data_1ZF5
# 
_entry.id   1ZF5 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.387 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   1ZF5         pdb_00001zf5 10.2210/pdb1zf5/pdb 
NDB   BD0079       ?            ?                   
RCSB  RCSB032648   ?            ?                   
WWPDB D_1000032648 ?            ?                   
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 2005-05-10 
2 'Structure model' 1 1 2008-04-30 
3 'Structure model' 1 2 2011-07-13 
4 'Structure model' 1 3 2017-10-11 
5 'Structure model' 1 4 2024-02-14 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' 'Version format compliance' 
2 3 'Structure model' 'Version format compliance' 
3 4 'Structure model' 'Refinement description'    
4 5 'Structure model' 'Data collection'           
5 5 'Structure model' 'Database references'       
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1 4 'Structure model' software       
2 5 'Structure model' chem_comp_atom 
3 5 'Structure model' chem_comp_bond 
4 5 'Structure model' database_2     
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1 5 'Structure model' '_database_2.pdbx_DOI'                
2 5 'Structure model' '_database_2.pdbx_database_accession' 
# 
_pdbx_database_status.entry_id                        1ZF5 
_pdbx_database_status.deposit_site                    RCSB 
_pdbx_database_status.process_site                    RCSB 
_pdbx_database_status.recvd_initial_deposition_date   2005-04-19 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.status_code_sf                  REL 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.SG_entry                        ? 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.methods_development_category    ? 
_pdbx_database_status.status_code_nmr_data            ? 
# 
loop_
_pdbx_database_related.db_name 
_pdbx_database_related.db_id 
_pdbx_database_related.details 
_pdbx_database_related.content_type 
PDB 1P4Y   .                          unspecified 
PDB 1P4Z   .                          unspecified 
PDB 1DCW   .                          unspecified 
PDB 1DCV   .                          unspecified 
NDB BD0035 'Isomorphous to structure' unspecified 
NDB BD0036 'Isomorphous to structure' unspecified 
PDB 1ZEW   .                          unspecified 
PDB 1ZEX   .                          unspecified 
PDB 1ZEY   .                          unspecified 
PDB 1ZEZ   .                          unspecified 
PDB 1ZF0   .                          unspecified 
PDB 1ZF1   .                          unspecified 
PDB 1ZF2   .                          unspecified 
PDB 1ZF3   .                          unspecified 
PDB 1ZF4   .                          unspecified 
PDB 1ZF6   .                          unspecified 
PDB 1ZF7   .                          unspecified 
PDB 1ZF8   .                          unspecified 
PDB 1ZF9   .                          unspecified 
PDB 1ZFA   .                          unspecified 
PDB 1ZFB   .                          unspecified 
PDB 1ZFC   .                          unspecified 
PDB 1ZFE   .                          unspecified 
PDB 1ZFF   .                          unspecified 
PDB 1ZFG   .                          unspecified 
PDB 1ZFH   .                          unspecified 
PDB 1ZFM   .                          unspecified 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'Hays, F.A.'      1 
'Teegarden, A.T.' 2 
'Jones, Z.J.R.'   3 
'Harms, M.'       4 
'Raup, D.'        5 
'Watson, J.'      6 
'Cavaliere, E.'   7 
'Ho, P.S.'        8 
# 
_citation.id                        primary 
_citation.title                     'How sequence defines structure: a crystallographic map of DNA structure and conformation.' 
_citation.journal_abbrev            Proc.Natl.Acad.Sci.Usa 
_citation.journal_volume            102 
_citation.page_first                7157 
_citation.page_last                 7162 
_citation.year                      2005 
_citation.journal_id_ASTM           PNASA6 
_citation.country                   US 
_citation.journal_id_ISSN           0027-8424 
_citation.journal_id_CSD            0040 
_citation.book_publisher            ? 
_citation.pdbx_database_id_PubMed   15870206 
_citation.pdbx_database_id_DOI      10.1073/pnas.0409455102 
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Hays, F.A.'    1 ? 
primary 'Teegarden, A.' 2 ? 
primary 'Jones, Z.J.'   3 ? 
primary 'Harms, M.'     4 ? 
primary 'Raup, D.'      5 ? 
primary 'Watson, J.'    6 ? 
primary 'Cavaliere, E.' 7 ? 
primary 'Ho, P.S.'      8 ? 
# 
_entity.id                         1 
_entity.type                       polymer 
_entity.src_method                 syn 
_entity.pdbx_description           "5'-D(*CP*CP*AP*GP*CP*GP*CP*TP*GP*G)-3'" 
_entity.formula_weight             3045.992 
_entity.pdbx_number_of_molecules   1 
_entity.pdbx_ec                    ? 
_entity.pdbx_mutation              ? 
_entity.pdbx_fragment              ? 
_entity.details                    ? 
# 
_entity_poly.entity_id                      1 
_entity_poly.type                           polydeoxyribonucleotide 
_entity_poly.nstd_linkage                   no 
_entity_poly.nstd_monomer                   no 
_entity_poly.pdbx_seq_one_letter_code       '(DC)(DC)(DA)(DG)(DC)(DG)(DC)(DT)(DG)(DG)' 
_entity_poly.pdbx_seq_one_letter_code_can   CCAGCGCTGG 
_entity_poly.pdbx_strand_id                 A 
_entity_poly.pdbx_target_identifier         ? 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1  DC n 
1 2  DC n 
1 3  DA n 
1 4  DG n 
1 5  DC n 
1 6  DG n 
1 7  DC n 
1 8  DT n 
1 9  DG n 
1 10 DG n 
# 
_pdbx_entity_src_syn.entity_id              1 
_pdbx_entity_src_syn.pdbx_src_id            1 
_pdbx_entity_src_syn.pdbx_alt_source_flag   sample 
_pdbx_entity_src_syn.pdbx_beg_seq_num       ? 
_pdbx_entity_src_syn.pdbx_end_seq_num       ? 
_pdbx_entity_src_syn.organism_scientific    ? 
_pdbx_entity_src_syn.organism_common_name   ? 
_pdbx_entity_src_syn.ncbi_taxonomy_id       ? 
_pdbx_entity_src_syn.details                
;DNA WAS SYNTHESIZED ON AN APPLIED BIOSYSTEMS DNA SYNTHESIZER USING PHOSPHORAMIDITE CHEMISTRY, WITH THE TRITYL-PROTECTING GROUP LEFT INTACT AT THE 5'-TERMINAL NUCLEOTIDE THEN DEPROTECTED BY TREATMENT WITH 3% ACETIC ACID FOR FIFTEEN MINUTES, NEUTRALIZED WITH AMMONIUM HYDROXIDE, AND DESALTED ON A SIGMA G-25 SEPHADEX COLUMN.
;
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 
DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE"  ? 'C9 H14 N3 O7 P'  307.197 
DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 
DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE"         ? 'C10 H15 N2 O8 P' 322.208 
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1  DC 1  1  1  DC C A . n 
A 1 2  DC 2  2  2  DC C A . n 
A 1 3  DA 3  3  3  DA A A . n 
A 1 4  DG 4  4  4  DG G A . n 
A 1 5  DC 5  5  5  DC C A . n 
A 1 6  DG 6  6  6  DG G A . n 
A 1 7  DC 7  7  7  DC C A . n 
A 1 8  DT 8  8  8  DT T A . n 
A 1 9  DG 9  9  9  DG G A . n 
A 1 10 DG 10 10 10 DG G A . n 
# 
loop_
_software.name 
_software.version 
_software.date 
_software.type 
_software.contact_author 
_software.contact_author_email 
_software.classification 
_software.location 
_software.language 
_software.citation_id 
_software.pdbx_ordinal 
DENZO     .        ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data reduction' 
http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ?       ? 1 
SCALEPACK .        ? package 'Zbyszek Otwinowski' zbyszek@mix.swmed.edu 'data scaling'   
http://www.lnls.br/infra/linhasluz/denzo-hkl.htm ?       ? 2 
REFMAC    5.2.0003 ? program 'Murshudov, G.N.'    ccp4@dl.ac.uk         refinement       http://www.ccp4.ac.uk/main.html Fortran ? 
3 
EPMR      .        ? ?       ?                    ?                     phasing          ? ?       ? 4 
# 
_cell.entry_id           1ZF5 
_cell.length_a           31.687 
_cell.length_b           25.721 
_cell.length_c           34.089 
_cell.angle_alpha        90.00 
_cell.angle_beta         116.71 
_cell.angle_gamma        90.00 
_cell.Z_PDB              4 
_cell.pdbx_unique_axis   ? 
# 
_symmetry.entry_id                         1ZF5 
_symmetry.space_group_name_H-M             'C 1 2 1' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                5 
_symmetry.space_group_name_Hall            ? 
# 
_exptl.entry_id          1ZF5 
_exptl.method            'X-RAY DIFFRACTION' 
_exptl.crystals_number   1 
# 
_exptl_crystal.id                    1 
_exptl_crystal.density_meas          ? 
_exptl_crystal.density_Matthews      2.04 
_exptl_crystal.density_percent_sol   39.62 
_exptl_crystal.description           ? 
_exptl_crystal.F_000                 ? 
_exptl_crystal.preparation           ? 
# 
_exptl_crystal_grow.crystal_id      1 
_exptl_crystal_grow.method          ? 
_exptl_crystal_grow.temp            298 
_exptl_crystal_grow.temp_details    ? 
_exptl_crystal_grow.pH              7.00 
_exptl_crystal_grow.pdbx_details    
'Na Cacodylate, CaCl2, Spermine, MPD in resevoir, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 298K, pH 7.00' 
_exptl_crystal_grow.pdbx_pH_range   . 
# 
loop_
_exptl_crystal_grow_comp.crystal_id 
_exptl_crystal_grow_comp.id 
_exptl_crystal_grow_comp.sol_id 
_exptl_crystal_grow_comp.name 
_exptl_crystal_grow_comp.conc 
_exptl_crystal_grow_comp.volume 
_exptl_crystal_grow_comp.details 
1 1 1 'Na Cacodylate' ? ? ? 
1 2 1 CaCl2           ? ? ? 
1 3 1 Spermine        ? ? ? 
1 4 1 MPD             ? ? ? 
1 5 1 H2O             ? ? ? 
1 6 2 'Na Cacodylate' ? ? ? 
1 7 2 CaCl2           ? ? ? 
1 8 2 MPD             ? ? ? 
1 9 2 H2O             ? ? ? 
# 
_diffrn.id                     1 
_diffrn.ambient_temp           103.0 
_diffrn.ambient_temp_details   ? 
_diffrn.crystal_id             1 
# 
_diffrn_detector.diffrn_id              1 
_diffrn_detector.detector               CCD 
_diffrn_detector.type                   'ADSC QUANTUM 4' 
_diffrn_detector.pdbx_collection_date   2004-02-26 
_diffrn_detector.details                ? 
# 
_diffrn_radiation.diffrn_id                        1 
_diffrn_radiation.wavelength_id                    1 
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l   M 
_diffrn_radiation.monochromator                    ? 
_diffrn_radiation.pdbx_diffrn_protocol             'SINGLE WAVELENGTH' 
_diffrn_radiation.pdbx_scattering_type             x-ray 
# 
_diffrn_radiation_wavelength.id           1 
_diffrn_radiation_wavelength.wavelength   0.9795 
_diffrn_radiation_wavelength.wt           1.0 
# 
_diffrn_source.diffrn_id                   1 
_diffrn_source.source                      SYNCHROTRON 
_diffrn_source.type                        'APS BEAMLINE 14-BM-D' 
_diffrn_source.pdbx_synchrotron_site       APS 
_diffrn_source.pdbx_synchrotron_beamline   14-BM-D 
_diffrn_source.pdbx_wavelength             0.9795 
_diffrn_source.pdbx_wavelength_list        ? 
# 
_reflns.entry_id                     1ZF5 
_reflns.observed_criterion_sigma_I   0.000 
_reflns.observed_criterion_sigma_F   ? 
_reflns.d_resolution_low             11.070 
_reflns.d_resolution_high            0.990 
_reflns.number_obs                   12303 
_reflns.number_all                   ? 
_reflns.percent_possible_obs         89.2 
_reflns.pdbx_Rmerge_I_obs            0.033 
_reflns.pdbx_Rsym_value              0.033 
_reflns.pdbx_netI_over_sigmaI        27.4000 
_reflns.B_iso_Wilson_estimate        0.7 
_reflns.pdbx_redundancy              ? 
_reflns.R_free_details               ? 
_reflns.pdbx_chi_squared             ? 
_reflns.pdbx_scaling_rejects         ? 
_reflns.pdbx_diffrn_id               1 
_reflns.pdbx_ordinal                 1 
# 
_reflns_shell.d_res_high             0.99 
_reflns_shell.d_res_low              1.03 
_reflns_shell.percent_possible_all   43.4 
_reflns_shell.Rmerge_I_obs           0.161 
_reflns_shell.pdbx_Rsym_value        0.161 
_reflns_shell.meanI_over_sigI_obs    4.200 
_reflns_shell.pdbx_redundancy        ? 
_reflns_shell.percent_possible_obs   ? 
_reflns_shell.number_unique_all      ? 
_reflns_shell.number_measured_all    ? 
_reflns_shell.number_measured_obs    ? 
_reflns_shell.number_unique_obs      ? 
_reflns_shell.pdbx_chi_squared       ? 
_reflns_shell.pdbx_diffrn_id         ? 
_reflns_shell.pdbx_ordinal           1 
# 
_refine.entry_id                                 1ZF5 
_refine.ls_number_reflns_obs                     12191 
_refine.ls_number_reflns_all                     ? 
_refine.pdbx_ls_sigma_I                          ? 
_refine.pdbx_ls_sigma_F                          0.000 
_refine.pdbx_data_cutoff_high_absF               ? 
_refine.pdbx_data_cutoff_low_absF                ? 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.ls_d_res_low                             11.07 
_refine.ls_d_res_high                            0.99 
_refine.ls_percent_reflns_obs                    88.3 
_refine.ls_R_factor_obs                          ? 
_refine.ls_R_factor_all                          ? 
_refine.ls_R_factor_R_work                       0.29 
_refine.ls_R_factor_R_free                       0.298 
_refine.ls_R_factor_R_free_error                 ? 
_refine.ls_R_factor_R_free_error_details         ? 
_refine.ls_percent_reflns_R_free                 10.300 
_refine.ls_number_reflns_R_free                  1260 
_refine.ls_number_parameters                     ? 
_refine.ls_number_restraints                     ? 
_refine.occupancy_min                            ? 
_refine.occupancy_max                            ? 
_refine.correlation_coeff_Fo_to_Fc               0.825 
_refine.correlation_coeff_Fo_to_Fc_free          0.849 
_refine.B_iso_mean                               3.0 
_refine.aniso_B[1][1]                            -0.35 
_refine.aniso_B[2][2]                            0.31 
_refine.aniso_B[3][3]                            0.04 
_refine.aniso_B[1][2]                            0.00 
_refine.aniso_B[1][3]                            -0.05 
_refine.aniso_B[2][3]                            0.00 
_refine.solvent_model_details                    'FLAT MODEL' 
_refine.solvent_model_param_ksol                 ? 
_refine.solvent_model_param_bsol                 ? 
_refine.pdbx_solvent_vdw_probe_radii             1.20 
_refine.pdbx_solvent_ion_probe_radii             0.80 
_refine.pdbx_solvent_shrinkage_radii             0.80 
_refine.pdbx_ls_cross_valid_method               THROUGHOUT 
_refine.details                                  
'STRUCTURE IS NOT REFINED TO ITS LOWEST R VALUES, REFER TO CITATION. ALTERNATE CONFORMATIONS CLEARLY VISIBLE ALONG DNA BACKBONE.`' 
_refine.pdbx_starting_model                      ? 
_refine.pdbx_method_to_determine_struct          'MOLECULAR REPLACEMENT' 
_refine.pdbx_isotropic_thermal_model             ? 
_refine.pdbx_stereochemistry_target_values       'MAXIMUM LIKELIHOOD' 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.pdbx_R_Free_selection_details            RANDOM 
_refine.pdbx_overall_ESU_R                       0.045 
_refine.pdbx_overall_ESU_R_Free                  0.041 
_refine.overall_SU_ML                            0.030 
_refine.overall_SU_B                             0.529 
_refine.ls_redundancy_reflns_obs                 ? 
_refine.overall_SU_R_Cruickshank_DPI             ? 
_refine.overall_SU_R_free                        ? 
_refine.ls_wR_factor_R_free                      ? 
_refine.ls_wR_factor_R_work                      ? 
_refine.overall_FOM_free_R_set                   ? 
_refine.overall_FOM_work_R_set                   ? 
_refine.pdbx_refine_id                           'X-RAY DIFFRACTION' 
_refine.pdbx_diffrn_id                           1 
_refine.pdbx_TLS_residual_ADP_flag               ? 
_refine.pdbx_overall_phase_error                 ? 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
# 
_refine_analyze.entry_id                        1ZF5 
_refine_analyze.Luzzati_coordinate_error_obs    0.16 
_refine_analyze.Luzzati_d_res_low_obs           5.00 
_refine_analyze.Luzzati_coordinate_error_free   ? 
_refine_analyze.Luzzati_d_res_low_free          ? 
_refine_analyze.Luzzati_sigma_a_obs             -0.08 
_refine_analyze.Luzzati_sigma_a_free            ? 
_refine_analyze.number_disordered_residues      ? 
_refine_analyze.occupancy_sum_non_hydrogen      ? 
_refine_analyze.occupancy_sum_hydrogen          ? 
_refine_analyze.pdbx_refine_id                  'X-RAY DIFFRACTION' 
# 
_refine_hist.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_hist.cycle_id                         LAST 
_refine_hist.pdbx_number_atoms_protein        0 
_refine_hist.pdbx_number_atoms_nucleic_acid   202 
_refine_hist.pdbx_number_atoms_ligand         0 
_refine_hist.number_atoms_solvent             0 
_refine_hist.number_atoms_total               202 
_refine_hist.d_res_high                       0.99 
_refine_hist.d_res_low                        11.07 
# 
loop_
_refine_ls_restr.type 
_refine_ls_restr.dev_ideal 
_refine_ls_restr.dev_ideal_target 
_refine_ls_restr.weight 
_refine_ls_restr.number 
_refine_ls_restr.pdbx_refine_id 
_refine_ls_restr.pdbx_restraint_function 
r_bond_refined_d             0.004 0.021 ? 226 'X-RAY DIFFRACTION' ? 
r_bond_other_d               ?     ?     ? ?   'X-RAY DIFFRACTION' ? 
r_angle_refined_deg          1.000 3.000 ? 347 'X-RAY DIFFRACTION' ? 
r_angle_other_deg            ?     ?     ? ?   'X-RAY DIFFRACTION' ? 
r_dihedral_angle_1_deg       ?     ?     ? ?   'X-RAY DIFFRACTION' ? 
r_dihedral_angle_2_deg       ?     ?     ? ?   'X-RAY DIFFRACTION' ? 
r_dihedral_angle_3_deg       ?     ?     ? ?   'X-RAY DIFFRACTION' ? 
r_dihedral_angle_4_deg       ?     ?     ? ?   'X-RAY DIFFRACTION' ? 
r_chiral_restr               0.065 0.200 ? 39  'X-RAY DIFFRACTION' ? 
r_gen_planes_refined         0.010 0.020 ? 104 'X-RAY DIFFRACTION' ? 
r_gen_planes_other           ?     ?     ? ?   'X-RAY DIFFRACTION' ? 
r_nbd_refined                0.247 0.200 ? 94  'X-RAY DIFFRACTION' ? 
r_nbd_other                  ?     ?     ? ?   'X-RAY DIFFRACTION' ? 
r_nbtor_refined              0.302 0.200 ? 124 'X-RAY DIFFRACTION' ? 
r_nbtor_other                ?     ?     ? ?   'X-RAY DIFFRACTION' ? 
r_xyhbond_nbd_refined        0.231 0.200 ? 82  'X-RAY DIFFRACTION' ? 
r_xyhbond_nbd_other          ?     ?     ? ?   'X-RAY DIFFRACTION' ? 
r_metal_ion_refined          ?     ?     ? ?   'X-RAY DIFFRACTION' ? 
r_metal_ion_other            ?     ?     ? ?   'X-RAY DIFFRACTION' ? 
r_symmetry_vdw_refined       0.143 0.200 ? 25  'X-RAY DIFFRACTION' ? 
r_symmetry_vdw_other         ?     ?     ? ?   'X-RAY DIFFRACTION' ? 
r_symmetry_hbond_refined     0.174 0.200 ? 45  'X-RAY DIFFRACTION' ? 
r_symmetry_hbond_other       ?     ?     ? ?   'X-RAY DIFFRACTION' ? 
r_symmetry_metal_ion_refined ?     ?     ? ?   'X-RAY DIFFRACTION' ? 
r_symmetry_metal_ion_other   ?     ?     ? ?   'X-RAY DIFFRACTION' ? 
r_mcbond_it                  ?     ?     ? ?   'X-RAY DIFFRACTION' ? 
r_mcbond_other               ?     ?     ? ?   'X-RAY DIFFRACTION' ? 
r_mcangle_it                 ?     ?     ? ?   'X-RAY DIFFRACTION' ? 
r_scbond_it                  0.505 3.000 ? 330 'X-RAY DIFFRACTION' ? 
r_scangle_it                 0.842 4.500 ? 347 'X-RAY DIFFRACTION' ? 
r_rigid_bond_restr           ?     ?     ? ?   'X-RAY DIFFRACTION' ? 
r_sphericity_free            ?     ?     ? ?   'X-RAY DIFFRACTION' ? 
r_sphericity_bonded          ?     ?     ? ?   'X-RAY DIFFRACTION' ? 
# 
_refine_ls_shell.pdbx_total_number_of_bins_used   6 
_refine_ls_shell.d_res_high                       0.99 
_refine_ls_shell.d_res_low                        1.05 
_refine_ls_shell.number_reflns_R_work             1008 
_refine_ls_shell.R_factor_R_work                  0.287 
_refine_ls_shell.percent_reflns_obs               48.9 
_refine_ls_shell.R_factor_R_free                  0.306 
_refine_ls_shell.R_factor_R_free_error            ? 
_refine_ls_shell.percent_reflns_R_free            ? 
_refine_ls_shell.number_reflns_R_free             104 
_refine_ls_shell.redundancy_reflns_obs            ? 
_refine_ls_shell.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_ls_shell.number_reflns_all                ? 
_refine_ls_shell.R_factor_all                     ? 
# 
_struct.entry_id                  1ZF5 
_struct.title                     'GCT duplex B-DNA' 
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.text            'Crystallographic Screen, DNA Structure, Holliday Junction, Molecular Structure, DNA' 
_struct_keywords.entry_id        1ZF5 
_struct_keywords.pdbx_keywords   DNA 
# 
_struct_asym.id                            A 
_struct_asym.pdbx_blank_PDB_chainid_flag   N 
_struct_asym.pdbx_modified                 N 
_struct_asym.entity_id                     1 
_struct_asym.details                       ? 
# 
_struct_ref.id                         1 
_struct_ref.entity_id                  1 
_struct_ref.db_name                    PDB 
_struct_ref.db_code                    1ZF5 
_struct_ref.pdbx_db_accession          1ZF5 
_struct_ref.pdbx_db_isoform            ? 
_struct_ref.pdbx_seq_one_letter_code   ? 
_struct_ref.pdbx_align_begin           ? 
# 
_struct_ref_seq.align_id                      1 
_struct_ref_seq.ref_id                        1 
_struct_ref_seq.pdbx_PDB_id_code              1ZF5 
_struct_ref_seq.pdbx_strand_id                A 
_struct_ref_seq.seq_align_beg                 1 
_struct_ref_seq.pdbx_seq_align_beg_ins_code   ? 
_struct_ref_seq.seq_align_end                 10 
_struct_ref_seq.pdbx_seq_align_end_ins_code   ? 
_struct_ref_seq.pdbx_db_accession             1ZF5 
_struct_ref_seq.db_align_beg                  1 
_struct_ref_seq.pdbx_db_align_beg_ins_code    ? 
_struct_ref_seq.db_align_end                  10 
_struct_ref_seq.pdbx_db_align_end_ins_code    ? 
_struct_ref_seq.pdbx_auth_seq_align_beg       1 
_struct_ref_seq.pdbx_auth_seq_align_end       10 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_defined_assembly 
_pdbx_struct_assembly.method_details       ? 
_pdbx_struct_assembly.oligomeric_details   dimeric 
_pdbx_struct_assembly.oligomeric_count     2 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1,2 
_pdbx_struct_assembly_gen.asym_id_list      A 
# 
loop_
_pdbx_struct_oper_list.id 
_pdbx_struct_oper_list.type 
_pdbx_struct_oper_list.name 
_pdbx_struct_oper_list.symmetry_operation 
_pdbx_struct_oper_list.matrix[1][1] 
_pdbx_struct_oper_list.matrix[1][2] 
_pdbx_struct_oper_list.matrix[1][3] 
_pdbx_struct_oper_list.vector[1] 
_pdbx_struct_oper_list.matrix[2][1] 
_pdbx_struct_oper_list.matrix[2][2] 
_pdbx_struct_oper_list.matrix[2][3] 
_pdbx_struct_oper_list.vector[2] 
_pdbx_struct_oper_list.matrix[3][1] 
_pdbx_struct_oper_list.matrix[3][2] 
_pdbx_struct_oper_list.matrix[3][3] 
_pdbx_struct_oper_list.vector[3] 
1 'identity operation'         1_555 x,y,z       1.0000000000  0.0000000000 0.0000000000 0.0000000000  0.0000000000 1.0000000000 
0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000  0.0000000000  
2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1.0000000000 0.0000000000 0.0000000000 16.3648496398 0.0000000000 1.0000000000 
0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 30.4514635008 
# 
_struct_biol.id                    1 
_struct_biol.pdbx_parent_biol_id   ? 
_struct_biol.details               ? 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
hydrog1  hydrog ? ? A DC 1  N3 ? ? ? 1_555 A DG 10 N1 ? ? A DC 1  A DG 10 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog2  hydrog ? ? A DC 1  N4 ? ? ? 1_555 A DG 10 O6 ? ? A DC 1  A DG 10 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog3  hydrog ? ? A DC 1  O2 ? ? ? 1_555 A DG 10 N2 ? ? A DC 1  A DG 10 2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog4  hydrog ? ? A DC 2  N3 ? ? ? 1_555 A DG 9  N1 ? ? A DC 2  A DG 9  2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog5  hydrog ? ? A DC 2  N4 ? ? ? 1_555 A DG 9  O6 ? ? A DC 2  A DG 9  2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog6  hydrog ? ? A DC 2  O2 ? ? ? 1_555 A DG 9  N2 ? ? A DC 2  A DG 9  2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog7  hydrog ? ? A DA 3  N1 ? ? ? 1_555 A DT 8  N3 ? ? A DA 3  A DT 8  2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog8  hydrog ? ? A DA 3  N6 ? ? ? 1_555 A DT 8  O4 ? ? A DA 3  A DT 8  2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog9  hydrog ? ? A DG 4  N1 ? ? ? 1_555 A DC 7  N3 ? ? A DG 4  A DC 7  2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog10 hydrog ? ? A DG 4  N2 ? ? ? 1_555 A DC 7  O2 ? ? A DG 4  A DC 7  2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog11 hydrog ? ? A DG 4  O6 ? ? ? 1_555 A DC 7  N4 ? ? A DG 4  A DC 7  2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog12 hydrog ? ? A DC 5  N3 ? ? ? 1_555 A DG 6  N1 ? ? A DC 5  A DG 6  2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog13 hydrog ? ? A DC 5  N4 ? ? ? 1_555 A DG 6  O6 ? ? A DC 5  A DG 6  2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog14 hydrog ? ? A DC 5  O2 ? ? ? 1_555 A DG 6  N2 ? ? A DC 5  A DG 6  2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog15 hydrog ? ? A DG 6  N1 ? ? ? 1_555 A DC 5  N3 ? ? A DG 6  A DC 5  2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog16 hydrog ? ? A DG 6  N2 ? ? ? 1_555 A DC 5  O2 ? ? A DG 6  A DC 5  2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog17 hydrog ? ? A DG 6  O6 ? ? ? 1_555 A DC 5  N4 ? ? A DG 6  A DC 5  2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog18 hydrog ? ? A DC 7  N3 ? ? ? 1_555 A DG 4  N1 ? ? A DC 7  A DG 4  2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog19 hydrog ? ? A DC 7  N4 ? ? ? 1_555 A DG 4  O6 ? ? A DC 7  A DG 4  2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog20 hydrog ? ? A DC 7  O2 ? ? ? 1_555 A DG 4  N2 ? ? A DC 7  A DG 4  2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog21 hydrog ? ? A DT 8  N3 ? ? ? 1_555 A DA 3  N1 ? ? A DT 8  A DA 3  2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog22 hydrog ? ? A DT 8  O4 ? ? ? 1_555 A DA 3  N6 ? ? A DT 8  A DA 3  2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog23 hydrog ? ? A DG 9  N1 ? ? ? 1_555 A DC 2  N3 ? ? A DG 9  A DC 2  2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog24 hydrog ? ? A DG 9  N2 ? ? ? 1_555 A DC 2  O2 ? ? A DG 9  A DC 2  2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog25 hydrog ? ? A DG 9  O6 ? ? ? 1_555 A DC 2  N4 ? ? A DG 9  A DC 2  2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog26 hydrog ? ? A DG 10 N1 ? ? ? 1_555 A DC 1  N3 ? ? A DG 10 A DC 1  2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog27 hydrog ? ? A DG 10 N2 ? ? ? 1_555 A DC 1  O2 ? ? A DG 10 A DC 1  2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
hydrog28 hydrog ? ? A DG 10 O6 ? ? ? 1_555 A DC 1  N4 ? ? A DG 10 A DC 1  2_656 ? ? ? ? ? ? WATSON-CRICK ? ? ? 
# 
_struct_conn_type.id          hydrog 
_struct_conn_type.criteria    ? 
_struct_conn_type.reference   ? 
# 
loop_
_pdbx_validate_planes.id 
_pdbx_validate_planes.PDB_model_num 
_pdbx_validate_planes.auth_comp_id 
_pdbx_validate_planes.auth_asym_id 
_pdbx_validate_planes.auth_seq_id 
_pdbx_validate_planes.PDB_ins_code 
_pdbx_validate_planes.label_alt_id 
_pdbx_validate_planes.rmsd 
_pdbx_validate_planes.type 
1 1 DA A 3 ? ? 0.054 'SIDE CHAIN' 
2 1 DG A 6 ? ? 0.051 'SIDE CHAIN' 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
DA OP3    O N N 1   
DA P      P N N 2   
DA OP1    O N N 3   
DA OP2    O N N 4   
DA "O5'"  O N N 5   
DA "C5'"  C N N 6   
DA "C4'"  C N R 7   
DA "O4'"  O N N 8   
DA "C3'"  C N S 9   
DA "O3'"  O N N 10  
DA "C2'"  C N N 11  
DA "C1'"  C N R 12  
DA N9     N Y N 13  
DA C8     C Y N 14  
DA N7     N Y N 15  
DA C5     C Y N 16  
DA C6     C Y N 17  
DA N6     N N N 18  
DA N1     N Y N 19  
DA C2     C Y N 20  
DA N3     N Y N 21  
DA C4     C Y N 22  
DA HOP3   H N N 23  
DA HOP2   H N N 24  
DA "H5'"  H N N 25  
DA "H5''" H N N 26  
DA "H4'"  H N N 27  
DA "H3'"  H N N 28  
DA "HO3'" H N N 29  
DA "H2'"  H N N 30  
DA "H2''" H N N 31  
DA "H1'"  H N N 32  
DA H8     H N N 33  
DA H61    H N N 34  
DA H62    H N N 35  
DA H2     H N N 36  
DC OP3    O N N 37  
DC P      P N N 38  
DC OP1    O N N 39  
DC OP2    O N N 40  
DC "O5'"  O N N 41  
DC "C5'"  C N N 42  
DC "C4'"  C N R 43  
DC "O4'"  O N N 44  
DC "C3'"  C N S 45  
DC "O3'"  O N N 46  
DC "C2'"  C N N 47  
DC "C1'"  C N R 48  
DC N1     N N N 49  
DC C2     C N N 50  
DC O2     O N N 51  
DC N3     N N N 52  
DC C4     C N N 53  
DC N4     N N N 54  
DC C5     C N N 55  
DC C6     C N N 56  
DC HOP3   H N N 57  
DC HOP2   H N N 58  
DC "H5'"  H N N 59  
DC "H5''" H N N 60  
DC "H4'"  H N N 61  
DC "H3'"  H N N 62  
DC "HO3'" H N N 63  
DC "H2'"  H N N 64  
DC "H2''" H N N 65  
DC "H1'"  H N N 66  
DC H41    H N N 67  
DC H42    H N N 68  
DC H5     H N N 69  
DC H6     H N N 70  
DG OP3    O N N 71  
DG P      P N N 72  
DG OP1    O N N 73  
DG OP2    O N N 74  
DG "O5'"  O N N 75  
DG "C5'"  C N N 76  
DG "C4'"  C N R 77  
DG "O4'"  O N N 78  
DG "C3'"  C N S 79  
DG "O3'"  O N N 80  
DG "C2'"  C N N 81  
DG "C1'"  C N R 82  
DG N9     N Y N 83  
DG C8     C Y N 84  
DG N7     N Y N 85  
DG C5     C Y N 86  
DG C6     C N N 87  
DG O6     O N N 88  
DG N1     N N N 89  
DG C2     C N N 90  
DG N2     N N N 91  
DG N3     N N N 92  
DG C4     C Y N 93  
DG HOP3   H N N 94  
DG HOP2   H N N 95  
DG "H5'"  H N N 96  
DG "H5''" H N N 97  
DG "H4'"  H N N 98  
DG "H3'"  H N N 99  
DG "HO3'" H N N 100 
DG "H2'"  H N N 101 
DG "H2''" H N N 102 
DG "H1'"  H N N 103 
DG H8     H N N 104 
DG H1     H N N 105 
DG H21    H N N 106 
DG H22    H N N 107 
DT OP3    O N N 108 
DT P      P N N 109 
DT OP1    O N N 110 
DT OP2    O N N 111 
DT "O5'"  O N N 112 
DT "C5'"  C N N 113 
DT "C4'"  C N R 114 
DT "O4'"  O N N 115 
DT "C3'"  C N S 116 
DT "O3'"  O N N 117 
DT "C2'"  C N N 118 
DT "C1'"  C N R 119 
DT N1     N N N 120 
DT C2     C N N 121 
DT O2     O N N 122 
DT N3     N N N 123 
DT C4     C N N 124 
DT O4     O N N 125 
DT C5     C N N 126 
DT C7     C N N 127 
DT C6     C N N 128 
DT HOP3   H N N 129 
DT HOP2   H N N 130 
DT "H5'"  H N N 131 
DT "H5''" H N N 132 
DT "H4'"  H N N 133 
DT "H3'"  H N N 134 
DT "HO3'" H N N 135 
DT "H2'"  H N N 136 
DT "H2''" H N N 137 
DT "H1'"  H N N 138 
DT H3     H N N 139 
DT H71    H N N 140 
DT H72    H N N 141 
DT H73    H N N 142 
DT H6     H N N 143 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
DA OP3   P      sing N N 1   
DA OP3   HOP3   sing N N 2   
DA P     OP1    doub N N 3   
DA P     OP2    sing N N 4   
DA P     "O5'"  sing N N 5   
DA OP2   HOP2   sing N N 6   
DA "O5'" "C5'"  sing N N 7   
DA "C5'" "C4'"  sing N N 8   
DA "C5'" "H5'"  sing N N 9   
DA "C5'" "H5''" sing N N 10  
DA "C4'" "O4'"  sing N N 11  
DA "C4'" "C3'"  sing N N 12  
DA "C4'" "H4'"  sing N N 13  
DA "O4'" "C1'"  sing N N 14  
DA "C3'" "O3'"  sing N N 15  
DA "C3'" "C2'"  sing N N 16  
DA "C3'" "H3'"  sing N N 17  
DA "O3'" "HO3'" sing N N 18  
DA "C2'" "C1'"  sing N N 19  
DA "C2'" "H2'"  sing N N 20  
DA "C2'" "H2''" sing N N 21  
DA "C1'" N9     sing N N 22  
DA "C1'" "H1'"  sing N N 23  
DA N9    C8     sing Y N 24  
DA N9    C4     sing Y N 25  
DA C8    N7     doub Y N 26  
DA C8    H8     sing N N 27  
DA N7    C5     sing Y N 28  
DA C5    C6     sing Y N 29  
DA C5    C4     doub Y N 30  
DA C6    N6     sing N N 31  
DA C6    N1     doub Y N 32  
DA N6    H61    sing N N 33  
DA N6    H62    sing N N 34  
DA N1    C2     sing Y N 35  
DA C2    N3     doub Y N 36  
DA C2    H2     sing N N 37  
DA N3    C4     sing Y N 38  
DC OP3   P      sing N N 39  
DC OP3   HOP3   sing N N 40  
DC P     OP1    doub N N 41  
DC P     OP2    sing N N 42  
DC P     "O5'"  sing N N 43  
DC OP2   HOP2   sing N N 44  
DC "O5'" "C5'"  sing N N 45  
DC "C5'" "C4'"  sing N N 46  
DC "C5'" "H5'"  sing N N 47  
DC "C5'" "H5''" sing N N 48  
DC "C4'" "O4'"  sing N N 49  
DC "C4'" "C3'"  sing N N 50  
DC "C4'" "H4'"  sing N N 51  
DC "O4'" "C1'"  sing N N 52  
DC "C3'" "O3'"  sing N N 53  
DC "C3'" "C2'"  sing N N 54  
DC "C3'" "H3'"  sing N N 55  
DC "O3'" "HO3'" sing N N 56  
DC "C2'" "C1'"  sing N N 57  
DC "C2'" "H2'"  sing N N 58  
DC "C2'" "H2''" sing N N 59  
DC "C1'" N1     sing N N 60  
DC "C1'" "H1'"  sing N N 61  
DC N1    C2     sing N N 62  
DC N1    C6     sing N N 63  
DC C2    O2     doub N N 64  
DC C2    N3     sing N N 65  
DC N3    C4     doub N N 66  
DC C4    N4     sing N N 67  
DC C4    C5     sing N N 68  
DC N4    H41    sing N N 69  
DC N4    H42    sing N N 70  
DC C5    C6     doub N N 71  
DC C5    H5     sing N N 72  
DC C6    H6     sing N N 73  
DG OP3   P      sing N N 74  
DG OP3   HOP3   sing N N 75  
DG P     OP1    doub N N 76  
DG P     OP2    sing N N 77  
DG P     "O5'"  sing N N 78  
DG OP2   HOP2   sing N N 79  
DG "O5'" "C5'"  sing N N 80  
DG "C5'" "C4'"  sing N N 81  
DG "C5'" "H5'"  sing N N 82  
DG "C5'" "H5''" sing N N 83  
DG "C4'" "O4'"  sing N N 84  
DG "C4'" "C3'"  sing N N 85  
DG "C4'" "H4'"  sing N N 86  
DG "O4'" "C1'"  sing N N 87  
DG "C3'" "O3'"  sing N N 88  
DG "C3'" "C2'"  sing N N 89  
DG "C3'" "H3'"  sing N N 90  
DG "O3'" "HO3'" sing N N 91  
DG "C2'" "C1'"  sing N N 92  
DG "C2'" "H2'"  sing N N 93  
DG "C2'" "H2''" sing N N 94  
DG "C1'" N9     sing N N 95  
DG "C1'" "H1'"  sing N N 96  
DG N9    C8     sing Y N 97  
DG N9    C4     sing Y N 98  
DG C8    N7     doub Y N 99  
DG C8    H8     sing N N 100 
DG N7    C5     sing Y N 101 
DG C5    C6     sing N N 102 
DG C5    C4     doub Y N 103 
DG C6    O6     doub N N 104 
DG C6    N1     sing N N 105 
DG N1    C2     sing N N 106 
DG N1    H1     sing N N 107 
DG C2    N2     sing N N 108 
DG C2    N3     doub N N 109 
DG N2    H21    sing N N 110 
DG N2    H22    sing N N 111 
DG N3    C4     sing N N 112 
DT OP3   P      sing N N 113 
DT OP3   HOP3   sing N N 114 
DT P     OP1    doub N N 115 
DT P     OP2    sing N N 116 
DT P     "O5'"  sing N N 117 
DT OP2   HOP2   sing N N 118 
DT "O5'" "C5'"  sing N N 119 
DT "C5'" "C4'"  sing N N 120 
DT "C5'" "H5'"  sing N N 121 
DT "C5'" "H5''" sing N N 122 
DT "C4'" "O4'"  sing N N 123 
DT "C4'" "C3'"  sing N N 124 
DT "C4'" "H4'"  sing N N 125 
DT "O4'" "C1'"  sing N N 126 
DT "C3'" "O3'"  sing N N 127 
DT "C3'" "C2'"  sing N N 128 
DT "C3'" "H3'"  sing N N 129 
DT "O3'" "HO3'" sing N N 130 
DT "C2'" "C1'"  sing N N 131 
DT "C2'" "H2'"  sing N N 132 
DT "C2'" "H2''" sing N N 133 
DT "C1'" N1     sing N N 134 
DT "C1'" "H1'"  sing N N 135 
DT N1    C2     sing N N 136 
DT N1    C6     sing N N 137 
DT C2    O2     doub N N 138 
DT C2    N3     sing N N 139 
DT N3    C4     sing N N 140 
DT N3    H3     sing N N 141 
DT C4    O4     doub N N 142 
DT C4    C5     sing N N 143 
DT C5    C7     sing N N 144 
DT C5    C6     doub N N 145 
DT C7    H71    sing N N 146 
DT C7    H72    sing N N 147 
DT C7    H73    sing N N 148 
DT C6    H6     sing N N 149 
# 
loop_
_ndb_struct_conf_na.entry_id 
_ndb_struct_conf_na.feature 
1ZF5 'double helix'        
1ZF5 'b-form double helix' 
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 A DC 1  1_555 A DG 10 2_656 0.057  -0.096 0.027  -7.886  -15.253 -1.899 1  A_DC1:DG10_A A 1  ? A 10 ? 19 1 
1 A DC 2  1_555 A DG 9  2_656 0.399  -0.162 0.208  -0.421  -13.091 0.290  2  A_DC2:DG9_A  A 2  ? A 9  ? 19 1 
1 A DA 3  1_555 A DT 8  2_656 -0.010 -0.142 0.171  -0.764  -7.702  0.552  3  A_DA3:DT8_A  A 3  ? A 8  ? 20 1 
1 A DG 4  1_555 A DC 7  2_656 0.002  -0.034 0.393  14.046  -4.847  -0.410 4  A_DG4:DC7_A  A 4  ? A 7  ? 19 1 
1 A DC 5  1_555 A DG 6  2_656 0.249  -0.077 -0.116 18.068  -15.701 -0.221 5  A_DC5:DG6_A  A 5  ? A 6  ? 19 1 
1 A DG 6  1_555 A DC 5  2_656 -0.249 -0.077 -0.116 -18.068 -15.701 -0.221 6  A_DG6:DC5_A  A 6  ? A 5  ? 19 1 
1 A DC 7  1_555 A DG 4  2_656 -0.002 -0.034 0.393  -14.046 -4.847  -0.409 7  A_DC7:DG4_A  A 7  ? A 4  ? 19 1 
1 A DT 8  1_555 A DA 3  2_656 0.010  -0.142 0.171  0.764   -7.702  0.552  8  A_DT8:DA3_A  A 8  ? A 3  ? 20 1 
1 A DG 9  1_555 A DC 2  2_656 -0.399 -0.162 0.208  0.421   -13.091 0.290  9  A_DG9:DC2_A  A 9  ? A 2  ? 19 1 
1 A DG 10 1_555 A DC 1  2_656 -0.057 -0.096 0.027  7.886   -15.253 -1.899 10 A_DG10:DC1_A A 10 ? A 1  ? 19 1 
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 A DC 1 1_555 A DG 10 2_656 A DC 2  1_555 A DG 9 2_656 -0.452 0.730  3.272 2.640  8.498  29.826 -0.309 1.361  3.299 16.065  
-4.991 31.096 1 AA_DC1DC2:DG9DG10_AA A 1 ? A 10 ? A 2  ? A 9 ? 
1 A DC 2 1_555 A DG 9  2_656 A DA 3  1_555 A DT 8 2_656 0.134  2.817  3.288 -0.353 -9.155 49.702 3.909  -0.181 2.761 -10.786 0.416 
50.487 2 AA_DC2DA3:DT8DG9_AA  A 2 ? A 9  ? A 3  ? A 8 ? 
1 A DA 3 1_555 A DT 8  2_656 A DG 4  1_555 A DC 7 2_656 0.720  0.720  3.016 -3.383 9.957  22.070 -1.266 -2.710 2.921 24.313  8.261 
24.419 3 AA_DA3DG4:DC7DT8_AA  A 3 ? A 8  ? A 4  ? A 7 ? 
1 A DG 4 1_555 A DC 7  2_656 A DC 5  1_555 A DG 6 2_656 -0.511 0.550  3.210 3.219  -2.835 37.525 1.204  1.193  3.109 -4.389  
-4.984 37.760 4 AA_DG4DC5:DG6DC7_AA  A 4 ? A 7  ? A 5  ? A 6 ? 
1 A DC 5 1_555 A DG 6  2_656 A DG 6  1_555 A DC 5 2_656 0.000  -0.310 3.984 0.000  7.884  44.081 -1.278 0.000  3.876 10.405  0.000 
44.746 5 AA_DC5DG6:DC5DG6_AA  A 5 ? A 6  ? A 6  ? A 5 ? 
1 A DG 6 1_555 A DC 5  2_656 A DC 7  1_555 A DG 4 2_656 0.511  0.550  3.210 -3.219 -2.835 37.525 1.204  -1.193 3.109 -4.389  4.984 
37.760 6 AA_DG6DC7:DG4DC5_AA  A 6 ? A 5  ? A 7  ? A 4 ? 
1 A DC 7 1_555 A DG 4  2_656 A DT 8  1_555 A DA 3 2_656 -0.720 0.720  3.016 3.383  9.957  22.070 -1.266 2.710  2.921 24.313  
-8.261 24.419 7 AA_DC7DT8:DA3DG4_AA  A 7 ? A 4  ? A 8  ? A 3 ? 
1 A DT 8 1_555 A DA 3  2_656 A DG 9  1_555 A DC 2 2_656 -0.134 2.817  3.288 0.353  -9.155 49.702 3.909  0.181  2.761 -10.786 
-0.416 50.487 8 AA_DT8DG9:DC2DA3_AA  A 8 ? A 3  ? A 9  ? A 2 ? 
1 A DG 9 1_555 A DC 2  2_656 A DG 10 1_555 A DC 1 2_656 0.452  0.730  3.272 -2.640 8.498  29.826 -0.309 -1.361 3.299 16.065  4.991 
31.096 9 AA_DG9DG10:DC1DC2_AA A 9 ? A 2  ? A 10 ? A 1 ? 
# 
_atom_sites.entry_id                    1ZF5 
_atom_sites.fract_transf_matrix[1][1]   0.031559 
_atom_sites.fract_transf_matrix[1][2]   0.000000 
_atom_sites.fract_transf_matrix[1][3]   0.015879 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   0.038879 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   0.032839 
_atom_sites.fract_transf_vector[1]      0.00000 
_atom_sites.fract_transf_vector[2]      0.00000 
_atom_sites.fract_transf_vector[3]      0.00000 
# 
loop_
_atom_type.symbol 
C 
N 
O 
P 
# 
loop_
_atom_site.group_PDB 
_atom_site.id 
_atom_site.type_symbol 
_atom_site.label_atom_id 
_atom_site.label_alt_id 
_atom_site.label_comp_id 
_atom_site.label_asym_id 
_atom_site.label_entity_id 
_atom_site.label_seq_id 
_atom_site.pdbx_PDB_ins_code 
_atom_site.Cartn_x 
_atom_site.Cartn_y 
_atom_site.Cartn_z 
_atom_site.occupancy 
_atom_site.B_iso_or_equiv 
_atom_site.pdbx_formal_charge 
_atom_site.auth_seq_id 
_atom_site.auth_comp_id 
_atom_site.auth_asym_id 
_atom_site.auth_atom_id 
_atom_site.pdbx_PDB_model_num 
ATOM 1   O "O5'" . DC A 1 1  ? 23.201 14.168 3.362  1.00 7.27 ? 1  DC A "O5'" 1 
ATOM 2   C "C5'" . DC A 1 1  ? 22.037 14.325 4.185  1.00 6.52 ? 1  DC A "C5'" 1 
ATOM 3   C "C4'" . DC A 1 1  ? 20.904 14.978 3.427  1.00 5.71 ? 1  DC A "C4'" 1 
ATOM 4   O "O4'" . DC A 1 1  ? 20.179 13.986 2.662  1.00 5.49 ? 1  DC A "O4'" 1 
ATOM 5   C "C3'" . DC A 1 1  ? 19.862 15.691 4.285  1.00 5.03 ? 1  DC A "C3'" 1 
ATOM 6   O "O3'" . DC A 1 1  ? 19.491 16.891 3.618  1.00 4.64 ? 1  DC A "O3'" 1 
ATOM 7   C "C2'" . DC A 1 1  ? 18.687 14.729 4.307  1.00 4.74 ? 1  DC A "C2'" 1 
ATOM 8   C "C1'" . DC A 1 1  ? 18.791 14.056 2.951  1.00 4.46 ? 1  DC A "C1'" 1 
ATOM 9   N N1    . DC A 1 1  ? 18.270 12.683 2.920  1.00 4.02 ? 1  DC A N1    1 
ATOM 10  C C2    . DC A 1 1  ? 17.040 12.432 2.303  1.00 3.72 ? 1  DC A C2    1 
ATOM 11  O O2    . DC A 1 1  ? 16.400 13.382 1.824  1.00 3.78 ? 1  DC A O2    1 
ATOM 12  N N3    . DC A 1 1  ? 16.580 11.160 2.247  1.00 3.34 ? 1  DC A N3    1 
ATOM 13  C C4    . DC A 1 1  ? 17.291 10.169 2.788  1.00 3.55 ? 1  DC A C4    1 
ATOM 14  N N4    . DC A 1 1  ? 16.799 8.931  2.708  1.00 3.27 ? 1  DC A N4    1 
ATOM 15  C C5    . DC A 1 1  ? 18.539 10.402 3.437  1.00 3.63 ? 1  DC A C5    1 
ATOM 16  C C6    . DC A 1 1  ? 18.985 11.660 3.478  1.00 4.03 ? 1  DC A C6    1 
ATOM 17  P P     . DC A 1 2  ? 19.197 18.218 4.461  1.00 3.83 ? 2  DC A P     1 
ATOM 18  O OP1   . DC A 1 2  ? 19.268 19.326 3.477  1.00 4.54 ? 2  DC A OP1   1 
ATOM 19  O OP2   . DC A 1 2  ? 20.065 18.240 5.664  1.00 4.58 ? 2  DC A OP2   1 
ATOM 20  O "O5'" . DC A 1 2  ? 17.690 18.032 4.930  1.00 3.70 ? 2  DC A "O5'" 1 
ATOM 21  C "C5'" . DC A 1 2  ? 16.629 18.402 4.060  1.00 3.01 ? 2  DC A "C5'" 1 
ATOM 22  C "C4'" . DC A 1 2  ? 15.302 17.976 4.637  1.00 2.39 ? 2  DC A "C4'" 1 
ATOM 23  O "O4'" . DC A 1 2  ? 15.170 16.539 4.570  1.00 1.70 ? 2  DC A "O4'" 1 
ATOM 24  C "C3'" . DC A 1 2  ? 15.067 18.355 6.102  1.00 1.97 ? 2  DC A "C3'" 1 
ATOM 25  O "O3'" . DC A 1 2  ? 13.706 18.755 6.252  1.00 2.13 ? 2  DC A "O3'" 1 
ATOM 26  C "C2'" . DC A 1 2  ? 15.260 17.037 6.832  1.00 1.92 ? 2  DC A "C2'" 1 
ATOM 27  C "C1'" . DC A 1 2  ? 14.672 16.086 5.812  1.00 1.72 ? 2  DC A "C1'" 1 
ATOM 28  N N1    . DC A 1 2  ? 15.002 14.661 5.935  1.00 1.41 ? 2  DC A N1    1 
ATOM 29  C C2    . DC A 1 2  ? 14.148 13.743 5.332  1.00 1.52 ? 2  DC A C2    1 
ATOM 30  O O2    . DC A 1 2  ? 13.131 14.166 4.761  1.00 1.59 ? 2  DC A O2    1 
ATOM 31  N N3    . DC A 1 2  ? 14.442 12.424 5.384  1.00 1.52 ? 2  DC A N3    1 
ATOM 32  C C4    . DC A 1 2  ? 15.540 12.012 6.019  1.00 1.85 ? 2  DC A C4    1 
ATOM 33  N N4    . DC A 1 2  ? 15.799 10.702 6.022  1.00 1.83 ? 2  DC A N4    1 
ATOM 34  C C5    . DC A 1 2  ? 16.423 12.927 6.671  1.00 1.77 ? 2  DC A C5    1 
ATOM 35  C C6    . DC A 1 2  ? 16.117 14.233 6.604  1.00 1.66 ? 2  DC A C6    1 
ATOM 36  P P     . DA A 1 3  ? 13.321 20.308 6.212  1.00 1.96 ? 3  DA A P     1 
ATOM 37  O OP1   . DA A 1 3  ? 14.072 20.898 5.073  1.00 2.25 ? 3  DA A OP1   1 
ATOM 38  O OP2   . DA A 1 3  ? 13.482 20.873 7.572  1.00 2.69 ? 3  DA A OP2   1 
ATOM 39  O "O5'" . DA A 1 3  ? 11.771 20.281 5.858  1.00 2.40 ? 3  DA A "O5'" 1 
ATOM 40  C "C5'" . DA A 1 3  ? 11.331 19.975 4.540  1.00 1.67 ? 3  DA A "C5'" 1 
ATOM 41  C "C4'" . DA A 1 3  ? 10.043 19.187 4.591  1.00 1.79 ? 3  DA A "C4'" 1 
ATOM 42  O "O4'" . DA A 1 3  ? 10.292 17.862 5.110  1.00 1.29 ? 3  DA A "O4'" 1 
ATOM 43  C "C3'" . DA A 1 3  ? 8.952  19.782 5.476  1.00 1.66 ? 3  DA A "C3'" 1 
ATOM 44  O "O3'" . DA A 1 3  ? 7.690  19.498 4.870  1.00 1.64 ? 3  DA A "O3'" 1 
ATOM 45  C "C2'" . DA A 1 3  ? 9.121  19.032 6.789  1.00 1.40 ? 3  DA A "C2'" 1 
ATOM 46  C "C1'" . DA A 1 3  ? 9.604  17.658 6.339  1.00 1.49 ? 3  DA A "C1'" 1 
ATOM 47  N N9    . DA A 1 3  ? 10.550 16.993 7.232  1.00 1.46 ? 3  DA A N9    1 
ATOM 48  C C8    . DA A 1 3  ? 11.439 17.558 8.113  1.00 1.43 ? 3  DA A C8    1 
ATOM 49  N N7    . DA A 1 3  ? 12.247 16.692 8.671  1.00 1.75 ? 3  DA A N7    1 
ATOM 50  C C5    . DA A 1 3  ? 11.845 15.473 8.144  1.00 1.66 ? 3  DA A C5    1 
ATOM 51  C C6    . DA A 1 3  ? 12.324 14.163 8.323  1.00 1.64 ? 3  DA A C6    1 
ATOM 52  N N6    . DA A 1 3  ? 13.373 13.862 9.090  1.00 2.03 ? 3  DA A N6    1 
ATOM 53  N N1    . DA A 1 3  ? 11.688 13.168 7.667  1.00 1.66 ? 3  DA A N1    1 
ATOM 54  C C2    . DA A 1 3  ? 10.655 13.482 6.875  1.00 1.79 ? 3  DA A C2    1 
ATOM 55  N N3    . DA A 1 3  ? 10.127 14.677 6.611  1.00 1.55 ? 3  DA A N3    1 
ATOM 56  C C4    . DA A 1 3  ? 10.777 15.641 7.285  1.00 1.51 ? 3  DA A C4    1 
ATOM 57  P P     . DG A 1 4  ? 6.363  20.227 5.394  1.00 1.19 ? 4  DG A P     1 
ATOM 58  O OP1   . DG A 1 4  ? 5.407  20.203 4.257  1.00 1.61 ? 4  DG A OP1   1 
ATOM 59  O OP2   . DG A 1 4  ? 6.702  21.518 6.042  1.00 2.11 ? 4  DG A OP2   1 
ATOM 60  O "O5'" . DG A 1 4  ? 5.829  19.255 6.530  1.00 1.68 ? 4  DG A "O5'" 1 
ATOM 61  C "C5'" . DG A 1 4  ? 5.363  17.956 6.202  1.00 2.43 ? 4  DG A "C5'" 1 
ATOM 62  C "C4'" . DG A 1 4  ? 5.184  17.139 7.457  1.00 2.62 ? 4  DG A "C4'" 1 
ATOM 63  O "O4'" . DG A 1 4  ? 6.465  16.711 7.979  1.00 2.51 ? 4  DG A "O4'" 1 
ATOM 64  C "C3'" . DG A 1 4  ? 4.483  17.876 8.604  1.00 2.95 ? 4  DG A "C3'" 1 
ATOM 65  O "O3'" . DG A 1 4  ? 3.575  16.981 9.238  1.00 3.56 ? 4  DG A "O3'" 1 
ATOM 66  C "C2'" . DG A 1 4  ? 5.616  18.149 9.577  1.00 2.59 ? 4  DG A "C2'" 1 
ATOM 67  C "C1'" . DG A 1 4  ? 6.410  16.880 9.378  1.00 2.24 ? 4  DG A "C1'" 1 
ATOM 68  N N9    . DG A 1 4  ? 7.759  16.808 9.929  1.00 2.19 ? 4  DG A N9    1 
ATOM 69  C C8    . DG A 1 4  ? 8.540  17.825 10.423 1.00 2.36 ? 4  DG A C8    1 
ATOM 70  N N7    . DG A 1 4  ? 9.676  17.404 10.914 1.00 2.33 ? 4  DG A N7    1 
ATOM 71  C C5    . DG A 1 4  ? 9.645  16.029 10.718 1.00 2.20 ? 4  DG A C5    1 
ATOM 72  C C6    . DG A 1 4  ? 10.593 15.021 11.057 1.00 2.29 ? 4  DG A C6    1 
ATOM 73  O O6    . DG A 1 4  ? 11.691 15.147 11.617 1.00 2.36 ? 4  DG A O6    1 
ATOM 74  N N1    . DG A 1 4  ? 10.153 13.758 10.672 1.00 2.25 ? 4  DG A N1    1 
ATOM 75  C C2    . DG A 1 4  ? 8.962  13.496 10.040 1.00 2.20 ? 4  DG A C2    1 
ATOM 76  N N2    . DG A 1 4  ? 8.719  12.216 9.743  1.00 2.24 ? 4  DG A N2    1 
ATOM 77  N N3    . DG A 1 4  ? 8.076  14.422 9.723  1.00 2.02 ? 4  DG A N3    1 
ATOM 78  C C4    . DG A 1 4  ? 8.478  15.653 10.092 1.00 2.11 ? 4  DG A C4    1 
ATOM 79  P P     . DC A 1 5  ? 1.998  17.157 9.021  1.00 3.81 ? 5  DC A P     1 
ATOM 80  O OP1   . DC A 1 5  ? 1.778  17.389 7.572  1.00 4.44 ? 5  DC A OP1   1 
ATOM 81  O OP2   . DC A 1 5  ? 1.495  18.152 10.003 1.00 4.80 ? 5  DC A OP2   1 
ATOM 82  O "O5'" . DC A 1 5  ? 1.426  15.725 9.419  1.00 4.52 ? 5  DC A "O5'" 1 
ATOM 83  C "C5'" . DC A 1 5  ? 1.602  14.610 8.552  1.00 5.04 ? 5  DC A "C5'" 1 
ATOM 84  C "C4'" . DC A 1 5  ? 2.075  13.398 9.324  1.00 5.35 ? 5  DC A "C4'" 1 
ATOM 85  O "O4'" . DC A 1 5  ? 3.444  13.584 9.772  1.00 4.72 ? 5  DC A "O4'" 1 
ATOM 86  C "C3'" . DC A 1 5  ? 1.260  13.018 10.568 1.00 5.55 ? 5  DC A "C3'" 1 
ATOM 87  O "O3'" . DC A 1 5  ? 1.070  11.596 10.595 1.00 6.72 ? 5  DC A "O3'" 1 
ATOM 88  C "C2'" . DC A 1 5  ? 2.154  13.450 11.715 1.00 4.96 ? 5  DC A "C2'" 1 
ATOM 89  C "C1'" . DC A 1 5  ? 3.536  13.211 11.138 1.00 4.20 ? 5  DC A "C1'" 1 
ATOM 90  N N1    . DC A 1 5  ? 4.625  13.984 11.762 1.00 3.59 ? 5  DC A N1    1 
ATOM 91  C C2    . DC A 1 5  ? 5.832  13.331 12.048 1.00 3.43 ? 5  DC A C2    1 
ATOM 92  O O2    . DC A 1 5  ? 5.949  12.136 11.748 1.00 3.58 ? 5  DC A O2    1 
ATOM 93  N N3    . DC A 1 5  ? 6.836  14.020 12.639 1.00 3.27 ? 5  DC A N3    1 
ATOM 94  C C4    . DC A 1 5  ? 6.675  15.311 12.934 1.00 3.25 ? 5  DC A C4    1 
ATOM 95  N N4    . DC A 1 5  ? 7.699  15.950 13.510 1.00 3.24 ? 5  DC A N4    1 
ATOM 96  C C5    . DC A 1 5  ? 5.460  16.003 12.651 1.00 3.34 ? 5  DC A C5    1 
ATOM 97  C C6    . DC A 1 5  ? 4.470  15.308 12.068 1.00 3.42 ? 5  DC A C6    1 
ATOM 98  P P     . DG A 1 6  ? 0.355  10.881 11.858 1.00 6.97 ? 6  DG A P     1 
ATOM 99  O OP1   . DG A 1 6  ? -0.668 9.967  11.301 1.00 7.08 ? 6  DG A OP1   1 
ATOM 100 O OP2   . DG A 1 6  ? -0.033 11.874 12.891 1.00 7.16 ? 6  DG A OP2   1 
ATOM 101 O "O5'" . DG A 1 6  ? 1.524  9.965  12.446 1.00 6.82 ? 6  DG A "O5'" 1 
ATOM 102 C "C5'" . DG A 1 6  ? 2.301  9.148  11.566 1.00 6.39 ? 6  DG A "C5'" 1 
ATOM 103 C "C4'" . DG A 1 6  ? 3.317  8.323  12.328 1.00 6.02 ? 6  DG A "C4'" 1 
ATOM 104 O "O4'" . DG A 1 6  ? 4.368  9.161  12.859 1.00 5.67 ? 6  DG A "O4'" 1 
ATOM 105 C "C3'" . DG A 1 6  ? 2.779  7.523  13.509 1.00 6.10 ? 6  DG A "C3'" 1 
ATOM 106 O "O3'" . DG A 1 6  ? 3.434  6.245  13.573 1.00 6.86 ? 6  DG A "O3'" 1 
ATOM 107 C "C2'" . DG A 1 6  ? 3.110  8.405  14.702 1.00 5.64 ? 6  DG A "C2'" 1 
ATOM 108 C "C1'" . DG A 1 6  ? 4.396  9.104  14.278 1.00 4.92 ? 6  DG A "C1'" 1 
ATOM 109 N N9    . DG A 1 6  ? 4.548  10.480 14.737 1.00 4.23 ? 6  DG A N9    1 
ATOM 110 C C8    . DG A 1 6  ? 3.728  11.535 14.417 1.00 4.02 ? 6  DG A C8    1 
ATOM 111 N N7    . DG A 1 6  ? 4.162  12.678 14.867 1.00 4.00 ? 6  DG A N7    1 
ATOM 112 C C5    . DG A 1 6  ? 5.331  12.359 15.544 1.00 3.64 ? 6  DG A C5    1 
ATOM 113 C C6    . DG A 1 6  ? 6.254  13.195 16.216 1.00 3.53 ? 6  DG A C6    1 
ATOM 114 O O6    . DG A 1 6  ? 6.241  14.424 16.321 1.00 3.22 ? 6  DG A O6    1 
ATOM 115 N N1    . DG A 1 6  ? 7.287  12.461 16.788 1.00 3.19 ? 6  DG A N1    1 
ATOM 116 C C2    . DG A 1 6  ? 7.423  11.097 16.710 1.00 3.10 ? 6  DG A C2    1 
ATOM 117 N N2    . DG A 1 6  ? 8.484  10.573 17.345 1.00 2.92 ? 6  DG A N2    1 
ATOM 118 N N3    . DG A 1 6  ? 6.583  10.306 16.061 1.00 3.32 ? 6  DG A N3    1 
ATOM 119 C C4    . DG A 1 6  ? 5.566  11.000 15.506 1.00 3.69 ? 6  DG A C4    1 
ATOM 120 P P     . DC A 1 7  ? 2.850  5.102  14.537 1.00 7.62 ? 7  DC A P     1 
ATOM 121 O OP1   . DC A 1 7  ? 3.297  3.774  14.040 1.00 7.53 ? 7  DC A OP1   1 
ATOM 122 O OP2   . DC A 1 7  ? 1.408  5.370  14.730 1.00 7.54 ? 7  DC A OP2   1 
ATOM 123 O "O5'" . DC A 1 7  ? 3.576  5.401  15.916 1.00 6.81 ? 7  DC A "O5'" 1 
ATOM 124 C "C5'" . DC A 1 7  ? 4.988  5.442  15.973 1.00 6.10 ? 7  DC A "C5'" 1 
ATOM 125 C "C4'" . DC A 1 7  ? 5.444  5.886  17.340 1.00 5.06 ? 7  DC A "C4'" 1 
ATOM 126 O "O4'" . DC A 1 7  ? 5.431  7.329  17.431 1.00 4.84 ? 7  DC A "O4'" 1 
ATOM 127 C "C3'" . DC A 1 7  ? 4.609  5.360  18.510 1.00 4.75 ? 7  DC A "C3'" 1 
ATOM 128 O "O3'" . DC A 1 7  ? 5.443  4.578  19.366 1.00 4.40 ? 7  DC A "O3'" 1 
ATOM 129 C "C2'" . DC A 1 7  ? 4.079  6.618  19.193 1.00 4.94 ? 7  DC A "C2'" 1 
ATOM 130 C "C1'" . DC A 1 7  ? 5.029  7.715  18.731 1.00 4.27 ? 7  DC A "C1'" 1 
ATOM 131 N N1    . DC A 1 7  ? 4.429  9.064  18.635 1.00 3.81 ? 7  DC A N1    1 
ATOM 132 C C2    . DC A 1 7  ? 5.113  10.152 19.191 1.00 3.37 ? 7  DC A C2    1 
ATOM 133 O O2    . DC A 1 7  ? 6.193  9.950  19.770 1.00 3.22 ? 7  DC A O2    1 
ATOM 134 N N3    . DC A 1 7  ? 4.584  11.394 19.083 1.00 3.06 ? 7  DC A N3    1 
ATOM 135 C C4    . DC A 1 7  ? 3.420  11.572 18.457 1.00 3.08 ? 7  DC A C4    1 
ATOM 136 N N4    . DC A 1 7  ? 2.948  12.819 18.363 1.00 3.11 ? 7  DC A N4    1 
ATOM 137 C C5    . DC A 1 7  ? 2.692  10.481 17.896 1.00 3.32 ? 7  DC A C5    1 
ATOM 138 C C6    . DC A 1 7  ? 3.230  9.255  18.005 1.00 3.65 ? 7  DC A C6    1 
ATOM 139 P P     . DT A 1 8  ? 4.792  3.553  20.421 1.00 3.44 ? 8  DT A P     1 
ATOM 140 O OP1   . DT A 1 8  ? 5.554  2.282  20.323 1.00 4.00 ? 8  DT A OP1   1 
ATOM 141 O OP2   . DT A 1 8  ? 3.312  3.527  20.301 1.00 4.46 ? 8  DT A OP2   1 
ATOM 142 O "O5'" . DT A 1 8  ? 5.175  4.239  21.801 1.00 3.14 ? 8  DT A "O5'" 1 
ATOM 143 C "C5'" . DT A 1 8  ? 6.525  4.625  22.045 1.00 2.48 ? 8  DT A "C5'" 1 
ATOM 144 C "C4'" . DT A 1 8  ? 6.601  5.568  23.221 1.00 1.80 ? 8  DT A "C4'" 1 
ATOM 145 O "O4'" . DT A 1 8  ? 6.110  6.878  22.855 1.00 1.64 ? 8  DT A "O4'" 1 
ATOM 146 C "C3'" . DT A 1 8  ? 5.783  5.136  24.439 1.00 1.68 ? 8  DT A "C3'" 1 
ATOM 147 O "O3'" . DT A 1 8  ? 6.510  5.468  25.620 1.00 1.62 ? 8  DT A "O3'" 1 
ATOM 148 C "C2'" . DT A 1 8  ? 4.557  6.027  24.359 1.00 1.67 ? 8  DT A "C2'" 1 
ATOM 149 C "C1'" . DT A 1 8  ? 5.187  7.302  23.841 1.00 1.49 ? 8  DT A "C1'" 1 
ATOM 150 N N1    . DT A 1 8  ? 4.294  8.286  23.221 1.00 1.53 ? 8  DT A N1    1 
ATOM 151 C C2    . DT A 1 8  ? 4.673  9.604  23.307 1.00 1.58 ? 8  DT A C2    1 
ATOM 152 O O2    . DT A 1 8  ? 5.681  9.967  23.894 1.00 1.84 ? 8  DT A O2    1 
ATOM 153 N N3    . DT A 1 8  ? 3.834  10.483 22.675 1.00 1.69 ? 8  DT A N3    1 
ATOM 154 C C4    . DT A 1 8  ? 2.680  10.179 21.981 1.00 1.55 ? 8  DT A C4    1 
ATOM 155 O O4    . DT A 1 8  ? 2.041  11.075 21.449 1.00 1.81 ? 8  DT A O4    1 
ATOM 156 C C5    . DT A 1 8  ? 2.330  8.774  21.944 1.00 1.59 ? 8  DT A C5    1 
ATOM 157 C C7    . DT A 1 8  ? 1.091  8.351  21.221 1.00 1.33 ? 8  DT A C7    1 
ATOM 158 C C6    . DT A 1 8  ? 3.142  7.911  22.564 1.00 1.48 ? 8  DT A C6    1 
ATOM 159 P P     . DG A 1 9  ? 7.313  4.327  26.406 1.00 1.98 ? 9  DG A P     1 
ATOM 160 O OP1   . DG A 1 9  ? 8.116  3.573  25.410 1.00 2.69 ? 9  DG A OP1   1 
ATOM 161 O OP2   . DG A 1 9  ? 6.362  3.599  27.281 1.00 2.72 ? 9  DG A OP2   1 
ATOM 162 O "O5'" . DG A 1 9  ? 8.287  5.166  27.345 1.00 2.40 ? 9  DG A "O5'" 1 
ATOM 163 C "C5'" . DG A 1 9  ? 9.384  5.888  26.788 1.00 2.02 ? 9  DG A "C5'" 1 
ATOM 164 C "C4'" . DG A 1 9  ? 9.623  7.161  27.565 1.00 1.47 ? 9  DG A "C4'" 1 
ATOM 165 O "O4'" . DG A 1 9  ? 8.559  8.107  27.322 1.00 1.53 ? 9  DG A "O4'" 1 
ATOM 166 C "C3'" . DG A 1 9  ? 9.694  6.990  29.077 1.00 1.40 ? 9  DG A "C3'" 1 
ATOM 167 O "O3'" . DG A 1 9  ? 10.669 7.906  29.578 1.00 1.30 ? 9  DG A "O3'" 1 
ATOM 168 C "C2'" . DG A 1 9  ? 8.278  7.313  29.533 1.00 1.08 ? 9  DG A "C2'" 1 
ATOM 169 C "C1'" . DG A 1 9  ? 7.792  8.325  28.500 1.00 1.33 ? 9  DG A "C1'" 1 
ATOM 170 N N9    . DG A 1 9  ? 6.391  8.217  28.104 1.00 1.17 ? 9  DG A N9    1 
ATOM 171 C C8    . DG A 1 9  ? 5.587  7.100  28.114 1.00 1.36 ? 9  DG A C8    1 
ATOM 172 N N7    . DG A 1 9  ? 4.411  7.312  27.585 1.00 1.21 ? 9  DG A N7    1 
ATOM 173 C C5    . DG A 1 9  ? 4.433  8.653  27.229 1.00 1.08 ? 9  DG A C5    1 
ATOM 174 C C6    . DG A 1 9  ? 3.445  9.459  26.598 1.00 1.09 ? 9  DG A C6    1 
ATOM 175 O O6    . DG A 1 9  ? 2.325  9.128  26.187 1.00 1.00 ? 9  DG A O6    1 
ATOM 176 N N1    . DG A 1 9  ? 3.879  10.774 26.450 1.00 1.09 ? 9  DG A N1    1 
ATOM 177 C C2    . DG A 1 9  ? 5.105  11.251 26.845 1.00 1.14 ? 9  DG A C2    1 
ATOM 178 N N2    . DG A 1 9  ? 5.341  12.552 26.633 1.00 1.31 ? 9  DG A N2    1 
ATOM 179 N N3    . DG A 1 9  ? 6.036  10.507 27.412 1.00 1.00 ? 9  DG A N3    1 
ATOM 180 C C4    . DG A 1 9  ? 5.636  9.230  27.574 1.00 1.00 ? 9  DG A C4    1 
ATOM 181 P P     . DG A 1 10 ? 11.137 7.824  31.107 1.00 1.00 ? 10 DG A P     1 
ATOM 182 O OP1   . DG A 1 10 ? 12.509 8.393  31.154 1.00 1.67 ? 10 DG A OP1   1 
ATOM 183 O OP2   . DG A 1 10 ? 10.883 6.467  31.657 1.00 1.63 ? 10 DG A OP2   1 
ATOM 184 O "O5'" . DG A 1 10 ? 10.165 8.858  31.825 1.00 1.91 ? 10 DG A "O5'" 1 
ATOM 185 C "C5'" . DG A 1 10 ? 10.219 10.234 31.476 1.00 2.43 ? 10 DG A "C5'" 1 
ATOM 186 C "C4'" . DG A 1 10 ? 8.997  10.965 31.977 1.00 2.99 ? 10 DG A "C4'" 1 
ATOM 187 O "O4'" . DG A 1 10 ? 7.816  10.599 31.221 1.00 2.64 ? 10 DG A "O4'" 1 
ATOM 188 C "C3'" . DG A 1 10 ? 8.651  10.746 33.453 1.00 3.27 ? 10 DG A "C3'" 1 
ATOM 189 O "O3'" . DG A 1 10 ? 8.621  11.986 34.150 1.00 4.34 ? 10 DG A "O3'" 1 
ATOM 190 C "C2'" . DG A 1 10 ? 7.277  10.098 33.420 1.00 3.17 ? 10 DG A "C2'" 1 
ATOM 191 C "C1'" . DG A 1 10 ? 6.714  10.612 32.109 1.00 2.17 ? 10 DG A "C1'" 1 
ATOM 192 N N9    . DG A 1 10 ? 5.642  9.794  31.547 1.00 1.85 ? 10 DG A N9    1 
ATOM 193 C C8    . DG A 1 10 ? 5.477  8.435  31.686 1.00 1.55 ? 10 DG A C8    1 
ATOM 194 N N7    . DG A 1 10 ? 4.391  7.989  31.113 1.00 1.14 ? 10 DG A N7    1 
ATOM 195 C C5    . DG A 1 10 ? 3.807  9.118  30.555 1.00 1.60 ? 10 DG A C5    1 
ATOM 196 C C6    . DG A 1 10 ? 2.605  9.258  29.815 1.00 1.34 ? 10 DG A C6    1 
ATOM 197 O O6    . DG A 1 10 ? 1.793  8.380  29.492 1.00 1.71 ? 10 DG A O6    1 
ATOM 198 N N1    . DG A 1 10 ? 2.386  10.579 29.440 1.00 1.70 ? 10 DG A N1    1 
ATOM 199 C C2    . DG A 1 10 ? 3.217  11.632 29.736 1.00 1.79 ? 10 DG A C2    1 
ATOM 200 N N2    . DG A 1 10 ? 2.835  12.834 29.288 1.00 1.78 ? 10 DG A N2    1 
ATOM 201 N N3    . DG A 1 10 ? 4.341  11.516 30.424 1.00 1.91 ? 10 DG A N3    1 
ATOM 202 C C4    . DG A 1 10 ? 4.572  10.239 30.802 1.00 1.63 ? 10 DG A C4    1 
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