N sing Y 399 N doub N 400 N sing Y 401 N doub N 402 N sing Y 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N doub N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N doub N 431 N sing N 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N doub N 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N doub N 460 N sing N 461 N sing N 462 N sing N 463 N sing Y 464 N doub Y 465 N sing Y 466 N sing N 467 N sing Y 468 N doub Y 469 N sing Y 470 N sing N 471 N sing Y 472 N sing Y 473 N doub N 474 N sing Y 475 N doub N 476 N sing Y 477 N sing N 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N doub N 488 N sing N 489 N sing N 490 N sing N 491 N sing Y 492 N doub Y 493 N sing Y 494 N sing N 495 N sing Y 496 N doub N 497 N sing Y 498 N doub N 499 N sing Y 500 N sing N 501 N sing N 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N doub N 512 N sing N 513 N sing N 514 N sing N 515 N sing N 516 N sing N 517 N sing N 518 N sing N 519 N sing N 520 N sing N 521 N sing N 522 N sing UK J.Mol.Recognit. 0952-3499 20 263 274 10.1002/jmr.838 17712773 Structure of an anti-cholera toxin antibody Fab in complex with an epitope-derived D-peptide: a case of polyspecific recognition. 2007 10.2210/pdb1zea/pdb pdb_00001zea 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 bent mirrors CCD 2001-10-26 MARRESEARCH Triangular monochromator SINGLE WAVELENGTH M x-ray 1 0.8095 1.0 X13 EMBL/DESY, HAMBURG 0.8095 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X13 23843.475 monoclonal anti-cholera toxin IGG1 KAPPA antibody, L chain 1 nat polymer 23410.299 monoclonal anti-cholera toxin IGG1 KAPPA antibody, H chain 1 nat polymer 990.005 short synthetic D-amino acid peptide D2 1 syn polymer 192.124 CITRIC ACID 2 syn non-polymer 18.015 water 276 nat water no no DVLMTQTPLSLPVSLGDQASISCKSSQSIVHSSGNTYFEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKI SRVEAEDLGVYYCFQGSHIPFTFGSGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR DVLMTQTPLSLPVSLGDQASISCKSSQSIVHSSGNTYFEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKI SRVEAEDLGVYYCFQGSHIPFTFGSGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR L polypeptide(L) no no QIQLVQSGPELKTPGETVRISCKASGYTFTTYGMSWVKQTPGKGFKWMGWINTYSGVPTYADDFKGRFAFSLETSASTAY LQINNLKNEDTATYFCARRSWYFDVWGTGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSG SLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSQTVTCNVAHPASSTKVDKKIVPR QIQLVQSGPELKTPGETVRISCKASGYTFTTYGMSWVKQTPGKGFKWMGWINTYSGVPTYADDFKGRFAFSLETSASTAY LQINNLKNEDTATYFCARRSWYFDVWGTGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSG SLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSQTVTCNVAHPASSTKVDKKIVPR H polypeptide(L) no yes (DVA)(DPR)G(DSN)(DGN)(DHI)(DTY)(DAS)(DSN) VPGSQHYDS A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n house mouse Mus sample Hybridoma 10090 Mus musculus BALB/c house mouse Mus sample Hybridoma 10090 Mus musculus BALB/c 1 2.33 46.74 VAPOR DIFFUSION, HANGING DROP 4.5 PEG 8000, citrat buffer, potassium chloride, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K 293 diffrn_source pdbx_entity_src_syn reflns struct_conn reflns_shell chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_site repository Initial release Version format compliance Version format compliance Data collection Derived calculations Source and taxonomy Data collection Data collection Database references Derived calculations Refinement description 1 0 2006-04-04 1 1 2008-04-30 1 2 2011-07-13 1 3 2019-08-28 1 4 2019-10-16 1 5 2023-10-25 _diffrn_source.pdbx_synchrotron_site _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.organism_scientific _reflns.pdbx_Rmerge_I_obs _struct_conn.pdbx_leaving_atom_flag _reflns_shell.Rmerge_I_obs _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id The same antibody FAB fragment TE33 in complex with its epitope peptide CTP3 RCSB Y PDBJ 2005-04-18 REL REL CIT CITRIC ACID HOH water This D-amino acid sequence occurs peptide synthesis 32630 synthetic construct sample 1TET PDB ENTRY 1TET PDB experimental model CIT 1001 4 CIT CIT 1001 L CIT 1002 4 CIT CIT 1002 L HOH 2 5 HOH HOH 1003 L HOH 7 5 HOH HOH 1004 L HOH 8 5 HOH HOH 1005 L HOH 11 5 HOH HOH 1006 L HOH 12 5 HOH HOH 1007 L HOH 13 5 HOH HOH 1008 L HOH 14 5 HOH HOH 1009 L HOH 15 5 HOH HOH 1010 L HOH 17 5 HOH HOH 1011 L HOH 19 5 HOH HOH 1012 L HOH 21 5 HOH HOH 1013 L HOH 22 5 HOH HOH 1014 L HOH 23 5 HOH HOH 1015 L HOH 26 5 HOH HOH 1016 L HOH 27 5 HOH HOH 1017 L HOH 29 5 HOH HOH 1018 L HOH 33 5 HOH HOH 1019 L HOH 34 5 HOH HOH 1020 L HOH 37 5 HOH HOH 1021 L HOH 42 5 HOH HOH 1022 L HOH 43 5 HOH HOH 1023 L HOH 45 5 HOH HOH 1024 L HOH 47 5 HOH HOH 1025 L HOH 49 5 HOH HOH 1026 L HOH 50 5 HOH HOH 1027 L HOH 52 5 HOH HOH 1028 L HOH 54 5 HOH HOH 1029 L HOH 55 5 HOH HOH 1030 L HOH 56 5 HOH HOH 1031 L HOH 59 5 HOH HOH 1032 L HOH 63 5 HOH HOH 1033 L HOH 64 5 HOH HOH 1034 L HOH 66 5 HOH HOH 1035 L HOH 69 5 HOH HOH 1036 L HOH 72 5 HOH HOH 1037 L HOH 74 5 HOH HOH 1038 L HOH 76 5 HOH HOH 1039 L HOH 77 5 HOH HOH 1040 L HOH 80 5 HOH HOH 1041 L HOH 85 5 HOH HOH 1042 L HOH 86 5 HOH HOH 1043 L HOH 88 5 HOH HOH 1044 L HOH 89 5 HOH HOH 1045 L HOH 90 5 HOH HOH 1046 L HOH 92 5 HOH HOH 1047 L HOH 93 5 HOH HOH 1048 L HOH 96 5 HOH HOH 1049 L HOH 99 5 HOH HOH 1050 L HOH 103 5 HOH HOH 1051 L HOH 107 5 HOH HOH 1052 L HOH 110 5 HOH HOH 1053 L HOH 112 5 HOH HOH 1054 L HOH 113 5 HOH HOH 1055 L HOH 114 5 HOH HOH 1056 L HOH 115 5 HOH HOH 1057 L HOH 116 5 HOH HOH 1058 L HOH 117 5 HOH HOH 1059 L HOH 118 5 HOH HOH 1060 L HOH 122 5 HOH HOH 1061 L HOH 123 5 HOH HOH 1062 L HOH 125 5 HOH HOH 1063 L HOH 129 5 HOH HOH 1064 L HOH 130 5 HOH HOH 1065 L HOH 132 5 HOH HOH 1066 L HOH 133 5 HOH HOH 1067 L HOH 139 5 HOH HOH 1068 L HOH 141 5 HOH HOH 1069 L HOH 145 5 HOH HOH 1070 L HOH 148 5 HOH HOH 1071 L HOH 149 5 HOH HOH 1072 L HOH 150 5 HOH HOH 1073 L HOH 151 5 HOH HOH 1074 L HOH 154 5 HOH HOH 1075 L HOH 155 5 HOH HOH 1076 L HOH 157 5 HOH HOH 1077 L HOH 159 5 HOH HOH 1078 L HOH 160 5 HOH HOH 1079 L HOH 162 5 HOH HOH 1080 L HOH 164 5 HOH HOH 1081 L HOH 166 5 HOH HOH 1082 L HOH 167 5 HOH HOH 1083 L HOH 172 5 HOH HOH 1084 L HOH 174 5 HOH HOH 1085 L HOH 175 5 HOH HOH 1086 L HOH 178 5 HOH HOH 1087 L HOH 179 5 HOH HOH 1088 L HOH 181 5 HOH HOH 1089 L HOH 182 5 HOH HOH 1090 L HOH 183 5 HOH HOH 1091 L HOH 184 5 HOH HOH 1092 L HOH 185 5 HOH HOH 1093 L HOH 188 5 HOH HOH 1094 L HOH 191 5 HOH HOH 1095 L HOH 192 5 HOH HOH 1096 L HOH 193 5 HOH HOH 1097 L HOH 194 5 HOH HOH 1098 L HOH 196 5 HOH HOH 1099 L HOH 202 5 HOH HOH 1100 L HOH 203 5 HOH HOH 1101 L HOH 207 5 HOH HOH 1102 L HOH 208 5 HOH HOH 1103 L HOH 210 5 HOH HOH 1104 L HOH 211 5 HOH HOH 1105 L HOH 215 5 HOH HOH 1106 L HOH 219 5 HOH HOH 1107 L HOH 221 5 HOH HOH 1108 L HOH 224 5 HOH HOH 1109 L HOH 226 5 HOH HOH 1110 L HOH 227 5 HOH HOH 1111 L HOH 229 5 HOH HOH 1112 L HOH 231 5 HOH HOH 1113 L HOH 232 5 HOH HOH 1114 L HOH 238 5 HOH HOH 1115 L HOH 239 5 HOH HOH 1116 L HOH 242 5 HOH HOH 1117 L HOH 243 5 HOH HOH 1118 L HOH 244 5 HOH HOH 1119 L HOH 245 5 HOH HOH 1120 L HOH 249 5 HOH HOH 1121 L HOH 250 5 HOH HOH 1122 L HOH 251 5 HOH HOH 1123 L HOH 252 5 HOH HOH 1124 L HOH 255 5 HOH HOH 1125 L HOH 256 5 HOH HOH 1126 L HOH 257 5 HOH HOH 1127 L HOH 258 5 HOH HOH 1128 L HOH 259 5 HOH HOH 1129 L HOH 260 5 HOH HOH 1130 L HOH 261 5 HOH HOH 1131 L HOH 262 5 HOH HOH 1132 L HOH 264 5 HOH HOH 1133 L HOH 265 5 HOH HOH 1134 L HOH 267 5 HOH HOH 1135 L HOH 268 5 HOH HOH 1136 L HOH 270 5 HOH HOH 1137 L HOH 274 5 HOH HOH 1138 L HOH 1 5 HOH HOH 214 H HOH 3 5 HOH HOH 215 H HOH 4 5 HOH HOH 216 H HOH 5 5 HOH HOH 217 H HOH 6 5 HOH HOH 218 H HOH 9 5 HOH HOH 219 H HOH 10 5 HOH HOH 220 H HOH 16 5 HOH HOH 221 H HOH 18 5 HOH HOH 222 H HOH 20 5 HOH HOH 223 H HOH 24 5 HOH HOH 224 H HOH 25 5 HOH HOH 225 H HOH 28 5 HOH HOH 226 H HOH 30 5 HOH HOH 227 H HOH 31 5 HOH HOH 228 H HOH 32 5 HOH HOH 229 H HOH 35 5 HOH HOH 230 H HOH 36 5 HOH HOH 231 H HOH 39 5 HOH HOH 232 H HOH 40 5 HOH HOH 233 H HOH 41 5 HOH HOH 234 H HOH 44 5 HOH HOH 235 H HOH 46 5 HOH HOH 236 H HOH 48 5 HOH HOH 237 H HOH 51 5 HOH HOH 238 H HOH 53 5 HOH HOH 239 H HOH 57 5 HOH HOH 240 H HOH 58 5 HOH HOH 241 H HOH 60 5 HOH HOH 242 H HOH 61 5 HOH HOH 243 H HOH 62 5 HOH HOH 244 H HOH 65 5 HOH HOH 245 H HOH 67 5 HOH HOH 246 H HOH 68 5 HOH HOH 247 H HOH 70 5 HOH HOH 248 H HOH 71 5 HOH HOH 249 H HOH 73 5 HOH HOH 250 H HOH 75 5 HOH HOH 251 H HOH 78 5 HOH HOH 252 H HOH 79 5 HOH HOH 253 H HOH 81 5 HOH HOH 254 H HOH 82 5 HOH HOH 255 H HOH 84 5 HOH HOH 256 H HOH 87 5 HOH HOH 257 H HOH 91 5 HOH HOH 258 H HOH 94 5 HOH HOH 259 H HOH 95 5 HOH HOH 260 H HOH 97 5 HOH HOH 261 H HOH 98 5 HOH HOH 262 H HOH 100 5 HOH HOH 263 H HOH 101 5 HOH HOH 264 H HOH 102 5 HOH HOH 265 H HOH 104 5 HOH HOH 266 H HOH 105 5 HOH HOH 267 H HOH 106 5 HOH HOH 268 H HOH 108 5 HOH HOH 269 H HOH 109 5 HOH HOH 270 H HOH 111 5 HOH HOH 271 H HOH 119 5 HOH HOH 272 H HOH 120 5 HOH HOH 273 H HOH 121 5 HOH HOH 274 H HOH 124 5 HOH HOH 275 H HOH 126 5 HOH HOH 276 H HOH 127 5 HOH HOH 277 H HOH 128 5 HOH HOH 278 H HOH 131 5 HOH HOH 279 H HOH 134 5 HOH HOH 280 H HOH 135 5 HOH HOH 281 H HOH 137 5 HOH HOH 282 H HOH 138 5 HOH HOH 283 H HOH 140 5 HOH HOH 284 H HOH 142 5 HOH HOH 285 H HOH 144 5 HOH HOH 286 H HOH 146 5 HOH HOH 287 H HOH 147 5 HOH HOH 288 H HOH 152 5 HOH HOH 289 H HOH 153 5 HOH HOH 290 H HOH 156 5 HOH HOH 291 H HOH 158 5 HOH HOH 292 H HOH 163 5 HOH HOH 293 H HOH 165 5 HOH HOH 294 H HOH 168 5 HOH HOH 295 H HOH 169 5 HOH HOH 296 H HOH 170 5 HOH HOH 297 H HOH 171 5 HOH HOH 298 H HOH 173 5 HOH HOH 299 H HOH 176 5 HOH HOH 300 H HOH 177 5 HOH HOH 301 H HOH 180 5 HOH HOH 302 H HOH 186 5 HOH HOH 303 H HOH 187 5 HOH HOH 304 H HOH 189 5 HOH HOH 305 H HOH 190 5 HOH HOH 306 H HOH 195 5 HOH HOH 307 H HOH 197 5 HOH HOH 308 H HOH 198 5 HOH HOH 309 H HOH 199 5 HOH HOH 310 H HOH 200 5 HOH HOH 311 H HOH 201 5 HOH HOH 312 H HOH 204 5 HOH HOH 313 H HOH 205 5 HOH HOH 314 H HOH 206 5 HOH HOH 315 H HOH 209 5 HOH HOH 316 H HOH 212 5 HOH HOH 317 H HOH 213 5 HOH HOH 318 H HOH 214 5 HOH HOH 319 H HOH 216 5 HOH HOH 320 H HOH 217 5 HOH HOH 321 H HOH 218 5 HOH HOH 322 H HOH 220 5 HOH HOH 323 H HOH 222 5 HOH HOH 324 H HOH 223 5 HOH HOH 325 H HOH 228 5 HOH HOH 326 H HOH 230 5 HOH HOH 327 H HOH 233 5 HOH HOH 328 H HOH 234 5 HOH HOH 329 H HOH 235 5 HOH HOH 330 H HOH 236 5 HOH HOH 331 H HOH 237 5 HOH HOH 332 H HOH 240 5 HOH HOH 333 H HOH 241 5 HOH HOH 334 H HOH 246 5 HOH HOH 335 H HOH 247 5 HOH HOH 336 H HOH 248 5 HOH HOH 337 H HOH 253 5 HOH HOH 338 H HOH 254 5 HOH HOH 339 H HOH 263 5 HOH HOH 340 H HOH 266 5 HOH HOH 341 H HOH 269 5 HOH HOH 342 H HOH 271 5 HOH HOH 343 H HOH 272 5 HOH HOH 344 H HOH 273 5 HOH HOH 345 H HOH 275 5 HOH HOH 346 H HOH 276 5 HOH HOH 347 H HOH 38 5 HOH HOH 38 A HOH 83 5 HOH HOH 83 A HOH 136 5 HOH HOH 136 A HOH 143 5 HOH HOH 143 A HOH 161 5 HOH HOH 161 A HOH 225 5 HOH HOH 225 A ASP 1 n 1 ASP 1 L VAL 2 n 2 VAL 2 L LEU 3 n 3 LEU 3 L MET 4 n 4 MET 4 L THR 5 n 5 THR 5 L GLN 6 n 6 GLN 6 L THR 7 n 7 THR 7 L PRO 8 n 8 PRO 8 L LEU 9 n 9 LEU 9 L SER 10 n 10 SER 10 L LEU 11 n 11 LEU 11 L PRO 12 n 12 PRO 12 L VAL 13 n 13 VAL 13 L SER 14 n 14 SER 14 L LEU 15 n 15 LEU 15 L GLY 16 n 16 GLY 16 L ASP 17 n 17 ASP 17 L GLN 18 n 18 GLN 18 L ALA 19 n 19 ALA 19 L SER 20 n 20 SER 20 L ILE 21 n 21 ILE 21 L SER 22 n 22 SER 22 L CYS 23 n 23 CYS 23 L LYS 24 n 24 LYS 24 L SER 25 n 25 SER 25 L SER 26 n 26 SER 26 L GLN 27 n 27 GLN 27 L SER 27 n 28 A SER 27 L ILE 27 n 29 B ILE 27 L VAL 27 n 30 C VAL 27 L HIS 27 n 31 D HIS 27 L SER 27 n 32 E SER 27 L SER 28 n 33 SER 28 L GLY 29 n 34 GLY 29 L ASN 30 n 35 ASN 30 L THR 31 n 36 THR 31 L TYR 32 n 37 TYR 32 L PHE 33 n 38 PHE 33 L GLU 34 n 39 GLU 34 L TRP 35 n 40 TRP 35 L TYR 36 n 41 TYR 36 L LEU 37 n 42 LEU 37 L GLN 38 n 43 GLN 38 L LYS 39 n 44 LYS 39 L PRO 40 n 45 PRO 40 L GLY 41 n 46 GLY 41 L GLN 42 n 47 GLN 42 L SER 43 n 48 SER 43 L PRO 44 n 49 PRO 44 L LYS 45 n 50 LYS 45 L LEU 46 n 51 LEU 46 L LEU 47 n 52 LEU 47 L ILE 48 n 53 ILE 48 L TYR 49 n 54 TYR 49 L LYS 50 n 55 LYS 50 L VAL 51 n 56 VAL 51 L SER 52 n 57 SER 52 L ASN 53 n 58 ASN 53 L ARG 54 n 59 ARG 54 L PHE 55 n 60 PHE 55 L SER 56 n 61 SER 56 L GLY 57 n 62 GLY 57 L VAL 58 n 63 VAL 58 L PRO 59 n 64 PRO 59 L ASP 60 n 65 ASP 60 L ARG 61 n 66 ARG 61 L PHE 62 n 67 PHE 62 L SER 63 n 68 SER 63 L GLY 64 n 69 GLY 64 L SER 65 n 70 SER 65 L GLY 66 n 71 GLY 66 L SER 67 n 72 SER 67 L GLY 68 n 73 GLY 68 L THR 69 n 74 THR 69 L ASP 70 n 75 ASP 70 L PHE 71 n 76 PHE 71 L THR 72 n 77 THR 72 L LEU 73 n 78 LEU 73 L LYS 74 n 79 LYS 74 L ILE 75 n 80 ILE 75 L SER 76 n 81 SER 76 L ARG 77 n 82 ARG 77 L VAL 78 n 83 VAL 78 L GLU 79 n 84 GLU 79 L ALA 80 n 85 ALA 80 L GLU 81 n 86 GLU 81 L ASP 82 n 87 ASP 82 L LEU 83 n 88 LEU 83 L GLY 84 n 89 GLY 84 L VAL 85 n 90 VAL 85 L TYR 86 n 91 TYR 86 L TYR 87 n 92 TYR 87 L CYS 88 n 93 CYS 88 L PHE 89 n 94 PHE 89 L GLN 90 n 95 GLN 90 L GLY 91 n 96 GLY 91 L SER 92 n 97 SER 92 L HIS 93 n 98 HIS 93 L ILE 94 n 99 ILE 94 L PRO 95 n 100 PRO 95 L PHE 96 n 101 PHE 96 L THR 97 n 102 THR 97 L PHE 98 n 103 PHE 98 L GLY 99 n 104 GLY 99 L SER 100 n 105 SER 100 L GLY 101 n 106 GLY 101 L THR 102 n 107 THR 102 L LYS 103 n 108 LYS 103 L LEU 104 n 109 LEU 104 L GLU 105 n 110 GLU 105 L ILE 106 n 111 ILE 106 L LYS 107 n 112 LYS 107 L ARG 108 n 113 ARG 108 L ALA 109 n 114 ALA 109 L ASP 110 n 115 ASP 110 L ALA 111 n 116 ALA 111 L ALA 112 n 117 ALA 112 L PRO 113 n 118 PRO 113 L THR 114 n 119 THR 114 L VAL 115 n 120 VAL 115 L SER 116 n 121 SER 116 L ILE 117 n 122 ILE 117 L PHE 118 n 123 PHE 118 L PRO 119 n 124 PRO 119 L PRO 120 n 125 PRO 120 L SER 121 n 126 SER 121 L SER 122 n 127 SER 122 L GLU 123 n 128 GLU 123 L GLN 124 n 129 GLN 124 L LEU 125 n 130 LEU 125 L THR 126 n 131 THR 126 L SER 127 n 132 SER 127 L GLY 128 n 133 GLY 128 L GLY 129 n 134 GLY 129 L ALA 130 n 135 ALA 130 L SER 131 n 136 SER 131 L VAL 132 n 137 VAL 132 L VAL 133 n 138 VAL 133 L CYS 134 n 139 CYS 134 L PHE 135 n 140 PHE 135 L LEU 136 n 141 LEU 136 L ASN 137 n 142 ASN 137 L ASN 138 n 143 ASN 138 L PHE 139 n 144 PHE 139 L TYR 140 n 145 TYR 140 L PRO 141 n 146 PRO 141 L LYS 142 n 147 LYS 142 L ASP 143 n 148 ASP 143 L ILE 144 n 149 ILE 144 L ASN 145 n 150 ASN 145 L VAL 146 n 151 VAL 146 L LYS 147 n 152 LYS 147 L TRP 148 n 153 TRP 148 L LYS 149 n 154 LYS 149 L ILE 150 n 155 ILE 150 L ASP 151 n 156 ASP 151 L GLY 152 n 157 GLY 152 L SER 153 n 158 SER 153 L GLU 154 n 159 GLU 154 L ARG 155 n 160 ARG 155 L GLN 156 n 161 GLN 156 L ASN 157 n 162 ASN 157 L GLY 158 n 163 GLY 158 L VAL 159 n 164 VAL 159 L LEU 160 n 165 LEU 160 L ASN 161 n 166 ASN 161 L SER 162 n 167 SER 162 L TRP 163 n 168 TRP 163 L THR 164 n 169 THR 164 L ASP 165 n 170 ASP 165 L GLN 166 n 171 GLN 166 L ASP 167 n 172 ASP 167 L SER 168 n 173 SER 168 L LYS 169 n 174 LYS 169 L ASP 170 n 175 ASP 170 L SER 171 n 176 SER 171 L THR 172 n 177 THR 172 L TYR 173 n 178 TYR 173 L SER 174 n 179 SER 174 L MET 175 n 180 MET 175 L SER 176 n 181 SER 176 L SER 177 n 182 SER 177 L THR 178 n 183 THR 178 L LEU 179 n 184 LEU 179 L THR 180 n 185 THR 180 L LEU 181 n 186 LEU 181 L THR 182 n 187 THR 182 L LYS 183 n 188 LYS 183 L ASP 184 n 189 ASP 184 L GLU 185 n 190 GLU 185 L TYR 186 n 191 TYR 186 L GLU 187 n 192 GLU 187 L ARG 188 n 193 ARG 188 L HIS 189 n 194 HIS 189 L ASN 190 n 195 ASN 190 L SER 191 n 196 SER 191 L TYR 192 n 197 TYR 192 L THR 193 n 198 THR 193 L CYS 194 n 199 CYS 194 L GLU 195 n 200 GLU 195 L ALA 196 n 201 ALA 196 L THR 197 n 202 THR 197 L HIS 198 n 203 HIS 198 L LYS 199 n 204 LYS 199 L THR 200 n 205 THR 200 L SER 201 n 206 SER 201 L THR 202 n 207 THR 202 L SER 203 n 208 SER 203 L PRO 204 n 209 PRO 204 L ILE 205 n 210 ILE 205 L VAL 206 n 211 VAL 206 L LYS 207 n 212 LYS 207 L SER 208 n 213 SER 208 L PHE 209 n 214 PHE 209 L ASN 210 n 215 ASN 210 L ARG 211 n 216 ARG 211 L GLN 1 n 1 GLN 1 H ILE 2 n 2 ILE 2 H GLN 3 n 3 GLN 3 H LEU 4 n 4 LEU 4 H VAL 5 n 5 VAL 5 H GLN 6 n 6 GLN 6 H SER 7 n 7 SER 7 H GLY 8 n 8 GLY 8 H PRO 9 n 9 PRO 9 H GLU 10 n 10 GLU 10 H LEU 11 n 11 LEU 11 H LYS 12 n 12 LYS 12 H THR 13 n 13 THR 13 H PRO 14 n 14 PRO 14 H GLY 15 n 15 GLY 15 H GLU 16 n 16 GLU 16 H THR 17 n 17 THR 17 H VAL 18 n 18 VAL 18 H ARG 19 n 19 ARG 19 H ILE 20 n 20 ILE 20 H SER 21 n 21 SER 21 H CYS 22 n 22 CYS 22 H LYS 23 n 23 LYS 23 H ALA 24 n 24 ALA 24 H SER 25 n 25 SER 25 H GLY 26 n 26 GLY 26 H TYR 27 n 27 TYR 27 H THR 28 n 28 THR 28 H PHE 29 n 29 PHE 29 H THR 30 n 30 THR 30 H THR 31 n 31 THR 31 H TYR 32 n 32 TYR 32 H GLY 33 n 33 GLY 33 H MET 34 n 34 MET 34 H SER 35 n 35 SER 35 H TRP 36 n 36 TRP 36 H VAL 37 n 37 VAL 37 H LYS 38 n 38 LYS 38 H GLN 39 n 39 GLN 39 H THR 40 n 40 THR 40 H PRO 41 n 41 PRO 41 H GLY 42 n 42 GLY 42 H LYS 43 n 43 LYS 43 H GLY 44 n 44 GLY 44 H PHE 45 n 45 PHE 45 H LYS 46 n 46 LYS 46 H TRP 47 n 47 TRP 47 H MET 48 n 48 MET 48 H GLY 49 n 49 GLY 49 H TRP 50 n 50 TRP 50 H ILE 51 n 51 ILE 51 H ASN 52 n 52 ASN 52 H THR 52 n 53 A THR 52 H TYR 53 n 54 TYR 53 H SER 54 n 55 SER 54 H GLY 55 n 56 GLY 55 H VAL 56 n 57 VAL 56 H PRO 57 n 58 PRO 57 H THR 58 n 59 THR 58 H TYR 59 n 60 TYR 59 H ALA 60 n 61 ALA 60 H ASP 61 n 62 ASP 61 H ASP 62 n 63 ASP 62 H PHE 63 n 64 PHE 63 H LYS 64 n 65 LYS 64 H GLY 65 n 66 GLY 65 H ARG 66 n 67 ARG 66 H PHE 67 n 68 PHE 67 H ALA 68 n 69 ALA 68 H PHE 69 n 70 PHE 69 H SER 70 n 71 SER 70 H LEU 71 n 72 LEU 71 H GLU 72 n 73 GLU 72 H THR 73 n 74 THR 73 H SER 74 n 75 SER 74 H ALA 75 n 76 ALA 75 H SER 76 n 77 SER 76 H THR 77 n 78 THR 77 H ALA 78 n 79 ALA 78 H TYR 79 n 80 TYR 79 H LEU 80 n 81 LEU 80 H GLN 81 n 82 GLN 81 H ILE 82 n 83 ILE 82 H ASN 82 n 84 A ASN 82 H ASN 82 n 85 B ASN 82 H LEU 82 n 86 C LEU 82 H LYS 83 n 87 LYS 83 H ASN 84 n 88 ASN 84 H GLU 85 n 89 GLU 85 H ASP 86 n 90 ASP 86 H THR 87 n 91 THR 87 H ALA 88 n 92 ALA 88 H THR 89 n 93 THR 89 H TYR 90 n 94 TYR 90 H PHE 91 n 95 PHE 91 H CYS 92 n 96 CYS 92 H ALA 93 n 97 ALA 93 H ARG 94 n 98 ARG 94 H ARG 95 n 99 ARG 95 H SER 96 n 100 SER 96 H TRP 100 n 101 A TRP 100 H TYR 100 n 102 B TYR 100 H PHE 100 n 103 C PHE 100 H ASP 101 n 104 ASP 101 H VAL 102 n 105 VAL 102 H TRP 103 n 106 TRP 103 H GLY 104 n 107 GLY 104 H THR 105 n 108 THR 105 H GLY 106 n 109 GLY 106 H THR 107 n 110 THR 107 H THR 108 n 111 THR 108 H VAL 109 n 112 VAL 109 H THR 110 n 113 THR 110 H VAL 111 n 114 VAL 111 H SER 112 n 115 SER 112 H SER 113 n 116 SER 113 H ALA 114 n 117 ALA 114 H LYS 115 n 118 LYS 115 H THR 116 n 119 THR 116 H THR 117 n 120 THR 117 H PRO 118 n 121 PRO 118 H PRO 119 n 122 PRO 119 H SER 120 n 123 SER 120 H VAL 121 n 124 VAL 121 H TYR 122 n 125 TYR 122 H PRO 123 n 126 PRO 123 H LEU 124 n 127 LEU 124 H ALA 125 n 128 ALA 125 H PRO 126 n 129 PRO 126 H n 130 127 H n 131 128 H n 132 129 H n 133 130 H n 134 131 H n 135 132 H n 136 133 H SER 134 n 137 SER 134 H MET 135 n 138 MET 135 H VAL 136 n 139 VAL 136 H THR 137 n 140 THR 137 H LEU 138 n 141 LEU 138 H GLY 139 n 142 GLY 139 H CYS 140 n 143 CYS 140 H LEU 141 n 144 LEU 141 H VAL 142 n 145 VAL 142 H LYS 143 n 146 LYS 143 H GLY 144 n 147 GLY 144 H TYR 145 n 148 TYR 145 H PHE 146 n 149 PHE 146 H PRO 147 n 150 PRO 147 H GLU 148 n 151 GLU 148 H PRO 149 n 152 PRO 149 H VAL 150 n 153 VAL 150 H THR 151 n 154 THR 151 H VAL 152 n 155 VAL 152 H THR 153 n 156 THR 153 H TRP 154 n 157 TRP 154 H ASN 155 n 158 ASN 155 H SER 156 n 159 SER 156 H GLY 157 n 160 GLY 157 H SER 158 n 161 SER 158 H LEU 159 n 162 LEU 159 H SER 160 n 163 SER 160 H SER 161 n 164 SER 161 H GLY 162 n 165 GLY 162 H VAL 163 n 166 VAL 163 H HIS 164 n 167 HIS 164 H THR 165 n 168 THR 165 H PHE 166 n 169 PHE 166 H PRO 167 n 170 PRO 167 H ALA 168 n 171 ALA 168 H VAL 169 n 172 VAL 169 H LEU 170 n 173 LEU 170 H GLN 171 n 174 GLN 171 H SER 172 n 175 SER 172 H ASP 173 n 176 ASP 173 H LEU 174 n 177 LEU 174 H TYR 175 n 178 TYR 175 H THR 176 n 179 THR 176 H LEU 177 n 180 LEU 177 H SER 178 n 181 SER 178 H SER 179 n 182 SER 179 H SER 180 n 183 SER 180 H VAL 181 n 184 VAL 181 H THR 182 n 185 THR 182 H VAL 183 n 186 VAL 183 H PRO 184 n 187 PRO 184 H SER 185 n 188 SER 185 H SER 186 n 189 SER 186 H THR 187 n 190 THR 187 H TRP 188 n 191 TRP 188 H PRO 189 n 192 PRO 189 H SER 190 n 193 SER 190 H GLN 191 n 194 GLN 191 H THR 192 n 195 THR 192 H VAL 193 n 196 VAL 193 H THR 194 n 197 THR 194 H CYS 195 n 198 CYS 195 H ASN 196 n 199 ASN 196 H VAL 197 n 200 VAL 197 H ALA 198 n 201 ALA 198 H HIS 199 n 202 HIS 199 H PRO 200 n 203 PRO 200 H ALA 201 n 204 ALA 201 H SER 202 n 205 SER 202 H SER 203 n 206 SER 203 H THR 204 n 207 THR 204 H LYS 205 n 208 LYS 205 H VAL 206 n 209 VAL 206 H ASP 207 n 210 ASP 207 H LYS 208 n 211 LYS 208 H LYS 209 n 212 LYS 209 H ILE 210 n 213 ILE 210 H VAL 211 n 214 VAL 211 H PRO 212 n 215 PRO 212 H ARG 213 n 216 ARG 213 H DVA 1 n 1 DVA 1 A DPR 2 n 2 DPR 2 A GLY 3 n 3 GLY 3 A DSN 4 n 4 DSN 4 A DGN 5 n 5 DGN 5 A DHI 6 n 6 DHI 6 A DTY 7 n 7 DTY 7 A DAS 8 n 8 DAS 8 A DSN 9 n 9 DSN 9 A author_defined_assembly 3 trimeric A DVA 1 D-VALINE C DVA 1 VAL A DPR 2 D-PROLINE C DPR 2 PRO A DSN 4 D-SERINE C DSN 4 SER A DGN 5 D-GLUTAMINE C DGN 5 GLN A DHI 6 D-HISTIDINE C DHI 6 HIS A DTY 7 D-TYROSINE C DTY 7 TYR A DAS 8 D-ASPARTIC ACID C DAS 8 ASP A DSN 9 D-SERINE C DSN 9 SER 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 L N THR 5 A N THR 5 L O LYS 24 A O LYS 24 L N ILE 21 A N ILE 21 L O LEU 73 A O LEU 78 L O LYS 74 A O LYS 79 L N SER 63 A N SER 68 L N LEU 11 A N LEU 11 L O LYS 103 A O LYS 108 L O LEU 104 A O LEU 109 L N GLY 84 A N GLY 89 L O VAL 85 A O VAL 90 L N GLN 38 A N GLN 43 L N TRP 35 A N TRP 40 L O LEU 47 A O LEU 52 L N TYR 49 A N TYR 54 L O ASN 53 A O ASN 58 L N LEU 11 A N LEU 11 L O LYS 103 A O LYS 108 L O LEU 104 A O LEU 109 L N GLY 84 A N GLY 89 L N GLN 90 A N GLN 95 L O THR 97 A O THR 102 L N THR 114 A N THR 119 L O ASN 137 A O ASN 142 L N ALA 130 A N ALA 135 L O LEU 181 A O LEU 186 L O THR 178 A O THR 183 L N LEU 160 A N LEU 165 L O SER 153 A O SER 158 L N ILE 150 A N ILE 155 L N LYS 147 A N LYS 152 L O GLU 195 A O GLU 200 L N TYR 192 A N TYR 197 L O PHE 209 A O PHE 214 H N VAL 5 B N VAL 5 H O LYS 23 B O LYS 23 H N ILE 20 B N ILE 20 H O LEU 80 B O LEU 81 H O TYR 79 B O TYR 80 H N SER 70 B N SER 71 H N LYS 12 B N LYS 12 H O THR 110 B O THR 113 H O VAL 109 B O VAL 112 H N ALA 88 B N ALA 92 H O THR 89 B O THR 93 H N GLN 39 B N GLN 39 H N LYS 38 B N LYS 38 H O LYS 46 B O LYS 46 H N TRP 50 B N TRP 50 H O THR 58 B O THR 59 H N LYS 12 B N LYS 12 H O THR 110 B O THR 113 H O VAL 109 B O VAL 112 H N ALA 88 B N ALA 92 H N ARG 94 B N ARG 98 H O VAL 102 B O VAL 105 H N TYR 122 B N TYR 125 H O LEU 141 B O LEU 144 H N VAL 142 B N VAL 145 H O LEU 177 B O LEU 180 H O SER 180 B O SER 183 H N HIS 164 B N HIS 167 H N TYR 122 B N TYR 125 H O LEU 141 B O LEU 144 H N VAL 142 B N VAL 145 H O LEU 177 B O LEU 180 H O LEU 174 B O LEU 177 H N GLN 171 B N GLN 174 H N THR 151 B N THR 154 H O ALA 198 B O ALA 201 H N HIS 199 B N HIS 202 H O THR 204 B O THR 207 1 H GLY 127 B GLY 130 1 Y 1 H SER 128 B SER 131 1 Y 1 H ALA 129 B ALA 132 1 Y 1 H ALA 130 B ALA 133 1 Y 1 H GLN 131 B GLN 134 1 Y 1 H THR 132 B THR 135 1 Y 1 H ASN 133 B ASN 136 1 Y 1 14.65 2.30 115.30 129.95 H H H CA CB CG LEU LEU LEU 177 177 177 N 1 L VAL 51 66.83 -49.00 1 H LYS 43 -156.09 -17.27 1 H SER 96 -104.37 -83.03 1 H LEU 174 69.01 -163.67 1 A DPR 2 76.82 -31.65 23.0271 -2.057 0.0 0.0 0.188 0.0 1.868 The current model includes the FAB fragment TE33, residues DVA A 1 - DSN A 9 of the bound D-amino acid peptide D2, 276 water molecules and 2 CITRATE ion. The light and heavy chains have been designated *L* and *H*, respectively. Peptide has been designated *A*. The numbering of TE33 residues is essentially according to E. KABAT (E.A. KABAT,T.T. WU, H.M. PERRY, K.S. GOTTESMAN, sequences of proteins of Imuunological interest, 5TH ED.,(1991), NATIONAL INSTITUTES OF HEALTH, BETHESDA, MD.). There is no electron density corresponding to the 7-residue stretch H 127 - H 133 in the constant domain of heavy chain H. 0.248 0.198 0.201 0.201 1.78 23 1989 40407 40407 93.4 random 1 isotropic THROUGHOUT 0 0 MOLECULAR REPLACEMENT PDB ENTRY 1TET Engh & Huber 0.09 0.21 5.0 0.13 0.26 1.78 23 276 3656 26 0 3354 0.0119 1.91236 28.06804 1.94903 0.261 0 0.217 1.84 172 3796 85.05 20.25 1.78 23.0 1ZEA 40461 40461 0 0 0.064 1 14.14 4.78 93.4 1.78 1.81 3.27 1916 0.317 3.29 89.4 data reduction DENZO data scaling SCALEPACK refinement CNS 1.1 phasing CNS 1.1 Structure of the anti-cholera toxin antibody Fab fragment TE33 in complex with a D-peptide 1 N N 2 N N 3 N N 4 N N 4 N N 5 N N 5 N N 5 N N L GLU 79 A GLU 84 HELX_P L LEU 83 A LEU 88 5 1 5 L SER 121 A SER 126 HELX_P L SER 127 A SER 132 1 2 7 L LYS 183 A LYS 188 HELX_P L GLU 187 A GLU 192 1 3 5 H THR 28 B THR 28 HELX_P H TYR 32 B TYR 32 5 4 5 H ASP 61 B ASP 62 HELX_P H LYS 64 B LYS 65 5 5 4 H THR 73 B THR 74 HELX_P H ALA 75 B ALA 76 5 6 3 H LYS 83 B LYS 87 HELX_P H THR 87 B THR 91 5 7 5 H SER 156 B SER 159 HELX_P H SER 158 B SER 161 5 8 3 H SER 186 B SER 189 HELX_P H TRP 188 B TRP 191 5 9 3 H PRO 200 B PRO 203 HELX_P H SER 203 B SER 206 5 10 4 disulf 2.077 L CYS 23 A SG CYS 23 1_555 L CYS 88 A SG CYS 93 1_555 disulf 2.037 L CYS 134 A SG CYS 139 1_555 L CYS 194 A SG CYS 199 1_555 disulf 2.051 H CYS 22 B SG CYS 22 1_555 H CYS 92 B SG CYS 96 1_555 disulf 2.036 H CYS 140 B SG CYS 143 1_555 H CYS 195 B SG CYS 198 1_555 covale 1.359 both A DVA 1 C C DVA 1 1_555 A DPR 2 C N DPR 2 1_555 covale 1.326 both A DPR 2 C C DPR 2 1_555 A GLY 3 C N GLY 3 1_555 covale 1.324 both A GLY 3 C C GLY 3 1_555 A DSN 4 C N DSN 4 1_555 covale 1.321 both A DSN 4 C C DSN 4 1_555 A DGN 5 C N DGN 5 1_555 covale 1.334 both A DGN 5 C C DGN 5 1_555 A DHI 6 C N DHI 6 1_555 covale 1.329 both A DHI 6 C C DHI 6 1_555 A DTY 7 C N DTY 7 1_555 covale 1.332 both A DTY 7 C C DTY 7 1_555 A DAS 8 C N DAS 8 1_555 covale 1.334 both A DAS 8 C C DAS 8 1_555 A DSN 9 C N DSN 9 1_555 IMMUNE SYSTEM polyspecificity, cross-reactivity, anti-cholera toxin, antigen-antibody complex, antigen recognition, substitution matrix, IMMUNE SYSTEM L THR 7 A THR 7 1 L PRO 8 A PRO 8 0.06 L ILE 94 A ILE 99 1 L PRO 95 A PRO 100 0.32 L TYR 140 A TYR 145 1 L PRO 141 A PRO 146 0.62 H PHE 146 B PHE 149 1 H PRO 147 B PRO 150 -0.04 H GLU 148 B GLU 151 1 H PRO 149 B PRO 152 0.21 H TRP 188 B TRP 191 1 H PRO 189 B PRO 192 0.95 A DVA 1 C DVA 1 1 A DPR 2 C DPR 2 0.22 A2NHM3_MOUSE UNP 1 A2NHM3 Q921A6_MOUSE UNP 2 Q921A6 1ZEA PDB 3 1ZEA 1 216 1ZEA 1 211 A2NHM3 L 1 1 216 6 118 1ZEA 6 113 Q921A6 H 2 6 116 1 9 1ZEA 1 9 1ZEA A 3 1 9 4 6 4 4 4 4 6 4 4 4 3 anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel L MET 4 A MET 4 L THR 7 A THR 7 L ALA 19 A ALA 19 L SER 25 A SER 25 L ASP 70 A ASP 75 L ILE 75 A ILE 80 L PHE 62 A PHE 67 L SER 67 A SER 72 L SER 10 A SER 10 L SER 14 A SER 14 L THR 102 A THR 107 L LYS 107 A LYS 112 L GLY 84 A GLY 89 L GLN 90 A GLN 95 L PHE 33 A PHE 38 L GLN 38 A GLN 43 L LYS 45 A LYS 50 L TYR 49 A TYR 54 L ASN 53 A ASN 58 L ARG 54 A ARG 59 L SER 10 A SER 10 L SER 14 A SER 14 L THR 102 A THR 107 L LYS 107 A LYS 112 L GLY 84 A GLY 89 L GLN 90 A GLN 95 L THR 97 A THR 102 L PHE 98 A PHE 103 L THR 114 A THR 119 L PHE 118 A PHE 123 L GLY 129 A GLY 134 L PHE 139 A PHE 144 L TYR 173 A TYR 178 L THR 182 A THR 187 L VAL 159 A VAL 164 L TRP 163 A TRP 168 L SER 153 A SER 158 L ARG 155 A ARG 160 L ASN 145 A ASN 150 L ILE 150 A ILE 155 L SER 191 A SER 196 L THR 197 A THR 202 L ILE 205 A ILE 210 L ASN 210 A ASN 215 H GLN 3 B GLN 3 H GLN 6 B GLN 6 H VAL 18 B VAL 18 H SER 25 B SER 25 H THR 77 B THR 78 H ILE 82 B ILE 83 H PHE 67 B PHE 68 H GLU 72 B GLU 73 H GLU 10 B GLU 10 H LYS 12 B LYS 12 H THR 107 B THR 110 H VAL 111 B VAL 114 H ALA 88 B ALA 92 H ARG 95 B ARG 99 H GLY 33 B GLY 33 H THR 40 B THR 40 H GLY 44 B GLY 44 H ILE 51 B ILE 51 H PRO 57 B PRO 58 H TYR 59 B TYR 60 H GLU 10 B GLU 10 H LYS 12 B LYS 12 H THR 107 B THR 110 H VAL 111 B VAL 114 H ALA 88 B ALA 92 H ARG 95 B ARG 99 H VAL 102 B VAL 105 H TRP 103 B TRP 106 H SER 120 B SER 123 H LEU 124 B LEU 127 H MET 135 B MET 138 H TYR 145 B TYR 148 H LEU 174 B LEU 177 H PRO 184 B PRO 187 H VAL 163 B VAL 166 H THR 165 B THR 168 H SER 120 B SER 123 H LEU 124 B LEU 127 H MET 135 B MET 138 H TYR 145 B TYR 148 H LEU 174 B LEU 177 H PRO 184 B PRO 187 H VAL 169 B VAL 172 H GLN 171 B GLN 174 H THR 151 B THR 154 H TRP 154 B TRP 157 H THR 194 B THR 197 H HIS 199 B HIS 202 H THR 204 B THR 207 H LYS 209 B LYS 212 BINDING SITE FOR RESIDUE CIT L 1001 L CIT 1001 Software 5 BINDING SITE FOR RESIDUE CIT L 1002 L CIT 1002 Software 7 H TRP 100 B TRP 101 A 5 1_555 L TYR 49 A TYR 54 5 1_555 L LYS 50 A LYS 55 5 1_555 L ASN 53 A ASN 58 5 1_555 L HOH 1097 F HOH 5 1_555 A DHI 6 C DHI 6 7 2_665 A HOH 136 H HOH 7 1_555 L SER 27 A SER 32 E 7 1_555 L SER 92 A SER 97 7 1_555 L HIS 93 A HIS 98 7 1_555 L ILE 94 A ILE 99 7 1_555 L HOH 1025 F HOH 7 1_555 18 P 21 21 2